Citrus Sinensis ID: 020924

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGILN
Secondary Structure (PSIPRED)
ccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHccccccccEEEEccccccccHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEcccccEEEccccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHcccHHHccccccccEEHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHccccccccccccccccEEccHHHHHccccccccHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEcccHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHccccHHHcEEEEHcHcccccHHHHHcccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHEEEccccccccccccccccccHHHHHHcccEHHHHccHHHHHHcHHHHHHHHHHHHEcccEEEcccccccccHHHHHHHHHHcccHHHHHHHHccEEcHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccEEcHHHHHHccccEccHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MALEKERVCVTGAGGFLASWVVKLLLSRdyfvhgtarepsdeknARLYELEKASENLKLFKADlldydsvksAIVGCNgvfhiacpapsttvpnpqmellepaVKGTLNVVKACLEAKVKRVIVVSSGvavglnprwpkgqimdetcwsdkeycrttnnwyclSKTEAESEALEfgkktgldvvticpnlvlgpllqskvnTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLkslypnynypksftekedeVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGILN
Flexible Loop (DISEMBL)
malekervcvtgaggfLASWVVKLLLSRDYFVhgtarepsdeknARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSsgvavglnprwpkgqimdetCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNypksftekedevMLTSEKLqklgwsyrsleetlvdsvesykkvgiln
Low Complexity Region (SEG)
MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVaealllayekaeaeGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGILN
Disordered region (IsUnstruct)
******RVCVTGAGGFLASWVVKLLLSRDYFVHGT************YELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE***EVMLTSEKLQKLGWSYRSLEETLVDSV**********
Disordered Region (DISOPRED)
*****ER**VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGILN
Disordered Region (DISEMBL)
MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGILN
Disordered Region (DISPRO)
****KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMxxxxxxxxxxxxxxxxxxxxxGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGILN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	0.981	0.942	0.422	3e-62
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.959	0.889	0.428	2e-61
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.993	0.972	0.401	3e-58
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.990	0.908	0.370	7e-53
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.990	0.910	0.366	2e-52
P51110	337	Dihydroflavonol-4-reducta	no	no	0.984	0.931	0.370	4e-52
P51102	382	Dihydroflavonol-4-reducta	no	no	0.981	0.819	0.369	4e-51
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.952	0.858	0.364	1e-49
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.971	0.861	0.355	1e-47
Q9CA28	321	Tetraketide alpha-pyrone	no	no	0.968	0.962	0.341	7e-47

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  238 bits (608), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 196/322 (60%), Gaps = 9/322 (2%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           M ++ + VCVTGAGG++ASW+VKLLL R Y V GT R P+D KN  L EL+ A E L L 
Sbjct: 1   MLVDGKLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLH 60

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
            ADLLDY+++ + I GC+GVFH A P       +P+  +LEPAV G   V+ A  +AKVK
Sbjct: 61  SADLLDYEALCATIDGCDGVFHTASP----MTDDPET-MLEPAVNGAKFVIDAAAKAKVK 115

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
           RV+  SS  AV +NP      I+DE CWSD ++C+ T NWYC  K  AE  A E  K  G
Sbjct: 116 RVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKG 175

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE 240
           +D+V + P LVLGP LQS +N S + ++K L    ++  N  ++ VDVRDVA   +L YE
Sbjct: 176 VDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYE 235

Query: 241 KAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKED----EVMLTSEKLQKLGW 296
              A GRYI     +   ++V+ L   +P Y  P   +++++        T++K++ LG 
Sbjct: 236 APSASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGL 295

Query: 297 SYRSLEETLVDSVESYKKVGIL 318
            ++ ++++L +SV+S ++ G L
Sbjct: 296 EFKPIKQSLYESVKSLQEKGHL 317

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 4

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  236 bits (601), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/315 (42%), Positives = 191/315 (60%), Gaps = 9/315 (2%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           VCVTGAGG++ASW+VK+LL R Y V GT R P D KN  L ELE   E L L KADL DY
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
           +++K+AI GC+GVFH A P     V +   +++EPAV G   V+ A  EAKVKRV++ SS
Sbjct: 73  EALKAAIDGCDGVFHTASP-----VTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query: 128 GVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTIC 187
             AV ++P      ++DE+CWSD ++C+ T NWYC  K  AE  A E  K+ G+D+V + 
Sbjct: 128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 188 PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGR 247
           P LVLGP LQ  +N S   ++K L    ++  N  +  VDVRDVA A +L YE   A GR
Sbjct: 188 PVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGR 247

Query: 248 YICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKED----EVMLTSEKLQKLGWSYRSLEE 303
           Y+         ++V+ L  L+P Y  P    ++++        T++K++ LG  + S ++
Sbjct: 248 YLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQ 307

Query: 304 TLVDSVESYKKVGIL 318
           +L D+V+S ++ G L
Sbjct: 308 SLYDTVKSLQEKGHL 322

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  225 bits (574), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 196/324 (60%), Gaps = 7/324 (2%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKL 59
           M   K +VCVTGA GFLASW+VK LL   Y V GT R+P +EK  A L++LE A E L+L
Sbjct: 1   MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AK 118
            KADL++  S  +AI+GC GVFH A P    T  NP+ E+L PA++GTLNV+++C +   
Sbjct: 61  VKADLMEEGSFDNAIMGCQGVFHTASPVLKPT-SNPEEEILRPAIEGTLNVLRSCRKNPS 119

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK 178
           +KRV++ SS   V +   +     +DE+ W+  E C+    WY LSKT AE  A +F ++
Sbjct: 120 LKRVVLTSSSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEE 179

Query: 179 TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM-IVDVRDVAEALLL 237
            G+D+VT+ P+ ++GP L   + +++  ++ LLK   E  +   +M  V + DVA   ++
Sbjct: 180 NGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVARTHIV 239

Query: 238 AYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVM--LTSEKLQKLG 295
            +E   A+GRYIC++++I   +LV  L + YP+   PK F EK + +     + K+Q LG
Sbjct: 240 VFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRF-EKLNRLHYDFDTSKIQSLG 298

Query: 296 WSYRSLEETLVDSVESYKKVGILN 319
             ++SLEE   D + S  + G L+
Sbjct: 299 LKFKSLEEMFDDCIASLVEQGYLS 322

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  207 bits (528), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/327 (37%), Positives = 188/327 (57%), Gaps = 11/327 (3%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKL 59
           M  E E VCVTGA GF+ SW+V  LL   Y V  T R+P+++K  + L +L KA  +L L
Sbjct: 1   MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
           +KADL D  S   AI GC+GVFH+A P    +  +P+ E+++P + G L+++KAC +AK 
Sbjct: 61  WKADLADEGSFDEAIQGCSGVFHVATPMDFES-KDPENEVIKPTINGLLDILKACQKAKT 119

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT--NNW-YCLSKTEAESEALEFG 176
            R +V +S     +N    +  + DE+ WSD E+CR+     W Y +SKT AE  A ++ 
Sbjct: 120 VRKLVFTSSAGT-VNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYA 178

Query: 177 KKTGLDVVTICPNLVLGPLLQSKVNTSSLV-LIKLLKEGYESLENKLRMIVDVRDVAEAL 235
           K+  +D +TI P LV+GP L   +  S +  L  +L+        K    V + D+  + 
Sbjct: 179 KENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSH 238

Query: 236 LLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE---VMLTSEKLQ 292
           +  YE  +AEGRYIC++H     +LV  L+  YP YN P  F   +D    V  +S+KL+
Sbjct: 239 IYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLR 298

Query: 293 KLGWSYR-SLEETLVDSVESYKKVGIL 318
           ++G+ ++ SLE+  V +V++ +  G++
Sbjct: 299 EIGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  206 bits (524), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 188/327 (57%), Gaps = 11/327 (3%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKL 59
           M  E E VCVTGA GF+ SW+V  LL   Y V  T R+P+++K  + L +L KA  +L L
Sbjct: 1   MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
           +KADL D  S   AI GC+GVFH+A P    +  +P+ E+++P + G L+++KAC +AK 
Sbjct: 61  WKADLADEGSFDEAIQGCSGVFHVATPMDFESR-DPENEVIKPTINGLLDILKACQKAKT 119

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT--NNW-YCLSKTEAESEALEFG 176
            R +V +S     +N    +  + DE+ WSD E+CR+     W Y +SKT AE  A ++ 
Sbjct: 120 VRKLVFTSSAGT-VNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYA 178

Query: 177 KKTGLDVVTICPNLVLGPLLQSKVNTSSLV-LIKLLKEGYESLENKLRMIVDVRDVAEAL 235
           K+  +D +TI P LV+GP L   +  S +  L  +L+        K    V + D+  + 
Sbjct: 179 KENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSH 238

Query: 236 LLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE---VMLTSEKLQ 292
           +  Y+  +AEGRYIC++H     +LV  L+  YP YN P  F   +D    V  +S+KL+
Sbjct: 239 IYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLR 298

Query: 293 KLGWSYR-SLEETLVDSVESYKKVGIL 318
           ++G+ ++ SLE+  V +V++ +  G++
Sbjct: 299 EIGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  205 bits (521), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/329 (37%), Positives = 186/329 (56%), Gaps = 15/329 (4%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKL 59
           M  + E VCVTGA GF+ SW+V  LL R   V  T R+P++ K  + L +L KA  +L L
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK- 118
           +KADL D  S   AI GC GVFH+A P    +  +P+ E+++P ++G L ++K+C  AK 
Sbjct: 61  WKADLADEGSFDEAIKGCTGVFHVATPMDFES-KDPENEVIKPTIEGMLGIMKSCAAAKT 119

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT--TNNW-YCLSKTEAESEALEF 175
           V+R++  SS   V +     +  + DE+CWSD E+CR      W Y +SKT AE  A ++
Sbjct: 120 VRRLVFTSSAGTVNIQEH--QLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKY 177

Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR--MIVDVRDVAE 233
            K+  +D +TI P LV+GP + S +  S +  +  +  G E+  + +R    V + D+  
Sbjct: 178 AKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPIT-GNEAHYSIIRQGQFVHLDDLCN 236

Query: 234 ALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSF---TEKEDEVMLTSEK 290
           A +  +E  +AEGRYIC++H     DL   L+  YP YN P  F    E    V  +S+K
Sbjct: 237 AHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKK 296

Query: 291 LQKLGWSYR-SLEETLVDSVESYKKVGIL 318
           L  LG+ ++ SLE+    +V++ +  G+L
Sbjct: 297 LTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  202 bits (513), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/330 (36%), Positives = 191/330 (57%), Gaps = 17/330 (5%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKL 59
           M  +KE VCVTGA GF+ SW+V  LL R YFV  T R+P + K  + L +L  A   L L
Sbjct: 1   MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK- 118
           +KADL +  S   AI GC+GVFH+A P    +  +P+ E+++P V G L ++KAC++AK 
Sbjct: 61  WKADLSEEGSYDDAINGCDGVFHVATPMDFES-KDPENEVIKPTVNGMLGIMKACVKAKT 119

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY--CRTTNNW-YCLSKTEAESEALEF 175
           V+R +  SS   V +     +  + DE  WSD E+   +    W Y +SKT AE  A +F
Sbjct: 120 VRRFVFTSSAGTVNVEEH--QKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDF 177

Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL--KEGYESLENKLRMIVDVRDVAE 233
            ++ GLD ++I P LV+GP + + +  S +  +  +   E + S+  + +  V + D+  
Sbjct: 178 AEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQY-VHLDDLCN 236

Query: 234 ALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE----VMLTSE 289
           A +  YE+A A+GRYIC++H      +   L+  YP YN P +F E  DE    +  +S+
Sbjct: 237 AHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTF-EGVDENLKSIEFSSK 295

Query: 290 KLQKLGWSYR-SLEETLVDSVESYKKVGIL 318
           KL  +G++++ SLEE  ++S+E+ ++ G L
Sbjct: 296 KLTDMGFNFKYSLEEMFIESIETCRQKGFL 325

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  197 bits (500), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/318 (36%), Positives = 180/318 (56%), Gaps = 14/318 (4%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKL 59
           M   K  V VTGA GF+ SW+V  LL   Y V  T R+P++ EK   L EL  A E L +
Sbjct: 1   MDGNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSI 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-K 118
           +KADL +  S   AI GC GVFH+A P    +  +P+ E+++P V+G L++++AC EA  
Sbjct: 61  WKADLSEDGSFNEAIAGCTGVFHVATPMDFDS-QDPENEVIKPTVEGMLSIMRACKEAGT 119

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT--NNW-YCLSKTEAESEALEF 175
           VKR++  SS  +V +  R P+    D+  WSD +YCR      W Y +SK  AE  A+E+
Sbjct: 120 VKRIVFTSSAGSVNIEER-PR-PAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEY 177

Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL--KEGYESLENKLRMIVDVRDVAE 233
             + GLD ++I P LV+GP L + +  S +  + L+   E + S+  ++++ V + D+ +
Sbjct: 178 ASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQL-VHLDDLCD 236

Query: 234 ALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE---VMLTSEK 290
           A+   +E  EA GRYIC++H      L   L+  +P Y+ P+ F   +D    +  +S+K
Sbjct: 237 AMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSKK 296

Query: 291 LQKLGWSYRSLEETLVDS 308
           L   G+S+R   E + D+
Sbjct: 297 LLDHGFSFRYTTEDMFDA 314

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  190 bits (482), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 182/326 (55%), Gaps = 16/326 (4%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKLFKA 62
           + E VCVTGA GF+ SW++  LL R Y V  T R+P + K  + L +L  A  NL L+KA
Sbjct: 21  QGETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKA 80

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           DL +  S  +A+ GC GVFHIA P    +  +P+ E+++P + G L+++K+C++AK++RV
Sbjct: 81  DLHEEGSFDAAVDGCTGVFHIATPMDFES-KDPENEMIKPTINGMLDILKSCVKAKLRRV 139

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT--NNW-YCLSKTEAESEALEFGKKT 179
           +  SSG  V  N    +  + DETCWS  ++ R+     W Y +SK  AE  A ++  + 
Sbjct: 140 VFTSSGGTV--NVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAEN 197

Query: 180 GLDVVTICPNLVLGPLLQSKVNTS---SLVLIKLLKEGYESLENKLRMIVDVRDVAEALL 236
            L+ ++I P LV+GP +   +  S   +L  I   +  Y  +  K    V + D+  + +
Sbjct: 198 NLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTII--KQGQFVHLDDLCMSHI 255

Query: 237 LAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE-KED--EVMLTSEKLQK 293
             YE  +A GRYI +A      D+   L+  YP YN P  F + KED  +V  +S+KL  
Sbjct: 256 FLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDMGQVQFSSKKLTD 315

Query: 294 LGWSYR-SLEETLVDSVESYKKVGIL 318
           LG+ ++  L++    +VES +  G+L
Sbjct: 316 LGFEFKYGLKDMYTAAVESCRAKGLL 341

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=2 SV=1

 Score =  187 bits (476), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/316 (34%), Positives = 179/316 (56%), Gaps = 7/316 (2%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-KNARLYELEKASENLKLFKADLLDYD 68
           VTG  GF+AS+++K LL   + V  T R P DE K   L+E + A + LK+ +ADL    
Sbjct: 6   VTGGTGFIASYIIKSLLELGHTVRTTVRNPRDEEKVGFLWEFQGAKQRLKILQADLTVEG 65

Query: 69  SVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVS 126
           S   A+ G +GVFH A P       N Q  L++P +KGT NV+ +C ++K  +KR+++ S
Sbjct: 66  SFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKRIVLTS 125

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S  ++       +   ++E+ WSD EYC+  N WY  +KT  E EA    ++ GLD+V +
Sbjct: 126 SCSSIRYRFDATEASPLNESHWSDPEYCKRFNLWYGYAKTLGEREAWRIAEEKGLDLVVV 185

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
            P+ V+GPLL  K  ++ L+++ + K       N     V + DV  A +LA E+ +A G
Sbjct: 186 NPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLAMEEPKASG 245

Query: 247 RYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE---VMLTSEKLQKLGW-SYRSLE 302
           R IC++ +    ++++ +++ YPNY +    + KE +     + + K+ +LG+ S++SL 
Sbjct: 246 RIICSSSVAHWSEIIELMRNKYPNYPFENKCSNKEGDNSPHSMDTRKIHELGFGSFKSLP 305

Query: 303 ETLVDSVESYKKVGIL 318
           E   D + S++K G+L
Sbjct: 306 EMFDDCIISFQKKGLL 321

May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
224061829	319	predicted protein [Populus trichocarpa]	1.0	1.0	0.746	1e-138
225457658	318	PREDICTED: bifunctional dihydroflavonol	0.990	0.993	0.762	1e-135
225457654	319	PREDICTED: bifunctional dihydroflavonol	0.990	0.990	0.750	1e-130
255539330	320	cinnamoyl-CoA reductase, putative [Ricin	1.0	0.996	0.709	1e-129
388516021	326	unknown [Medicago truncatula]	0.981	0.960	0.670	1e-126
449455647	319	PREDICTED: cinnamoyl-CoA reductase 2-lik	0.993	0.993	0.670	1e-122
15226134	321	Rossmann-fold NAD(P)-binding domain-cont	0.993	0.987	0.663	1e-120
255539332	319	cinnamoyl-CoA reductase, putative [Ricin	0.962	0.962	0.661	1e-120
357458847	326	Dihydroflavonol-4-reductase [Medicago tr	0.981	0.960	0.674	1e-120
297823153	321	predicted protein [Arabidopsis lyrata su	0.993	0.987	0.663	1e-119

>gi|224061829|ref|XP_002300619.1| predicted protein [Populus trichocarpa] gi|222842345|gb|EEE79892.1| predicted protein [Populus trichocarpa]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/319 (74%), Positives = 277/319 (86%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           MA EK RVCVTGAGGFL SW++K+LLS++Y VHGT R+P+DEK A    ++KASENLKLF
Sbjct: 1   MAAEKGRVCVTGAGGFLGSWLLKVLLSKNYLVHGTVRDPADEKYAHWKTIDKASENLKLF 60

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
           KADLLDY+S+ SAI GC GVFH+A P PSTTVPNP+ +L+EPAVKGTLNV++AC EAKVK
Sbjct: 61  KADLLDYNSLCSAIKGCEGVFHVASPVPSTTVPNPEAKLIEPAVKGTLNVLRACDEAKVK 120

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
           RV++VSS VAV +NP  PKGQ+MDE  WSDKEYCR T NWYCLSKTEAESEA E  K++G
Sbjct: 121 RVVIVSSMVAVCMNPSLPKGQVMDENWWSDKEYCRATKNWYCLSKTEAESEAWECAKRSG 180

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE 240
           LDVVTICP+L+LGP+L S VN SS VLIKLLKEGYESLENKLR +VDVRDVAEALLL YE
Sbjct: 181 LDVVTICPSLILGPILHSAVNASSKVLIKLLKEGYESLENKLRHLVDVRDVAEALLLVYE 240

Query: 241 KAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRS 300
           K EAEGRYICTAH IR  DLV+KL+++YPNYNYPKSFTE+E+ + L+SEKLQ+LGWSYR 
Sbjct: 241 KPEAEGRYICTAHEIRTEDLVEKLRNIYPNYNYPKSFTEEEEGINLSSEKLQRLGWSYRP 300

Query: 301 LEETLVDSVESYKKVGILN 319
           LEETL+DSVESY+K GIL+
Sbjct: 301 LEETLIDSVESYQKTGILD 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457658|ref|XP_002275562.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|297745607|emb|CBI40772.3| unnamed protein product [Vitis vinifera]

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/316 (76%), Positives = 280/316 (88%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
           EK RVCVTGAGG++ASWVVKLLLS+ Y VHGT R+PSDEKNA L +LEKASENLKLFKAD
Sbjct: 3   EKGRVCVTGAGGYIASWVVKLLLSKGYIVHGTVRDPSDEKNAHLKKLEKASENLKLFKAD 62

Query: 64  LLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
           LL+Y ++ SA  GC+GVFH A P P TTV NP++EL+EPAVKGTLNV+KAC EAKVKRV+
Sbjct: 63  LLEYGALCSAFEGCDGVFHTASPVPPTTVANPEVELMEPAVKGTLNVLKACAEAKVKRVV 122

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
           VVSSG +V +NPRWPKG++MDETCWSDKEYCR T NWYCLSKTEAES A E+ K +GLDV
Sbjct: 123 VVSSGASVIMNPRWPKGKVMDETCWSDKEYCRATKNWYCLSKTEAESVAFEYAKTSGLDV 182

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE 243
           VT+CP LVLGP+LQS +N SSLVLIK+LKEGYE+LENK RMIVDVRDVA+ALL+ YEK E
Sbjct: 183 VTVCPTLVLGPILQSTINASSLVLIKILKEGYETLENKFRMIVDVRDVADALLITYEKPE 242

Query: 244 AEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEE 303
           AEGRYICTAHMI+ARDLV+KL+S+YPNYNYPK+FTE E+   L+SEKLQKLGWSYR LEE
Sbjct: 243 AEGRYICTAHMIKARDLVEKLRSIYPNYNYPKNFTEVEEVENLSSEKLQKLGWSYRPLEE 302

Query: 304 TLVDSVESYKKVGILN 319
           +LVDS++SYK+ GIL+
Sbjct: 303 SLVDSIKSYKEAGILD 318

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457654|ref|XP_002275693.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|297745605|emb|CBI40770.3| unnamed protein product [Vitis vinifera]

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/317 (75%), Positives = 278/317 (87%), Gaps = 1/317 (0%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
           EK +VCVTGAGG++ASWVVKLLLS+ Y VHGT REPSD K + L +LEKAS NLKLFKAD
Sbjct: 3   EKGKVCVTGAGGYVASWVVKLLLSKGYIVHGTVREPSDGKYSHLKKLEKASGNLKLFKAD 62

Query: 64  LLDYDSVKSAIVGCNGVFHIACPAPSTTV-PNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           LL+Y+++ SAI GC+GVFH+A P P TTV PNP++EL+EPAVKGTLNV+KAC EAKVKRV
Sbjct: 63  LLEYNTLCSAIAGCDGVFHVASPVPPTTVVPNPEVELMEPAVKGTLNVLKACTEAKVKRV 122

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
           +VVSSG AV  NPRWPKG++ DETCWSDKEYCRTT NWYCLSKTEAE+EA E+ KK+GLD
Sbjct: 123 VVVSSGSAVMRNPRWPKGKVKDETCWSDKEYCRTTENWYCLSKTEAETEAFEYAKKSGLD 182

Query: 183 VVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA 242
           VV +CP LVLGP+LQS +N SSLVLIKLLKEGYESLENK RMIVD RDVAEALLLAYE+ 
Sbjct: 183 VVRVCPTLVLGPILQSTINASSLVLIKLLKEGYESLENKHRMIVDARDVAEALLLAYEQP 242

Query: 243 EAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLE 302
           EAEGRYICTAHMI+ +DLV+ L+S+YP YNYPK+FTE E+   L+SEKLQ+LGW+YR LE
Sbjct: 243 EAEGRYICTAHMIKMQDLVENLRSIYPYYNYPKNFTEGEETENLSSEKLQRLGWNYRPLE 302

Query: 303 ETLVDSVESYKKVGILN 319
           ETLVDS++SYK+ GIL+
Sbjct: 303 ETLVDSIKSYKEAGILD 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539330|ref|XP_002510730.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223551431|gb|EEF52917.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/320 (70%), Positives = 278/320 (86%), Gaps = 1/320 (0%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           MA  K ++CVTGAGG+L SWVV+LLLS+DY V GT R+P D+K A L +L+KAS+NLKL 
Sbjct: 1   MAATKGKLCVTGAGGYLGSWVVQLLLSKDYIVRGTVRDPKDKKYAHLSKLDKASDNLKLV 60

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
           KADLLDY+S+ +AI GC GVFH+A P PSTTVPNP++E+LEPA+KGT NV+KAC EAKVK
Sbjct: 61  KADLLDYNSLNAAIQGCTGVFHVASPVPSTTVPNPEVEVLEPAIKGTQNVLKACAEAKVK 120

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
           RV+VVSSG A+ +NP WPK ++MDETCWS+KEYCRTT NWYCLSKT AE+EA E+ +++G
Sbjct: 121 RVVVVSSGAAIFMNPSWPKSKMMDETCWSNKEYCRTTKNWYCLSKTVAETEAFEYAEQSG 180

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE 240
           LDVVT+CP L+LGP+LQS VN SSLVL+KLLK GYESLENKLR+IVDVRDVAEAL L YE
Sbjct: 181 LDVVTVCPTLILGPILQSTVNASSLVLVKLLKGGYESLENKLRLIVDVRDVAEALALVYE 240

Query: 241 KAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEK-EDEVMLTSEKLQKLGWSYR 299
           K EAEGRYICTAH I+ RDLV+KL+SLYP+Y+YP SFTE+ E++++L+SEKLQ+LGW+ R
Sbjct: 241 KPEAEGRYICTAHAIKTRDLVEKLRSLYPDYSYPNSFTEEGEEDLVLSSEKLQRLGWNTR 300

Query: 300 SLEETLVDSVESYKKVGILN 319
           SLEET+ DSV+SY+K GIL 
Sbjct: 301 SLEETIADSVQSYQKAGILG 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516021|gb|AFK46072.1| unknown [Medicago truncatula]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 210/313 (67%), Positives = 259/313 (82%)

Query: 6   ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
           ++VCVTGAGGF+ASW+VKLLLS+ YFVHGT REP   K   L +LEKASENL LFKAD+L
Sbjct: 11  KKVCVTGAGGFVASWLVKLLLSKGYFVHGTVREPGSPKYEHLLKLEKASENLTLFKADIL 70

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           DY+SV SAIVGC+ VFH+A P PST VPNP++E++EPAVKGT NV++ACL+A V+RV+ V
Sbjct: 71  DYESVYSAIVGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTANVLEACLKANVERVVFV 130

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVT 185
           SS  AV +NP  PK + +DE+CWSDK+YC+ T NWYC +KTEAE +A  F K+TGL+VVT
Sbjct: 131 SSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQAFNFAKRTGLNVVT 190

Query: 186 ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE 245
           ICP LVLGP+LQS  N+SSL LIK+LKEG++SLENKLR IVDVRDV  A+LLAYE  +A+
Sbjct: 191 ICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDVVNAILLAYENHKAD 250

Query: 246 GRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETL 305
           GRYICT+H I  RDLV++LKS+YPNY YP ++ E +D  ML+SEKLQ LGW +R LEETL
Sbjct: 251 GRYICTSHTINTRDLVERLKSIYPNYKYPTNYIEMDDYKMLSSEKLQSLGWKFRPLEETL 310

Query: 306 VDSVESYKKVGIL 318
           +DSVESYK+ G+L
Sbjct: 311 IDSVESYKEAGLL 323

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455647|ref|XP_004145563.1| PREDICTED: cinnamoyl-CoA reductase 2-like [Cucumis sativus] gi|449485070|ref|XP_004157062.1| PREDICTED: cinnamoyl-CoA reductase 2-like [Cucumis sativus]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/319 (67%), Positives = 267/319 (83%), Gaps = 2/319 (0%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           MA+ K +VCVTGAGGF+ASWVVKLLLSRDY VHGT REPSD K A L + +KA+ENL+LF
Sbjct: 1   MAM-KGKVCVTGAGGFIASWVVKLLLSRDYIVHGTVREPSDAKYAHLTKFDKANENLQLF 59

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
           KADLLDY S+++AI GC+GVFH+ACP PSTT  NP+ E++ PAVKGT NV++AC+EAK+K
Sbjct: 60  KADLLDYQSLRTAIAGCDGVFHVACPVPSTTSSNPETEVIGPAVKGTHNVLEACVEAKIK 119

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
           RV+VVSS  AV  NP WP+ ++MDE+CWSD E+CR + +WY L+KT+AESEALEFG++ G
Sbjct: 120 RVVVVSSVAAVFSNPSWPRSRVMDESCWSDTEHCRASKDWYFLAKTKAESEALEFGRRCG 179

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE 240
           LDVVTICP LV+GP+LQ  VN S+LVL+++LKEG ES+EN+ RM+VDVRDVAEAL+L YE
Sbjct: 180 LDVVTICPTLVIGPVLQPTVNASTLVLLRILKEGSESMENRQRMLVDVRDVAEALILLYE 239

Query: 241 KAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE-KEDEVMLTSEKLQKLGWSYR 299
           K EAEGRYICTAH I  R+LVD LKS YP+Y+YPK  +E K + + L+SEKLQ+LGW YR
Sbjct: 240 KREAEGRYICTAHSIETRELVDALKSKYPDYSYPKKLSEWKAEPISLSSEKLQRLGWKYR 299

Query: 300 SLEETLVDSVESYKKVGIL 318
            LEETL D+V+S+K  G+L
Sbjct: 300 PLEETLADAVQSFKDAGML 318

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226134|ref|NP_180917.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|2459446|gb|AAB80681.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|21536817|gb|AAM61149.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|21539439|gb|AAM53272.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|23197694|gb|AAN15374.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|330253763|gb|AEC08857.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/318 (66%), Positives = 262/318 (82%), Gaps = 1/318 (0%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
           + K +VCVTGAGGFL SWVV LLLS+DYFVHGT R+P +EK A L +LEKA + LKLFKA
Sbjct: 4   VHKGKVCVTGAGGFLGSWVVDLLLSKDYFVHGTVRDPDNEKYAHLKKLEKAGDKLKLFKA 63

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           DLLDY S++SAI GC+GVFH+ACP P  +VPNP++EL+ PAV GTLNV+KAC+EA VKRV
Sbjct: 64  DLLDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEANVKRV 123

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
           + VSS  A  +NP W K Q++DE CWSD+EYC+ T NWYCL+KT AESEA EF K+TGL 
Sbjct: 124 VYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTENWYCLAKTRAESEAFEFAKRTGLH 183

Query: 183 VVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK 241
           +V++CP LVLGP+LQ   VN SSLVL+KLLKEG+E+ +N+ R +VDVRDVA+ALLL YEK
Sbjct: 184 LVSVCPTLVLGPILQQNTVNASSLVLLKLLKEGFETRDNQERHLVDVRDVAQALLLVYEK 243

Query: 242 AEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSL 301
           AEAEGRYICT+H ++   +V+KLKS YP+YNYPK + + ED V ++SEKLQKLGW+YR L
Sbjct: 244 AEAEGRYICTSHTVKEEIVVEKLKSFYPHYNYPKKYIDAEDRVKVSSEKLQKLGWTYRPL 303

Query: 302 EETLVDSVESYKKVGILN 319
           EETLVDSVESY+K  +++
Sbjct: 304 EETLVDSVESYRKAKLVD 321

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539332|ref|XP_002510731.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223551432|gb|EEF52918.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/316 (66%), Positives = 258/316 (81%), Gaps = 9/316 (2%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           VCVTGAGGF+ASW++KLLL++ Y V GT R+P +EKNA L++L++A+ENLKLFKA+LLDY
Sbjct: 9   VCVTGAGGFVASWLIKLLLAKGYIVRGTVRDPENEKNAHLWKLDRATENLKLFKAELLDY 68

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
           +++ SAI GC+GVFH+A P PS+      MEL+EPAVKGTLNV+KACLEA V R IVVSS
Sbjct: 69  NALYSAIEGCSGVFHVASPLPSSA-----MELIEPAVKGTLNVLKACLEANVNRTIVVSS 123

Query: 128 GVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTIC 187
           G AV +NP WPK Q+ DE+CWSDK++ +  +NWY LSKTEAE+ AL+F + + LDVV +C
Sbjct: 124 GAAVSMNPSWPKDQVKDESCWSDKQFQKKLDNWYGLSKTEAEAAALDFAETSALDVVRVC 183

Query: 188 PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGR 247
           P LVLGP+LQS  N+S+L LI+ LK G ES +N+L+ IVDVRDVAEALLLAYEK EAEGR
Sbjct: 184 PVLVLGPILQSTANSSTLFLIRQLKGGRESSDNRLQKIVDVRDVAEALLLAYEKPEAEGR 243

Query: 248 YICTAHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDEVMLTSEKLQKLGWSYRSLEE 303
           YIC AHMI A+DLVDKLKSLYP+Y YPK     F E  +E  ++SEKLQKLGWSYR LEE
Sbjct: 244 YICAAHMIMAKDLVDKLKSLYPDYKYPKRQAKLFVEGHEEPKMSSEKLQKLGWSYRPLEE 303

Query: 304 TLVDSVESYKKVGILN 319
           TL+DS+ESY+ VG+LN
Sbjct: 304 TLIDSIESYRAVGLLN 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357458847|ref|XP_003599704.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|357468097|ref|XP_003604333.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355488752|gb|AES69955.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355505388|gb|AES86530.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/313 (67%), Positives = 257/313 (82%)

Query: 6   ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
           ++VCVTGAGGF+ASW+VKLLLS+ YFVHGT REP   K   L +LEKASENL LFKAD+L
Sbjct: 11  KKVCVTGAGGFVASWLVKLLLSKGYFVHGTVREPGSPKYEHLLKLEKASENLTLFKADIL 70

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           DY+SV SAIVGC+ VFH+A P PST VPNP++E++EPAVKGT NV++ACL+A V+RV+ V
Sbjct: 71  DYESVYSAIVGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTANVLEACLKANVERVVFV 130

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVT 185
           SS  AV +NP  PK + +DE+CWSDK+YC+ T NWYC +KTEAE +AL F K+TGL+VVT
Sbjct: 131 SSVAAVAINPNLPKDKAIDESCWSDKDYCKNTKNWYCYAKTEAEEQALHFAKRTGLNVVT 190

Query: 186 ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE 245
           ICP LVLGP+LQS  N SSLVL+KLLKEG +S+ENKLR IVDVRDV  A+LLAYE  EA+
Sbjct: 191 ICPTLVLGPILQSTTNASSLVLVKLLKEGCDSVENKLRWIVDVRDVVNAILLAYENHEAD 250

Query: 246 GRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSLEETL 305
           GRYICT+H I  RDLV++LK +YPNY YP ++ E +D  ML+SEKLQ LGW  R LEETL
Sbjct: 251 GRYICTSHAIVTRDLVERLKGIYPNYKYPTNYIEMDDYKMLSSEKLQSLGWKLRPLEETL 310

Query: 306 VDSVESYKKVGIL 318
           +DSVESYK+ G+L
Sbjct: 311 IDSVESYKEAGLL 323

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823153|ref|XP_002879459.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297325298|gb|EFH55718.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/318 (66%), Positives = 263/318 (82%), Gaps = 1/318 (0%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
           + K +VCVTGAGGFL SWVV LLLSRDYFV      P +EK A L +LEKA + LKLFKA
Sbjct: 4   VHKGKVCVTGAGGFLGSWVVDLLLSRDYFVQRPCLSPDNEKYAHLKKLEKAGDKLKLFKA 63

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           DLLDY S++SAI GC+GVFH+ACP P  +VPNP++EL+ PAV GTLNV+KAC+EA VKRV
Sbjct: 64  DLLDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACVEANVKRV 123

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
           + VSS  A+ +NP W K Q++DETCWSD+EYC+ T NWYCL+KT AESEA EF K+ GLD
Sbjct: 124 VYVSSVAALFMNPVWSKNQVLDETCWSDQEYCKKTENWYCLAKTRAESEAFEFAKRAGLD 183

Query: 183 VVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK 241
           +V++CP+LVLGP+LQ   VN SSLVL+KLLKEG+ES +N+ R +VDVRDVA+ALLL YEK
Sbjct: 184 LVSVCPSLVLGPILQQHTVNASSLVLLKLLKEGFESRDNQERHLVDVRDVAQALLLVYEK 243

Query: 242 AEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSL 301
           AEAEGRYICTAH ++ + +V+KLKSLYP+YNYPK + E E+ V ++SEKLQKLGW+Y++L
Sbjct: 244 AEAEGRYICTAHTVKEQIVVEKLKSLYPHYNYPKRYIEAEERVKMSSEKLQKLGWTYKAL 303

Query: 302 EETLVDSVESYKKVGILN 319
           EETLVDSVESY+K  +++
Sbjct: 304 EETLVDSVESYRKAKLVD 321

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
TAIR|locus:2051008	321	CRL1 "CCR(Cinnamoyl coA:NADP o	0.993	0.987	0.625	1.1e-110
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.993	0.987	0.628	2.1e-109
TAIR|locus:2011741	325	AT1G76470 [Arabidopsis thalian	0.993	0.975	0.526	9.1e-84
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.990	0.975	0.431	5.4e-63
TAIR|locus:2025832	332	CCR2 "cinnamoyl coa reductase"	0.981	0.942	0.419	2.4e-60
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	0.956	0.886	0.427	6.4e-60
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.978	0.968	0.446	3.5e-59
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.971	0.950	0.434	4.5e-59
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.987	0.969	0.420	9.3e-59
TAIR|locus:2012265	322	AT1G09490 [Arabidopsis thalian	0.965	0.956	0.405	3.7e-55

TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
 Identities = 199/318 (62%), Positives = 249/318 (78%)

Query:     3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
             + K +VCVTGAGGFL SWVV LLLS+DYFVHGT R+P +EK A L +LEKA + LKLFKA
Sbjct:     4 VHKGKVCVTGAGGFLGSWVVDLLLSKDYFVHGTVRDPDNEKYAHLKKLEKAGDKLKLFKA 63

Query:    63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
             DLLDY S++SAI GC+GVFH+ACP P  +VPNP++EL+ PAV GTLNV+KAC+EA VKRV
Sbjct:    64 DLLDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEANVKRV 123

Query:   123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
             + VSS  A  +NP W K Q++DE CWSD+EYC+ T NWYCL+KT AESEA EF K+TGL 
Sbjct:   124 VYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTENWYCLAKTRAESEAFEFAKRTGLH 183

Query:   183 VVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXXXXX 241
             +V++CP LVLGP+LQ   VN SSLVL+KLLKEG+E+ +N+ R +VDVRDV          
Sbjct:   184 LVSVCPTLVLGPILQQNTVNASSLVLLKLLKEGFETRDNQERHLVDVRDVAQALLLVYEK 243

Query:   242 XXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSL 301
                 GRYICT+H ++   +V+KLKS YP+YNYPK + + ED V ++SEKLQKLGW+YR L
Sbjct:   244 AEAEGRYICTSHTVKEEIVVEKLKSFYPHYNYPKKYIDAEDRVKVSSEKLQKLGWTYRPL 303

Query:   302 EETLVDSVESYKKVGILN 319
             EETLVDSVESY+K  +++
Sbjct:   304 EETLVDSVESYRKAKLVD 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
 Identities = 200/318 (62%), Positives = 250/318 (78%)

Query:     3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
             ++K +VCVTGAGGFL SWVV  LLSRDYFVHGT R+P +EK A L +L+KA + LKLFKA
Sbjct:     4 VQKGKVCVTGAGGFLGSWVVNHLLSRDYFVHGTVRDPGNEKYAHLKKLDKAGDKLKLFKA 63

Query:    63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
             DLL+Y S++SAI GC+GVFH+ACP PS +VPNP+++L+ PAV GTLNV+KAC+EAKVKRV
Sbjct:    64 DLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEAKVKRV 123

Query:   123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
             + VSS  AV +NP W K Q++DET WSD++YC+ T NWY LSKT AESEA EF K+TGLD
Sbjct:   124 VYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAFEFAKRTGLD 183

Query:   183 VVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXXXXX 241
             +V++CP LVLGP+LQ   VN SSLVL+KLLKEGYES  N+ R +VDVRDV          
Sbjct:   184 LVSVCPTLVLGPVLQQHTVNASSLVLLKLLKEGYESRNNQERHLVDVRDVAQALLLVYEK 243

Query:   242 XXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYRSL 301
                 GRYIC  H +R +++ +KLKSLY NYNYPK + E + +V ++SEKLQKLGW+YR L
Sbjct:   244 AEAEGRYICIGHTVREQEVAEKLKSLYLNYNYPKRYIEADGKVKVSSEKLQKLGWTYRPL 303

Query:   302 EETLVDSVESYKKVGILN 319
             EETLVDSVESY+K  +++
Sbjct:   304 EETLVDSVESYRKAKLVD 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2011741 AT1G76470 [Arabidopsis thaliana (taxid:3702)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 170/323 (52%), Positives = 225/323 (69%)

Query:     1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
             MA+ K++VCVTGAGGF+ASW+VK LLSR Y VHGT R+P DEKN  L +L+ AS+NLKLF
Sbjct:     1 MAV-KQKVCVTGAGGFIASWLVKFLLSRGYTVHGTVRDPCDEKNDHLRKLDNASKNLKLF 59

Query:    61 KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
             KADL D + + SAI GC+GVFHIA P P   VP  + EL++PA+ GT NV++AC E KV+
Sbjct:    60 KADLFDDEGLFSAIDGCSGVFHIASPVPFEGVPLTEEELIKPALTGTKNVLEACTETKVQ 119

Query:   121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN-W--YCLSKTEAESEALEFGK 177
             +V+VVSS  AV  NP+WP+    DE CWSD +Y  +    W  Y L+KT  E EALE+ K
Sbjct:   120 KVVVVSSIAAVVYNPKWPQDVAKDEDCWSDTQYLHSLEGYWRYYYLAKTLTEREALEWSK 179

Query:   178 KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXX 237
             +   DVVT+CP++++GP LQS +N+SSL L+K +K G +SL +    +VDVRDV      
Sbjct:   180 RNFADVVTLCPSVIIGPRLQSTLNSSSLGLLKFIKGGIKSLLSDELYLVDVRDVADALLL 239

Query:   238 XXXXXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE-KEDEVM-LTSEKLQKLG 295
                     GRYIC +H +    L++KLK++YP  N+P+SFTE KE EV  L++EKL+ LG
Sbjct:   240 VYENREATGRYICNSHSLYTDSLMEKLKNMYPKRNFPESFTEVKEKEVRPLSAEKLKNLG 299

Query:   296 WSYRSLEETLVDSVESYKKVGIL 318
             W +R LEET+ DSV S++  G L
Sbjct:   300 WKFRPLEETIDDSVVSFEAAGDL 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 138/320 (43%), Positives = 189/320 (59%)

Query:     4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYE-LEKASENLKLFKA 62
             E+E VCVTGA G + SW+V  LL R Y VH T +   DEK  +  E LE A+  L LF+ 
Sbjct:     5 EREVVCVTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKHLEGLEGAATRLHLFEM 64

Query:    63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
             DLL YD+V +AI GC+GVFH+A P     V +PQ +LL+PAVKGT+NV+ A  EA VKRV
Sbjct:    65 DLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAKEASVKRV 124

Query:   123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
             +V SS  A+  +P WP  +I +E CW+ ++YCR    WY LSKT AE  A EF ++ GLD
Sbjct:   125 VVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKGLD 184

Query:   183 VVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXXXXXX 242
             VV + P  V+GP++   +N S  +L++LL+   E+ EN     V  +DV           
Sbjct:   185 VVVVNPGTVMGPVIPPSLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYEDP 244

Query:   243 XXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVML---TSEKLQKLGWSYR 299
                GR++C   +    D V K+  LYPNYN PK   E +  ++     S+KL  LG  + 
Sbjct:   245 YSKGRHLCVEAISHYGDFVAKVAELYPNYNVPKLPRETQPGLLRDKNASKKLIDLGLKFI 304

Query:   300 SLEETLVDSVESYKKVGILN 319
             S+EE + + VES K  G ++
Sbjct:   305 SMEEIIKEGVESLKSKGFIS 324

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 135/322 (41%), Positives = 188/322 (58%)

Query:     1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
             M ++ + VCVTGAGG++ASW+VKLLL R Y V GT R P+D KN  L EL+ A E L L 
Sbjct:     1 MLVDGKLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLH 60

Query:    61 KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
              ADLLDY+++ + I GC+GVFH A  +P T  P     +LEPAV G   V+ A  +AKVK
Sbjct:    61 SADLLDYEALCATIDGCDGVFHTA--SPMTDDPET---MLEPAVNGAKFVIDAAAKAKVK 115

Query:   121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
             RV+  SS  AV +NP      I+DE CWSD ++C+ T NWYC  K  AE  A E  K  G
Sbjct:   116 RVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKG 175

Query:   181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXXXX 240
             +D+V + P LVLGP LQS +N S + ++K L    ++  N  ++ VDVRDV         
Sbjct:   176 VDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYE 235

Query:   241 XXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYP-KSFTEKEDEVM---LTSEKLQKLGW 296
                  GRYI     +   ++V+ L   +P Y  P K   EK         T++K++ LG 
Sbjct:   236 APSASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGL 295

Query:   297 SYRSLEETLVDSVESYKKVGIL 318
              ++ ++++L +SV+S ++ G L
Sbjct:   296 EFKPIKQSLYESVKSLQEKGHL 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=NAS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0042754 "negative regulation of circadian rhythm" evidence=IMP

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 135/316 (42%), Positives = 187/316 (59%)

Query:     8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
             VCVTGAGG++ASW+VK+LL R Y V GT R P D KN  L ELE   E L L KADL DY
Sbjct:    13 VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query:    68 DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
             +++K+AI GC+GVFH A P       +P+ +++EPAV G   V+ A  EAKVKRV++ SS
Sbjct:    73 EALKAAIDGCDGVFHTASPVTD----DPE-QMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query:   128 GVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTIC 187
               AV ++P      ++DE+CWSD ++C+ T NWYC  K  AE  A E  K+ G+D+V + 
Sbjct:   128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query:   188 PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXXXXXXXXXGR 247
             P LVLGP LQ  +N S   ++K L    ++  N  +  VDVRDV              GR
Sbjct:   188 PVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGR 247

Query:   248 YICTAHMIRAR-DLVDKLKSLYPNYNYP-KSFTEKEDEVM---LTSEKLQKLGWSYRSLE 302
             Y+  A   R R ++V+ L  L+P Y  P K   EK         T++K++ LG  + S +
Sbjct:   248 YLL-AESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTK 306

Query:   303 ETLVDSVESYKKVGIL 318
             ++L D+V+S ++ G L
Sbjct:   307 QSLYDTVKSLQEKGHL 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 143/320 (44%), Positives = 188/320 (58%)

Query:     1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKL 59
             MA   + VCVTGA G++ASW+VKLLL R Y V  T R+PSDEK    L  L+ A E LKL
Sbjct:     1 MADGGKMVCVTGASGYVASWIVKLLLLRGYTVRATVRDPSDEKKTEHLLALDGAKEKLKL 60

Query:    60 FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AK 118
             FKADLL+  S + AI GC+ VFH A P  S TV +PQ+EL++PAVKGTLNV+K C + + 
Sbjct:    61 FKADLLEEGSFEQAIEGCDAVFHTASPV-SLTVTDPQIELIDPAVKGTLNVLKTCAKVSS 119

Query:   119 VKRVIVVSSGVAVGLN-PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK 177
             VKRVIV SS  AV    P      ++DE+C+SD  +C     WY LSKT AE EA  F K
Sbjct:   120 VKRVIVTSSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKLWYALSKTLAEDEAWRFAK 179

Query:   178 KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXX 237
             + GLD+V I P LVLGPLL+  +  S  V+++L+  G ++  NK   +VDVRDV      
Sbjct:   180 EKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELIT-GKDNFINKDFRLVDVRDVALAHIK 238

Query:   238 XXXXXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKED-EVM--LTSEKLQKL 294
                     GRYI    ++   D+   L+  +P+ N        E   V+  L  EK++ L
Sbjct:   239 AFETPSANGRYIIEGPVVTINDIEKILREFFPDLNLGNKGEASEIIPVIYKLCVEKVKSL 298

Query:   295 GWSYRSLEETLVDSVESYKK 314
             G  +   E TL D++ S K+
Sbjct:   299 GIEFTPTEATLRDTILSLKE 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 139/320 (43%), Positives = 191/320 (59%)

Query:     4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKLFKA 62
             E + VCVTGA G++ASW+VK LLSR Y V  + R+PSD K  + L  LE A E L LFKA
Sbjct:     6 EGKVVCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERLHLFKA 65

Query:    63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKR 121
             DLL+  S  SAI GC+GVFH A P       +PQ EL++PAVKGTLNV+ +C +A  VKR
Sbjct:    66 DLLEQGSFDSAIDGCHGVFHTASPF-FNDAKDPQAELIDPAVKGTLNVLNSCAKASSVKR 124

Query:   122 VIVVSSGVAVGLN--PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT 179
             V+V SS  AVG N  PR P   + DET +SD E C  +  WY LSKT AE  A +  K+ 
Sbjct:   125 VVVTSSMAAVGYNGKPRTPDVTV-DETWFSDPELCEASKMWYVLSKTLAEDAAWKLAKEK 183

Query:   180 GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXXX 239
             GLD+VTI P +V+GPLLQ  +NTS+  ++ L+  G ++  N     V+V+DV        
Sbjct:   184 GLDIVTINPAMVIGPLLQPTLNTSAAAILNLIN-GAKTFPNLSFGWVNVKDVANAHIQAF 242

Query:   240 XXXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV---MLTSEKLQKLGW 296
                   GRY     ++   ++V+ L+ LYPN   P+   ++   V    ++ +K + LG 
Sbjct:   243 EVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPERCVDENPYVPTYQVSKDKTRSLGI 302

Query:   297 SYRSLEETLVDSVESYKKVG 316
              Y  L+ ++ ++VES K+ G
Sbjct:   303 DYIPLKVSIKETVESLKEKG 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 137/326 (42%), Positives = 200/326 (61%)

Query:     1 MALEKER-VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLK 58
             M+ E+E+ VCVTGA G++ASW+VKLLL R Y V  + R+P+D  K   L  LE A E LK
Sbjct:     1 MSSEEEKTVCVTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEHLLALEGAEERLK 60

Query:    59 LFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-A 117
             LFKA+LL+  S  SAI GC GVFH A P     V +PQ ELL+PAVKGT+NV+ +CL+ +
Sbjct:    61 LFKANLLEEGSFDSAIDGCEGVFHTASPFYHD-VKDPQAELLDPAVKGTINVLSSCLKTS 119

Query:   118 KVKRVIVVSSGVAVGLN--PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEF 175
              VKRV++ SS  AV  N  PR P+  I+DET ++D +YCR +  WY LSKT AE+ A +F
Sbjct:   120 SVKRVVLTSSIAAVAFNGMPRTPE-TIVDETWFADPDYCRASKLWYVLSKTLAENAAWKF 178

Query:   176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXX 235
              K+  L +V+I P +V+GPLLQ  +NTS+  ++ L+K G ++  N     V+V+DV    
Sbjct:   179 AKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIK-GAQTFPNATFGWVNVKDVANAH 237

Query:   236 XXXXXXXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV---MLTSEKLQ 292
                       GRY     +    ++V+ L  LYP++  P+   +++  +    ++ EK +
Sbjct:   238 IQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEKCADEKIYIPTYKVSKEKAE 297

Query:   293 KLGWSYRSLEETLVDSVESYKKVGIL 318
              LG  +  LE ++ ++VES +  G +
Sbjct:   298 SLGVEFVPLEVSIKETVESLRDKGFI 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 129/318 (40%), Positives = 183/318 (57%)

Query:     8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKLFKADLLD 66
             VCVTGA G++ASW+VKLLL R Y V+ T R+P D+K    L  L+ A E LKLFKADLL+
Sbjct:     8 VCVTGASGYIASWIVKLLLLRGYTVNATVRDPKDKKKTEHLLALDGAKERLKLFKADLLE 67

Query:    67 YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AKVKRVIVV 125
               S   AI GC+ VFH A P    TV +PQ EL++PA+KGT+NV+  C + + VKRVI+ 
Sbjct:    68 ESSFDQAIDGCDAVFHTASPV-LFTVTDPQTELIDPALKGTINVLNTCKQVSSVKRVILT 126

Query:   126 SSGVAVGLNPRWPKG--QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
             SS  AV L+ + P G   ++DET +SD   CR T NWY LSK  AE+ A +F K  G+D+
Sbjct:   127 SSTAAV-LSRQPPIGPNDLVDETFFSDPSLCRETKNWYSLSKILAENAAWQFAKDNGIDM 185

Query:   184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXXXXXXX 243
             V + P  + GPLLQ  +N S  +++  +  G      +     DVRDV            
Sbjct:   186 VVLNPGFICGPLLQPTLNMSVELIVDFIN-GKNPFNKRYYRFSDVRDVALVHIKALETPS 244

Query:   244 XXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTS---EKLQKLGWSYRS 300
               GRYI     +   D++D L+ L+P+ +   +  E E   M+     EK++ LG  +  
Sbjct:   245 ANGRYIIDGPNMSVNDIIDILRKLFPDLSIADTNEESEMNEMICQVCVEKVKNLGVEFTP 304

Query:   301 LEETLVDSVESYKKVGIL 318
             ++ +L D++ S K+  +L
Sbjct:   305 MKSSLRDTIVSLKEKCLL 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UT59	YKJ7_SCHPO	1, ., 1, ., 1, ., -	0.3194	0.9059	0.8601	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.219	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_II2105 hypothetical protein (320 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	319
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-138
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	8e-95
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	2e-79
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	2e-74
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	6e-73
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	2e-68
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	8e-68
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	2e-66
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-64
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	1e-57
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	5e-47
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	3e-42
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-40
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	4e-36
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	6e-36
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	5e-20
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-18
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	5e-18
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	5e-18
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-17
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	3e-17
cd08946	200	cd08946, SDR_e, extended (e) SDRs	5e-17
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	4e-16
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	4e-16
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	9e-15
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-13
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	7e-12
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-11
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-11
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	4e-11
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	1e-10
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	4e-10
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	4e-10
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	6e-10
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	1e-09
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	1e-09
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	2e-09
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-09
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-09
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	1e-08
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	1e-08
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-08
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	8e-08
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-07
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-07
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	5e-07
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-06
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-06
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	4e-06
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	4e-06
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	5e-06
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	7e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	9e-06
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	1e-05
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-05
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-05
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	1e-05
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	2e-05
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	3e-05
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	9e-05
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	1e-04
pfam08659	181	pfam08659, KR, KR domain	1e-04
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	1e-04
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	2e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-04
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	3e-04
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	4e-04
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	5e-04
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	8e-04
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	0.001
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	0.001
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	0.001
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	0.001
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	0.002
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.002
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.002
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	0.004
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	0.004

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  393 bits (1013), Expect = e-138
 Identities = 150/294 (51%), Positives = 198/294 (67%), Gaps = 6/294 (2%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-KNARLYELEKASENLKLFKADLLD 66
           VCVTGA GF+ SW+VK LL R Y V  T R+P DE K A L ELE A E LKLFKADLLD
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVV 125
           Y S  +AI GC+GVFH+A P       +P+ E++EPAVKGTLNV++AC +AK VKRV+  
Sbjct: 61  YGSFDAAIDGCDGVFHVASP-VDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVT 185
           SS  AV  NP   +G+++DE+CWSD ++C+ T  WY LSKT AE  A EF ++ GLD+VT
Sbjct: 120 SSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDLVT 179

Query: 186 ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE 245
           + P+LV+GP LQ  +N+SS +++ LLK   E  +N    +V V DVA+A +L YEK  A 
Sbjct: 180 VNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILLYEKPSAS 239

Query: 246 GRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVM---LTSEKLQKLGW 296
           GRYIC++H++   +L   L   YP YN P  F + +  V    L+S+KL+ LG+
Sbjct: 240 GRYICSSHVVTRPELAALLAKKYPQYNIPTKFEDDQPGVARVKLSSKKLKDLGF 293

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  283 bits (726), Expect = 8e-95
 Identities = 141/319 (44%), Positives = 194/319 (60%), Gaps = 10/319 (3%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKLFKADLLD 66
           VCVTGA G++ASW+VKLLL R Y V  T R+P+D +K   L  L+ A E L LFKA+LL+
Sbjct: 7   VCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLE 66

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVV 125
             S  S + GC GVFH A P     V +PQ EL++PAVKGTLNV+++C +   VKRV+V 
Sbjct: 67  EGSFDSVVDGCEGVFHTASPF-YHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVT 125

Query: 126 SSGVAVGLN--PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
           SS  AV  N  P  P   ++DET +SD  +C  +  WY LSKT AE  A +F K+ G+D+
Sbjct: 126 SSMAAVAYNGKPLTP-DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDM 184

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE 243
           VTI P +V+GPLLQ  +NTS+  ++ L+  G ++  N     VDVRDVA A + A+E   
Sbjct: 185 VTINPAMVIGPLLQPTLNTSAEAILNLIN-GAQTFPNASYRWVDVRDVANAHIQAFEIPS 243

Query: 244 AEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV---MLTSEKLQKLGWSYRS 300
           A GRY     ++   ++V  L  LYP    P+   + +  V    ++ EK + LG  +  
Sbjct: 244 ASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEFIP 303

Query: 301 LEETLVDSVESYKKVGILN 319
           LE +L D+VES K+ G L+
Sbjct: 304 LEVSLKDTVESLKEKGFLS 322

Length = 322

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  245 bits (625), Expect = 2e-79
 Identities = 135/315 (42%), Positives = 191/315 (60%), Gaps = 9/315 (2%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           VCVTGAGG++ASW+VK+LL R Y V GT R P D KN  L ELE   E L L KADL DY
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
           +++K+AI GC+GVFH A P     V +   +++EPAV G   V+ A  EAKVKRV++ SS
Sbjct: 73  EALKAAIDGCDGVFHTASP-----VTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query: 128 GVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTIC 187
             AV ++P      ++DE+CWSD ++C+ T NWYC  K  AE  A E  K+ G+D+V + 
Sbjct: 128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 188 PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGR 247
           P LVLGP LQ  +N S   ++K L    ++  N  +  VDVRDVA A +L YE   A GR
Sbjct: 188 PVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGR 247

Query: 248 YICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKED----EVMLTSEKLQKLGWSYRSLEE 303
           Y+         ++V+ L  L+P Y  P    ++++        T++K++ LG  + S ++
Sbjct: 248 YLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQ 307

Query: 304 TLVDSVESYKKVGIL 318
           +L D+V+S ++ G L
Sbjct: 308 SLYDTVKSLQEKGHL 322

Length = 342

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  231 bits (589), Expect = 2e-74
 Identities = 135/317 (42%), Positives = 186/317 (58%), Gaps = 8/317 (2%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKLFKADLLD 66
           VCVTGA G++ASW+VKLLL R Y V  T R+ +D +K   L  L+ A E LKLFKADLL+
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE 67

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AKVKRVIVV 125
             S + AI GC+ VFH A P    TV +PQ EL++PA+KGT+NV+  C E   VKRVI+ 
Sbjct: 68  ESSFEQAIEGCDAVFHTASPV-FFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT 126

Query: 126 SSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVV 184
           SS  AV    P      ++DET +SD   CR T NWY LSK  AE+ A EF K  G+D+V
Sbjct: 127 SSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMV 186

Query: 185 TICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA 244
            + P  + GPLLQ  +N S  +++  +  G     N+    VDVRDVA A + A E   A
Sbjct: 187 VLNPGFICGPLLQPTLNFSVELIVDFIN-GKNLFNNRFYRFVDVRDVALAHIKALETPSA 245

Query: 245 EGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTS---EKLQKLGWSYRSL 301
            GRYI    ++   D++D L+ L+P+     +  E E   M+     EK++ LG  +  +
Sbjct: 246 NGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGVEFTPM 305

Query: 302 EETLVDSVESYKKVGIL 318
           + +L D++ S K+  +L
Sbjct: 306 KSSLRDTILSLKEKCLL 322

Length = 322

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  228 bits (583), Expect = 6e-73
 Identities = 120/329 (36%), Positives = 190/329 (57%), Gaps = 15/329 (4%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKL 59
           M  +KE VCVTGA GF+ SW+V  LL R Y V  T R+P++ +K   L +L  A+  L L
Sbjct: 1   MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK- 118
           +KADL    S   AI GC GVFH+A P    +  +P+ E+++P V G L+++KAC +AK 
Sbjct: 61  WKADLAVEGSFDDAIRGCTGVFHVATPMDFES-KDPENEVIKPTVNGMLSIMKACAKAKT 119

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT---TNNWYCLSKTEAESEALEF 175
           V+R++  SS   V +     +  + DE CWSD ++CR    T   Y +SKT AE  A ++
Sbjct: 120 VRRIVFTSSAGTVNVEEH--QKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKY 177

Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI--VDVRDVAE 233
             + GLD ++I P LV+GP + + +  S +  + L+  G E+  + ++    V + D+  
Sbjct: 178 AAENGLDFISIIPTLVVGPFISTSMPPSLITALSLIT-GNEAHYSIIKQGQFVHLDDLCN 236

Query: 234 ALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE---VMLTSEK 290
           A +  +E   AEGRYIC++H     DL   L+  YP YN P  F   +++   V  +S+K
Sbjct: 237 AHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKK 296

Query: 291 LQKLGWSYR-SLEETLVDSVESYKKVGIL 318
           L  LG++++ SLE+    ++E+ ++ G++
Sbjct: 297 LTDLGFTFKYSLEDMFDGAIETCREKGLI 325

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  215 bits (548), Expect = 2e-68
 Identities = 110/299 (36%), Positives = 155/299 (51%), Gaps = 16/299 (5%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKLFKADLLD 66
           V VTGA GF+AS VV+ LL R Y V  T R+PS  K    L +L+     L+L  ADL D
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 67  YDSVKSAIVGCNGVFHIACPAP-STTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIV 124
             S    I GC GVFH+A P   S+  PN   E+++PA+ GTLN +KA   AK VKR ++
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPN---EVIKPAIGGTLNALKAAAAAKSVKRFVL 117

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN--W-YCLSKTEAESEALEFGKKTGL 181
            SS  +V +     +G ++DE  W+ +E+        W Y  SKT AE  A +F  +  +
Sbjct: 118 TSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENNI 177

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI-----VDVRDVAEALL 236
           D++T+ P L +G +  S+   SS      L  G E +   L +I     V V D+  A +
Sbjct: 178 DLITVIPTLTIGTIFDSET-PSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHI 236

Query: 237 LAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFT-EKEDEVMLTSEKLQKL 294
              E   A GRYICTA       L+  L+  YP+Y +P  F  + +D    +S KL ++
Sbjct: 237 GCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTFPTDFPDQGQDLSKFSSAKLLEI 295

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  215 bits (548), Expect = 8e-68
 Identities = 126/332 (37%), Positives = 186/332 (56%), Gaps = 20/332 (6%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK-NARLYELEKASENLKLFKAD 63
           K+  CV G  GFLAS ++KLLL + Y V+ T R+P ++K  A L  L++  + LK+F AD
Sbjct: 9   KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGD-LKIFGAD 67

Query: 64  LLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRV 122
           L D +S ++ I GC+ VFH+A P    +  +P+ ++++PA++G  NV+KAC +AK VKRV
Sbjct: 68  LTDEESFEAPIAGCDLVFHVATPVNFAS-EDPENDMIKPAIQGVHNVLKACAKAKSVKRV 126

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN--NW-YCLSKTEAESEALEFGKKT 179
           I+ SS  AV +N     G +M+E  W+D E+  +     W Y  SKT AE  A +F ++ 
Sbjct: 127 ILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN 186

Query: 180 GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR---------MIVDVRD 230
            +D++T+ P L+ GP L S +  SSL L   L  G E L N L+          I  V D
Sbjct: 187 NIDLITVIPTLMAGPSLTSDI-PSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVED 245

Query: 231 VAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE--KEDEVMLTS 288
           V  A +   EK  A GRYIC A      +L   L   YP Y  P  F +   + +++++S
Sbjct: 246 VCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISS 305

Query: 289 EKLQKLGWSYR-SLEETLVDSVESYKKVGILN 319
           EKL   G+S+   +EE    +VE +K  G+L 
Sbjct: 306 EKLISEGFSFEYGIEEIYDQTVEYFKAKGLLK 337

Length = 338

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  211 bits (537), Expect = 2e-66
 Identities = 132/326 (40%), Positives = 182/326 (55%), Gaps = 17/326 (5%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNA-RLYELEKASENLKL 59
           MA   + VCVTGA G++ASW+VKLLL R Y ++ T R+P D K    L  L+ A E LKL
Sbjct: 1   MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AK 118
           FKADLLD  S + AI GC  VFH A P   T   +PQ+EL+ PAV GT+NV++ C + + 
Sbjct: 61  FKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSS 120

Query: 119 VKRVIVVSSGVAVGLNPRWPKG--QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFG 176
           VKRVI+ SS  AV L P    G   ++DET +++  +      WY LSKT AE  A  F 
Sbjct: 121 VKRVILTSSMAAV-LAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFA 179

Query: 177 KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALL 236
           K   +D++ + P LV GP+LQ  +N S  V+++L+K G           VDVRDVA A +
Sbjct: 180 KDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMK-GKNPFNTTHHRFVDVRDVALAHV 238

Query: 237 LAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTS-------E 289
            A E   A GRYI    ++  +D+ + L+  +P+          ED   L S       +
Sbjct: 239 KALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIAD---RNEDITELNSVTFNVCLD 295

Query: 290 KLQKLGWS-YRSLEETLVDSVESYKK 314
           K++ LG   +   E +L D+V S K+
Sbjct: 296 KVKSLGIIEFTPTETSLRDTVLSLKE 321

Length = 325

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  205 bits (524), Expect = 1e-64
 Identities = 102/300 (34%), Positives = 149/300 (49%), Gaps = 13/300 (4%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKLFKADLL 65
            V VTGA GF+AS +V+ LL   Y V GT R  S     + L +    ++ L+    D L
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 66  -DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVI 123
              ++   A+ G + V H+A P P T  P+ + ++++PAV+GTLNV++A   A  VKRV+
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTG-PDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVV 119

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW-YCLSKTEAESEALEFGK--KTG 180
           + SS  AVG       G++  E  W+D    ++     Y  SKT AE  A EF K  K  
Sbjct: 120 LTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKPK 179

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM--IVDVRDVAEALLLA 238
            +++TI P  VLGP L +    SS  LI  L +G             VDVRDVA+A + A
Sbjct: 180 FELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVADAHVRA 239

Query: 239 YEKAEAEG-RYICTAHMIRARDLVDKLKSLYPNYNYPK---SFTEKEDEVMLTSEKLQKL 294
            E  EA G R+I +A     +++ D L+  +P    P    +       V   + K ++L
Sbjct: 240 LESPEAAGQRFIVSAGPFSFQEIADLLREEFPQLTAPFPAPNPLMLSILVKFDNRKSEEL 299

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  189 bits (481), Expect = 1e-57
 Identities = 117/342 (34%), Positives = 179/342 (52%), Gaps = 32/342 (9%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
                CVTGA G++ SW+VKLLL R Y VH T R+P   K+  L    K  + L+LF+AD
Sbjct: 9   ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDP--AKSLHLLSKWKEGDRLRLFRAD 66

Query: 64  LLDYDSVKSAIVGCNGVFHIACP----APSTTVPNP---QMELLEPAVKGTLNVVKACLE 116
           L +  S   A+ GC+GVFH+A        S         Q ++++PA+KGTLNV+K+CL+
Sbjct: 67  LQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLK 126

Query: 117 AK-VKRVIVVSS---GVAVGLNPRWPKGQIMDETCWSDKEYCRTTN--NW-YCLSKTEAE 169
           +K VKRV+  SS     A   N RW    ++DETC +  ++   T    W Y LSK   E
Sbjct: 127 SKTVKRVVFTSSISTLTAKDSNGRWR--AVVDETCQTPIDHVWNTKASGWVYVLSKLLTE 184

Query: 170 SEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE-----SLENKLRM 224
             A ++ K+ G+D+V++    V GP L   V +S  VL+  +    +     S  N  RM
Sbjct: 185 EAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNS-RM 243

Query: 225 ----IVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEK 280
               +V + D+ +A +   E+ +AEGRYIC        +L++ L   YP  N      E+
Sbjct: 244 GSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEE 303

Query: 281 EDEVM---LTSEKLQKLGWSYR-SLEETLVDSVESYKKVGIL 318
           +   +   ++S+KL+ LG+ Y+  +EE +  +++     G L
Sbjct: 304 KRGSIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFL 345

Length = 353

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  160 bits (407), Expect = 5e-47
 Identities = 108/342 (31%), Positives = 154/342 (45%), Gaps = 65/342 (19%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           VTGA GFL S +V+ LL++ Y V    R  SD     L  L      +++ + DL D  S
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRSGSD--AVLLDGL-----PVEVVEGDLTDAAS 55

Query: 70  VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV 129
           + +A+ GC+ VFH+A    S    + + EL    V+GT NV+ A LEA V+RV+  SS  
Sbjct: 56  LAAAMKGCDRVFHLAA-FTSLWAKDRK-ELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA 113

Query: 130 AVGLNPRWPKGQIMDET-CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICP 188
           A+G  P       +DET  W++    R   N Y  SK  AE E LE   + GLDVV + P
Sbjct: 114 ALGGPP----DGRIDETTPWNE----RPFPNDYYRSKLLAELEVLEAAAE-GLDVVIVNP 164

Query: 189 NLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI-------VDVRDVAEALLLAYEK 241
           + V GP  +    TS+ + +       + L  KL          VDVRDVAE  + A EK
Sbjct: 165 SAVFGPGDEG--PTSTGLDV------LDYLNGKLPAYPPGGTSFVDVRDVAEGHIAAMEK 216

Query: 242 AEAEGRYICTAHMIRARDLVDKLKSLY---------PNY----------------NYPKS 276
                RYI     +  + L + L  +          P +                  P  
Sbjct: 217 GRRGERYILGGENLSFKQLFETLAEITGVKPPRRTIPPWLLKAVAALSELKARLTGKPPL 276

Query: 277 FTEKEDEVM-----LTSEKLQK-LGWSYRSLEETLVDSVESY 312
            T +   V+      +S+K ++ LG+S R LEE L D++   
Sbjct: 277 LTPRTARVLRRNYLYSSDKARRELGYSPRPLEEALRDTLAWL 318

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  147 bits (373), Expect = 3e-42
 Identities = 93/302 (30%), Positives = 146/302 (48%), Gaps = 25/302 (8%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHG-TAREPSDEKNARLYELEKASENLKLFKA 62
             + VCV  A G++  W+VK LLSR Y VH    +    E    +  L    E LK+F  
Sbjct: 5   SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDV 64

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKR 121
           D LDY S+  A+ GC+G+F    P       + +M  +E  V+   NV++AC +   +++
Sbjct: 65  DPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVE--VRAAHNVLEACAQTDTIEK 122

Query: 122 VIVVSSGVAVGLNPRWPKGQI-----MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFG 176
           V+  SS  AV     W    I     +DE  WSD+ +CR    W+ L+KT +E  A    
Sbjct: 123 VVFTSSLTAV----IWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALA 178

Query: 177 KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALL 236
              G+++V+I   L++GP L ++ N         LK   +  EN + + VDV  + +A +
Sbjct: 179 MDRGVNMVSINAGLLMGPSL-TQHN-------PYLKGAAQMYENGVLVTVDVNFLVDAHI 230

Query: 237 LAYEKAEAEGRYICTAHMI-RARDLVDKLKSLYPNYNYPKSFTEKEDEVM---LTSEKLQ 292
            A+E   + GRY+C  H++    D V   + L P    P  +  +  EV    + ++KL 
Sbjct: 231 RAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLN 290

Query: 293 KL 294
           KL
Sbjct: 291 KL 292

Length = 297

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  143 bits (362), Expect = 2e-40
 Identities = 86/325 (26%), Positives = 134/325 (41%), Gaps = 33/325 (10%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R+ VTG  GF+ S +V+ LL+  + V G  R                   ++    DL D
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTD 53

Query: 67  YDSVKSAIVGCN-GVFHIACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
            D V     G    V H+A  +       +   E L+  V GTLN+++A   A VKR + 
Sbjct: 54  RDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVF 113

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVV 184
            SS   V  +   P    +DE             N Y +SK  AE     + +  GL VV
Sbjct: 114 ASSVSVVYGD---PPPLPIDED-----LGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVV 165

Query: 185 TICPNLVLGPLLQSKVNTSSLV-LIKLLKEGYESLE-----NKLRMIVDVRDVAEALLLA 238
            + P  V GP  +  +++  +   I+ L +G   +      ++ R  V V DVA+ALLLA
Sbjct: 166 ILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA 225

Query: 239 YEKAEAEGRYICTAHM-IRARDLVDKLKSLYPN-------YNYPKSFTEKEDEVMLTSEK 290
            E  +     I +    I  R+L + +     +           +    +E +++  S+ 
Sbjct: 226 LENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKA 285

Query: 291 LQKLGWSYR-SLEETLVDSVESYKK 314
              LGW  + SLEE L D++E   K
Sbjct: 286 RAALGWEPKVSLEEGLADTLEWLLK 310

Length = 314

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  132 bits (335), Expect = 4e-36
 Identities = 90/280 (32%), Positives = 129/280 (46%), Gaps = 31/280 (11%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASEN------L 57
           E   VCVTG   FL   +V  LL   Y V        D++  +L E+E   E       +
Sbjct: 52  EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE--KLREMEMFGEMGRSNDGI 109

Query: 58  KLFKADLLDYDSVKSAIVGCNGVFHIAC---PAPSTTVPNPQMELLEPAVKGTLNVVKAC 114
               A+L + +S+  A  GC GVFH +    PA  +      M  LE   K + NV++AC
Sbjct: 110 WTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGY-TKSMAELE--AKASENVIEAC 166

Query: 115 LE-AKVKRVIVVSSGVAVGLNPRWPKG------QIMDETCWSDKEYCRTTNNWYCLSKTE 167
           +    V++ +  SS +A      W +        ++DE  WSD+ +CR    WY L K +
Sbjct: 167 VRTESVRKCVFTSSLLAC----VWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLK 222

Query: 168 AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD 227
           AE  A    +  GL + TICP LV GP    + +T++   I  LK   E L + L    D
Sbjct: 223 AEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTAT---IAYLKGAQEMLADGLLATAD 279

Query: 228 VRDVAEALLLAYEKAE---AEGRYICTAHMIRARDLVDKL 264
           V  +AEA +  YE      A GRYIC  H++   D  ++L
Sbjct: 280 VERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEEL 319

Length = 367

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  131 bits (332), Expect = 6e-36
 Identities = 102/343 (29%), Positives = 153/343 (44%), Gaps = 47/343 (13%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           +V VTGA GF+ S VV+LLL +   V    R  SD +N    ++E       + + DL D
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVE-------IVEGDLRD 54

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
             S++ A+ GC  +FH+A        P+P+ E+    V+GT N+++A LEA V+RV+  S
Sbjct: 55  PASLRKAVAGCRALFHVAADY-RLWAPDPE-EMYAANVEGTRNLLRAALEAGVERVVYTS 112

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S   +G+      G   DET  S  +        Y  SK  AE  ALE   + GL VV +
Sbjct: 113 SVATLGVR---GDGTPADETTPSSLD---DMIGHYKRSKFLAEQAALEMAAEKGLPVVIV 166

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
            P+  +GP       T  +++  L  +    ++  L  +V V DVAE  LLA E+     
Sbjct: 167 NPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLN-LVHVDDVAEGHLLALERGRIGE 225

Query: 247 RYICTAHMIRARDLVDKLKSLY----PNYNYPK--------------SFTEKEDEVMLTS 288
           RYI     +  + ++DKL  +     P    P+                T KE  V +  
Sbjct: 226 RYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDG 285

Query: 289 EKLQK-------------LGWSYRSLEETLVDSVESYKKVGIL 318
            ++ K             LG+  R   E L D+VE ++  G L
Sbjct: 286 VRMAKKKMFFSSAKAVRELGYRQRPAREALRDAVEWFRANGYL 328

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 88.0 bits (219), Expect = 5e-20
 Identities = 87/326 (26%), Positives = 129/326 (39%), Gaps = 42/326 (12%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV VTG  GF+ S +V+ LL R + V        +    +   L +   N+K  + D+ D
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVL----DNLSTGKKENLPEVKPNVKFIEGDIRD 56

Query: 67  YDSVKSAIVGCNGVFHIACPA---PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
            + V+ A  G + VFH A  A    S  + +P  +  E  V GTLN+++A  +A VKR +
Sbjct: 57  DELVEFAFEGVDYVFHQAAQASVPRS--IEDPIKDH-EVNVLGTLNLLEAARKAGVKRFV 113

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW--YCLSKTEAESEALEFGKKTGL 181
             SS    G  P  PK    DE            N    Y +SK   E     F +  GL
Sbjct: 114 YASSSSVYGDPPYLPK----DED--------HPPNPLSPYAVSKYAGELYCQVFARLYGL 161

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVL---IKLLKEGYESLE-----NKLRMIVDVRDVAE 233
             V++    V GP  Q      + V+   I+   +G E         + R    V DV E
Sbjct: 162 PTVSLRYFNVYGP-RQDPNGGYAAVIPIFIERALKG-EPPTIYGDGEQTRDFTYVEDVVE 219

Query: 234 ALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEK-----EDEVMLT 287
           A LLA         Y I T       +L + ++ +         +           +   
Sbjct: 220 ANLLAATAGAGGEVYNIGTGKRTSVNELAELIREIL-GKELEPVYAPPRPGDVRHSLADI 278

Query: 288 SEKLQKLGWSYR-SLEETLVDSVESY 312
           S+  + LGW  + S EE L  +VE +
Sbjct: 279 SKAKKLLGWEPKVSFEEGLRLTVEWF 304

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 81.9 bits (203), Expect = 3e-18
 Identities = 61/255 (23%), Positives = 95/255 (37%), Gaps = 39/255 (15%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
           + VTG  GF+ S +V+ LL   Y   V G  R                +  ++  + DL 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSE----------SLNTGRIRFHEGDLT 50

Query: 66  DYDSVKSAIVGC--NGVFHIACPA---PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
           D D+++  +     + V H+A  +    S   P    + +   V GTL +++A   A VK
Sbjct: 51  DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPA---DFIRANVLGTLRLLEAARRAGVK 107

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
           R +  SS    G          + E            +  Y  +K  AE     + +  G
Sbjct: 108 RFVFASSSEVYG----DVADPPITED-----TPLGPLSP-YAAAKLAAERLVEAYARAYG 157

Query: 181 LDVVT-ICPNLVLGPLLQSKVNTSSL-VLIKLLKEG-----YESLENKLRMIVDVRDVAE 233
           L  V     N+  GP       T  +  LI+ + EG           + R  + V DVA 
Sbjct: 158 LRAVILRLFNVY-GPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQR-RDFLYVDDVAR 215

Query: 234 ALLLAYEKAEAEGRY 248
           A+LLA E  +    Y
Sbjct: 216 AILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 82.7 bits (205), Expect = 5e-18
 Identities = 51/199 (25%), Positives = 71/199 (35%), Gaps = 42/199 (21%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
            V VTGA GF+ S + + LL   + V       S   N+         +       D+ D
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNS--FNSWGLLDNAVHDRFHFISGDVRD 58

Query: 67  YDSVKSAIVGCNGVFHIACP-APSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
              V+  +  C+ VFH+A   A   +   P    +E  V GTLNV++A      KRV+  
Sbjct: 59  ASEVEYLVKKCDVVFHLAALIAIPYSYTAPL-SYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 126 SS----GVA------------VGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAE 169
           S+    G A                PR P                      Y  SK  A+
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSP----------------------YSASKQGAD 155

Query: 170 SEALEFGKKTGLDVVTICP 188
             A  +G+  GL V  I P
Sbjct: 156 RLAYSYGRSFGLPVTIIRP 174

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 82.6 bits (205), Expect = 5e-18
 Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 25/270 (9%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R  +TG  G   S++ + LL + Y VHG  R  S     R+  L    + + L   DL D
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGDLTD 60

Query: 67  YDSVKSAI--VGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RV 122
             S++ AI  V  + ++H+A  +    +  +P+    E    GTLN+++A     +  R 
Sbjct: 61  SSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPE-YTAEVNAVGTLNLLEAIRILGLDARF 119

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
              SS    G     P      ET        R   + Y +SK  A+     + +  GL 
Sbjct: 120 YQASSSEEYGKVQELP----QSETT---PFRPR---SPYAVSKLYADWITRNYREAYGLF 169

Query: 183 VV-TICPNLVLGPL-----LQSKVNTSSLVLIKLLKEGYESLEN--KLRMIVDVRDVAEA 234
            V     N   GP      +  K+ T  +  IK   +    L N    R   D RD  EA
Sbjct: 170 AVNGRLFNHE-GPRRGETFVTRKI-TRQVARIKAGLQPVLKLGNLDAKRDWGDARDYVEA 227

Query: 235 LLLAYEKAEAEGRYICTAHMIRARDLVDKL 264
             L  ++ E +   I T      R+ V+  
Sbjct: 228 YWLLLQQGEPDDYVIATGETHSVREFVELA 257

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 80.5 bits (199), Expect = 2e-17
 Identities = 65/268 (24%), Positives = 105/268 (39%), Gaps = 47/268 (17%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           +V VTGA GF+   +V  LLSR   V             R  E  + S  L    A+L D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRI---------AVRNAENAEPSVVL----AELPD 47

Query: 67  YDSVKSAIVGCNGVFHIACPA--PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
            DS     +G + V H+A      +    +P  +  +   + T  + +A     VKR + 
Sbjct: 48  IDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVF 107

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT----NNWYCLSKTEAESEALEFGKKTG 180
           +SS V V                     +  T      + Y  SK EAE   LE G   G
Sbjct: 108 LSS-VKVNGEGT------------VGAPFDETDPPAPQDAYGRSKLEAERALLELGASDG 154

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL---RMIVDVRDVAEALLL 237
           ++VV + P +V GP    + N +   L++L+  G       +   R +V + ++ +A+ L
Sbjct: 155 MEVVILRPPMVYGP--GVRGNFAR--LMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYL 210

Query: 238 AYEKAEA--------EGRYICTAHMIRA 257
                +A        +G  + TA ++  
Sbjct: 211 CISLPKAANGTFLVSDGPPVSTAELVDE 238

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLD 66
           V VTGA GF+ S +V+ L+ + Y V       S      L        + +++   D+ D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRD 60

Query: 67  YDSVKSAIVGCNGVFH----IACP----APSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
            DSV+ A+ GC+ VFH    IA P    AP + V        +  V GTLNV++A  +  
Sbjct: 61  PDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYV--------DTNVTGTLNVLQAARDLG 112

Query: 119 VKRVIVVSS 127
           V++V+  S+
Sbjct: 113 VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 63/250 (25%), Positives = 86/250 (34%), Gaps = 65/250 (26%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           + VTG  GF+ S +V+ LL R + V                              D LD 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVI---------------------------DRLDV 33

Query: 68  DSVKSAIVGCNGVFHIAC-PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
                       V H+A       +  NP  E  E  V GTLN+++A  +A VKR +  S
Sbjct: 34  ------------VVHLAALVGVPASWDNPD-EDFETNVVGTLNLLEAARKAGVKRFVYAS 80

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S    G                 ++   R  +  Y +SK  AE     +G+  GL VV +
Sbjct: 81  SASVYGSPE---------GLPEEEETPPRPLSP-YGVSKLAAEHLLRSYGESYGLPVVIL 130

Query: 187 CPNLVLGP----LLQSKVNTSSLVLIKLLKEG-----YESLENKLRMIVDVRDVAEALLL 237
               V GP     L   VN      I+   EG     +       R  + V DV  A+L 
Sbjct: 131 RLANVYGPGQRPRLDGVVND----FIRRALEGKPLTVFGGGNQT-RDFIHVDDVVRAILH 185

Query: 238 AYEKAEAEGR 247
           A E     G 
Sbjct: 186 ALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 77.5 bits (191), Expect = 4e-16
 Identities = 64/240 (26%), Positives = 93/240 (38%), Gaps = 24/240 (10%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
            V VTG  GF    +VK LL R   +V      P  E  +          N++  K D+ 
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSA-----WQHPNIEFLKGDIT 55

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           D + V+ A+ G + VFH A   P      P+    E  V GT NV+ AC    V++ +  
Sbjct: 56  DRNDVEQALSGADCVFHTAAIVPLA---GPRDLYWEVNVGGTQNVLDACQRCGVQKFVYT 112

Query: 126 SSGVAVGLNPRWPKGQIM---DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
           SS   +        GQ +   DET      Y    ++ Y  +K  AE   LE   +  L 
Sbjct: 113 SSSSVIF------GGQNIHNGDET----LPYPPLDSDMYAETKAIAEIIVLEANGRDDLL 162

Query: 183 VVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK 241
              + P  + GP  Q  V          L+K  +    N +     V ++A A +LA   
Sbjct: 163 TCALRPAGIFGPGDQGLVPILFEWAEKGLVKFVFGRGNNLVDF-TYVHNLAHAHILAAAA 221

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 76.6 bits (189), Expect = 4e-16
 Identities = 56/195 (28%), Positives = 80/195 (41%), Gaps = 22/195 (11%)

Query: 10  VTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           VTG GGFL   +V+LLL       V       S E    L E     + +   + D+ D 
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPE----LLEDFSKLQVITYIEGDVTDK 57

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
             ++ A+ G + V H A              +++  VKGT NV+ AC++A V+ ++  SS
Sbjct: 58  QDLRRALQGSDVVIHTAAIIDVFGKAYRD-TIMKVNVKGTQNVLDACVKAGVRVLVYTSS 116

Query: 128 GVAVGLNPRWPKGQIM---DETCWSDKEYCRTTNNWYCLSKTEAESEALE---FGKKTGL 181
              VG N     GQ +   DET      Y  T  + Y  SK  AE   L+      K G 
Sbjct: 117 MEVVGPNSY---GQPIVNGDET----TPYESTHQDPYPESKALAEKLVLKANGSTLKNGG 169

Query: 182 DVVTIC--PNLVLGP 194
            + T    P  + G 
Sbjct: 170 RLYTCALRPAGIFGE 184

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 73.7 bits (181), Expect = 9e-15
 Identities = 68/241 (28%), Positives = 94/241 (39%), Gaps = 20/241 (8%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASEN---LKLFKADLLD 66
           VTG GGFL   +++LLL R   +    R         L E  + S+    +   + D+ D
Sbjct: 4   VTGGGGFLGQHIIRLLLERKEEL-KEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
              +  A  G + V H A        PN + EL E  V GT  V++AC++  VKR++  S
Sbjct: 63  LSFLFRACQGVSVVIHTAAIVDVFGPPNYE-ELEEVNVNGTQAVLEACVQNNVKRLVYTS 121

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDV 183
           S    G N +        E    D  Y  T+   Y  SK  AE+  L       K G  +
Sbjct: 122 SIEVAGPNFKGRPIFNGVE----DTPYEDTSTPPYASSKLLAENIVLNANGAPLKQGGYL 177

Query: 184 VTIC--PNLVLG---PLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLA 238
           VT    P  + G     L    +        L      S  N L   V V +VA A +LA
Sbjct: 178 VTCALRPMYIYGEGSHFLTEIFDFLLTNNGWLFPRIKGSGVNPL---VYVGNVAWAHILA 234

Query: 239 Y 239
            
Sbjct: 235 A 235

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 53/227 (23%), Positives = 80/227 (35%), Gaps = 52/227 (22%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           V GA G     +VK LL+R + V   +R PS             +  +   + DL D   
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----------PAPGVTPVQKDLFDLAD 52

Query: 70  VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV 129
           +  A+ G + V   A  A                  G  +++ A   A V+R++VVS+  
Sbjct: 53  LAEALAGVDAVV-DAFGAR------------PDDSDGVKHLLDAAARAGVRRIVVVSAAG 99

Query: 130 AVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPN 189
                P   +             Y R        +K  AE E L     +GLD   + P 
Sbjct: 100 LYRDEPGTFRLDDAPLF----PPYAR--------AKAAAE-ELLR---ASGLDWTIVRP- 142

Query: 190 LVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALL 236
              G L   +  T      ++  EG  + E+     +   DVA ALL
Sbjct: 143 ---GALFDEEGET-----YEIGTEGDPAGESS----ISRADVAAALL 177

Length = 182

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 63.0 bits (154), Expect = 7e-12
 Identities = 59/243 (24%), Positives = 92/243 (37%), Gaps = 50/243 (20%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           +V V GA G +   VV+ LL R Y V    R+PS  +       +  +   ++   DL D
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAE-------KLEAAGAEVVVGDLTD 53

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAV--KGTLNVVKACLEAKVKRVIV 124
            +S+ +A+ G + V        S      +      AV   G +N++ A  +A VKR ++
Sbjct: 54  AESLAAALEGIDAVI-------SAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVL 106

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVV 184
           VSS +     P  P   +                  Y  +K +AE    ++ + +GLD  
Sbjct: 107 VSS-IGAD-KPSHPLEALGP----------------YLDAKRKAE----DYLRASGLDYT 144

Query: 185 TICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA 244
            + P    G L      T  +VL                 I    DVAE L  A +   A
Sbjct: 145 IVRP----GGLTDDPAGTGRVVLGG-------DGTRLDGPI-SRADVAEVLAEALDTPAA 192

Query: 245 EGR 247
            G+
Sbjct: 193 IGK 195

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 61/288 (21%), Positives = 103/288 (35%), Gaps = 43/288 (14%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAR-EPSDEKNARLYELEKASENLKLFKADL---- 64
           VTG  GFL   +VK LL   + V    R E   E + R+ E    ++ +++ + DL    
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62

Query: 65  --LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPA---VKGTLNVVKACLEAKV 119
             L   + +      + V H A         + Q    +     + GT +V++      +
Sbjct: 63  LGLSAAASRELAGKVDHVIHCA------ASYDFQAPNEDAWRTNIDGTEHVLELAARLDI 116

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT 179
           +R   VS+    G                ++    +   N Y  SK EAE        + 
Sbjct: 117 QRFHYVSTAYVAGNRE--------GNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQ- 167

Query: 180 GLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYESLENKLRM---------IVDVR 229
            + +    P++V+G    SK      +  +  L      L   L M         +V V 
Sbjct: 168 -IPLTVYRPSIVVGD---SKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVD 223

Query: 230 DVAEALLLAYEKAEAEGR-YICTA-HMIRARDLVD--KLKSLYPNYNY 273
            VA+A++   +K EA G+ +  T       R++ D  K   L P    
Sbjct: 224 YVADAIVYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLV 271

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 27/179 (15%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           + GA G   S +V+  L+R + V    R+P+        +L    E LK+ + D+LD + 
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVRDPA--------KLPAEHEKLKVVQGDVLDLED 55

Query: 70  VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV 129
           VK A+ G + V  I+              L     +GT N+V A   A VKR+IVV    
Sbjct: 56  VKEALEGQDAV--ISALGTRN--DLSPTTLH---SEGTRNIVSAMKAAGVKRLIVVGGA- 107

Query: 130 AVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICP 188
             G     PK  ++ +T        R           E  +  L+  +++GLD   + P
Sbjct: 108 --GSLDDRPKVTLVLDTLLFPPALRRV---------AEDHARMLKVLRESGLDWTAVRP 155

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 62.1 bits (152), Expect = 4e-11
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 30/144 (20%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTARE----PSDEKNARLYELEK------ASENL 57
           V VTG GG + S + + +L  +       ++      DE    LYE+ +          L
Sbjct: 1   VLVTGGGGSIGSELCRQILKFN------PKKIILFSRDEFK--LYEIRQELRQEYNDPKL 52

Query: 58  KLFKADLLDYDSVKSAI--VGCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVV 111
           + F  D+ D + ++ A+   G + VFH A       VP    NP ME ++  V GT NV 
Sbjct: 53  RFFIGDVRDRERLERAMEQHGVDTVFHAAA---LKHVPLVEYNP-MEAIKTNVLGTENVA 108

Query: 112 KACLEAKVKRVIVVSSGVAVGLNP 135
           +A +E  V++ +++S+  AV  NP
Sbjct: 109 EAAIENGVEKFVLISTDKAV--NP 130

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 66/256 (25%), Positives = 102/256 (39%), Gaps = 44/256 (17%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           +V VTGA GF+ S VV+ L++  + V G AR  SD   A+L      +   ++ + DL D
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLAR--SDAGAAKL-----EAAGAQVHRGDLED 54

Query: 67  YDSVKSAIVGCNGVFHIA------CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
            D ++ A    + V H+A        A +  V    +E L  A++GT             
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGT------------G 102

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
           + ++ +SG+ +        GQ  DE    +      T       +  +E+ ALE  ++  
Sbjct: 103 KPLIYTSGIWLLGPTG---GQEEDE----EAPDDPPTPAA----RAVSEAAALELAERGV 151

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL---ENKLRM-IVDVRDVAEALL 236
              V   P +V G      V      LI + +E   S    + K R   V   D A    
Sbjct: 152 RASVVRLPPVVHGRGDHGFVPM----LIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYR 207

Query: 237 LAYEKAEAEGRYICTA 252
           LA EK +A   Y   A
Sbjct: 208 LALEKGKAGSVYHAVA 223

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 57/245 (23%), Positives = 86/245 (35%), Gaps = 39/245 (15%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGT---AREPSDEKNARLYELEKASENLKLFKADL 64
           + VTGA G L   + + L +    V G     R        ++  +          + D+
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPR-VIGVDGLDRRRPPGSPPKVEYV----------RLDI 49

Query: 65  LDYDSVK-SAIVGCNGVFHIACPAPSTTVPNPQ---MELLEPAVKGTLNVVKACLEAKVK 120
            D  +         + V H+A       + +P     E     V GT NV+ AC  A V 
Sbjct: 50  RDPAAADVFREREADAVVHLA------FILDPPRDGAERHRINVDGTQNVLDACAAAGVP 103

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETC--WSDKEYCRTTNNWYCLSKTEAESEALEFGKK 178
           RV+V SS    G +P  P     D       +  Y R         K E E    EF ++
Sbjct: 104 RVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSR--------DKAEVEQLLAEFRRR 155

Query: 179 -TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLL 237
              L+V  + P  +LGP  ++            +  G++     L       DVA AL+L
Sbjct: 156 HPELNVTVLRPATILGPGTRNTTRDFLSPRRLPVPGGFDPPFQFLHE----DDVARALVL 211

Query: 238 AYEKA 242
           A    
Sbjct: 212 AVRAG 216

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 15/115 (13%)

Query: 10  VTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD 68
           V GA G     VV+ LL    F V    R+PS      L     A+  +++ + DL D +
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKAL-----AAPGVEVVQGDLDDPE 57

Query: 69  SVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
           S+++A+ G  GVF          V +      E  +    NVV A   A V+  +
Sbjct: 58  SLEAALKGVYGVFL---------VTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFV 103

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 57.0 bits (138), Expect = 6e-10
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 13/125 (10%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           + + GA GF+   + + LL + + V    R        RL + ++  E + + + DL D 
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTK-----RLSKEDQ--EPVAVVEGDLRDL 53

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
           DS+  A+ G + V H+A     T             V+GT NV++A  EA VK  I +SS
Sbjct: 54  DSLSDAVQGVDVVIHLAGAPRDTRDFCEVD------VEGTRNVLEAAKEAGVKHFIFISS 107

Query: 128 GVAVG 132
             A G
Sbjct: 108 LGAYG 112

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 64/252 (25%), Positives = 94/252 (37%), Gaps = 47/252 (18%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
              V G  GFL   +V+ LL R    VH     P+ E          +S  ++    DL 
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFEL------DPSSSGRVQFHTGDLT 54

Query: 66  DYDSVKSAIV--GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
           D   ++ A    G N VFH A P   +   N  +   +  V+GT NV++AC +  VK+++
Sbjct: 55  DPQDLEKAFNEKGPNVVFHTASPDHGS---NDDL-YYKVNVQGTRNVIEACRKCGVKKLV 110

Query: 124 VVSS-GVAVGLNP------RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEF- 175
             SS  V              P              Y     + Y  +K  AE   L+  
Sbjct: 111 YTSSASVVFNGQDIINGDESLP--------------YPDKHQDAYNETKALAEKLVLKAN 156

Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLV--LIKLLKEGYESLE----NKLRMIVDVR 229
             ++GL    + P  + GP          LV  L+K  K G    +    N L     V 
Sbjct: 157 DPESGLLTCALRPAGIFGP------GDRQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVE 210

Query: 230 DVAEALLLAYEK 241
           +VA A +LA + 
Sbjct: 211 NVAHAHILAADA 222

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 7/125 (5%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV VTG  GF  SW+   L      V G + +P    N  L+EL      +   + D+ D
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPN--LFELANLDNKISSTRGDIRD 63

Query: 67  YDSVKSAIVGCNG--VFHIAC-PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRV 122
            ++++ AI       VFH+A  P    +  +P +E  E  V GT+N+++A  E   VK V
Sbjct: 64  LNALREAIREYEPEIVFHLAAQPLVRLSYKDP-VETFETNVMGTVNLLEAIRETGSVKAV 122

Query: 123 IVVSS 127
           + V+S
Sbjct: 123 VNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 67/265 (25%), Positives = 105/265 (39%), Gaps = 41/265 (15%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
            V V GA GF+  +VV  L  R   V    R    E  AR   +      +   + DL D
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYR---CEAYARRLLVMGDLGQVLFVEFDLRD 58

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
            +S++ A+ G + V  I          N   E +   V+G   + KA  EA V+R+I +S
Sbjct: 59  DESIRKALEGSDVV--INLVGRLYETKNFSFEDVH--VEGPERLAKAAKEAGVERLIHIS 114

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
              A+G +              S  +Y R        SK E E EA+   ++   +   +
Sbjct: 115 ---ALGADAN------------SPSKYLR--------SKAEGE-EAV---REAFPEATIV 147

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLK--EGYESLENKLRMIVDVRDVAEALLLAYEKAEA 244
            P++V G   + +       L+  L         + K    V V DVAEA+  A +  E 
Sbjct: 148 RPSVVFGR--EDRFLNRFAKLLAFLPFPPLIGGGQTK-FQPVYVGDVAEAIARALKDPET 204

Query: 245 EGR--YICTAHMIRARDLVDKLKSL 267
           EG+   +    +    +LV+ L+ L
Sbjct: 205 EGKTYELVGPKVYTLAELVELLRRL 229

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 76/319 (23%), Positives = 128/319 (40%), Gaps = 46/319 (14%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV + G  GF+ S +V  LL     V    R          YEL      +   K D  +
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIP------PYELPLGG--VDYIKGDYEN 52

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVP-----NPQMELLEPAVKGTLNVVKACLEAKVKR 121
              ++SA+VG + V H+A     TT P     NP +++    V  T+ +++AC  A + +
Sbjct: 53  RADLESALVGIDTVIHLAS----TTNPATSNKNPILDIQT-NVAPTVQLLEACAAAGIGK 107

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGL 181
           +I  SSG  V      P+   + E+  +         + Y +SK   E     +    GL
Sbjct: 108 IIFASSGGTVYGV---PEQLPISESDPTLP------ISSYGISKLAIEKYLRLYQYLYGL 158

Query: 182 DVVTICPNLVLGPL--LQSKVNTSSLVLIKLLKEGYESLE--NKLRMIVD---VRDVAEA 234
           D   +  +   GP      K     + L K+L+   E +E       I D   + D+ EA
Sbjct: 159 DYTVLRISNPYGPGQRPDGKQGVIPIALNKILRG--EPIEIWGDGESIRDYIYIDDLVEA 216

Query: 235 LLLAYEKAEAEGRY-ICTAHMIRARDLVDKL-----KSLYPNYNYPKSFTEKEDEVMLTS 288
           L+        E  + I +       +L+ ++     +S+   Y   +  T    +++L  
Sbjct: 217 LMALLRSKGLEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPAR--TTDVPKIVLDI 274

Query: 289 EKL-QKLGWSYR-SLEETL 305
            +   +LGWS + SLE+ L
Sbjct: 275 SRARAELGWSPKISLEDGL 293

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 51/261 (19%), Positives = 88/261 (33%), Gaps = 54/261 (20%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
             VTGA   +   + + L      V    R  ++E  A L  +E    N    +AD+ D 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADR--NEEALAELAAIEALGGNAVAVQADVSDE 58

Query: 68  DSVKSAI-------VGCNGVFHIACPAPSTTVPNPQME----LLEPAVKGTLNVVKACLE 116
           + V++ +          + + + A  A    +     E    +L+  + G   + +A L 
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 117 AKVK----RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK----TEA 168
              K    R++ +SS   +   P                         Y  SK       
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQA---------------------AYAASKAALEGLT 157

Query: 169 ESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV 228
            S ALE     G+ V  + P LV  P+L         +  +  ++   +     R+    
Sbjct: 158 RSLALELA-PYGIRVNAVAPGLVDTPMLAK-------LGPEEAEKELAAAIPLGRLG-TP 208

Query: 229 RDVAEALLLAYEKAEAEGRYI 249
            +VAEA++     A  E  YI
Sbjct: 209 EEVAEAVVFL---ASDEASYI 226

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 33/171 (19%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEK------ASENLKL 59
            + VTG  G + S +V+ +L      +    R   DE    L+EL +        + L+ 
Sbjct: 4   TILVTGGAGSIGSELVRQILKFGPKKLIVFDR---DENK--LHELVRELRSRFPHDKLRF 58

Query: 60  FKADLLDYDSVKSAIV--GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKA 113
              D+ D + ++ A    G + VFH A       VP    NP  E ++  V GT NV+ A
Sbjct: 59  IIGDVRDKERLRRAFKERGPDIVFHAAA---LKHVPSMEDNP-EEAIKTNVLGTKNVIDA 114

Query: 114 CLEAKVKRVIVVSSGVAV------GLNPRWPKGQIMDETCWSDKEYCRTTN 158
            +E  V++ + +S+  AV      G   R     + ++   +  EY  +T 
Sbjct: 115 AIENGVEKFVCISTDKAVNPVNVMGATKR-----VAEKLLLAKNEYSSSTK 160

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 63/260 (24%), Positives = 94/260 (36%), Gaps = 28/260 (10%)

Query: 7   RVCVTGAGGFLASWVV-KLLLSRDYFVHGTAREPSDE-------KNARLYEL--EKASEN 56
            V +TGA GFL ++++ +LL   D  V    R  SDE       K   LY    E +++ 
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 57  LKLFKADL----LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVK 112
           +++   DL    L         +    V  I   A       P  EL    V GT  V++
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQELA-ENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLR 120

Query: 113 ACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC-RTTNNWYCLSKTEAESE 171
                K K +  VSS ++VG    +     +D    S      +     Y  SK  AE  
Sbjct: 121 LAATGKPKPLHYVSS-ISVG-ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKL 178

Query: 172 ALEFGKKTGLDVVTICPNLVLGPLLQSKVNTS------SLVLIKLLKEGYESLENKLRMI 225
             E G + GL V    P  + G      +NT        L L++L        E     +
Sbjct: 179 VREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGI--APDSEY-SLDM 234

Query: 226 VDVRDVAEALLLAYEKAEAE 245
           + V  VA A++    +    
Sbjct: 235 LPVDHVARAVVAPSVQVAEA 254

Length = 382

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 36/152 (23%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS-------DEKNARLYELEKA-- 53
           L  + V VTG GG + S + + +L  +         P        DE    LY ++    
Sbjct: 248 LTGKTVLVTGGGGSIGSELCRQILKFN---------PKEIILFSRDEYK--LYLIDMELR 296

Query: 54  ----SENLKLFKADLLDYDSVKSAIVG--CNGVFHIACPAPSTTVP----NPQMELLEPA 103
                  L+ +  D+ D D V+ A+ G   + VFH A       VP    NP  E ++  
Sbjct: 297 EKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAA---LKHVPLVEYNP-EEAIKTN 352

Query: 104 VKGTLNVVKACLEAKVKRVIVVSSGVAVGLNP 135
           V GT NV +A ++  VK+ +++S+  AV  NP
Sbjct: 353 VLGTENVAEAAIKNGVKKFVLISTDKAV--NP 382

Length = 588

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 9/129 (6%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R+ VTG  GF+ S +V  LL     V     +          E E  ++  +  K DLLD
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEV--VVVDNLSSGRRENIEPEFENKAFRFVKRDLLD 58

Query: 67  YDSVKSAIVGCNGVFHIACPAP---STTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
               K A    + VFH+A         T P+     LE  V  T NV++A     VKR++
Sbjct: 59  TA-DKVAKKDGDTVFHLAANPDVRLGATDPD---IDLEENVLATYNVLEAMRANGVKRIV 114

Query: 124 VVSSGVAVG 132
             SS    G
Sbjct: 115 FASSSTVYG 123

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 21/141 (14%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           +TG    +   +   L ++ Y V  TAR P   ++      E  ++NL++ + D+ D +S
Sbjct: 5   ITGCSSGIGLALALALAAQGYRVIATARNPDKLESLG----ELLNDNLEVLELDVTDEES 60

Query: 70  VKSAIVGCNGVFH----------IACPAPSTTVPNPQM-ELLEPAVKGTLNVVKACL--- 115
           +K+A+      F                P       ++ EL E  V G L V +A L   
Sbjct: 61  IKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLM 120

Query: 116 -EAKVKRVIVVSSGVAVGLNP 135
            +    R++ VSS    GL P
Sbjct: 121 RKQGSGRIVNVSS--VAGLVP 139

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 19/121 (15%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           VTGA G L + VV+LLL++   V    R P   K         A++ +++ + D  D ++
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKAK-------AFAADGVEVRQGDYDDPET 55

Query: 70  VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV 129
           ++ A  G + +  I            Q +          N + A  +A VK ++ +S+  
Sbjct: 56  LERAFEGVDRLLLI--SPSDLEDRIQQHK----------NFIDAAKQAGVKHIVYLSASG 103

Query: 130 A 130
           A
Sbjct: 104 A 104

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAR-----EPSDEKNARLYELEKASENLKLFK 61
           ++ VTGA GF+   V K LL R   V G        +    K ARL  L K S   K  K
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVR-LKEARLELLGK-SGGFKFVK 59

Query: 62  ADLLDYDSVKS--AIVGCNGVFHIACPAP-STTVPNPQMELLEPAVKGTLNVVKACLEAK 118
            DL D ++++        + V H+A  A    ++ NP    ++  + G LN+++ C    
Sbjct: 60  GDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHA-YVDSNIVGFLNLLELCRHFG 118

Query: 119 VKRVIVVSSGVAVGLNPRWP 138
           VK ++  SS    GLN + P
Sbjct: 119 VKHLVYASSSSVYGLNTKMP 138

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 54/280 (19%), Positives = 89/280 (31%), Gaps = 57/280 (20%)

Query: 1   MALEKERVCVTGAG-GF-LASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLK 58
           M L  +   VTGA  G   A  + + L      V   AR   +E    L    K +   +
Sbjct: 1   MDLSGKVALVTGASSGIGRA--IARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGR 58

Query: 59  --LFKADLLD-YDSVKSAI-------------VGCNGVFHIACPAPSTTVPNPQMELLEP 102
                AD+ D  +SV++ +             V   G+     P    T  +    +++ 
Sbjct: 59  AAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWD-RVIDV 117

Query: 103 AVKGTLNVVKACLEAKVKRVIVV-SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY 161
            + G   + +A L    K+ IV  SS   +G  P                         Y
Sbjct: 118 NLLGAFLLTRAALPLMKKQRIVNISSVAGLGGPPGQA---------------------AY 156

Query: 162 CLSKTE----AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES 217
             SK       ++ ALE   + G+ V  + P  +  P+  +  +     L +L       
Sbjct: 157 AASKAALIGLTKALALELAPR-GIRVNAVAPGYIDTPMTAALESAELEALKRLAA----- 210

Query: 218 LENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRA 257
               L  +    +VA A+        A   YI T   +  
Sbjct: 211 -RIPLGRLGTPEEVAAAVAFLASDEAA--SYI-TGQTLPV 246

Length = 251

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 28/137 (20%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLK-----LFKA 62
           + V GA G+    VV+  L   + V    R+P            + +++LK     L + 
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPK----------SELAKSLKAAGVELVEG 50

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           DL D++S+  A+ G + VF       S T      E+ +        +  A  EA VK  
Sbjct: 51  DLDDHESLVEALKGVDVVF-------SVTGFWLSKEIED-----GKKLADAAKEAGVKHF 98

Query: 123 IVVSSGVAVGL-NPRWP 138
           I    G  V   N   P
Sbjct: 99  IPSEFGNDVDRSNGVEP 115

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 47.5 bits (114), Expect = 4e-06
 Identities = 76/362 (20%), Positives = 118/362 (32%), Gaps = 105/362 (29%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-------ARLYELE--KASENL 57
           ++ VTG  GF+ S  V+ LL++               N         L  LE   +S   
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKII--------NLDKLTYAGNLENLEDVSSSPRY 53

Query: 58  KLFKADLLDYDSVKSAI--VGCNGVFHIA----------CPAPSTTVPNPQMELLEPAVK 105
           +  K D+ D + V         + V H A           P P     N         V 
Sbjct: 54  RFVKGDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRT-N---------VL 103

Query: 106 GTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDE---TCWSDKEYCRTT----N 158
           GT  +++A  +  VKR + +S+                DE       D E+  T+     
Sbjct: 104 GTYTLLEAARKYGVKRFVHIST----------------DEVYGDLLDDGEFTETSPLAPT 147

Query: 159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPL-----LQSKVNTSSLVLIKLLKE 213
           + Y  SK  A+     + +  GL VV    +   GP      L           I    +
Sbjct: 148 SPYSASKAAADLLVRAYHRTYGLPVVITRCSNNYGPYQFPEKLIPLF-------ILNALD 200

Query: 214 G-----YESLENKLRMIVDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSL 267
           G     Y    N  R  + V D A A+ L  EK      Y I   + +   +LV  +   
Sbjct: 201 GKPLPIYGDGLNV-RDWLYVEDHARAIELVLEKGRVGEIYNIGGGNELTNLELVKLIL-- 257

Query: 268 YPNYNYPKSFTEKEDEVM-------------LTSEKLQK-LGWSYR-SLEETLVDSVESY 312
                  +   + E  +              + S K+++ LGW  + S EE L  +V  Y
Sbjct: 258 -------ELLGKDESLITYVKDRPGHDRRYAIDSSKIRRELGWRPKVSFEEGLRKTVRWY 310

Query: 313 KK 314
            +
Sbjct: 311 LE 312

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 18/196 (9%)

Query: 6   ERVCVTGAGGFLASWVVKLLLSRDYFVHG--TAREPSDEKNARLYELEKASENLKLFKAD 63
            RV +TG  GF+ S + +  L + + V G           N    +  +    ++    D
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 64  LLDYDSVKSAIVGCNGVFHIAC-PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           + + + ++      + + H A  P+ +T+  +P++   E    GTLNV++A  +      
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRL-DFETNALGTLNVLEAARQHAPNAP 119

Query: 123 IVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNW------------YCLSKTEAE 169
            + +S   V G  P +   + + ET +       +                Y  SK  A+
Sbjct: 120 FIFTSTNKVYGDLPNYLPLEEL-ETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178

Query: 170 SEALEFGKKTGLDVVT 185
               E+G+  GL  V 
Sbjct: 179 QYVQEYGRIFGLKTVV 194

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
           + ++V VTG  GF  SW+   LL     V+G + +P    N  L+EL   ++ ++    D
Sbjct: 3   QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPN--LFELLNLAKKIEDHFGD 60

Query: 64  LLDYDSVKSAIVGCNG--VFHIAC-PAPSTTVPNPQMELLEPAVKGTLNVVKA-CLEAKV 119
           + D   ++ AI       VFH+A  P    +  +P +E  E  V GT+N+++A      V
Sbjct: 61  IRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADP-LETFETNVMGTVNLLEAIRAIGSV 119

Query: 120 KRVIVVSS 127
           K V+ V+S
Sbjct: 120 KAVVNVTS 127

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 46.7 bits (111), Expect = 7e-06
 Identities = 76/335 (22%), Positives = 125/335 (37%), Gaps = 58/335 (17%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASENLKLFK 61
           +V +TG  G + S +++ LL R + V       T R           E      NL + +
Sbjct: 2   KVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRR----------EHLPDHPNLTVVE 51

Query: 62  ADLLDYDSVKSAIVGCNGVF---HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
             + D   V        G F    +   A +   P+   E     V G  NVV+A  +A 
Sbjct: 52  GSIADKALVDKLF----GDFKPDAVVHTAAAYKDPDDWYEDTLTNVVGGANVVQAAKKAG 107

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK 178
           VKR+I   + +  GL P               +    ++   Y +SKT  E     + + 
Sbjct: 108 VKRLIYFQTALCYGLKP-----MQQPIRLDHPRAPPGSS---YAISKTAGE----YYLEL 155

Query: 179 TGLDVVT------ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL-ENKLRMIVDVRDV 231
           +G+D VT        P  V+GPL             + LK G +    +  R  V V+D+
Sbjct: 156 SGVDFVTFRLANVTGPRNVIGPL---------PTFYQRLKAGKKCFVTDTRRDFVFVKDL 206

Query: 232 AEALLLAYEKAEAEGRY-ICTAHMIRARDLVDK-LKSL-YPNYNYPKSFTEKEDEV---- 284
           A  +  A +     G Y   +   +  ++L D  +++L  P     +      D+V    
Sbjct: 207 ARVVDKALDGIRGHGAYHFSSGEDVSIKELFDAVVEALDLPLRPEVEVVELGPDDVPSIL 266

Query: 285 MLTSEKLQKLGW-SYRSLEETLVDSVESYKKVGIL 318
           +  S   Q  GW  +  L ET+  ++  Y K G+ 
Sbjct: 267 LDPSRTFQDFGWKEFTPLSETVSAALAWYDKHGVT 301

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 18/118 (15%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           V GA G +   V + L  R + V   +R  S  K A L         +++  AD +D  S
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSRSGS--KLAWL-------PGVEIVAADAMDASS 54

Query: 70  VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
           V +A  G + ++H A P         + E L P +    NVV A  EA   ++++  +
Sbjct: 55  VIAAARGADVIYHCANP------AYTRWEELFPPL--MENVVAAA-EANGAKLVLPGN 103

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 66/329 (20%), Positives = 120/329 (36%), Gaps = 53/329 (16%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ VTG  G + S +V++L  R Y  +   R   +       +L         F+ +  D
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGY-ENVVFRTSKE------LDLTDQEAVRAFFEKEKPD 53

Query: 67  YDSVKSAIVGCNGVFH-IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           Y    +A VG  G+   +  PA      N  +           NV+ A     VK+++ +
Sbjct: 54  YVIHLAAKVG--GIVANMTYPADFLRD-NLLIN---------DNVIHAAHRFGVKKLVFL 101

Query: 126 SSGVAVGLNPRWPK--GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
            S         +P    Q +DE+          TN  Y ++K         + K+ G D 
Sbjct: 102 GSSCI------YPDLAPQPIDESDLLT-GPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDY 154

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK------------LRMIVDVRDV 231
           +++ P  + GP        S  V+  L+++ +E+                 R  +   D+
Sbjct: 155 ISVMPTNLYGPHDNFDPENSH-VIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDL 213

Query: 232 AEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSF---TEKEDEVM-- 285
           A A++   E  +      + +   I  R+L + +  +     +       T K D     
Sbjct: 214 ARAIVFLLENYDEPIIVNVGSGVEISIRELAEAIAEV---VGFKGEIVFDTSKPDGQPRK 270

Query: 286 -LTSEKLQKLGWSYR-SLEETLVDSVESY 312
            L   KL+ LGW     LE+ + ++ E Y
Sbjct: 271 LLDVSKLRALGWFPFTPLEQGIRETYEWY 299

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 29/145 (20%)

Query: 8   VCVTGA----GGFLASWVVK------LLLSRDYFVHGTAREPSDEKNARLYELEKASENL 57
           V +TG     G  LA W+        +L+SR        R P+      + ELE     +
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSR--------RGPAPGAAELVAELEALGAEV 54

Query: 58  KLFKADLLDYDSVKSAIVGCN-------GVFHIACPAPSTTVPNPQMELLE----PAVKG 106
            +   D+ D D++ + +           GV H A       +     E  E    P V G
Sbjct: 55  TVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTG 114

Query: 107 TLNVVKACLEAKVKRVIVVSSGVAV 131
             N+ +   +  +   ++ SS   V
Sbjct: 115 AWNLHELTRDLDLGAFVLFSSVAGV 139

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 55/251 (21%), Positives = 79/251 (31%), Gaps = 54/251 (21%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ VTGA GF+   VV+ LL+R + V    R P           E A+      +  L D
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAAVRNP-----------EAAAALAGGVEVVLGD 50

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
               KS + G  GV  +   +      +        AV+ T  VV+A   A       VS
Sbjct: 51  LRDPKSLVAGAKGVDGVLLISGLLDGSDAFR-----AVQVT-AVVRAAEAAGAGVKHGVS 104

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
             V                   S              ++ +A  EA    + +G+   T+
Sbjct: 105 LSVLGADA-------------ASPSAL----------ARAKAAVEAA--LRSSGIPYTTL 139

Query: 187 -CPNLVLGPLLQSK--VNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEAL-LLAYEKA 242
                 LG           + L +I            +L  I  V DVAEAL       A
Sbjct: 140 RRAAFYLGAGAAFIEAAEAAGLPVIPR-------GIGRLSPI-AVDDVAEALAAALDAPA 191

Query: 243 EAEGRYICTAH 253
            A   Y     
Sbjct: 192 TAGRTYELAGP 202

Length = 275

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 2/122 (1%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           +TG  G   + V++  L  D  +        DEK       +  +  LK +  D+ DY S
Sbjct: 9   ITGGTGSFGNAVLRRFLDTD--IKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVRDYRS 66

Query: 70  VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV 129
           + +A  G + ++H A      +     ME ++  V GT NV++A +   VKRV+ +S+  
Sbjct: 67  ILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIANGVKRVVCLSTDK 126

Query: 130 AV 131
           AV
Sbjct: 127 AV 128

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 59/276 (21%), Positives = 98/276 (35%), Gaps = 70/276 (25%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKL 59
           M+L+ +   VTGA   +   +   L +    V          E  A   EL  A    ++
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAA--ELRAAGGEARV 58

Query: 60  FKADLLDYDSVKSAI-------VGCNGVFHIACPAPSTTVPNPQMEL------LEPAVKG 106
              D+ D  +V++ I          + + + A       +P  +M        ++  + G
Sbjct: 59  LVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLP--RMSEEDWDRVIDVNLTG 116

Query: 107 TLNVVKACLEAKVK----RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC 162
           T NVV+A L   +K    R++ +SS   V  NP    GQ               TN  Y 
Sbjct: 117 TFNVVRAALPPMIKARYGRIVNISSVSGVTGNP----GQ---------------TN--YS 155

Query: 163 LSK------TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE 216
            +K      T+A   ALE     G+ V  + P  +   + +            L +E   
Sbjct: 156 AAKAGVIGFTKA--LALE-LASRGITVNAVAPGFIDTDMTE-----------GLPEEVKA 201

Query: 217 SLENK--LRMIVDVRDVAEALL-LAYEKAEAEGRYI 249
            +  +  L  +    +VA A+  LA + A     YI
Sbjct: 202 EILKEIPLGRLGQPEEVANAVAFLASDAA----SYI 233

Length = 246

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 11/121 (9%)

Query: 8   VCVTGAGGFLA-SWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           V +TG GG+        L  S  + +    R P  E            E +K  +AD+ D
Sbjct: 2   VLITGGGGYFGFRLGCALAKSGVHVILFDIRRPQQE----------LPEGIKFIQADVRD 51

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
              ++ A+ G + VFHIA    S      +  + E  V+GT N+++ C+  +V R+I  S
Sbjct: 52  LSQLEKAVAGVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLIYTS 111

Query: 127 S 127
           +
Sbjct: 112 T 112

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 44/197 (22%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKLFKA 62
           EK R+C+TGAGGF+AS + + L +  +++       SD +KN  + E     E       
Sbjct: 20  EKLRICITGAGGFIASHIARRLKAEGHYIIA-----SDWKKNEHMSEDMFCHE---FHLV 71

Query: 63  DLLDYDSVKSAIVGCNGVFHIA---------CPAPSTTVPNPQMELLEPAVKGTLNVVKA 113
           DL   ++      G + VF++A             S  + N  M         + N+++A
Sbjct: 72  DLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI--------SFNMLEA 123

Query: 114 CLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW-------YCLSKT 166
                VKR    SS         +P+ + ++    S KE    ++ W       Y L K 
Sbjct: 124 ARINGVKRFFYASSACI------YPEFKQLETNV-SLKE----SDAWPAEPQDAYGLEKL 172

Query: 167 EAESEALEFGKKTGLDV 183
             E     + K  G++ 
Sbjct: 173 ATEELCKHYTKDFGIEC 189

Length = 370

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 43.3 bits (103), Expect = 9e-05
 Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 36/155 (23%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVH-------GTAREPSDEKNARLYELEKASENLKL 59
           +V VTG  G++ S  V+ LL   + V        G  +    +   + YE          
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH-KIALLKLQFKFYE---------- 50

Query: 60  FKADLLDYDSVKSAIV--GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKA 113
              DLLD   + +       + V H A    S +V     NP ++  +  V GTLN+++A
Sbjct: 51  --GDLLDRALLTAVFEENKIDAVVHFAA---SISVGESVQNP-LKYYDNNVVGTLNLIEA 104

Query: 114 CLEAKVKRVIVVSSGVAV-GLNPRWPKGQIMDETC 147
            L+  VK+  + SS  AV G     P    + ET 
Sbjct: 105 MLQTGVKK-FIFSSTAAVYGEPTTSP----ISETS 134

Length = 329

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 19/121 (15%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R+ VTGA G L   +   LLS+ + V G AR   D              +     AD+ D
Sbjct: 2   RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----------WPSSADFIAADIRD 51

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
             +V+SA+ G + V H A         N         + GT NV+KA  E    R++  S
Sbjct: 52  ATAVESAMTGADVVAHCAWVRGRNDHIN---------IDGTANVLKAMAETGTGRIVFTS 102

Query: 127 S 127
           S
Sbjct: 103 S 103

Length = 854

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 35/147 (23%), Positives = 52/147 (35%), Gaps = 36/147 (24%)

Query: 10  VTGA----GGFLASWVVK------LLLSRDYFVHGTAREPSDEKNARLYELEKASENLKL 59
           VTG     G  LA W+ +      +LLSR          P  E  A L ELE     + +
Sbjct: 5   VTGGLGGLGLELARWLAERGARHLVLLSRS-------GAPDPEAEALLAELEARGAEVTV 57

Query: 60  FKADLLDYDSVKSAIVGC-------NGVFHIACPAPSTTVPNPQMEL--------LEPAV 104
              D+ D D+V++ +           GV H    A           +        L P V
Sbjct: 58  VACDVSDRDAVRALLAEIRADGPPLRGVIH----AAGVLRDALLANMTAEDFARVLAPKV 113

Query: 105 KGTLNVVKACLEAKVKRVIVVSSGVAV 131
            G  N+ +A  +  +   ++ SS   V
Sbjct: 114 TGAWNLHEATRDRPLDFFVLFSSIAGV 140

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 45/204 (22%), Positives = 69/204 (33%), Gaps = 28/204 (13%)

Query: 10  VTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDE----------KNARLYELEKASENL 57
           +TGA GFL   +++ LL    +  ++   R    E              L++  KA E +
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 58  KLFKADLLD-----YDSVKSAIVG-CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVV 111
                DL +      D     +    + + H A  A    V     +L    V GT  V+
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNA--ATVNFVEPYS-DLRATNVLGTREVL 117

Query: 112 KACLEAKVKRVIVVSSGVA--VGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAE 169
           +   + K      VS+             K   +DE    +        N Y  SK  AE
Sbjct: 118 RLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDED---EPALLGGLPNGYTQSKWLAE 174

Query: 170 SEALEFGKKTGLDVVTICPNLVLG 193
               E     GL VV   P+++ G
Sbjct: 175 QLVREAAG--GLPVVIYRPSIITG 196

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 93/339 (27%), Positives = 140/339 (41%), Gaps = 50/339 (14%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDY-----FVHGTAREPSDEKNARLYELEKASENLK 58
           E + + +TGA GF+AS V   L+ R+Y      V       S+ KN  L    K+S N K
Sbjct: 5   EPKNILITGAAGFIASHVANRLI-RNYPDYKIVVLDKLDYCSNLKN--LNP-SKSSPNFK 60

Query: 59  LFKADLLDYDSVKSAIV--GCNGVFHIACPAPSTTVPNP---QMELLEPAVKGTLNVVKA 113
             K D+   D V   ++  G + + H A     T V N      E  +  + GT  +++A
Sbjct: 61  FVKGDIASADLVNYLLITEGIDTIMHFAA---QTHVDNSFGNSFEFTKNNIYGTHVLLEA 117

Query: 114 C-LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR-TTNNWYCLSKTEAESE 171
           C +  +++R I VS+            G+  ++    + E  +    N Y  +K  AE  
Sbjct: 118 CKVTGQIRRFIHVSTDEVY--------GETDEDADVGNHEASQLLPTNPYSATKAGAEML 169

Query: 172 ALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIK---LLKEGYESLE-----NKLR 223
            + +G+  GL V+T   N V GP      N     LI    LL    + L      + +R
Sbjct: 170 VMAYGRSYGLPVITTRGNNVYGP------NQFPEKLIPKFILLAMQGKPLPIHGDGSNVR 223

Query: 224 MIVDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKED 282
             +   DVAEA  +   K E    Y I T    R  D+   +  L+   +  KS    E+
Sbjct: 224 SYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLF-GLDPEKSIKFVEN 282

Query: 283 ------EVMLTSEKLQKLGWSYR-SLEETLVDSVESYKK 314
                    L  +KL+KLGW  R S EE L  ++E Y  
Sbjct: 283 RPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTS 321

Length = 668

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 40.9 bits (97), Expect = 2e-04
 Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 30/144 (20%)

Query: 10  VTG-AGGF---LASWVVK------LLLSRDYFVHGTAREPSDEKNARLY-ELEKASENLK 58
           +TG  GG    LA W+ +      +LLSR          P     A L  ELE A   + 
Sbjct: 5   ITGGLGGLGRALARWLAERGARRLVLLSR--------SGPDAPGAAALLAELEAAGARVT 56

Query: 59  LFKADLLDYDSVKSAIVGC-------NGVFHIACPAPSTTVPNPQMELLE----PAVKGT 107
           +   D+ D D++ + +           GV H A       + +   E       P   G 
Sbjct: 57  VVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGA 116

Query: 108 LNVVKACLEAKVKRVIVVSSGVAV 131
            N+ +   +  +   ++ SS   V
Sbjct: 117 WNLHELTADLPLDFFVLFSSIAGV 140

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 11/137 (8%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
              + + +TG  G      +  LL   Y          DE      + +  +  L+ F  
Sbjct: 2   FNNKSILITGGTGSFGKAFISRLLEN-YNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIG 60

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEAK 118
           D+ D + +  A     GV ++   A    VP    NP  E +   + G  NV+ A ++  
Sbjct: 61  DVRDKERLTRA---LRGVDYVVHAAALKQVPAAEYNP-FECIRTNINGAQNVIDAAIDNG 116

Query: 119 VKRVIVVSSGVAVGLNP 135
           VKRV+ +S+  A   NP
Sbjct: 117 VKRVVALSTDKAA--NP 131

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL 64
            + V V GA G     +V+ LL++ + V    R+    K +          +L++ +AD+
Sbjct: 17  TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL-----PQDPSLQIVRADV 71

Query: 65  LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEP-AVK--GTLNVVKACLEAKVKR 121
            +  S K      +    + C     T      +   P  V   GT+N+V+AC +A V R
Sbjct: 72  TE-GSDKLVEAIGDDSDAVIC----ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTR 126

Query: 122 VIVVSS----GVAVG--LNP 135
            I+VSS    G A+G  LNP
Sbjct: 127 FILVSSILVNGAAMGQILNP 146

Length = 251

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 4  EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD--EKNARLYELEKASE-NLKLF 60
            +   +TG  G   S++ +LLL + Y VHG  R  S        LYE    ++  L L 
Sbjct: 1  MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLH 60

Query: 61 KADLLDYDSVKSAI 74
            DL D  ++   +
Sbjct: 61 YGDLTDSSNLLRIL 74

Length = 345

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ VTG  G++ S  V+ LL   + V       +  + A      +    +   + DL D
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRG--ERITPVTFVEGDLRD 58

Query: 67  YDSVKSAIVG--CNGVFHIACPA---PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR 121
            + +         + V H A       S   P   ++     V GTLN+++A  +A VK+
Sbjct: 59  RELLDRLFEEHKIDAVIHFAGLIAVGESVQKP---LKYYRNNVVGTLNLLEAMQQAGVKK 115

Query: 122 VIVVSSGVAVGLNPR 136
             + SS  AV   P 
Sbjct: 116 -FIFSSSAAVYGEPS 129

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 24/123 (19%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGT--AREPSDEKNARLYELEKASENLKLFKADLL 65
           V + GA G +A     +LL     V  T   R            L   S  + + + D L
Sbjct: 3   VLILGANGEIAREATTMLLENSN-VELTLFLRNAHRL-------LHLKSARVTVVEGDAL 54

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           + D +K+A+ G + V+     A        Q            NVV+A     VKR+I  
Sbjct: 55  NSDDLKAAMRGQDVVY-----ANLGGTDLDQQ---------AENVVQAMKAVGVKRLIWT 100

Query: 126 SSG 128
           +S 
Sbjct: 101 TSL 103

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 22/129 (17%)

Query: 6   ERVCVTGAGGFLASWVVKLLLSRDYFV-----HGTAREPSDEKNARLYELEKASENLKLF 60
           +R+ +TG  GFL S +   LL   + V       T R    ++N           N +  
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGR----KRNIEHLI---GHPNFEFI 53

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
           + D+ +   ++      + ++H+ACPA P     NP ++ L+  V GTLN++   L  +V
Sbjct: 54  RHDVTEPLYLE-----VDQIYHLACPASPVHYQYNP-IKTLKTNVLGTLNMLG--LAKRV 105

Query: 120 K-RVIVVSS 127
             RV++ S+
Sbjct: 106 GARVLLAST 114

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 40/241 (16%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R  VTGAG  +    VK L      V   +R  +D     L  L +    ++    DL D
Sbjct: 9   RALVTGAGKGIGRATVKALAKAGARVVAVSRTQAD-----LDSLVRECPGIEPVCVDLSD 63

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
           +D+ + A +G  G   +        V N  + +L+P ++ T        +  V+ VI VS
Sbjct: 64  WDATEEA-LGSVGPVDL-------LVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVS 115

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW-YCLSKTEAESEALEFGKKTGLDVVT 185
             VA G+  R   G I++ +  S       TN+  YC +             K  LD++T
Sbjct: 116 QIVARGMIARGVPGSIVNVS--SQASQRALTNHTVYCST-------------KAALDMLT 160

Query: 186 ICPNLVLGPLLQSKVNT--SSLVLIKLLKEGYESLENKLRMI--------VDVRDVAEAL 235
               L LGP  + +VN+   ++V+  + ++ +   E   +M+         +V DV  A+
Sbjct: 161 KVMALELGP-HKIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAI 219

Query: 236 L 236
           L
Sbjct: 220 L 220

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 12/120 (10%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           V VTGA G++   +V  LL   + V    R P  EK A        SE + + + DL D 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSP--EKLADRPW----SERVTVVRGDLEDP 54

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
           +S+++A+ G +  +++      +       E  +       N  +A   A VKR+I +  
Sbjct: 55  ESLRAALEGIDTAYYLV----HSMGSGGDFEEADRRA--ARNFARAARAAGVKRIIYLGG 108

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 57/287 (19%), Positives = 101/287 (35%), Gaps = 39/287 (13%)

Query: 8   VCVTGAGGFLASWVVKLLL--SRDYFVHGTAREPSDE----------KNARLYELEKASE 55
           V +TGA GFL +++++ LL  S    V    R  S+E          ++ RL+  + A E
Sbjct: 2   VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLARE 61

Query: 56  NLKLFKADL----LDYDSVKSAIVG--CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLN 109
            +++   DL    L     +   +    + + H            P  EL    V GT  
Sbjct: 62  RIEVVAGDLSEPRLGLSDAEWERLAENVDTIVH---NGALVNWVYPYSELRGANVLGTRE 118

Query: 110 VVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAE 169
           V++     + K +  VS+                D+   +           Y  SK  AE
Sbjct: 119 VLRLAASGRAKPLHYVSTISV--GAAIDLSTVTEDDATVTPPPGLAGG---YAQSKWVAE 173

Query: 170 SEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-----YESLENKLRM 224
               E     GL V  + P  +LG      +N+S ++  +++K       Y         
Sbjct: 174 LLVREAS-DRGLPVTIVRPGRILGNSYTGAINSSDILW-RMVKGCLALGAYPQSPELTED 231

Query: 225 IVDVRDVAEALLLAYEKAEAEGRYICTAHM-----IRARDLVDKLKS 266
           +  V  VA A+++   +  A        H+     +   + +D L+ 
Sbjct: 232 LTPVDFVARAIVVLSSRPAASAGGP-VFHVVNPEPVSLDEFLDWLER 277

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           VTGA G + S V   LL     V    R  SDE+ A L     A+   ++   DL D   
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVR--SDERAAAL-----AARGAEVVVGDLDDPAV 55

Query: 70  VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV 129
           + +A+ G + VF +A PAP+        +     V+       A  EA VKRV+ +SS  
Sbjct: 56  LAAALAGVDAVFFLAPPAPTA-------DARPGYVQAAEAFASALREAGVKRVVNLSS-- 106

Query: 130 AVGLNPRWPKGQI 142
            VG +P  P G I
Sbjct: 107 -VGADPESPSGLI 118

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 17/68 (25%)

Query: 7  RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
          ++ +TGA G L   +V+LL  R Y V GT R                     LFK DL D
Sbjct: 1  KILITGATGMLGRALVRLLKERGYEVIGTGR-----------------SRASLFKLDLTD 43

Query: 67 YDSVKSAI 74
           D+V+ AI
Sbjct: 44 PDAVEEAI 51

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 38.3 bits (90), Expect = 0.004
 Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 20/138 (14%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFV------HGTAREPSDEKNARLYELEKASENLKLF 60
           +V VTG  G++ S  V  LL   Y V          RE        L  +EK    ++ +
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREA-------LPRIEK--IRIEFY 51

Query: 61  KADLLDYDSVKSAI--VGCNGVFHIAC-PAPSTTVPNPQMELLEPAVKGTLNVVKACLEA 117
           + D+ D  ++         + V H A   A   +V  P ++  +  V GTLN+++A    
Sbjct: 52  EGDIRDRAALDKVFAEHKIDAVIHFAALKAVGESVQKP-LKYYDNNVVGTLNLLEAMRAH 110

Query: 118 KVKRVIVVSSGVAVGLNP 135
            VK   V SS  AV   P
Sbjct: 111 GVKN-FVFSSSAAVYGEP 127

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 55/267 (20%), Positives = 80/267 (29%), Gaps = 72/267 (26%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL--EKASENLKLF 60
           L+ +   +TGA   +     + L      V   AR     +  RL  L  E  +      
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAAR-----REERLEALADEIGAGAALAL 58

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVP------NPQMELLEPA----------- 103
             D+ D  +V++AI             P           N  + L +P            
Sbjct: 59  ALDVTDRAAVEAAIEA----------LPEEFGRIDILVNNAGLALGDPLDEADLDDWDRM 108

Query: 104 ----VKGTLNVVKACLEAKVKR---VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT 156
               VKG LN  +A L   V+R    I+    +A G  P                     
Sbjct: 109 IDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA-GRYP-------------------YP 148

Query: 157 TNNWYCLSK--TEAESEALEFG-KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKE 213
               Y  +K    A S  L      TG+ V  I P LV            S V  +   E
Sbjct: 149 GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEF-------STVRFEGDDE 201

Query: 214 GYESLENKLRMIVDVRDVAEALLLAYE 240
             + +      +    D+AEA+L A  
Sbjct: 202 RADKVYKGGTAL-TPEDIAEAVLFAAT 227

Length = 246

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	100.0
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	100.0
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.98
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
PRK12320	699	hypothetical protein; Provisional	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PLN02503	605	fatty acyl-CoA reductase 2	99.95
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.94
PRK08263	275	short chain dehydrogenase; Provisional	99.94
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.94
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.94
PRK06180	277	short chain dehydrogenase; Provisional	99.94
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.94
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK09135	249	pteridine reductase; Provisional	99.94
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.94
PRK05875	276	short chain dehydrogenase; Provisional	99.94
PRK07806	248	short chain dehydrogenase; Provisional	99.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.94
PRK05876	275	short chain dehydrogenase; Provisional	99.94
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.94
PRK06914	280	short chain dehydrogenase; Provisional	99.93
PRK07067	257	sorbitol dehydrogenase; Provisional	99.93
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK06138	252	short chain dehydrogenase; Provisional	99.93
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK08628	258	short chain dehydrogenase; Provisional	99.93
PRK07774	250	short chain dehydrogenase; Provisional	99.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.93
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK06182	273	short chain dehydrogenase; Validated	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PRK06701	290	short chain dehydrogenase; Provisional	99.93
PRK07890	258	short chain dehydrogenase; Provisional	99.93
PRK06194	287	hypothetical protein; Provisional	99.93
PRK12746	254	short chain dehydrogenase; Provisional	99.93
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.93
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.93
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.92
PRK06179	270	short chain dehydrogenase; Provisional	99.92
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PRK12937	245	short chain dehydrogenase; Provisional	99.92
PRK06123	248	short chain dehydrogenase; Provisional	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PRK06114	254	short chain dehydrogenase; Provisional	99.92
PRK09134	258	short chain dehydrogenase; Provisional	99.92
PRK12827	249	short chain dehydrogenase; Provisional	99.92
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.92
PRK12829	264	short chain dehydrogenase; Provisional	99.92
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.92
PRK06500	249	short chain dehydrogenase; Provisional	99.92
PRK07060	245	short chain dehydrogenase; Provisional	99.91
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.91
PRK12939	250	short chain dehydrogenase; Provisional	99.91
PRK07985	294	oxidoreductase; Provisional	99.91
PLN02253	280	xanthoxin dehydrogenase	99.91
PRK07035	252	short chain dehydrogenase; Provisional	99.91
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.91
PRK12828	239	short chain dehydrogenase; Provisional	99.91
PRK07478	254	short chain dehydrogenase; Provisional	99.91
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07856	252	short chain dehydrogenase; Provisional	99.91
PRK06172	253	short chain dehydrogenase; Provisional	99.91
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.91
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.91
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.91
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.91
PRK08589	272	short chain dehydrogenase; Validated	99.91
PRK07814	263	short chain dehydrogenase; Provisional	99.91
PRK12747	252	short chain dehydrogenase; Provisional	99.91
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.91
PRK05993	277	short chain dehydrogenase; Provisional	99.91
PRK06181	263	short chain dehydrogenase; Provisional	99.91
PRK06841	255	short chain dehydrogenase; Provisional	99.91
PRK05867	253	short chain dehydrogenase; Provisional	99.91
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK06398	258	aldose dehydrogenase; Validated	99.91
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.91
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.91
PRK05717	255	oxidoreductase; Validated	99.91
PRK07825	273	short chain dehydrogenase; Provisional	99.91
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07024	257	short chain dehydrogenase; Provisional	99.91
PRK08219	227	short chain dehydrogenase; Provisional	99.9
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.9
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.9
PRK07063	260	short chain dehydrogenase; Provisional	99.9
PRK07576	264	short chain dehydrogenase; Provisional	99.9
PRK08339	263	short chain dehydrogenase; Provisional	99.9
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.9
PRK08643	256	acetoin reductase; Validated	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
PRK12743	256	oxidoreductase; Provisional	99.9
PRK08265	261	short chain dehydrogenase; Provisional	99.9
PRK05650	270	short chain dehydrogenase; Provisional	99.9
PRK06196	315	oxidoreductase; Provisional	99.9
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK09291	257	short chain dehydrogenase; Provisional	99.9
PRK06523	260	short chain dehydrogenase; Provisional	99.9
PRK08278	273	short chain dehydrogenase; Provisional	99.9
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.9
PRK08264	238	short chain dehydrogenase; Validated	99.9
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.9
PRK05866	293	short chain dehydrogenase; Provisional	99.9
PRK06139	330	short chain dehydrogenase; Provisional	99.9
PRK07109	334	short chain dehydrogenase; Provisional	99.9
PRK08226	263	short chain dehydrogenase; Provisional	99.9
PRK07454	241	short chain dehydrogenase; Provisional	99.9
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.89
PRK06101	240	short chain dehydrogenase; Provisional	99.89
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.89
PRK10538	248	malonic semialdehyde reductase; Provisional	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PRK12742	237	oxidoreductase; Provisional	99.89
PRK09242	257	tropinone reductase; Provisional	99.89
PRK12744	257	short chain dehydrogenase; Provisional	99.89
PRK06198	260	short chain dehydrogenase; Provisional	99.89
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.89
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
PRK07904	253	short chain dehydrogenase; Provisional	99.89
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK06949	258	short chain dehydrogenase; Provisional	99.89
PRK06057	255	short chain dehydrogenase; Provisional	99.89
PRK07677	252	short chain dehydrogenase; Provisional	99.89
PRK08267	260	short chain dehydrogenase; Provisional	99.89
PRK08324	681	short chain dehydrogenase; Validated	99.89
PRK06197	306	short chain dehydrogenase; Provisional	99.89
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.89
PRK09072	263	short chain dehydrogenase; Provisional	99.88
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.88
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.88
PRK05872	296	short chain dehydrogenase; Provisional	99.88
PRK08017	256	oxidoreductase; Provisional	99.88
PRK05693	274	short chain dehydrogenase; Provisional	99.88
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.88
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.88
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.88
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.88
PRK07062	265	short chain dehydrogenase; Provisional	99.88
PRK07041	230	short chain dehydrogenase; Provisional	99.87
PRK08251	248	short chain dehydrogenase; Provisional	99.87
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.87
PRK07069	251	short chain dehydrogenase; Validated	99.87
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.87
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PRK08703	239	short chain dehydrogenase; Provisional	99.87
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PRK06924	251	short chain dehydrogenase; Provisional	99.87
PRK05854	313	short chain dehydrogenase; Provisional	99.87
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PRK07791	286	short chain dehydrogenase; Provisional	99.87
PRK06483	236	dihydromonapterin reductase; Provisional	99.87
PRK06484	520	short chain dehydrogenase; Validated	99.87
PRK07831	262	short chain dehydrogenase; Provisional	99.87
PRK06125	259	short chain dehydrogenase; Provisional	99.87
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07023	243	short chain dehydrogenase; Provisional	99.86
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.86
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK06940	275	short chain dehydrogenase; Provisional	99.86
KOG2774	366	consensus NAD dependent epimerase [General functio	99.86
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.86
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.86
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.86
PRK07832	272	short chain dehydrogenase; Provisional	99.86
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.85
PRK07201	657	short chain dehydrogenase; Provisional	99.85
PRK07578	199	short chain dehydrogenase; Provisional	99.84
PRK08303	305	short chain dehydrogenase; Provisional	99.84
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.84
PRK05855	582	short chain dehydrogenase; Validated	99.84
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.84
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.84
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK06953	222	short chain dehydrogenase; Provisional	99.83
PRK05884	223	short chain dehydrogenase; Provisional	99.83
PRK12367	245	short chain dehydrogenase; Provisional	99.83
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.83
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.83
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK05599	246	hypothetical protein; Provisional	99.83
PLN02780	320	ketoreductase/ oxidoreductase	99.82
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.82
PRK08177	225	short chain dehydrogenase; Provisional	99.82
PRK06484	520	short chain dehydrogenase; Validated	99.82
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.82
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.82
PRK08862	227	short chain dehydrogenase; Provisional	99.8
KOG0725	270	consensus Reductases with broad range of substrate	99.8
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.8
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.79
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.79
PLN00015	308	protochlorophyllide reductase	99.77
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.77
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.77
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.77
COG2910	211	Putative NADH-flavin reductase [General function p	99.75
KOG1208	314	consensus Dehydrogenases with different specificit	99.75
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.75
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.73
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.71
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.71
COG1028	251	FabG Dehydrogenases with different specificities (	99.71
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.7
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.69
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.66
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.66
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.64
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.63
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.62
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.58
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.55
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.5
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.48
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.44
PRK06720	169	hypothetical protein; Provisional	99.42
PTZ00325	321	malate dehydrogenase; Provisional	99.28
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.23
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.19
PRK08309	177	short chain dehydrogenase; Provisional	99.13
PLN00106	323	malate dehydrogenase	99.13
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.12
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.98
PRK09620	229	hypothetical protein; Provisional	98.89
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.84
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.76
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.74
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.71
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.62
PRK05086	312	malate dehydrogenase; Provisional	98.6
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.57
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.52
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.48
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.47
PRK14982	340	acyl-ACP reductase; Provisional	98.44
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.43
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.4
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.38
COG3268	382	Uncharacterized conserved protein [Function unknow	98.25
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.23
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.22
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.21
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.2
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.16
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.12
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.06
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.03
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.0
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.98
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.9
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.88
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.87
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.84
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.81
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.79
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.78
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.75
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.74
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.73
PRK05442	326	malate dehydrogenase; Provisional	97.72
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.71
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.69
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.69
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.67
PTZ00117	319	malate dehydrogenase; Provisional	97.66
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.62
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.61
PRK09496	453	trkA potassium transporter peripheral membrane com	97.6
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.58
PLN02602	350	lactate dehydrogenase	97.55
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.54
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.53
PRK06223	307	malate dehydrogenase; Reviewed	97.5
PRK09496	453	trkA potassium transporter peripheral membrane com	97.49
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.47
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.47
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.46
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.46
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.41
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.41
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.4
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.4
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.37
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.37
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.35
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.35
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.34
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.33
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.31
PRK04148	134	hypothetical protein; Provisional	97.31
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.31
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.3
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.3
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.3
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.28
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.27
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.24
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.21
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.21
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.18
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.18
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.18
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.15
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.14
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.14
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.11
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.08
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.07
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.07
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.07
PLN02383	344	aspartate semialdehyde dehydrogenase	97.06
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.06
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.03
PRK08223	287	hypothetical protein; Validated	97.03
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.03
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.02
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.02
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.01
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	96.99
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.99
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.98
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.98
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.96
PRK08655	437	prephenate dehydrogenase; Provisional	96.95
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.95
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.95
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.94
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.94
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.94
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.93
PRK08328	231	hypothetical protein; Provisional	96.93
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.92
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.91
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.9
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.9
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.89
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.89
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.89
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.87
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.85
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.84
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.83
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.82
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.82
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.81
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.81
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.79
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.78
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.77
PRK10669	558	putative cation:proton antiport protein; Provision	96.76
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.76
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.74
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.74
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.73
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.72
PRK07574	385	formate dehydrogenase; Provisional	96.72
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.72
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.71
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.69
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.69
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.68
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.66
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.66
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.65
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.64
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.63
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.62
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.62
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.62
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.59
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.58
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.57
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.56
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.54
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.53
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.52
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.5
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.49
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.48
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.47
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.46
PLN00203	519	glutamyl-tRNA reductase	96.45
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.44
PRK07877	722	hypothetical protein; Provisional	96.43
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.41
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.39
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.39
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.38
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.38
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.37
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.36
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.35
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.34
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.33
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.32
PRK06153	393	hypothetical protein; Provisional	96.3
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.3
PRK13243	333	glyoxylate reductase; Reviewed	96.28
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.27
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.25
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.25
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.25
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.23
PRK06849	389	hypothetical protein; Provisional	96.23
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.2
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.2
PRK07411	390	hypothetical protein; Validated	96.19
PLN02928	347	oxidoreductase family protein	96.19
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.18
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.18
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.16
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.15
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
PLN02256	304	arogenate dehydrogenase	96.14
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.14
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.14
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.13
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.12
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.12

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4e-52  Score=337.08  Aligned_cols=301  Identities=18%  Similarity=0.229  Sum_probs=257.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      |++|||||.||||++++++++++.  .+|++++.-.-......+..+.. .++..++++|++|.+.+..+++  ++|+|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            579999999999999999999875  55788887655555556655543 3689999999999999999998  599999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |+||....+.+...+..++++|+.||.+|++++++...+ ||+|+||..+|+.-..  .+..++|++|.+|      .+|
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~--~~~~FtE~tp~~P------sSP  151 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGL--DDDAFTETTPYNP------SSP  151 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccC--CCCCcccCCCCCC------CCC
Confidence            999999888665555999999999999999999999754 9999999665543321  2347899998887      888


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCC--cccccccHHHHHHHHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LEN--KLRMIVDVRDVAEALLL  237 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~  237 (319)
                      |++||++++.+++.|.+.||++++|.|+++-|||.+.+. ++++.++.+++.|+++. +|+  +.|||+||+|-|+++..
T Consensus       152 YSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~  230 (340)
T COG1088         152 YSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDL  230 (340)
T ss_pred             cchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHH
Confidence            999999999999999999999999999999999987655 78899999999999888 555  99999999999999999


Q ss_pred             hhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCC--------CCCCCCCCCCCceeechHHHHH-hCCccc-cHHHHHH
Q 020924          238 AYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNY--------NYPKSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLV  306 (319)
Q Consensus       238 ~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~--------~~~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~  306 (319)
                      ++.+...+.+||++| ...+-.|+++.+.+.+++.        ..-..+++....+.+|.+|++. |||.|. +|++||+
T Consensus       231 Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~Glr  310 (340)
T COG1088         231 VLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLR  310 (340)
T ss_pred             HHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHH
Confidence            999998888998875 7889999999999999852        2234455566789999999877 999999 9999999


Q ss_pred             HHHHHHHHcC
Q 020924          307 DSVESYKKVG  316 (319)
Q Consensus       307 ~~~~~~~~~~  316 (319)
                      ++++||.+|.
T Consensus       311 kTv~WY~~N~  320 (340)
T COG1088         311 KTVDWYLDNE  320 (340)
T ss_pred             HHHHHHHhch
Confidence            9999999874

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=4.6e-51  Score=341.98  Aligned_cols=315  Identities=51%  Similarity=0.816  Sum_probs=277.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh-HHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK-NARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .+++|+|||||||||+|++++|+++||.|+++.|++.+.+ ...+.+++...++++.+.+|++|++++..++++||.|+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            5789999999999999999999999999999999988643 245777777778899999999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccC-CCCCCCcccCCCCCCCccccccCCch
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLN-PRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      .|.+....... +..+..+.++.|+.|++++|++.. ++|+|++||++++... +.+.....++|++|.+++++.....+
T Consensus        85 ~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~  163 (327)
T KOG1502|consen   85 TASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW  163 (327)
T ss_pred             eCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence            99987765333 445899999999999999999986 9999999999888765 55557789999999999888877799


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhc
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      |..||..+|..+++++++.+++.+.+.|+.|+||...+........+...++|....+.+....|||++|+|.+.+.+++
T Consensus       164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E  243 (327)
T KOG1502|consen  164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALE  243 (327)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999877656666777788888766666666669999999999999999


Q ss_pred             cCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCCCC----CceeechHHHHHhC-CccccHHHHHHHHHHHHHHc
Q 020924          241 KAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKE----DEVMLTSEKLQKLG-WSYRSLEETLVDSVESYKKV  315 (319)
Q Consensus       241 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~----~~~~~d~~k~~~lg-~~~~~~~~~l~~~~~~~~~~  315 (319)
                      ++...|+|+|.+...++.|+++++.+.+|.+++|.......    ....++++|+++|| |++++++|.+.+++.++++.
T Consensus       244 ~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~  323 (327)
T KOG1502|consen  244 KPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREK  323 (327)
T ss_pred             CcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhcccceecChHHHHHHHHHHHHHh
Confidence            99999999999988889999999999999888776655542    22468999999977 88889999999999999999


Q ss_pred             CCCC
Q 020924          316 GILN  319 (319)
Q Consensus       316 ~~~~  319 (319)
                      +++.
T Consensus       324 ~~l~  327 (327)
T KOG1502|consen  324 GLLL  327 (327)
T ss_pred             cCCC
Confidence            8864

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=4.3e-50  Score=353.38  Aligned_cols=312  Identities=43%  Similarity=0.740  Sum_probs=246.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .++|+|||||||||||++++++|+++|++|+++.|+.+......+..+.....+++++.+|++|.+.+.++++++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            45789999999999999999999999999999999765322222222221124688899999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +|+...    .++ ...+++|+.++.+++++|++.++++|||+||.+++|+.+......+++|+++...+.+..+.++|+
T Consensus        88 ~A~~~~----~~~-~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~  162 (342)
T PLN02214         88 TASPVT----DDP-EQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC  162 (342)
T ss_pred             ecCCCC----CCH-HHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence            998642    233 778999999999999999999999999999976666543211224688887654443445678899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .||..+|.+++.++++++++++++||+++|||............+.+...+.....+++.++|||++|+|++++.+++++
T Consensus       163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~  242 (342)
T PLN02214        163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAP  242 (342)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCc
Confidence            99999999999998888999999999999999765332111222334455555556677899999999999999999987


Q ss_pred             CCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCC----CCCCceeechHHHHHhCCccccHHHHHHHHHHHHHHcCCC
Q 020924          243 EAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFT----EKEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       243 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~----~~~~~~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~~~~~  318 (319)
                      ..+++||+++...+++|+++.+.+.+|..+++....    .......+|++|+++|||+|++++|+|+++++|+++.+.+
T Consensus       243 ~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~~lee~i~~~~~~~~~~~~~  322 (342)
T PLN02214        243 SASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHL  322 (342)
T ss_pred             ccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCcccCHHHHHHHHHHHHHHcCCC
Confidence            666799888778999999999999998554443321    2224467899999889999999999999999999999876


Q ss_pred             C
Q 020924          319 N  319 (319)
Q Consensus       319 ~  319 (319)
                      +
T Consensus       323 ~  323 (342)
T PLN02214        323 A  323 (342)
T ss_pred             C
Confidence            4

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.8e-50  Score=328.01  Aligned_cols=290  Identities=23%  Similarity=0.277  Sum_probs=236.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+||||||+||||||.|.+|++.|++|++++.-... ....+...     ..+++++|+.|.+.+.+.|+  ++|.|||+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g-~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~idaViHF   74 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNG-HKIALLKL-----QFKFYEGDLLDRALLTAVFEENKIDAVVHF   74 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCC-CHHHhhhc-----cCceEEeccccHHHHHHHHHhcCCCEEEEC
Confidence            579999999999999999999999999999975443 33343322     15899999999999999997  68999999


Q ss_pred             cccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           84 ACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        84 a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      ||...... ..+| ..+++.|+.||.+|+++|+++++++|||-|| +++|+.+   ...|++|++|..|      .+|||
T Consensus        75 Aa~~~VgESv~~P-l~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt-AavYG~p---~~~PI~E~~~~~p------~NPYG  143 (329)
T COG1087          75 AASISVGESVQNP-LKYYDNNVVGTLNLIEAMLQTGVKKFIFSST-AAVYGEP---TTSPISETSPLAP------INPYG  143 (329)
T ss_pred             ccccccchhhhCH-HHHHhhchHhHHHHHHHHHHhCCCEEEEecc-hhhcCCC---CCcccCCCCCCCC------CCcch
Confidence            99887763 3455 8999999999999999999999999999666 6677776   4689999998886      78899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhcCccc--c--------CCcccc
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKEGYES--L--------ENKLRM  224 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~--~--------~~~~~~  224 (319)
                      .||+..|++++.+++.++++++++|.+|+-|......        ...++..+..++...+..  +        |...||
T Consensus       144 ~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRD  223 (329)
T COG1087         144 RSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRD  223 (329)
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeee
Confidence            9999999999999999999999999999988643321        123333333333333211  2        337899


Q ss_pred             cccHHHHHHHHHHhhccCCCCc---eEEEe-cccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceeechHHHHH-hC
Q 020924          225 IVDVRDVAEALLLAYEKAEAEG---RYICT-AHMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVMLTSEKLQK-LG  295 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~~~---~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d~~k~~~-lg  295 (319)
                      ||||.|+|++.+.+++....+|   +||++ |...|++|+++.+.++.| .++|.    .++.+.+.++.|++|+++ ||
T Consensus       224 YIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg-~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lg  302 (329)
T COG1087         224 YIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIPVEIAPRRAGDPAILVADSSKARQILG  302 (329)
T ss_pred             eeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhC-CcCceeeCCCCCCCCceeEeCHHHHHHHhC
Confidence            9999999999999998654433   68776 799999999999999999 34443    445556779999999999 99


Q ss_pred             Cccc--cHHHHHHHHHHHHH
Q 020924          296 WSYR--SLEETLVDSVESYK  313 (319)
Q Consensus       296 ~~~~--~~~~~l~~~~~~~~  313 (319)
                      |+|+  ++++.+++.++|..
T Consensus       303 w~p~~~~L~~ii~~aw~W~~  322 (329)
T COG1087         303 WQPTYDDLEDIIKDAWDWHQ  322 (329)
T ss_pred             CCcccCCHHHHHHHHHHHhh
Confidence            9998  89999999999998

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=9.2e-49  Score=343.24  Aligned_cols=316  Identities=43%  Similarity=0.690  Sum_probs=247.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh-HHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK-NARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |+-.+|+|||||||||||++++++|+++|++|+++.|+..... ...+........+++++.+|++|.+.+..+++++|+
T Consensus         1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   80 (322)
T PLN02986          1 MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDA   80 (322)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCE
Confidence            6667899999999999999999999999999999999866421 111111111134789999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEecccccc-ccCCCCCCCcccCCCCCCCccccccC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |||+|+..... ..++....+++|+.++.+++++|++. +++|||++||.+++ ++.+......+++|+++..|..+..+
T Consensus        81 vih~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~  159 (322)
T PLN02986         81 VFHTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRET  159 (322)
T ss_pred             EEEeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcc
Confidence            99999975332 22343457899999999999999986 78999999998664 33321112456888887665433345


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  237 (319)
                      .++|+.||..+|.+++++.++++++++++||+++|||...+.......++.....+.+. .+++.++|||++|+|++++.
T Consensus       160 ~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~  238 (322)
T PLN02986        160 KNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIK  238 (322)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHH
Confidence            67899999999999999998889999999999999997654333334556666666543 45677899999999999999


Q ss_pred             hhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCCCC-Cc--eeechHHHHHhCCccccHHHHHHHHHHHHHH
Q 020924          238 AYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKE-DE--VMLTSEKLQKLGWSYRSLEETLVDSVESYKK  314 (319)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-~~--~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~  314 (319)
                      +++++...++||+++..+|+.|+++.+.+.+|...++...+... ..  ..+|++|+++|||+|++|+|+|+++++|+++
T Consensus       239 al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg~~~~~l~e~~~~~~~~~~~  318 (322)
T PLN02986        239 ALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGVEFTPMKSSLRDTILSLKE  318 (322)
T ss_pred             HhcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccccccCCccCHHHHHHcCCcccCHHHHHHHHHHHHHH
Confidence            99987666799998889999999999999998655544322211 12  3489999988999999999999999999999


Q ss_pred             cCCC
Q 020924          315 VGIL  318 (319)
Q Consensus       315 ~~~~  318 (319)
                      .|++
T Consensus       319 ~~~~  322 (322)
T PLN02986        319 KCLL  322 (322)
T ss_pred             cCCC
Confidence            8875

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=9.5e-49  Score=346.00  Aligned_cols=302  Identities=16%  Similarity=0.164  Sum_probs=236.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-----ccCCCeEEEEccCCChhhHHHHhcCc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-----KASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      +++|+|||||||||||++|+++|+++|++|++++|...... ..+....     ....+++++.+|++|.+.+..+++++
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQ-HNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcch-hhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            46789999999999999999999999999999998654211 1111110     01136789999999999999999999


Q ss_pred             ceEEEecccCCCCCC-CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccccc
Q 020924           78 NGVFHIACPAPSTTV-PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        78 d~vi~~a~~~~~~~~-~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  156 (319)
                      |+|||+|+....... .++ ...+++|+.|+.+++++|++.++++|||+||.++|+..    .+.+..|+++..|     
T Consensus        92 d~ViHlAa~~~~~~~~~~~-~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~----~~~~~~e~~~~~p-----  161 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDP-IATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDH----PDLPKIEERIGRP-----  161 (348)
T ss_pred             CEEEECccccCchhhhhCH-HHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCC----CCCCCCCCCCCCC-----
Confidence            999999997554322 344 67899999999999999999999999999997655433    2455667665444     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccc-c--CCcccccccHHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYES-L--ENKLRMIVDVRD  230 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D  230 (319)
                       .++|+.+|..+|.+++.+.++++++++++||+++|||+..+.   ..++..++.++..+.++. .  |++.++|+|++|
T Consensus       162 -~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D  240 (348)
T PRK15181        162 -LSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240 (348)
T ss_pred             -CChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHH
Confidence             678999999999999999888899999999999999986543   135677777888777655 3  457899999999


Q ss_pred             HHHHHHHhhccCC---CCceEEEe-cccCCHHHHHHHHHHhCCCCCC---------CCCCCCCCCceeechHHHHH-hCC
Q 020924          231 VAEALLLAYEKAE---AEGRYICT-AHMIRARDLVDKLKSLYPNYNY---------PKSFTEKEDEVMLTSEKLQK-LGW  296 (319)
Q Consensus       231 ~a~~~~~~~~~~~---~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~---------~~~~~~~~~~~~~d~~k~~~-lg~  296 (319)
                      +|++++.++....   .+++||++ +..+|++|+++.+.+.++....         ............+|++|+++ |||
T Consensus       241 ~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw  320 (348)
T PRK15181        241 VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSY  320 (348)
T ss_pred             HHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCC
Confidence            9999998775432   34689876 5899999999999998862211         11112223457899999998 999


Q ss_pred             ccc-cHHHHHHHHHHHHHHcC
Q 020924          297 SYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       297 ~~~-~~~~~l~~~~~~~~~~~  316 (319)
                      .|+ +++|+|+++++|++.+.
T Consensus       321 ~P~~sl~egl~~~~~w~~~~~  341 (348)
T PRK15181        321 EPEFDIKEGLKQTLKWYIDKH  341 (348)
T ss_pred             CCCCCHHHHHHHHHHHHHHhc
Confidence            999 99999999999998764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.8e-48  Score=338.95  Aligned_cols=313  Identities=44%  Similarity=0.707  Sum_probs=244.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh-HHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK-NARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      ++|+|||||||||||++++++|+++|++|++++|+..... ...+.......++++++.+|++|.+.+..+++++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            4689999999999999999999999999999999765321 111111111124789999999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEecccccc-ccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      +|+.... ...++...++++|+.++.+++++|++. ++++||++||.+++ |+........+++|+.+..|..+....++
T Consensus        83 ~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~  161 (322)
T PLN02662         83 TASPFYH-DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLW  161 (322)
T ss_pred             eCCcccC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccch
Confidence            9987543 223442378899999999999999987 88999999997643 43211112346888877665433333468


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhc
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      |+.+|..+|.+++.+.++++++++++||+++|||............+.++..+.. ..+++.++|||++|+|++++.+++
T Consensus       162 Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        162 YVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHHhc
Confidence            9999999999999998888999999999999999865433344445555555543 345678999999999999999999


Q ss_pred             cCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCC---CCCceeechHHHHHhCCccccHHHHHHHHHHHHHHcCC
Q 020924          241 KAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE---KEDEVMLTSEKLQKLGWSYRSLEETLVDSVESYKKVGI  317 (319)
Q Consensus       241 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~---~~~~~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~~~~  317 (319)
                      .+...+.|++++..+|++|+++.+.+.+|..+++.....   ......+|++|+++|||++++++++|+++++||++++.
T Consensus       241 ~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~~~~  320 (322)
T PLN02662        241 IPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEKGF  320 (322)
T ss_pred             CcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHHhCCccccHHHHHHHHHHHHHHcCC
Confidence            876667888888899999999999999886555543222   23457799999999999988999999999999999987


Q ss_pred             C
Q 020924          318 L  318 (319)
Q Consensus       318 ~  318 (319)
                      +
T Consensus       321 ~  321 (322)
T PLN02662        321 L  321 (322)
T ss_pred             C
Confidence            6

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-47  Score=335.93  Aligned_cols=316  Identities=39%  Similarity=0.612  Sum_probs=246.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH-HHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |.-.+|+||||||+||||++++++|+++|++|+++.|+...... ..+........+++++.+|++|.+.+.++++++|+
T Consensus         1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   80 (325)
T PLN02989          1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCET   80 (325)
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCE
Confidence            55567899999999999999999999999999999887653211 11111111124688999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCC-CCCCcccCCCCCCCccccccC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPR-WPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~-~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |||+||........+++...+++|+.++.+++++|.+. ++++||++||.+++++... .....+++|+++..|.....+
T Consensus        81 vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~  160 (325)
T PLN02989         81 VFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEER  160 (325)
T ss_pred             EEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccc
Confidence            99999965433223344678899999999999999885 5789999999877765321 112457899988776433334


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  237 (319)
                      .++|+.||.++|.+++.++++++++++++||+++|||+..........++.++..++... +.+.++|+|++|+|++++.
T Consensus       161 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~~~  239 (325)
T PLN02989        161 KQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAHVK  239 (325)
T ss_pred             ccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHHHH
Confidence            578999999999999999888899999999999999987654334455666666665432 3456899999999999999


Q ss_pred             hhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCCC----CCceeechHHHHHhCCccc-cHHHHHHHHHHHH
Q 020924          238 AYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEK----EDEVMLTSEKLQKLGWSYR-SLEETLVDSVESY  312 (319)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~----~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~  312 (319)
                      +++++...++||+++..+|++|+++.+.+.+|....+....+.    ......|++|+++|||.|. +++++|+++++|+
T Consensus       240 ~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~  319 (325)
T PLN02989        240 ALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSL  319 (325)
T ss_pred             HhcCcccCceEEEecCCCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence            9987765678998888999999999999999854333211111    1356889999988999999 9999999999999


Q ss_pred             HHcCC
Q 020924          313 KKVGI  317 (319)
Q Consensus       313 ~~~~~  317 (319)
                      ++.+.
T Consensus       320 ~~~~~  324 (325)
T PLN02989        320 KEKCL  324 (325)
T ss_pred             HHhCC
Confidence            98764

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.4e-46  Score=331.53  Aligned_cols=315  Identities=37%  Similarity=0.600  Sum_probs=236.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH-HHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +++|+|||||||||||++++++|+++|++|+++.|+...... ..+..+.. .++++++.+|++|.+.+..+++++|+||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            567899999999999999999999999999999987653211 11111111 1358899999999999999999999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCcccCCCCCCCcc---ccccC
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE---YCRTT  157 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~---~~~~~  157 (319)
                      |+|+.... ...++...++++|+.++.++++++++. ++++||++||.++|+..+......+++|+.+....   .+..|
T Consensus        86 h~A~~~~~-~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         86 HVATPVNF-ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             EeCCCCcc-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            99986432 122343456799999999999999887 58999999998776643211123456666432110   11234


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cC-------CcccccccHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LE-------NKLRMIVDVR  229 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~i~v~  229 (319)
                      .++|+.||.++|.+++.++++++++++++||+++|||+..........++.+...+.+.. .|       +..++|+|++
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~  244 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE  244 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHH
Confidence            678999999999999999988899999999999999986433222222344555555433 22       1247999999


Q ss_pred             HHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCC--CCCceeechHHHHHhCCccc-cHHHHHH
Q 020924          230 DVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE--KEDEVMLTSEKLQKLGWSYR-SLEETLV  306 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~--~~~~~~~d~~k~~~lg~~~~-~~~~~l~  306 (319)
                      |+|++++.+++.....+.|++++...|+.|+++.+.+.++...++....+  ......+|++|++++||+|+ +++++|+
T Consensus       245 D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~G~~p~~~l~~gi~  324 (338)
T PLN00198        245 DVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISSEKLISEGFSFEYGIEEIYD  324 (338)
T ss_pred             HHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCccccccCCCCccccChHHHHhCCceecCcHHHHHH
Confidence            99999999998866566888888889999999999999875433332211  12346789999998999999 9999999


Q ss_pred             HHHHHHHHcCCCC
Q 020924          307 DSVESYKKVGILN  319 (319)
Q Consensus       307 ~~~~~~~~~~~~~  319 (319)
                      ++++||++++.++
T Consensus       325 ~~~~~~~~~~~~~  337 (338)
T PLN00198        325 QTVEYFKAKGLLK  337 (338)
T ss_pred             HHHHHHHHcCCCC
Confidence            9999999999875

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=5.5e-46  Score=329.28  Aligned_cols=314  Identities=37%  Similarity=0.684  Sum_probs=234.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHH-HHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNA-RLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |.-..|+|||||||||||++++++|+++|++|++++|+....... .+........+++++.+|++|.+.+.++++++|+
T Consensus         1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~   80 (351)
T PLN02650          1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTG   80 (351)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCE
Confidence            455678999999999999999999999999999999976532111 1111111123588999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCcc---ccc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE---YCR  155 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~---~~~  155 (319)
                      |||+|+..... ..++....+++|+.++.+++++|++.+ +++|||+||.+++++...  ....++|+.+...+   .+.
T Consensus        81 ViH~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~  157 (351)
T PLN02650         81 VFHVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEH--QKPVYDEDCWSDLDFCRRKK  157 (351)
T ss_pred             EEEeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCC--CCCccCcccCCchhhhhccc
Confidence            99999865432 224434688999999999999999886 789999999766665421  11225666542211   112


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHH--HHhcCccccC-CcccccccHHHHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIK--LLKEGYESLE-NKLRMIVDVRDVA  232 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~i~v~D~a  232 (319)
                      .+.++|+.||.++|.+++.++++++++++++||+++|||+.....  ...++..  ...+.....+ .+.++|+|++|+|
T Consensus       158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva  235 (351)
T PLN02650        158 MTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSM--PPSLITALSLITGNEAHYSIIKQGQFVHLDDLC  235 (351)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCC--CccHHHHHHHhcCCccccCcCCCcceeeHHHHH
Confidence            235689999999999999999889999999999999999765321  1222221  1223222222 2458999999999


Q ss_pred             HHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCC---CCCCceeechHHHHHhCCccc-cHHHHHHHH
Q 020924          233 EALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFT---EKEDEVMLTSEKLQKLGWSYR-SLEETLVDS  308 (319)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~---~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~  308 (319)
                      ++++.+++++...+.|++++..+|+.|+++.+.+.++...++....   .......+|++|+++|||+|+ +++++|+++
T Consensus       236 ~a~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~egl~~~  315 (351)
T PLN02650        236 NAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGFTFKYSLEDMFDGA  315 (351)
T ss_pred             HHHHHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCCCCCCCHHHHHHHH
Confidence            9999999876666789888889999999999999987544443322   122445679999877999999 999999999


Q ss_pred             HHHHHHcCCCC
Q 020924          309 VESYKKVGILN  319 (319)
Q Consensus       309 ~~~~~~~~~~~  319 (319)
                      ++|+++++.+|
T Consensus       316 i~~~~~~~~~~  326 (351)
T PLN02650        316 IETCREKGLIP  326 (351)
T ss_pred             HHHHHHcCCCC
Confidence            99999988764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=5.7e-45  Score=323.56  Aligned_cols=302  Identities=17%  Similarity=0.204  Sum_probs=230.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC-ChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP-SDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   81 (319)
                      ||+|||||||||||++++++|+++|++++++.++. .......+.... ...+++++.+|++|.+++.+++++  +|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence            46899999999999999999999998865544432 211111121111 123578889999999999999984  89999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC---------CCCEEEEeccccccccCCCCCCCcccCCCCCCCcc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA---------KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE  152 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~---------~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  152 (319)
                      |+||........+.+..++++|+.++.+++++|++.         +++++|++||.++|+....  ...+++|+.+..| 
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~E~~~~~p-  156 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS--TDDFFTETTPYAP-  156 (355)
T ss_pred             ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC--CCCCcCCCCCCCC-
Confidence            999976543222334789999999999999999863         5679999999665432211  2456888876554 


Q ss_pred             ccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHH
Q 020924          153 YCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVR  229 (319)
Q Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~  229 (319)
                           .+.|+.||.++|.+++.++++++++++++||+++|||+.... ..+..++.+...+.++.   .|++.++|+|++
T Consensus       157 -----~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  230 (355)
T PRK10217        157 -----SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVE  230 (355)
T ss_pred             -----CChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence                 678999999999999999888899999999999999986432 35556667777776543   355899999999


Q ss_pred             HHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCC--CC-------------CCCCCCCCceeechHHHHH
Q 020924          230 DVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYN--YP-------------KSFTEKEDEVMLTSEKLQK  293 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~--~~-------------~~~~~~~~~~~~d~~k~~~  293 (319)
                      |+|+++..+++....+++||++ +..+|++|+++.+.+.++...  .+             ...+...+...+|++|+++
T Consensus       231 D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  310 (355)
T PRK10217        231 DHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIAR  310 (355)
T ss_pred             HHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHH
Confidence            9999999999876556689886 588999999999999886311  00             0111223457889999988


Q ss_pred             -hCCccc-cHHHHHHHHHHHHHHcC
Q 020924          294 -LGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       294 -lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                       |||+|. +++|+|+++++|++.+.
T Consensus       311 ~lg~~p~~~l~e~l~~~~~~~~~~~  335 (355)
T PRK10217        311 ELGWLPQETFESGMRKTVQWYLANE  335 (355)
T ss_pred             hcCCCCcCcHHHHHHHHHHHHHhCH
Confidence             999998 99999999999998764

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=6.8e-45  Score=326.14  Aligned_cols=303  Identities=19%  Similarity=0.269  Sum_probs=224.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhh--ccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELE--KASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +.|+|||||||||||++|+++|+++ |++|++++|+....  ..+....  ....+++++.+|++|.+.+.++++++|+|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence            4578999999999999999999998 59999999875432  1111110  11246899999999999999999999999


Q ss_pred             EEecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcc-------
Q 020924           81 FHIACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE-------  152 (319)
Q Consensus        81 i~~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~-------  152 (319)
                      ||+|+...... ..++ ...+..|+.++.+++++|++.+ ++|||+||.++|+...    ..+++|+.|..+.       
T Consensus        91 iHlAa~~~~~~~~~~~-~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~----~~~~~e~~p~~~~~~~~~~~  164 (386)
T PLN02427         91 INLAAICTPADYNTRP-LDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI----GSFLPKDHPLRQDPAFYVLK  164 (386)
T ss_pred             EEcccccChhhhhhCh-HHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCc----CCCCCccccccccccccccc
Confidence            99999754322 2233 4567889999999999999887 7999999976554321    1223333322110       


Q ss_pred             ---------ccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC----------CCccHHHHHHHHhc
Q 020924          153 ---------YCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK----------VNTSSLVLIKLLKE  213 (319)
Q Consensus       153 ---------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~----------~~~~~~~~~~~~~~  213 (319)
                               ....+.+.|+.+|.++|.++..++++++++++++||+++|||+....          ...+..++.++..+
T Consensus       165 e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (386)
T PLN02427        165 EDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR  244 (386)
T ss_pred             ccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcC
Confidence                     01123567999999999999998888899999999999999975311          12333445566667


Q ss_pred             Cccc-c--CCcccccccHHHHHHHHHHhhccCC--CCceEEEec--ccCCHHHHHHHHHHhCCCCCC-C----------C
Q 020924          214 GYES-L--ENKLRMIVDVRDVAEALLLAYEKAE--AEGRYICTA--HMIRARDLVDKLKSLYPNYNY-P----------K  275 (319)
Q Consensus       214 ~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~--~~~s~~e~~~~~~~~~g~~~~-~----------~  275 (319)
                      .+.. .  |++.++|||++|+|++++.+++++.  .+++||+++  ..+|+.|+++.+.+.+|.... +          .
T Consensus       245 ~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~  324 (386)
T PLN02427        245 EPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSS  324 (386)
T ss_pred             CCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCc
Confidence            6654 3  4578999999999999999998763  244898875  489999999999999874211 0          0


Q ss_pred             CC-----CCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHHH
Q 020924          276 SF-----TEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYKK  314 (319)
Q Consensus       276 ~~-----~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~  314 (319)
                      ..     .........|++|+++ |||+|+ +++++|+++++|++.
T Consensus       325 ~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~  370 (386)
T PLN02427        325 KEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK  370 (386)
T ss_pred             ccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence            00     0122446779999998 999999 999999999999875

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.3e-44  Score=320.20  Aligned_cols=302  Identities=24%  Similarity=0.219  Sum_probs=233.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   80 (319)
                      +++|+|||||||||||++++++|+++|++|++++|+...... ....+. ...+++++.+|++|.+++.+++++  +|+|
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   79 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPN-LFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFKPEIV   79 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchh-HHHHHh-hcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence            357899999999999999999999999999999987654221 111111 123577889999999999999884  6999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      ||+|+........+.+...+++|+.++.++++++++.+ +++||++||...| +.+.  ...+++|+++..|      .+
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vy-g~~~--~~~~~~e~~~~~p------~~  150 (349)
T TIGR02622        80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCY-RNDE--WVWGYRETDPLGG------HD  150 (349)
T ss_pred             EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhh-CCCC--CCCCCccCCCCCC------CC
Confidence            99999654432223337789999999999999998876 7899999996654 3321  1245677766544      67


Q ss_pred             hHHhhHHHHHHHHHHhhhhC-------CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHH
Q 020924          160 WYCLSKTEAESEALEFGKKT-------GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRD  230 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D  230 (319)
                      +|+.+|.++|.+++.+++++       +++++++||+++|||+.......++.++.....+.+..  .|++.|+|+|++|
T Consensus       151 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D  230 (349)
T TIGR02622       151 PYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLE  230 (349)
T ss_pred             cchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHH
Confidence            89999999999999887654       89999999999999975333345677778887777655  3568999999999


Q ss_pred             HHHHHHHhhccC-----CCCceEEEec---ccCCHHHHHHHHHHhCCCCCCCC------CCCCCCCceeechHHHHH-hC
Q 020924          231 VAEALLLAYEKA-----EAEGRYICTA---HMIRARDLVDKLKSLYPNYNYPK------SFTEKEDEVMLTSEKLQK-LG  295 (319)
Q Consensus       231 ~a~~~~~~~~~~-----~~~~~~~~~~---~~~s~~e~~~~~~~~~g~~~~~~------~~~~~~~~~~~d~~k~~~-lg  295 (319)
                      +|++++.+++..     ..++.||++.   .++++.|+++.+.+.++..++..      ..+.......+|++|+++ ||
T Consensus       231 ~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  310 (349)
T TIGR02622       231 PLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLG  310 (349)
T ss_pred             HHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhC
Confidence            999999887642     2246898873   69999999999998876432221      112223457889999998 99


Q ss_pred             Cccc-cHHHHHHHHHHHHHHc
Q 020924          296 WSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       296 ~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |+|+ +++++|+++++|+++.
T Consensus       311 w~p~~~l~~gi~~~i~w~~~~  331 (349)
T TIGR02622       311 WHPRWGLEEAVSRTVDWYKAW  331 (349)
T ss_pred             CCCCCCHHHHHHHHHHHHHHH
Confidence            9999 9999999999999864

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=9.9e-44  Score=315.02  Aligned_cols=314  Identities=33%  Similarity=0.575  Sum_probs=226.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+|+|||||||||||++++++|+++|++|++++|+..... .....+. ...+++++.+|++|.+.+.++++++|+|||+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSL-HLLSKWK-EGDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHhhc-cCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            4689999999999999999999999999999998754321 1122221 1346889999999999999999999999999


Q ss_pred             cccCCCCC--CCCccch-----hhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCC-CCCcccCCCCCCCcc--
Q 020924           84 ACPAPSTT--VPNPQME-----LLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRW-PKGQIMDETCWSDKE--  152 (319)
Q Consensus        84 a~~~~~~~--~~~~~~~-----~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~-~~~~~~~E~~~~~~~--  152 (319)
                      |+......  ....+..     .++.|+.++.+++++|++.+ +++||++||.++|+..+.. ....+++|+.+...+  
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            99764431  1112233     34556799999999999874 7899999997766533210 012456776432211  


Q ss_pred             -ccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc----CC----ccc
Q 020924          153 -YCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL----EN----KLR  223 (319)
Q Consensus       153 -~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~  223 (319)
                       .+..+.++|+.||.++|.+++.++++++++++++||+++|||+...........+.....+.....    +.    ..+
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence             011235679999999999999999888999999999999999765432111111222223332111    11    246


Q ss_pred             ccccHHHHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCC-CC--CCCceeechHHHHHhCCccc-
Q 020924          224 MIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSF-TE--KEDEVMLTSEKLQKLGWSYR-  299 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~-~~--~~~~~~~d~~k~~~lg~~~~-  299 (319)
                      +|||++|+|++++.+++.+...+.|++++..++++|+++.+.+.++........ ..  ......+|++|+++|||+|+ 
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lGw~p~~  326 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEYKY  326 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHHHcCCCccC
Confidence            999999999999999987655568888889999999999999998743221111 11  11124568999988999999 


Q ss_pred             cHHHHHHHHHHHHHHcCCCC
Q 020924          300 SLEETLVDSVESYKKVGILN  319 (319)
Q Consensus       300 ~~~~~l~~~~~~~~~~~~~~  319 (319)
                      +++++|+++++|+++.+.+|
T Consensus       327 ~l~~~i~~~~~~~~~~~~~~  346 (353)
T PLN02896        327 GIEEIIDQTIDCCVDHGFLP  346 (353)
T ss_pred             CHHHHHHHHHHHHHHCCCCC
Confidence            99999999999999998864

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.1e-44  Score=317.18  Aligned_cols=298  Identities=18%  Similarity=0.172  Sum_probs=227.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-----cCCCeEEEEccCCChhhHHHHhcC--cc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-----ASENLKLFKADLLDYDSVKSAIVG--CN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~--~d   78 (319)
                      |+|||||||||||++++++|+++|++|++++|+........+..+..     ...+++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999764211111111110     023688999999999999999984  69


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC---EEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK---RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~---~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      +|||+|+........+.....+++|+.++.+++++|++.+++   +|||+||.++|+ ..   ...+++|+.+..|    
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg-~~---~~~~~~E~~~~~p----  152 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYG-KV---QEIPQNETTPFYP----  152 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhC-CC---CCCCCCCCCCCCC----
Confidence            999999976543222223677789999999999999998764   899999976554 32   2456788876654    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC--CCccHHHHHHHHhcCcc--c--cCCcccccccHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK--VNTSSLVLIKLLKEGYE--S--LENKLRMIVDVR  229 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~~i~v~  229 (319)
                        .++|+.||.++|.+++.++++++++++..|+.++|||+....  ...+..++.+...+.+.  .  .|++.++|+|++
T Consensus       153 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~  230 (343)
T TIGR01472       153 --RSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK  230 (343)
T ss_pred             --CChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence              778999999999999999888899999999999999874322  12334455556566532  2  345899999999


Q ss_pred             HHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC-CC---------------------CC--CCCCCCCce
Q 020924          230 DVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY-NY---------------------PK--SFTEKEDEV  284 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~-~~---------------------~~--~~~~~~~~~  284 (319)
                      |+|++++.+++++. .+.||++ ++.+|++|+++.+.+.+|.. .+                     ..  ..+......
T Consensus       231 D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (343)
T TIGR01472       231 DYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLL  309 (343)
T ss_pred             HHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchh
Confidence            99999999998754 4688776 69999999999999999831 11                     00  112222346


Q ss_pred             eechHHHHH-hCCccc-cHHHHHHHHHHHHHH
Q 020924          285 MLTSEKLQK-LGWSYR-SLEETLVDSVESYKK  314 (319)
Q Consensus       285 ~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~  314 (319)
                      ..|++|+++ |||+|+ +++|+|+++++|+++
T Consensus       310 ~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       310 LGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             cCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            779999998 999999 999999999999985

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=4.9e-44  Score=316.38  Aligned_cols=300  Identities=19%  Similarity=0.300  Sum_probs=228.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC-ChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL-DYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vi~   82 (319)
                      ||+|||||||||||++|+++|+++ |++|++++|+....  ..+.    ..++++++.+|++ +.+.+.++++++|+|||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~--~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL--GDLV----NHPRMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH--HHhc----cCCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            468999999999999999999986 69999999865321  1111    1246899999998 67788888899999999


Q ss_pred             ecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCC-CCccccccCCch
Q 020924           83 IACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW-SDKEYCRTTNNW  160 (319)
Q Consensus        83 ~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~  160 (319)
                      +|+...... ..+| ...+++|+.++.+++++|++.+ +++||+||..+|+..    ...+++|+.+ ....+...|.++
T Consensus        75 ~aa~~~~~~~~~~p-~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~----~~~~~~ee~~~~~~~~~~~p~~~  148 (347)
T PRK11908         75 LVAIATPATYVKQP-LRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMC----PDEEFDPEASPLVYGPINKPRWI  148 (347)
T ss_pred             CcccCChHHhhcCc-HHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccC----CCcCcCccccccccCcCCCccch
Confidence            999754432 2344 7788999999999999999888 699999997655432    2345666543 211111134678


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-------CCccHHHHHHHHhcCccc---cCCcccccccHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-------VNTSSLVLIKLLKEGYES---LENKLRMIVDVRD  230 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D  230 (319)
                      |+.+|.++|.+++.++++++++++++||+++|||+....       ...+..++.++..+.+..   .|++.|+|||++|
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D  228 (347)
T PRK11908        149 YACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDD  228 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHH
Confidence            999999999999999888899999999999999975421       234566777777777654   3568999999999


Q ss_pred             HHHHHHHhhccCC---CCceEEEec--ccCCHHHHHHHHHHhCCCCC-C-------CCC-CC-------C--CCCceeec
Q 020924          231 VAEALLLAYEKAE---AEGRYICTA--HMIRARDLVDKLKSLYPNYN-Y-------PKS-FT-------E--KEDEVMLT  287 (319)
Q Consensus       231 ~a~~~~~~~~~~~---~~~~~~~~~--~~~s~~e~~~~~~~~~g~~~-~-------~~~-~~-------~--~~~~~~~d  287 (319)
                      +|++++.+++++.   .+++||+++  ..+|++|+++.+.+.++..+ +       ... ..       .  .......|
T Consensus       229 ~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  308 (347)
T PRK11908        229 GIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPK  308 (347)
T ss_pred             HHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCC
Confidence            9999999998753   245898876  47999999999999887321 1       000 00       0  11245578


Q ss_pred             hHHHHH-hCCccc-cHHHHHHHHHHHHHHcC
Q 020924          288 SEKLQK-LGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       288 ~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                      ++|+++ |||+|+ +++++++++++|++++.
T Consensus       309 ~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~  339 (347)
T PRK11908        309 IDNTMQELGWAPKTTMDDALRRIFEAYRGHV  339 (347)
T ss_pred             hHHHHHHcCCCCCCcHHHHHHHHHHHHHHHH
Confidence            999998 999999 99999999999998753

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=5.6e-44  Score=321.53  Aligned_cols=296  Identities=20%  Similarity=0.306  Sum_probs=227.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      .|+|||||||||||++|+++|+++|++|++++|..... ........ ...+++++.+|+.+..     +.++|+|||+|
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~-~~~~~~~~-~~~~~~~~~~Di~~~~-----~~~~D~ViHlA  192 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR-KENLVHLF-GNPRFELIRHDVVEPI-----LLEVDQIYHLA  192 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc-HhHhhhhc-cCCceEEEECcccccc-----ccCCCEEEECc
Confidence            47899999999999999999999999999999864321 11111111 1246788889987652     45799999999


Q ss_pred             ccCCCCCC-CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           85 CPAPSTTV-PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        85 ~~~~~~~~-~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      +....... .++ ..++++|+.++.+++++|++.++ ++|++||.++|+ .+   ...+.+|+.+... .|..+.+.|+.
T Consensus       193 a~~~~~~~~~~p-~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg-~~---~~~p~~E~~~~~~-~p~~p~s~Yg~  265 (436)
T PLN02166        193 CPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYG-DP---LEHPQKETYWGNV-NPIGERSCYDE  265 (436)
T ss_pred             eeccchhhccCH-HHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhC-CC---CCCCCCccccccC-CCCCCCCchHH
Confidence            97654322 344 78899999999999999999886 899999976554 32   2456777753221 12234678999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-CCccHHHHHHHHhcCccc-cC--CcccccccHHHHHHHHHHhh
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYES-LE--NKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~  239 (319)
                      +|..+|++++.+++.++++++++||+++||++.... ...+..++.++..+.++. .|  ++.++|+|++|+|+++..++
T Consensus       266 SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~  345 (436)
T PLN02166        266 GKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM  345 (436)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence            999999999999888899999999999999975422 245567778888877765 44  47899999999999999999


Q ss_pred             ccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC---CCCCCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHH
Q 020924          240 EKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY---NYPKSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYK  313 (319)
Q Consensus       240 ~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~---~~~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~  313 (319)
                      +.. ..++||++ +..+|++|+++.+.+.+|..   .+............+|++|+++ |||+|+ +++++++++++|++
T Consensus       346 ~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~  424 (436)
T PLN02166        346 EGE-HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFR  424 (436)
T ss_pred             hcC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence            764 35689876 58999999999999999732   1112222333557889999999 999998 99999999999998


Q ss_pred             Hc
Q 020924          314 KV  315 (319)
Q Consensus       314 ~~  315 (319)
                      ++
T Consensus       425 ~~  426 (436)
T PLN02166        425 NR  426 (436)
T ss_pred             HH
Confidence            75

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=9.3e-44  Score=321.50  Aligned_cols=309  Identities=17%  Similarity=0.190  Sum_probs=224.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh-h--------------HHHHHhhhc-cCCCeEEEEccCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-K--------------NARLYELEK-ASENLKLFKADLLD   66 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~--------------~~~~~~~~~-~~~~~~~~~~Dl~~   66 (319)
                      .++|+|||||||||||++|+++|+++|++|++++|..... .              ...+..... ...+++++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            4678999999999999999999999999999987532110 0              011111110 12368899999999


Q ss_pred             hhhHHHHhc--CcceEEEecccCCCCC-CCCc--cchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCC-C
Q 020924           67 YDSVKSAIV--GCNGVFHIACPAPSTT-VPNP--QMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWP-K  139 (319)
Q Consensus        67 ~~~~~~~~~--~~d~vi~~a~~~~~~~-~~~~--~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~-~  139 (319)
                      .+.+..+++  ++|+|||+|+...... ..++  +...+++|+.|+.+++++|++.+++ +||++||..+|+ .+..+ .
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG-~~~~~~~  203 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYG-TPNIDIE  203 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecC-CCCCCCc
Confidence            999999998  4899999997644321 1122  2456789999999999999999985 899999976554 32111 0


Q ss_pred             CcccC------CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC--------------
Q 020924          140 GQIMD------ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK--------------  199 (319)
Q Consensus       140 ~~~~~------E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~--------------  199 (319)
                      +.+++      |+++.   .+..|.++|+.||.++|.+++.+++++|++++++||+++|||++...              
T Consensus       204 E~~i~~~~~~~e~~~~---~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~  280 (442)
T PLN02572        204 EGYITITHNGRTDTLP---YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDG  280 (442)
T ss_pred             cccccccccccccccc---CCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCccc
Confidence            11121      12211   13345788999999999999999998999999999999999986431              


Q ss_pred             --CCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhhccCCCCc---eEEEecccCCHHHHHHHHHHh---C
Q 020924          200 --VNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAYEKAEAEG---RYICTAHMIRARDLVDKLKSL---Y  268 (319)
Q Consensus       200 --~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~~~~~s~~e~~~~~~~~---~  268 (319)
                        ...+..++.++..++++.   .|++.|+|+||+|+|++++.++++....+   +||+++..+|++|+++.+.+.   .
T Consensus       281 ~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~~  360 (442)
T PLN02572        281 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEKL  360 (442)
T ss_pred             chhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHhh
Confidence              123445566777777654   34688999999999999999998653323   688877889999999999998   6


Q ss_pred             CC-CCCCCC----CCCCCCceeechHHHHHhCCccc----cHHHHHHHHHHHHHHc
Q 020924          269 PN-YNYPKS----FTEKEDEVMLTSEKLQKLGWSYR----SLEETLVDSVESYKKV  315 (319)
Q Consensus       269 g~-~~~~~~----~~~~~~~~~~d~~k~~~lg~~~~----~~~~~l~~~~~~~~~~  315 (319)
                      |. ..+...    ..........|.+|+++|||+|+    ++++++.+++.||+++
T Consensus       361 g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        361 GLDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             CCCCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            62 121111    11112356789999988999997    7889999999999864

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.2e-43  Score=319.87  Aligned_cols=298  Identities=19%  Similarity=0.259  Sum_probs=226.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++|+|||||||||||++|+++|+++|++|++++|.............  ...+++++.+|+.+..     +.++|+|||+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l~~~D~ViHl  190 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----LLEVDQIYHL  190 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----hcCCCEEEEe
Confidence            56899999999999999999999999999999875432111111111  1246888899987653     4579999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+..........+...+++|+.++.+|+++|++.++ ++||+||..+|+..    ...+.+|+.+...+ |..+.+.|+.
T Consensus       191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~----~~~p~~E~~~~~~~-P~~~~s~Y~~  264 (442)
T PLN02206        191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP----LQHPQVETYWGNVN-PIGVRSCYDE  264 (442)
T ss_pred             eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCC----CCCCCCccccccCC-CCCccchHHH
Confidence            997654322223378899999999999999999986 99999997655432    24466777543221 2234678999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-CCccHHHHHHHHhcCccc-c--CCcccccccHHHHHHHHHHhh
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYES-L--ENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      +|.++|.++..+.++++++++++||+++||++.... ...+..++.++..+.++. .  |++.++|+|++|+|++++.++
T Consensus       265 SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        265 GKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            999999999999888899999999999999975422 234556777777777655 3  447899999999999999998


Q ss_pred             ccCCCCceEEEe-cccCCHHHHHHHHHHhCCC-CCC--CCCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHH
Q 020924          240 EKAEAEGRYICT-AHMIRARDLVDKLKSLYPN-YNY--PKSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYK  313 (319)
Q Consensus       240 ~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~-~~~--~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~  313 (319)
                      +.. ..+.||++ +..+|++|+++.+.+.++. ..+  ............+|++|+++ |||+|+ +++|+|+++++|++
T Consensus       345 e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~  423 (442)
T PLN02206        345 EGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFR  423 (442)
T ss_pred             hcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence            765 45689776 5899999999999999862 111  11122233557899999998 999999 99999999999998


Q ss_pred             Hc
Q 020924          314 KV  315 (319)
Q Consensus       314 ~~  315 (319)
                      ..
T Consensus       424 ~~  425 (442)
T PLN02206        424 QR  425 (442)
T ss_pred             Hh
Confidence            64

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=1.3e-43  Score=336.33  Aligned_cols=303  Identities=19%  Similarity=0.288  Sum_probs=233.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh-HHHHhcCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS-VKSAIVGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~vi   81 (319)
                      ++|+|||||||||||++|+++|+++ ||+|++++|......  ..   . ...+++++.+|++|... +.++++++|+||
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~--~~---~-~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi  387 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAIS--RF---L-GHPRFHFVEGDISIHSEWIEYHIKKCDVVL  387 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhh--hh---c-CCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence            4689999999999999999999985 799999998764211  11   1 12468999999998665 577888999999


Q ss_pred             EecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccc-cCCc
Q 020924           82 HIACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR-TTNN  159 (319)
Q Consensus        82 ~~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~  159 (319)
                      |+||...... ..++ ...+++|+.++.+++++|++.+ ++|||+||.++|+ ..   ...+++|+++..+..+. .+.+
T Consensus       388 HlAa~~~~~~~~~~~-~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg-~~---~~~~~~E~~~~~~~~p~~~p~s  461 (660)
T PRK08125        388 PLVAIATPIEYTRNP-LRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYG-MC---TDKYFDEDTSNLIVGPINKQRW  461 (660)
T ss_pred             ECccccCchhhccCH-HHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcC-CC---CCCCcCccccccccCCCCCCcc
Confidence            9999765432 2333 6788999999999999999988 7999999976554 32   24567888754221121 2457


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-------CCccHHHHHHHHhcCccc---cCCcccccccHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-------VNTSSLVLIKLLKEGYES---LENKLRMIVDVR  229 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~  229 (319)
                      .|+.||.++|.+++.++++++++++++||+++|||+....       ...+..++.++..+.+..   .|++.|+|+|++
T Consensus       462 ~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~  541 (660)
T PRK08125        462 IYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIR  541 (660)
T ss_pred             chHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHH
Confidence            8999999999999999888899999999999999975421       134566777777777654   345899999999


Q ss_pred             HHHHHHHHhhccCC---CCceEEEec-c-cCCHHHHHHHHHHhCCCCC----CCCCC--------------CCCCCceee
Q 020924          230 DVAEALLLAYEKAE---AEGRYICTA-H-MIRARDLVDKLKSLYPNYN----YPKSF--------------TEKEDEVML  286 (319)
Q Consensus       230 D~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~~~~~~g~~~----~~~~~--------------~~~~~~~~~  286 (319)
                      |+|++++.++++..   .+++||+++ + .+|++|+++.+.+.+|..+    ++...              ........+
T Consensus       542 Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  621 (660)
T PRK08125        542 DGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKP  621 (660)
T ss_pred             HHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCC
Confidence            99999999998753   234798875 3 6999999999999987321    11110              001133567


Q ss_pred             chHHHHH-hCCccc-cHHHHHHHHHHHHHHcCCC
Q 020924          287 TSEKLQK-LGWSYR-SLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       287 d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~~  318 (319)
                      |++|+++ |||+|+ +++++|+++++|++++..+
T Consensus       622 d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~  655 (660)
T PRK08125        622 SIRNARRLLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_pred             ChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcccc
Confidence            9999998 999999 9999999999999998765

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.5e-43  Score=310.12  Aligned_cols=301  Identities=16%  Similarity=0.137  Sum_probs=230.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh----ccCCCeEEEEccCCChhhHHHHhcC-
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE----KASENLKLFKADLLDYDSVKSAIVG-   76 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~-   76 (319)
                      +.++|+|||||||||||++++++|+++|++|++++|+........+..+.    ..+.+++++.+|++|.+.+.++++. 
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            35678999999999999999999999999999999875421111122111    1124588999999999999998874 


Q ss_pred             -cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-----EEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           77 -CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-----RVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        77 -~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-----~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                       +|+|||+|+..........+...+++|+.++.+++++|++.+++     +||++||.++| +..    ..+++|+++..
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vy-g~~----~~~~~E~~~~~  157 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMY-GST----PPPQSETTPFH  157 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHh-CCC----CCCCCCCCCCC
Confidence             79999999975543222233677899999999999999998875     89999996654 432    23678887665


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc----cCCcccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES----LENKLRM  224 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~  224 (319)
                      |      .++|+.||.++|.+++.+++++++.++..|+.++|||+.....  ..+..++.++..+.+..    .|++.|+
T Consensus       158 p------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  231 (340)
T PLN02653        158 P------RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRD  231 (340)
T ss_pred             C------CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceec
Confidence            4      7889999999999999999888999999999999998644321  12233344555665332    3458899


Q ss_pred             cccHHHHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC---C--CCC--CCCCCCCceeechHHHHH-hC
Q 020924          225 IVDVRDVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY---N--YPK--SFTEKEDEVMLTSEKLQK-LG  295 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~---~--~~~--~~~~~~~~~~~d~~k~~~-lg  295 (319)
                      |+|++|+|++++.++++.. .+.||++ ++++|++|+++.+.+..|..   .  +..  ..+.......+|++|+++ ||
T Consensus       232 ~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  310 (340)
T PLN02653        232 WGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLG  310 (340)
T ss_pred             ceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhC
Confidence            9999999999999998754 4678765 68999999999999999731   1  111  112233456789999998 99


Q ss_pred             Cccc-cHHHHHHHHHHHHHH
Q 020924          296 WSYR-SLEETLVDSVESYKK  314 (319)
Q Consensus       296 ~~~~-~~~~~l~~~~~~~~~  314 (319)
                      |+|+ +++++|+++++||+.
T Consensus       311 w~p~~~l~~gi~~~~~~~~~  330 (340)
T PLN02653        311 WKPKVGFEQLVKMMVDEDLE  330 (340)
T ss_pred             CCCCCCHHHHHHHHHHHHHH
Confidence            9999 999999999999885

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.3e-42  Score=308.52  Aligned_cols=299  Identities=17%  Similarity=0.160  Sum_probs=225.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++|+|||||||||||++++++|+++||+|++++|......    .   ......+++.+|++|.+.+..+++++|+|||+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~----~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM----S---EDMFCHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc----c---cccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            4689999999999999999999999999999998643210    0   00113577889999999999988999999999


Q ss_pred             cccCCCCC--CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           84 ACPAPSTT--VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        84 a~~~~~~~--~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      |+......  ..++ ...++.|+.++.+++++|++.++++|||+||.++|+.........++.|+.+.    +..|.++|
T Consensus        93 Aa~~~~~~~~~~~~-~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~----p~~p~s~Y  167 (370)
T PLN02695         93 AADMGGMGFIQSNH-SVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAY  167 (370)
T ss_pred             ccccCCccccccCc-hhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCC----CCCCCCHH
Confidence            98654221  1223 45678999999999999999999999999997655432211112245565421    22347889


Q ss_pred             HhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhc-Cccc---cCCcccccccHHHHHHH
Q 020924          162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKE-GYES---LENKLRMIVDVRDVAEA  234 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~-~~~~---~~~~~~~~i~v~D~a~~  234 (319)
                      +.+|.++|.+++.++++++++++++||+++|||+....   ...+..++.++... .++.   .|++.++|+|++|++++
T Consensus       168 g~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~a  247 (370)
T PLN02695        168 GLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEG  247 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHH
Confidence            99999999999999888899999999999999975322   12344566665543 3333   34588999999999999


Q ss_pred             HHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCC-CCCCC-CCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHH
Q 020924          235 LLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPN-YNYPK-SFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSV  309 (319)
Q Consensus       235 ~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~-~~~~~-~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~  309 (319)
                      ++.+++.. ..++||++ +..+|++|+++.+.+..|. .++.. ..+.......+|++|+++ |||+|+ +++++|++++
T Consensus       248 i~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~  326 (370)
T PLN02695        248 VLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITY  326 (370)
T ss_pred             HHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCccccccCHHHHHHhcCCCCCCCHHHHHHHHH
Confidence            99988764 35688876 4899999999999998874 11111 111222456789999998 999999 9999999999


Q ss_pred             HHHHHc
Q 020924          310 ESYKKV  315 (319)
Q Consensus       310 ~~~~~~  315 (319)
                      +|++++
T Consensus       327 ~~~~~~  332 (370)
T PLN02695        327 FWIKEQ  332 (370)
T ss_pred             HHHHHH
Confidence            999864

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.1e-42  Score=308.60  Aligned_cols=302  Identities=19%  Similarity=0.232  Sum_probs=226.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      |+|||||||||||++++++|+++|++ |+++++.........+..+. ...+++++.+|++|.+++.++++  ++|+|||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            47999999999999999999999976 55555533211112222211 12457889999999999999987  4899999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC---------CCCEEEEeccccccccCCCCCC-------CcccCCC
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA---------KVKRVIVVSSGVAVGLNPRWPK-------GQIMDET  146 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~---------~~~~iv~~SS~~~~~~~~~~~~-------~~~~~E~  146 (319)
                      +|+..........+..++++|+.++.+++++|++.         +++++|++||.++|+.... +.       ..+++|+
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~-~~~~~~~~~~~~~~E~  158 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPH-PDEVENSEELPLFTET  158 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCc-cccccccccCCCcccc
Confidence            99975433222233789999999999999999874         4679999999766543211 00       1235676


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  223 (319)
                      ++..|      .+.|+.||.++|.+++.++++++++++++||+++|||+.... ..+..++.++..+.++.   .|++.+
T Consensus       159 ~~~~p------~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (352)
T PRK10084        159 TAYAP------SSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIR  231 (352)
T ss_pred             CCCCC------CChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEE
Confidence            65544      778999999999999999888899999999999999975322 34556666666666543   356899


Q ss_pred             ccccHHHHHHHHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC---CCC--------CCCCCCCceeechHHH
Q 020924          224 MIVDVRDVAEALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN---YPK--------SFTEKEDEVMLTSEKL  291 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~---~~~--------~~~~~~~~~~~d~~k~  291 (319)
                      +|+|++|+|++++.++++...+++||+++ +..|++|+++.+++.++...   .+.        ..+.....+.+|++|+
T Consensus       232 ~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  311 (352)
T PRK10084        232 DWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKI  311 (352)
T ss_pred             eeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHH
Confidence            99999999999999998765567898874 78999999999999887421   010        0111224467899999


Q ss_pred             HH-hCCccc-cHHHHHHHHHHHHHHcC
Q 020924          292 QK-LGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       292 ~~-lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                      ++ |||+|+ +++++|+++++|++++.
T Consensus       312 ~~~lg~~p~~~l~~~l~~~~~~~~~~~  338 (352)
T PRK10084        312 SRELGWKPQETFESGIRKTVEWYLANT  338 (352)
T ss_pred             HHHcCCCCcCCHHHHHHHHHHHHHhCH
Confidence            98 999998 99999999999998754

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.4e-42  Score=308.09  Aligned_cols=306  Identities=19%  Similarity=0.193  Sum_probs=231.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh--HHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK--NARLYELEK-ASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |+|++|+|+|||||||||++++++|+++|++|++++|......  ...+..... .+.+++++.+|++|.+.+..+++  
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            8899999999999999999999999999999999987543211  111221111 12468899999999999999886  


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      ++|+|||+|+..........+...+++|+.++.+++++|++.++++||++||+.+ |+..   ...+++|+++..|    
T Consensus        81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~---~~~~~~E~~~~~~----  152 (352)
T PLN02240         81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATV-YGQP---EEVPCTEEFPLSA----  152 (352)
T ss_pred             CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHH-hCCC---CCCCCCCCCCCCC----
Confidence            6899999998654322222336789999999999999999999999999999654 4432   3567889887665    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhh-CCceEEEEecCcccCCCCCC--------CCCccHHHHHHHHhcCc--cc-------
Q 020924          156 TTNNWYCLSKTEAESEALEFGKK-TGLDVVTICPNLVLGPLLQS--------KVNTSSLVLIKLLKEGY--ES-------  217 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~--~~-------  217 (319)
                        .++|+.+|.++|.+++.++.. .+++++++|++++||+....        ....+..++.++..++.  ..       
T Consensus       153 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  230 (352)
T PLN02240        153 --TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYP  230 (352)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCC
Confidence              678999999999999988754 57899999999999974321        11122344555554432  11       


Q ss_pred             --cCCcccccccHHHHHHHHHHhhccC----CC-CceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC----CCCCCCcee
Q 020924          218 --LENKLRMIVDVRDVAEALLLAYEKA----EA-EGRYICT-AHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDEVM  285 (319)
Q Consensus       218 --~~~~~~~~i~v~D~a~~~~~~~~~~----~~-~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~----~~~~~~~~~  285 (319)
                        .|.+.++|||++|+|++++.++...    .. +++||++ ++++|++|+++.+.+.+|. +.+..    .+.......
T Consensus       231 ~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~  309 (352)
T PLN02240        231 TKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGK-KIPLKLAPRRPGDAEEVY  309 (352)
T ss_pred             CCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCC-CCCceeCCCCCCChhhhh
Confidence              2458899999999999999888642    22 3589876 6999999999999999973 22221    112223466


Q ss_pred             echHHHHH-hCCccc-cHHHHHHHHHHHHHHcCC
Q 020924          286 LTSEKLQK-LGWSYR-SLEETLVDSVESYKKVGI  317 (319)
Q Consensus       286 ~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~  317 (319)
                      .|++|+++ |||+|+ +++++|+++++|+++++.
T Consensus       310 ~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~  343 (352)
T PLN02240        310 ASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPY  343 (352)
T ss_pred             cCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence            89999998 999999 999999999999998753

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=3.6e-43  Score=282.57  Aligned_cols=299  Identities=20%  Similarity=0.261  Sum_probs=242.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+++|+||||.||||||||+.|..+||+|++++.-...-+. .++.. ..++.++.+.-|+..+     ++..+|.|+|+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~-n~~~~-~~~~~fel~~hdv~~p-----l~~evD~IyhL   98 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKE-NLEHW-IGHPNFELIRHDVVEP-----LLKEVDQIYHL   98 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchh-hcchh-ccCcceeEEEeechhH-----HHHHhhhhhhh
Confidence            45799999999999999999999999999999875443221 11111 1245677777777554     77889999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+..++......+..++.+|+.++.+++-.|.+.+ +||++.|| +.+|+.+   ...|..|+.|.+. .|..+.+.|..
T Consensus        99 Aapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aST-seVYgdp---~~hpq~e~ywg~v-npigpr~cyde  172 (350)
T KOG1429|consen   99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLAST-SEVYGDP---LVHPQVETYWGNV-NPIGPRSCYDE  172 (350)
T ss_pred             ccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeec-ccccCCc---ccCCCcccccccc-CcCCchhhhhH
Confidence            99887764333348999999999999999999998 69999999 5566665   4677788877665 34566888999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccc-cCC--cccccccHHHHHHHHHHhh
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYES-LEN--KLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~~~  239 (319)
                      .|..+|.++..|.++.|+.+.|.|++++|||...-.. ...+.++.+++++.+++ +|+  +.|+|.++.|++++++.++
T Consensus       173 gKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm  252 (350)
T KOG1429|consen  173 GKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLM  252 (350)
T ss_pred             HHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHh
Confidence            9999999999999999999999999999999765443 56677888999999888 444  9999999999999999999


Q ss_pred             ccCCCCceEEEecccCCHHHHHHHHHHhCCCCC---CCCCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHHH
Q 020924          240 EKAEAEGRYICTAHMIRARDLVDKLKSLYPNYN---YPKSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYKK  314 (319)
Q Consensus       240 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~---~~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~  314 (319)
                      +++....+.++.+..+|+.|+++++.+..+...   +....+++......|++++++ |||.|. +++|+|..++.|+++
T Consensus       253 ~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~  332 (350)
T KOG1429|consen  253 ESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE  332 (350)
T ss_pred             cCCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence            987655444445699999999999999996333   233445666789999999999 999999 999999999999986


Q ss_pred             c
Q 020924          315 V  315 (319)
Q Consensus       315 ~  315 (319)
                      .
T Consensus       333 ~  333 (350)
T KOG1429|consen  333 R  333 (350)
T ss_pred             H
Confidence            4

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.1e-42  Score=331.52  Aligned_cols=305  Identities=25%  Similarity=0.293  Sum_probs=233.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh--cCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI--VGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~   79 (319)
                      ++|+|||||||||||++++++|+++  |++|++++|.........+... ....+++++.+|++|.+.+..++  .++|+
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            5689999999999999999999987  6899999875321111111111 11247899999999998888766  57999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      |||+|+.............++++|+.++.+++++|++.+ +++|||+||..+|+... .......+|+++..|      .
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~-~~~~~~~~E~~~~~p------~  156 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD-EDADVGNHEASQLLP------T  156 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCc-cccccCccccCCCCC------C
Confidence            999999866542222236788999999999999999987 89999999976554322 111122356555443      6


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEAL  235 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~  235 (319)
                      ++|+.+|.++|.+++.+.++++++++++||+++||++.... ..+..++..+..+.++.   .|++.++|+|++|+|+++
T Consensus       157 ~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~  235 (668)
T PLN02260        157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAF  235 (668)
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHH
Confidence            77999999999999999888899999999999999976432 34556666777776554   345789999999999999


Q ss_pred             HHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC-----CCCCCCCCCCceeechHHHHHhCCccc-cHHHHHHHH
Q 020924          236 LLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN-----YPKSFTEKEDEVMLTSEKLQKLGWSYR-SLEETLVDS  308 (319)
Q Consensus       236 ~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-----~~~~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~  308 (319)
                      ..+++....+++||+++ +.+|+.|+++.+.+.+|...     .....+.....+.+|++|+++|||+|+ +++|+++++
T Consensus       236 ~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~  315 (668)
T PLN02260        236 EVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKT  315 (668)
T ss_pred             HHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHH
Confidence            99998766677998874 88999999999999998421     111122223456799999988999998 999999999


Q ss_pred             HHHHHHcCC
Q 020924          309 VESYKKVGI  317 (319)
Q Consensus       309 ~~~~~~~~~  317 (319)
                      ++||+++..
T Consensus       316 i~w~~~~~~  324 (668)
T PLN02260        316 MEWYTSNPD  324 (668)
T ss_pred             HHHHHhChh
Confidence            999998754

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.4e-43  Score=283.66  Aligned_cols=301  Identities=24%  Similarity=0.299  Sum_probs=239.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--Ccce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   79 (319)
                      +-++++||||+||||++.+..+..+  .++.+.++.-.--.....+++.. ..++.+++.+|+.+...+.-.+.  .+|.
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhccCchhh
Confidence            4478999999999999999999875  45555555322111222333332 24688999999999888887775  5899


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      |+|+|+....+.+.-+.......|+.++..|+++++.. ++++|||+||..+|++..+   +....|.+..+|      .
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~---~~~~~E~s~~nP------t  154 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDE---DAVVGEASLLNP------T  154 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccc---cccccccccCCC------C
Confidence            99999998887444344788999999999999999998 7899999999776665532   333337777766      7


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cC--CcccccccHHHHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LE--NKLRMIVDVRDVAEAL  235 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~  235 (319)
                      ++|+.+|+++|+.++.|.+.++++++++|.++||||++... +.++.|+..+..+++.. .|  -+.|+|+|++|+++++
T Consensus       155 npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~  233 (331)
T KOG0747|consen  155 NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAF  233 (331)
T ss_pred             CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHH
Confidence            88999999999999999999999999999999999987654 67778888777777766 44  4899999999999999


Q ss_pred             HHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCC----CCC---CC---CCCCCCCCceeechHHHHHhCCccc-cHHH
Q 020924          236 LLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYP----NYN---YP---KSFTEKEDEVMLTSEKLQKLGWSYR-SLEE  303 (319)
Q Consensus       236 ~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g----~~~---~~---~~~~~~~~~~~~d~~k~~~lg~~~~-~~~~  303 (319)
                      ..++++.+.+++||++ +.+.+..|+++.+.+.+.    ..+   ++   ..++.....+.++.+|+|.|||+|+ +|++
T Consensus       234 ~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~e  313 (331)
T KOG0747|consen  234 KAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEE  313 (331)
T ss_pred             HHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHH
Confidence            9999997778899766 589999999888887764    211   11   1223334569999999999999999 9999


Q ss_pred             HHHHHHHHHHHc
Q 020924          304 TLVDSVESYKKV  315 (319)
Q Consensus       304 ~l~~~~~~~~~~  315 (319)
                      |++.+++||.++
T Consensus       314 GLrktie~y~~~  325 (331)
T KOG0747|consen  314 GLRKTIEWYTKN  325 (331)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999875

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=7e-42  Score=299.24  Aligned_cols=299  Identities=20%  Similarity=0.244  Sum_probs=230.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEE
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFH   82 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~   82 (319)
                      +|+||||||+||++++++|+++|  ++|++++|.........+..+.. .++++++.+|++|.+++.+++++  +|+|||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence            58999999999999999999887  78998887432212222222211 24688899999999999999987  899999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      +|+........+....++++|+.++.+++++|.+.+.+ ++|++||..+++...   ...+++|+.+..|      .+.|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~---~~~~~~e~~~~~~------~~~Y  150 (317)
T TIGR01181        80 FAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLE---KGDAFTETTPLAP------SSPY  150 (317)
T ss_pred             cccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCC---CCCCcCCCCCCCC------CCch
Confidence            99976543222233678899999999999999987544 899999976554332   1236777776544      6779


Q ss_pred             HhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHh
Q 020924          162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLA  238 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~  238 (319)
                      +.+|..+|.+++.++++++++++++||+.+||+..... ..+..++.+...+.++.   .|++.++|+|++|+|+++..+
T Consensus       151 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~  229 (317)
T TIGR01181       151 SASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLV  229 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHH
Confidence            99999999999999888899999999999999975432 35556667777776544   345789999999999999999


Q ss_pred             hccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCC--C--CCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHH
Q 020924          239 YEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNY--P--KSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVES  311 (319)
Q Consensus       239 ~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~--~--~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~  311 (319)
                      +++...+++||++ +..++++|+++.+.+.+|..+.  .  ...+.......+|++|+++ |||+|. +|+++++++++|
T Consensus       230 ~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~  309 (317)
T TIGR01181       230 LEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQW  309 (317)
T ss_pred             HcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence            9876656689876 5789999999999999984211  1  1112222335689999987 999998 999999999999


Q ss_pred             HHHcC
Q 020924          312 YKKVG  316 (319)
Q Consensus       312 ~~~~~  316 (319)
                      |+++.
T Consensus       310 ~~~~~  314 (317)
T TIGR01181       310 YLDNE  314 (317)
T ss_pred             HHhcc
Confidence            98865

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=9e-41  Score=293.66  Aligned_cols=297  Identities=33%  Similarity=0.462  Sum_probs=230.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|+|||||||||++++++|+++|++|++++|+.....  .+.     ..+++++.+|++|.+++.++++++|+|||+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~-----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR--NLE-----GLDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc--ccc-----cCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            47999999999999999999999999999999765321  111     13688999999999999999999999999998


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ..... ..+ +...+++|+.++.++++++++.+++++|++||.++++..+   ...+.+|+++..+.   ...+.|+.+|
T Consensus        74 ~~~~~-~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~---~~~~~~e~~~~~~~---~~~~~Y~~sK  145 (328)
T TIGR03466        74 DYRLW-APD-PEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRG---DGTPADETTPSSLD---DMIGHYKRSK  145 (328)
T ss_pred             ecccC-CCC-HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCC---CCCCcCccCCCCcc---cccChHHHHH
Confidence            64321 123 3678999999999999999999999999999977665322   24577888765542   2245799999


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCCC
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE  245 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  245 (319)
                      .+.|+.+++++.+++++++++||+++||++.... ......+.....+......+...+|+|++|+|++++.++++...+
T Consensus       146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~  224 (328)
T TIGR03466       146 FLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKP-TPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIG  224 (328)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCC-CcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCC
Confidence            9999999999888899999999999999975432 122233444444433333445578999999999999999876555


Q ss_pred             ceEEEecccCCHHHHHHHHHHhCCCC----CCCCCC--------------CCCC------------CceeechHHHHH-h
Q 020924          246 GRYICTAHMIRARDLVDKLKSLYPNY----NYPKSF--------------TEKE------------DEVMLTSEKLQK-L  294 (319)
Q Consensus       246 ~~~~~~~~~~s~~e~~~~~~~~~g~~----~~~~~~--------------~~~~------------~~~~~d~~k~~~-l  294 (319)
                      ..|+++++.+|++|+++.+.+.+|..    .+|...              ....            ....+|++|+++ |
T Consensus       225 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  304 (328)
T TIGR03466       225 ERYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVREL  304 (328)
T ss_pred             ceEEecCCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHc
Confidence            57888889999999999999999842    111100              0011            245789999998 9


Q ss_pred             CCccccHHHHHHHHHHHHHHcCCC
Q 020924          295 GWSYRSLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       295 g~~~~~~~~~l~~~~~~~~~~~~~  318 (319)
                      ||+|++++++++++++||+++|++
T Consensus       305 g~~p~~~~~~i~~~~~~~~~~~~~  328 (328)
T TIGR03466       305 GYRQRPAREALRDAVEWFRANGYL  328 (328)
T ss_pred             CCCCcCHHHHHHHHHHHHHHhCCC
Confidence            999999999999999999999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=8.8e-41  Score=294.86  Aligned_cols=299  Identities=18%  Similarity=0.153  Sum_probs=221.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      |+|||||||||||++++++|+++|++|++++|...... .....+.. .+.++.++.+|++|.+.+..+++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchH-hHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            47999999999999999999999999999987533221 11111111 12356788999999999998886  5899999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +|+..............+++|+.++.+++++|++.++++||++||..+|+ ..   ...+++|+++..     .|.++|+
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg-~~---~~~~~~E~~~~~-----~p~~~Y~  150 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYG-DQ---PKIPYVESFPTG-----TPQSPYG  150 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhC-CC---CCCccccccCCC-----CCCChhH
Confidence            99865432111223678899999999999999999999999999976544 32   245678887641     1267899


Q ss_pred             hhHHHHHHHHHHhhhhC-CceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhcCc--c---------ccCCcc
Q 020924          163 LSKTEAESEALEFGKKT-GLDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKEGY--E---------SLENKL  222 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~--~---------~~~~~~  222 (319)
                      .+|.++|++++.+++.+ +++++++|++++||+.....        ...+..++.++..+..  +         ..|.+.
T Consensus       151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (338)
T PRK10675        151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE
Confidence            99999999999987653 79999999999999742211        1112234444544331  1         124578


Q ss_pred             cccccHHHHHHHHHHhhccC--CC-CceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC----CCCCCCceeechHHHHH-
Q 020924          223 RMIVDVRDVAEALLLAYEKA--EA-EGRYICT-AHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDEVMLTSEKLQK-  293 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~--~~-~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~----~~~~~~~~~~d~~k~~~-  293 (319)
                      ++|+|++|+|++++.+++..  .. +++||++ ++.+|++|+++.+.+.+|. +.+..    ........++|++|+++ 
T Consensus       231 ~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~k~~~~  309 (338)
T PRK10675        231 RDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASKADRE  309 (338)
T ss_pred             EeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCC-CCCeeeCCCCCCchhhhhcCHHHHHHH
Confidence            99999999999999998752  22 3489876 5889999999999999984 22211    11223457789999998 


Q ss_pred             hCCccc-cHHHHHHHHHHHHHHc
Q 020924          294 LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       294 lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |||+|. +++++++++++|++++
T Consensus       310 lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        310 LNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             hCCCCcCcHHHHHHHHHHHHHhh
Confidence            999999 9999999999999874

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=9.2e-41  Score=288.93  Aligned_cols=271  Identities=13%  Similarity=0.035  Sum_probs=209.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+||||||+||||++++++|+++| +|++++|...                  .+.+|++|.+.+.++++  ++|+||||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~   61 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKIRPDVIVNA   61 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence            479999999999999999999999 7988887532                  23579999999999988  58999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+..........+...+.+|+.++.+|+++|++.++ ++||+||..+|++.    ...|++|+++..|      .++|+.
T Consensus        62 Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~----~~~p~~E~~~~~P------~~~Yg~  130 (299)
T PRK09987         62 AAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGT----GDIPWQETDATAP------LNVYGE  130 (299)
T ss_pred             CccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCC----CCCCcCCCCCCCC------CCHHHH
Confidence            998765533333367789999999999999999986 89999997765443    2457888887655      788999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-c----CCcccccccHHHHHHHHHHh
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-L----ENKLRMIVDVRDVAEALLLA  238 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~i~v~D~a~~~~~~  238 (319)
                      +|..+|++++.++.    +++++||+++|||...   .+...+++.+.++.++. .    |.+.+++.+++|+++++..+
T Consensus       131 sK~~~E~~~~~~~~----~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~  203 (299)
T PRK09987        131 TKLAGEKALQEHCA----KHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVA  203 (299)
T ss_pred             HHHHHHHHHHHhCC----CEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHh
Confidence            99999999987643    5699999999998643   34455666666666544 3    34555667788888888888


Q ss_pred             hccCCCCceEEEe-cccCCHHHHHHHHHHhCCC--CCC--------CC----CCCCCCCceeechHHHHH-hCCccccHH
Q 020924          239 YEKAEAEGRYICT-AHMIRARDLVDKLKSLYPN--YNY--------PK----SFTEKEDEVMLTSEKLQK-LGWSYRSLE  302 (319)
Q Consensus       239 ~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~--~~~--------~~----~~~~~~~~~~~d~~k~~~-lg~~~~~~~  302 (319)
                      +......++||++ ++.+|+.|+++.+.+..+.  ...        +.    ....+.....+|++|+++ |||+|.+|+
T Consensus       204 ~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~~~~  283 (299)
T PRK09987        204 LNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQ  283 (299)
T ss_pred             hccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCccHH
Confidence            7665555799876 5889999999999775431  111        00    111233567899999999 999988999


Q ss_pred             HHHHHHHHHHH
Q 020924          303 ETLVDSVESYK  313 (319)
Q Consensus       303 ~~l~~~~~~~~  313 (319)
                      ++|+++++.+.
T Consensus       284 ~~l~~~~~~~~  294 (299)
T PRK09987        284 VGVKRMLTELF  294 (299)
T ss_pred             HHHHHHHHHHh
Confidence            99999997654

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=4.5e-41  Score=276.95  Aligned_cols=302  Identities=22%  Similarity=0.222  Sum_probs=237.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh--hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD--EKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   80 (319)
                      .++||||||.||||+|.+.+|+++|+.|.+++.-.+.  ....+.+.+.....++.++++|++|.+.++.+|+  .+|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            4689999999999999999999999999999853222  1223333333334789999999999999999998  58999


Q ss_pred             EEecccCCCC-CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCC-ccccccCC
Q 020924           81 FHIACPAPST-TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD-KEYCRTTN  158 (319)
Q Consensus        81 i~~a~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~  158 (319)
                      +|+|+..... +..+| ..+++.|+.|+.+|++.|++++++.+||.||+. +|+.+   ...|++|+++.. |      .
T Consensus        82 ~Hfa~~~~vgeS~~~p-~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssat-vYG~p---~~ip~te~~~t~~p------~  150 (343)
T KOG1371|consen   82 MHFAALAAVGESMENP-LSYYHNNIAGTLNLLEVMKAHNVKALVFSSSAT-VYGLP---TKVPITEEDPTDQP------T  150 (343)
T ss_pred             EeehhhhccchhhhCc-hhheehhhhhHHHHHHHHHHcCCceEEEeccee-eecCc---ceeeccCcCCCCCC------C
Confidence            9999988776 44555 899999999999999999999999999999855 55555   469999999887 4      6


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCC------CCC--CCccHHHHHHHH---------hcCccc--cC
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLL------QSK--VNTSSLVLIKLL---------KEGYES--LE  219 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~------~~~--~~~~~~~~~~~~---------~~~~~~--~~  219 (319)
                      ++||.+|..+|.++..+...++..++.||.++++|...      .+.  ...+...+.+..         -|.+..  .|
T Consensus       151 ~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dg  230 (343)
T KOG1371|consen  151 NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDG  230 (343)
T ss_pred             CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCC
Confidence            78999999999999999988889999999999999211      111  111111111111         222233  45


Q ss_pred             CcccccccHHHHHHHHHHhhccCCCC---ceEEEe-cccCCHHHHHHHHHHhCCC---CCCCCCCCCCCCceeechHHHH
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEAE---GRYICT-AHMIRARDLVDKLKSLYPN---YNYPKSFTEKEDEVMLTSEKLQ  292 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~~---~~~~~~-~~~~s~~e~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~k~~  292 (319)
                      +..|++||+-|.|+....++++....   ++||++ +...++.+|+.++.++.|.   .++-..+.++......+.++++
T Consensus       231 t~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~  310 (343)
T KOG1371|consen  231 TIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQ  310 (343)
T ss_pred             CeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHH
Confidence            68999999999999999999886642   378765 6899999999999999982   2222335555677999999998


Q ss_pred             H-hCCccc-cHHHHHHHHHHHHHHcCC
Q 020924          293 K-LGWSYR-SLEETLVDSVESYKKVGI  317 (319)
Q Consensus       293 ~-lg~~~~-~~~~~l~~~~~~~~~~~~  317 (319)
                      + |||++. +++++++++++|+.++-.
T Consensus       311 ~elgwk~~~~iee~c~dlw~W~~~np~  337 (343)
T KOG1371|consen  311 RELGWKAKYGLQEMLKDLWRWQKQNPS  337 (343)
T ss_pred             HHhCCccccCHHHHHHHHHHHHhcCCC
Confidence            7 999999 999999999999987643

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=9.5e-41  Score=290.85  Aligned_cols=281  Identities=17%  Similarity=0.196  Sum_probs=205.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh---hh-HHHHhc-----Ccc
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY---DS-VKSAIV-----GCN   78 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~-~~~~~~-----~~d   78 (319)
                      |||||||||||++|+++|+++|++++++.|+......  ..         .+..+|+.|.   +. ++.+++     ++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FV---------NLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH--HH---------hhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            8999999999999999999999987777766542111  00         1122455443   33 233332     689


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      +|||+||...... .++ ...++.|+.++.+|+++|++.++ ++||+||.++|+ .+   ...+.+|+++..|      .
T Consensus        71 ~Vih~A~~~~~~~-~~~-~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg-~~---~~~~~~E~~~~~p------~  137 (308)
T PRK11150         71 AIFHEGACSSTTE-WDG-KYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYG-GR---TDDFIEEREYEKP------L  137 (308)
T ss_pred             EEEECceecCCcC-CCh-HHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhC-cC---CCCCCccCCCCCC------C
Confidence            9999998654322 233 46789999999999999999987 799999976554 32   2345667665544      6


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccc--cC--CcccccccHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYES--LE--NKLRMIVDVRDV  231 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~  231 (319)
                      ++|+.+|.++|++++.++.+++++++++||+++||++.....   .....++.++.++....  .|  +..|+|+|++|+
T Consensus       138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~  217 (308)
T PRK11150        138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDV  217 (308)
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHH
Confidence            789999999999999998878999999999999999764321   12233445666665432  23  357999999999


Q ss_pred             HHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCCC-CC---C--CCceeechHHHHHhCCccc--cHH
Q 020924          232 AEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKSF-TE---K--EDEVMLTSEKLQKLGWSYR--SLE  302 (319)
Q Consensus       232 a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~-~~---~--~~~~~~d~~k~~~lg~~~~--~~~  302 (319)
                      |++++.+++.. .+++||++ +..+|+.|+++.+.+..+..++.... +.   .  .....+|++|++++||+|.  +++
T Consensus       218 a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~  296 (308)
T PRK11150        218 AAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVA  296 (308)
T ss_pred             HHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCCCCHH
Confidence            99999998864 35689886 57899999999999998742221111 11   0  1235689999999999974  999


Q ss_pred             HHHHHHHHHHH
Q 020924          303 ETLVDSVESYK  313 (319)
Q Consensus       303 ~~l~~~~~~~~  313 (319)
                      ++|+++++|+.
T Consensus       297 ~gl~~~~~~~~  307 (308)
T PRK11150        297 EGVAEYMAWLN  307 (308)
T ss_pred             HHHHHHHHHhh
Confidence            99999999975

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=6.7e-41  Score=291.66  Aligned_cols=280  Identities=18%  Similarity=0.231  Sum_probs=214.7

Q ss_pred             EEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEeccc
Q 020924            9 CVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHIACP   86 (319)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~   86 (319)
                      ||||||||||++|+++|++.|++|+++.+..                     .+|++|.+++..+++  ++|+|||||+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~---------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~   59 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK---------------------ELDLTRQADVEAFFAKEKPTYVILAAAK   59 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc---------------------cCCCCCHHHHHHHHhccCCCEEEEeeee
Confidence            6999999999999999999999987654321                     379999999999887  57999999997


Q ss_pred             CCCC--CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC-chHHh
Q 020924           87 APST--TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN-NWYCL  163 (319)
Q Consensus        87 ~~~~--~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~  163 (319)
                      ....  ...++ ...++.|+.++.+++++|++.+++++|++||+.+|++.    ...+++|+++...  +..|. .+|+.
T Consensus        60 ~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~----~~~~~~E~~~~~~--~~~p~~~~Y~~  132 (306)
T PLN02725         60 VGGIHANMTYP-ADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKF----APQPIPETALLTG--PPEPTNEWYAI  132 (306)
T ss_pred             ecccchhhhCc-HHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCC----CCCCCCHHHhccC--CCCCCcchHHH
Confidence            5421  22334 67899999999999999999999999999997755432    3567888774321  12223 35999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHH----HHhcCccc----cCCcccccccHHHHH
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIK----LLKEGYES----LENKLRMIVDVRDVA  232 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~----~~~~~~~~----~~~~~~~~i~v~D~a  232 (319)
                      +|.++|.+++.+.++++++++++||+.+||++....   ...+..++.+    ...+.+..    .|++.++|+|++|+|
T Consensus       133 sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~  212 (306)
T PLN02725        133 AKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLA  212 (306)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHH
Confidence            999999999999888899999999999999975321   1233344432    23444433    245789999999999


Q ss_pred             HHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC-CCC--CCCCCCCCceeechHHHHHhCCccc-cHHHHHHH
Q 020924          233 EALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY-NYP--KSFTEKEDEVMLTSEKLQKLGWSYR-SLEETLVD  307 (319)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~-~~~--~~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~  307 (319)
                      ++++.+++.....+.||++ +..+|+.|+++.+.+.++.. .+.  ...........+|++|+++|||+|+ ++++++++
T Consensus       213 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~  292 (306)
T PLN02725        213 DAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQE  292 (306)
T ss_pred             HHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHH
Confidence            9999999876555678776 58999999999999998731 111  1112223456789999988999998 99999999


Q ss_pred             HHHHHHHcC
Q 020924          308 SVESYKKVG  316 (319)
Q Consensus       308 ~~~~~~~~~  316 (319)
                      +++|++++.
T Consensus       293 ~~~~~~~~~  301 (306)
T PLN02725        293 TYKWYLENY  301 (306)
T ss_pred             HHHHHHhhh
Confidence            999999764

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.9e-40  Score=293.20  Aligned_cols=295  Identities=31%  Similarity=0.473  Sum_probs=219.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc------cCCCeEEEEccCCChhhHHHHhcC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK------ASENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      +++|+|||||||||||++++++|+++|++|+++.|+....  ..+..+..      ...+++++.+|++|.+.+.+++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~--~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK--EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            6789999999999999999999999999999988875432  12222211      013578899999999999999999


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEecccc-ccccCC-CCCCCcccCCCCCCCccc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGV-AVGLNP-RWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~-~~~~~~-~~~~~~~~~E~~~~~~~~  153 (319)
                      +|.|||+|+...............++|+.++.+++++|++. +++|+||+||.. .+|+.. ......+++|+++..++.
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            99999999876443211111355788999999999999986 799999999974 344321 000113477877655444


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAE  233 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  233 (319)
                      +..+.++|+.||.++|.+++.+++.++++++++||+++|||+.....   ...+.+...+.....|+..++|+||+|+|+
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~---~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~  285 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN---STATIAYLKGAQEMLADGLLATADVERLAE  285 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC---ChhHHHHhcCCCccCCCCCcCeEEHHHHHH
Confidence            55567889999999999999998888999999999999999754321   112234445543345666678999999999


Q ss_pred             HHHHhhccC---CCCceEEEecccCCHHHHHHHHHHhCCCC-CCC--CCC-CCCCCceeechHHHHH-hCCccc-cHH
Q 020924          234 ALLLAYEKA---EAEGRYICTAHMIRARDLVDKLKSLYPNY-NYP--KSF-TEKEDEVMLTSEKLQK-LGWSYR-SLE  302 (319)
Q Consensus       234 ~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~~~~~~g~~-~~~--~~~-~~~~~~~~~d~~k~~~-lg~~~~-~~~  302 (319)
                      +++.+++..   ..+++|++++..++++|+++.+.+.+|.. ...  ... ..+...+..|++|+++ |||+|+ .++
T Consensus       286 A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~~~~~~  363 (367)
T PLN02686        286 AHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLMSRTRRCCYD  363 (367)
T ss_pred             HHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHHHHhhhcccc
Confidence            999999852   33458988899999999999999999731 111  112 3445678999999998 999987 444

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.3e-39  Score=281.55  Aligned_cols=285  Identities=30%  Similarity=0.522  Sum_probs=216.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH-HHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .+++|||||||||||++++++|+++||+|+++.|+...... ..+..+.....+++++.+|++|.+.+.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            46799999999999999999999999999999986443221 12222221234688999999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccC-CCCCCCcccCCCCCCCccccccCCch
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLN-PRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      +++......  ..+..++++|+.++.+++++|.+. +++|||++||.++++.. .......+++|++|..+.++..+..+
T Consensus        85 ~~~~~~~~~--~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  162 (297)
T PLN02583         85 CFDPPSDYP--SYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW  162 (297)
T ss_pred             eCccCCccc--ccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccH
Confidence            876443211  123678999999999999999987 68999999998765422 11113457888887665544444457


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhc
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      |+.||..+|++++.++++++++++++||++||||......        ..+.+.....++...+|||++|+|++++.+++
T Consensus       163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~  234 (297)
T PLN02583        163 HALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFE  234 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHhc
Confidence            9999999999999998778999999999999999754321        12223322334456689999999999999999


Q ss_pred             cCCCCceEEEecccCC-HHHHHHHHHHhCCCCCCCCCCC---CCCCceeechHHHHHhCCcc
Q 020924          241 KAEAEGRYICTAHMIR-ARDLVDKLKSLYPNYNYPKSFT---EKEDEVMLTSEKLQKLGWSY  298 (319)
Q Consensus       241 ~~~~~~~~~~~~~~~s-~~e~~~~~~~~~g~~~~~~~~~---~~~~~~~~d~~k~~~lg~~~  298 (319)
                      .+...++|++++...+ +.++++++.+.+|..+.+....   .......++++|+++||+++
T Consensus       235 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        235 DVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             CcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccCCCccccccChHHHHHhCccc
Confidence            8877779999987655 5789999999999776654322   22345789999999999875

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-39  Score=283.23  Aligned_cols=292  Identities=29%  Similarity=0.315  Sum_probs=231.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc-ceEEEecc
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGC-NGVFHIAC   85 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-d~vi~~a~   85 (319)
                      +|||||||||||++|+++|+++||+|++++|...+.....        .++.++.+|+++.+...+..+.. |+|||+|+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            4999999999999999999999999999999766431111        25788999999998888888888 99999999


Q ss_pred             cCCCCCCCC-ccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCC-CCCCccccccCCchHHh
Q 020924           86 PAPSTTVPN-PQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET-CWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        86 ~~~~~~~~~-~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~-~~~~~~~~~~~~~~Y~~  163 (319)
                      ......... .+..++++|+.++.+++++|++.+++++||.||.+.+++. .  ...+++|+ .+..|      .++|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~-~--~~~~~~E~~~~~~p------~~~Yg~  144 (314)
T COG0451          74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD-P--PPLPIDEDLGPPRP------LNPYGV  144 (314)
T ss_pred             cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC-C--CCCCcccccCCCCC------CCHHHH
Confidence            876542222 1256899999999999999999999999997776666654 1  34478888 44433      558999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCc-cc---cCCcccccccHHHHHHHHHH
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGY-ES---LENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~-~~---~~~~~~~~i~v~D~a~~~~~  237 (319)
                      +|..+|..++.+.+.++++++++||+++|||+.....  .....++.+...+.+ ..   .++..++|+|++|++++++.
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  224 (314)
T COG0451         145 SKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLL  224 (314)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHH
Confidence            9999999999998878999999999999999876542  233344555666665 33   23477899999999999999


Q ss_pred             hhccCCCCceEEEec-c-cCCHHHHHHHHHHhCCCCCCC----C--CCCCCCCceeechHHHHH-hCCccc-cHHHHHHH
Q 020924          238 AYEKAEAEGRYICTA-H-MIRARDLVDKLKSLYPNYNYP----K--SFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVD  307 (319)
Q Consensus       238 ~~~~~~~~~~~~~~~-~-~~s~~e~~~~~~~~~g~~~~~----~--~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~  307 (319)
                      +++++... .||+++ . ..+++|+++.+.+.+|.....    .  ..........+|++|++. |||.|. ++++++.+
T Consensus       225 ~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~  303 (314)
T COG0451         225 ALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLAD  303 (314)
T ss_pred             HHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHH
Confidence            99988766 888876 4 899999999999999843221    1  122223568899999997 999998 99999999


Q ss_pred             HHHHHHHcC
Q 020924          308 SVESYKKVG  316 (319)
Q Consensus       308 ~~~~~~~~~  316 (319)
                      +++|+....
T Consensus       304 ~~~~~~~~~  312 (314)
T COG0451         304 TLEWLLKKL  312 (314)
T ss_pred             HHHHHHHhh
Confidence            999998764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=6.6e-39  Score=280.30  Aligned_cols=273  Identities=15%  Similarity=0.171  Sum_probs=209.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +++|+|||||||||||++++++|+++|  ++|++++|+..... .......  ..+++++.+|++|.+.+.++++++|+|
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~~iD~V   78 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQW-EMQQKFP--APCLRFFIGDVRDKERLTRALRGVDYV   78 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHH-HHHHHhC--CCcEEEEEccCCCHHHHHHHHhcCCEE
Confidence            357899999999999999999999986  78999988754321 1111111  246889999999999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+||..........+...+++|+.++.+++++|++.++++||++||....                        .|.++
T Consensus        79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~------------------------~p~~~  134 (324)
T TIGR03589        79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA------------------------NPINL  134 (324)
T ss_pred             EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC------------------------CCCCH
Confidence            999997543322222367899999999999999999999999999994321                        11456


Q ss_pred             HHhhHHHHHHHHHHhh---hhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC-ccc--cCCcccccccHHHHHHH
Q 020924          161 YCLSKTEAESEALEFG---KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-YES--LENKLRMIVDVRDVAEA  234 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~---~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~i~v~D~a~~  234 (319)
                      |+.||.++|.+++.++   ..+|++++++||+++||++.    ..+..+......+. +..  .+++.|+|+|++|+|++
T Consensus       135 Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a  210 (324)
T TIGR03589       135 YGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNF  210 (324)
T ss_pred             HHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHH
Confidence            9999999999998754   35699999999999999863    24455555555554 233  35578999999999999


Q ss_pred             HHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCCC-CCceeechHHHHH-hCCccc-cHHHHHHH
Q 020924          235 LLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEK-EDEVMLTSEKLQK-LGWSYR-SLEETLVD  307 (319)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~k~~~-lg~~~~-~~~~~l~~  307 (319)
                      ++.++++...+.+|++++...++.|+++.+.+..+....+. .+.+ .....+|++|+++ |||+|. ++++++++
T Consensus       211 ~~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~~  285 (324)
T TIGR03589       211 VLKSLERMLGGEIFVPKIPSMKITDLAEAMAPECPHKIVGI-RPGEKLHEVMITEDDARHTYELGDYYAILPSISF  285 (324)
T ss_pred             HHHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCCeeEeCC-CCCchhHhhhcChhhhhhhcCCCCeEEEcccccc
Confidence            99999875444578767788999999999999765322222 2222 2336689999998 999999 99999864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2.7e-38  Score=272.81  Aligned_cols=265  Identities=15%  Similarity=0.128  Sum_probs=209.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a   84 (319)
                      +|||||||||||++++++|+++|++|++++|+                      .+|+.+.+.+.+++++  +|+|||+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            58999999999999999999999999999875                      2699999999999986  49999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +..............+++|+.++.+++++|++.+. ++|++||.++|.+.    ...+++|+++..|      .+.|+.+
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~----~~~~~~E~~~~~~------~~~Y~~~  127 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGE----GKRPYREDDATNP------LNVYGQS  127 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCC----CCCCCCCCCCCCC------cchhhHH
Confidence            97544322222367889999999999999998886 89999997655432    3567888876554      6789999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccC-
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKA-  242 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~-  242 (319)
                      |..+|..++.+    +.+++++||+++||+....  .+...++.....+.+.. .+++.++|+|++|+|+++..+++.+ 
T Consensus       128 K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~  201 (287)
T TIGR01214       128 KLAGEQAIRAA----GPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLA  201 (287)
T ss_pred             HHHHHHHHHHh----CCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhcc
Confidence            99999999875    6789999999999997432  23445556665555544 5667889999999999999999876 


Q ss_pred             CCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC-------------CC-CCCCCceeechHHHHH-hCCccccHHHHHH
Q 020924          243 EAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK-------------SF-TEKEDEVMLTSEKLQK-LGWSYRSLEETLV  306 (319)
Q Consensus       243 ~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~-------------~~-~~~~~~~~~d~~k~~~-lg~~~~~~~~~l~  306 (319)
                      ..+++||++ ++.+|+.|+++.+.+.+|......             .. ........+|++|+++ |||.+.+++++|.
T Consensus       202 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~~~~~~l~  281 (287)
T TIGR01214       202 RARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALR  281 (287)
T ss_pred             CCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCccHHHHHH
Confidence            356789776 589999999999999998432100             00 1112446899999999 9997679999999


Q ss_pred             HHHH
Q 020924          307 DSVE  310 (319)
Q Consensus       307 ~~~~  310 (319)
                      ++++
T Consensus       282 ~~~~  285 (287)
T TIGR01214       282 AYLQ  285 (287)
T ss_pred             HHHh
Confidence            8875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=5e-38  Score=274.58  Aligned_cols=284  Identities=19%  Similarity=0.114  Sum_probs=212.2

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----CcceEEE
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----GCNGVFH   82 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~   82 (319)
                      |||||||||||++++++|.++|+ +|++++|......   +..+     ....+..|+.+.+.++.+.+    ++|+|||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~---~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh   72 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK---FLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFH   72 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh---hhhh-----hheeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence            69999999999999999999997 7988877654221   1111     11346678888877777654    7999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +|+..... ..++ ...+++|+.++.+++++|++.++ ++|++||.++| +..    ..+++|+++..     .|.++|+
T Consensus        73 ~A~~~~~~-~~~~-~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy-~~~----~~~~~e~~~~~-----~p~~~Y~  139 (314)
T TIGR02197        73 QGACSDTT-ETDG-EYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATY-GDG----EAGFREGRELE-----RPLNVYG  139 (314)
T ss_pred             CccccCcc-ccch-HHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhc-CCC----CCCcccccCcC-----CCCCHHH
Confidence            99965432 2333 67889999999999999999887 89999996654 432    23456655321     2367899


Q ss_pred             hhHHHHHHHHHHhhh--hCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccc---------cCCcccccccH
Q 020924          163 LSKTEAESEALEFGK--KTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYES---------LENKLRMIVDV  228 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~--~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~v  228 (319)
                      .+|..+|.+++++..  ..+++++++||+++||++....   ...+..++.++..+.++.         .|++.++|+|+
T Consensus       140 ~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (314)
T TIGR02197       140 YSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV  219 (314)
T ss_pred             HHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEH
Confidence            999999999987643  2357999999999999975432   133445566666665442         24477999999


Q ss_pred             HHHHHHHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC-CCCC-CCC-----CCCceeechHHHHH-hCCccc
Q 020924          229 RDVAEALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN-YPKS-FTE-----KEDEVMLTSEKLQK-LGWSYR  299 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-~~~~-~~~-----~~~~~~~d~~k~~~-lg~~~~  299 (319)
                      +|++++++.++.. ...++||+++ .++|++|+++.+.+.+|... +... .+.     ......+|++|+++ +||+|+
T Consensus       220 ~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~  298 (314)
T TIGR02197       220 KDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPF  298 (314)
T ss_pred             HHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCc
Confidence            9999999999987 4567898765 89999999999999998321 1100 111     11346789999998 899999


Q ss_pred             -cHHHHHHHHHHHHH
Q 020924          300 -SLEETLVDSVESYK  313 (319)
Q Consensus       300 -~~~~~l~~~~~~~~  313 (319)
                       +++++++++++|+.
T Consensus       299 ~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       299 TTLEEGVKDYVQWLL  313 (314)
T ss_pred             ccHHHHHHHHHHHHh
Confidence             99999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.9e-38  Score=270.16  Aligned_cols=250  Identities=30%  Similarity=0.284  Sum_probs=189.5

Q ss_pred             EEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEeccc
Q 020924            9 CVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACP   86 (319)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   86 (319)
                      ||||||||||++|+++|+++|  ++|++++++...........    .+..+++.+|++|.+++.++++++|+|||+|+.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~----~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~   76 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK----SGVKEYIQGDITDPESLEEALEGVDVVFHTAAP   76 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc----ccceeEEEeccccHHHHHHHhcCCceEEEeCcc
Confidence            699999999999999999999  89999998776432111111    123448999999999999999999999999997


Q ss_pred             CCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHH
Q 020924           87 APSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKT  166 (319)
Q Consensus        87 ~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~  166 (319)
                      ..... ..+.+.++++|+.||.+++++|++.+++++||+||.+++........-...+|+.|..+    .+.++|+.||.
T Consensus        77 ~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~----~~~~~Y~~SK~  151 (280)
T PF01073_consen   77 VPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS----SPLDPYAESKA  151 (280)
T ss_pred             ccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc----cccCchHHHHH
Confidence            65543 23447899999999999999999999999999999988775321011122356654332    35788999999


Q ss_pred             HHHHHHHHhhh---hC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHh
Q 020924          167 EAESEALEFGK---KT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLA  238 (319)
Q Consensus       167 ~~e~~~~~~~~---~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~  238 (319)
                      .+|++++++..   +.  .+..++|||+.||||++....   ..+......+....   .++...+|+|++|+|.+++.+
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~---~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA  228 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV---PRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLA  228 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCccccccc---chhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHH
Confidence            99999999866   22  499999999999999865432   23333344442222   344779999999999999887


Q ss_pred             hcc---C----CCCc-eEEEec-ccCC-HHHHHHHHHHhCCC
Q 020924          239 YEK---A----EAEG-RYICTA-HMIR-ARDLVDKLKSLYPN  270 (319)
Q Consensus       239 ~~~---~----~~~~-~~~~~~-~~~s-~~e~~~~~~~~~g~  270 (319)
                      ++.   +    ...| .|++++ ++.+ ++|+...+.+.+|.
T Consensus       229 ~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~  270 (280)
T PF01073_consen  229 AQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGY  270 (280)
T ss_pred             HHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCC
Confidence            653   2    2233 787775 8888 99999999999983

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1.3e-37  Score=273.46  Aligned_cols=296  Identities=20%  Similarity=0.211  Sum_probs=218.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a   84 (319)
                      +||||||||+||++++++|+++|++|++++|..... ...+..... ..+++++.+|+++.+++.++++  ++|+|||+|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGS-PEALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccc-hhhhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            589999999999999999999999999887643321 111111111 1257888999999999999886  689999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      |..............++.|+.++.+++++|.+.+++++|++||.+.++ ..   ...+++|+++..|      .+.|+.+
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g-~~---~~~~~~e~~~~~~------~~~y~~s  148 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYG-EP---SSIPISEDSPLGP------INPYGRS  148 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcC-CC---CCCCccccCCCCC------CCchHHH
Confidence            975433222223677899999999999999999989999999966553 32   2446788876554      6779999


Q ss_pred             HHHHHHHHHHhhhh-CCceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhc-Ccc---------ccCCccccc
Q 020924          165 KTEAESEALEFGKK-TGLDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKE-GYE---------SLENKLRMI  225 (319)
Q Consensus       165 K~~~e~~~~~~~~~-~~~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~-~~~---------~~~~~~~~~  225 (319)
                      |.++|.+++.++++ .+++++++||+.+||+.....        ...+..+....... ...         ..|+..++|
T Consensus       149 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  228 (328)
T TIGR01179       149 KLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDY  228 (328)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEee
Confidence            99999999998876 689999999999999864321        11222222222211 111         133467899


Q ss_pred             ccHHHHHHHHHHhhccC---CCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC----CCCCCCceeechHHHHH-hCC
Q 020924          226 VDVRDVAEALLLAYEKA---EAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDEVMLTSEKLQK-LGW  296 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~---~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~----~~~~~~~~~~d~~k~~~-lg~  296 (319)
                      ||++|++++++.++...   ..+++||++ +..+|++|+++.+.+.+|. +.+..    .........+|++|+++ |||
T Consensus       229 v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~  307 (328)
T TIGR01179       229 IHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGV-DFPVELAPRRPGDPASLVADASKIRRELGW  307 (328)
T ss_pred             eeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCC-CcceEeCCCCCccccchhcchHHHHHHhCC
Confidence            99999999999998752   234589885 5899999999999999984 22211    11112345679999988 999


Q ss_pred             ccc-c-HHHHHHHHHHHHHHc
Q 020924          297 SYR-S-LEETLVDSVESYKKV  315 (319)
Q Consensus       297 ~~~-~-~~~~l~~~~~~~~~~  315 (319)
                      +|. + ++++|+++++|++++
T Consensus       308 ~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       308 QPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             CCCcchHHHHHHHHHHHHhcC
Confidence            998 5 999999999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=7.5e-38  Score=268.11  Aligned_cols=267  Identities=24%  Similarity=0.254  Sum_probs=194.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+||||||+|+||++++++|.++|++|+++.|+                      ..|++|.+.+.+.+.  .+|+||||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAFKPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHhCCCeEecc
Confidence            689999999999999999999999999998766                      259999999999987  48999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      ||....+..+..++..+.+|+.++.+|+++|.+.+. ++||+||..++.+.    ...+++|+++.+|      .+.||.
T Consensus        59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~----~~~~y~E~d~~~P------~~~YG~  127 (286)
T PF04321_consen   59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGD----KGGPYTEDDPPNP------LNVYGR  127 (286)
T ss_dssp             -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SS----TSSSB-TTS----------SSHHHH
T ss_pred             ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCC----cccccccCCCCCC------CCHHHH
Confidence            998765433333488999999999999999999997 99999998877665    3677899987766      899999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccC
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +|..+|+.+++...    ++.|+|++.+||+..   ..++..++..+.+++.+. ..+..++.++++|+|+++..++++.
T Consensus       128 ~K~~~E~~v~~~~~----~~~IlR~~~~~g~~~---~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~  200 (286)
T PF04321_consen  128 SKLEGEQAVRAACP----NALILRTSWVYGPSG---RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKN  200 (286)
T ss_dssp             HHHHHHHHHHHH-S----SEEEEEE-SEESSSS---SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcC----CEEEEecceecccCC---CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhc
Confidence            99999999998533    689999999999932   245566667777777666 6678899999999999999999876


Q ss_pred             CC----CceEEEec-ccCCHHHHHHHHHHhCCCCC-----CC----CCCCCCCCceeechHHHHH-hCCccccHHHHHHH
Q 020924          243 EA----EGRYICTA-HMIRARDLVDKLKSLYPNYN-----YP----KSFTEKEDEVMLTSEKLQK-LGWSYRSLEETLVD  307 (319)
Q Consensus       243 ~~----~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-----~~----~~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~l~~  307 (319)
                      ..    .|+|++++ +.+|+.|+++.+.+.+|...     .+    ...........+|++|++. ||+++.+|+++|++
T Consensus       201 ~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~l~~  280 (286)
T PF04321_consen  201 LSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPPPWREGLEE  280 (286)
T ss_dssp             HH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS---BHHHHHHH
T ss_pred             ccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCcCHHHHHHH
Confidence            43    68997765 88999999999999997221     00    1112233568999999999 89999999999999


Q ss_pred             HHHHH
Q 020924          308 SVESY  312 (319)
Q Consensus       308 ~~~~~  312 (319)
                      +++.|
T Consensus       281 ~~~~~  285 (286)
T PF04321_consen  281 LVKQY  285 (286)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98765

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.7e-36  Score=249.66  Aligned_cols=264  Identities=20%  Similarity=0.189  Sum_probs=221.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a   84 (319)
                      +|||||++|++|++|++.|. .+++|++++|..                      .|++|.+.+.++++  .+|+|||+|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            49999999999999999998 779999988753                      59999999999998  579999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +.+..+..+..++..+.+|..++.+++++|++.|. ++||+||.+++.|.    ...++.|+++.+|      .+.||.|
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~----~~~~Y~E~D~~~P------~nvYG~s  127 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGE----KGGPYKETDTPNP------LNVYGRS  127 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCC----CCCCCCCCCCCCC------hhhhhHH
Confidence            99998866655689999999999999999999998 99999999888776    3678999998777      8999999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccCC
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      |+++|..++.+.    -+..|+|.+++||....   ++...+++...+++.+. ..++..+.+++.|+|+++..++....
T Consensus       128 Kl~GE~~v~~~~----~~~~I~Rtswv~g~~g~---nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~  200 (281)
T COG1091         128 KLAGEEAVRAAG----PRHLILRTSWVYGEYGN---NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK  200 (281)
T ss_pred             HHHHHHHHHHhC----CCEEEEEeeeeecCCCC---CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc
Confidence            999999999874    45799999999998652   34455666666776666 66799999999999999999999887


Q ss_pred             CCceEEEec-ccCCHHHHHHHHHHhCC---CCCCCCCC------CCCCCceeechHHHHH-hCCccccHHHHHHHHHHH
Q 020924          244 AEGRYICTA-HMIRARDLVDKLKSLYP---NYNYPKSF------TEKEDEVMLTSEKLQK-LGWSYRSLEETLVDSVES  311 (319)
Q Consensus       244 ~~~~~~~~~-~~~s~~e~~~~~~~~~g---~~~~~~~~------~~~~~~~~~d~~k~~~-lg~~~~~~~~~l~~~~~~  311 (319)
                      ..++|++++ ...||.|+++.+.+.++   ...-+...      .++.....+|+.|+++ +|+.+..|+++++++++.
T Consensus       201 ~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~  279 (281)
T COG1091         201 EGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDE  279 (281)
T ss_pred             cCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhh
Confidence            777998886 66799999999999986   21111111      1222347799999998 899999999999998864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-36  Score=245.46  Aligned_cols=300  Identities=21%  Similarity=0.198  Sum_probs=240.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHH--HHhhhc-cCCCeEEEEccCCChhhHHHHhc--Ccce
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR--LYELEK-ASENLKLFKADLLDYDSVKSAIV--GCNG   79 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   79 (319)
                      +|+.||||-||+-|++|++.|+++||+|+++.|+.+.....+  +.+... .+.+++++.+|++|...+..+++  ++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            589999999999999999999999999999999865543332  222222 13468999999999999999987  6899


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCcccCCCCCCCccccccC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |+|+||......+.+.+..+.+++-.|+.+|+++.|..+.  -||...|| +..+|..   ...|.+|++|..|      
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQASt-SE~fG~v---~~~pq~E~TPFyP------  151 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQAST-SELYGLV---QEIPQKETTPFYP------  151 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEeccc-HHhhcCc---ccCccccCCCCCC------
Confidence            9999999887744444489999999999999999998864  37888888 6666654   4788999999887      


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc--cCC--cccccccHHHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES--LEN--KLRMIVDVRDV  231 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~--~~~~~i~v~D~  231 (319)
                      .+||+.+|..+..+...|.+.||+-.+.-+.+|--+|.+...+  ..+...+.++..|..-.  .||  ..|||-|+.|.
T Consensus       152 rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY  231 (345)
T COG1089         152 RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY  231 (345)
T ss_pred             CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence            8999999999999999999999999998888888888765443  33445555666665433  666  89999999999


Q ss_pred             HHHHHHhhccCCCCceE-EEecccCCHHHHHHHHHHhCC-CCCCC-----------------------CCCCCCCCceee
Q 020924          232 AEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYP-NYNYP-----------------------KSFTEKEDEVML  286 (319)
Q Consensus       232 a~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~~~~~~g-~~~~~-----------------------~~~~~~~~~~~~  286 (319)
                      +++++.+++++.+ ..| +.+|...|++|++++..+..| .+.|.                       ..+|........
T Consensus       232 Ve~mwlmLQq~~P-ddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llg  310 (345)
T COG1089         232 VEAMWLMLQQEEP-DDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLG  310 (345)
T ss_pred             HHHHHHHHccCCC-CceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcC
Confidence            9999999998874 556 677999999999999999988 12221                       111222244889


Q ss_pred             chHHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          287 TSEKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       287 d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |.+|+++ |||+|. +|++.+++|+++..+.
T Consensus       311 dp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~  341 (345)
T COG1089         311 DPTKAKEKLGWRPEVSLEELVREMVEADLEA  341 (345)
T ss_pred             CHHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence            9999998 999999 9999999999987654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=8.1e-37  Score=238.01  Aligned_cols=284  Identities=16%  Similarity=0.213  Sum_probs=228.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   80 (319)
                      +|+|||||++|.+|+++++.+...|.  +-.++.-+.                     .+|+++.++.+++|.  ++..|
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~ekPthV   59 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESEKPTHV   59 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhccCCcee
Confidence            47999999999999999999998875  212221111                     269999999999997  58999


Q ss_pred             EEecccCCCC--CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           81 FHIACPAPST--TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        81 i~~a~~~~~~--~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      ||+|+..+.-  ....+ .+++..|+...-|++..|.++|+++++++.|++.+...    ...|++|+...+.+ |....
T Consensus        60 IhlAAmVGGlf~N~~yn-ldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdk----t~yPIdEtmvh~gp-phpsN  133 (315)
T KOG1431|consen   60 IHLAAMVGGLFHNNTYN-LDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDK----TSYPIDETMVHNGP-PHPSN  133 (315)
T ss_pred             eehHhhhcchhhcCCCc-hHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCC----CCCCCCHHHhccCC-CCCCc
Confidence            9999976543  23344 78999999999999999999999999999997754433    47889998765542 22235


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHh----cC-ccc---cCCccccccc
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLK----EG-YES---LENKLRMIVD  227 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~----~~-~~~---~~~~~~~~i~  227 (319)
                      -+|+.+|..+....+.|..++|..++.+-|.++|||.++.+.   ..++.++.+...    |. .+.   .|.++|+|+|
T Consensus       134 ~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiy  213 (315)
T KOG1431|consen  134 FGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIY  213 (315)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhh
Confidence            679999999888889999999999999999999999887653   567777765432    22 222   4569999999


Q ss_pred             HHHHHHHHHHhhccCCCCc-eEEEecc--cCCHHHHHHHHHHhCC---CCCCCCCCCCCCCceeechHHHHHhCCccc--
Q 020924          228 VRDVAEALLLAYEKAEAEG-RYICTAH--MIRARDLVDKLKSLYP---NYNYPKSFTEKEDEVMLTSEKLQKLGWSYR--  299 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~~~-~~~~~~~--~~s~~e~~~~~~~~~g---~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~--  299 (319)
                      ++|+|+++++++.+-+.-+ +.+.+|+  .+|++|++++..++++   +..+....++..++..+|++|+++|+|.+.  
T Consensus       214 s~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL~sl~pd~~ft  293 (315)
T KOG1431|consen  214 SDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKLRSLLPDFKFT  293 (315)
T ss_pred             HhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHHHHhCCCcccC
Confidence            9999999999998865544 4444564  9999999999999984   677888888999999999999999999987  


Q ss_pred             cHHHHHHHHHHHHHHc
Q 020924          300 SLEETLVDSVESYKKV  315 (319)
Q Consensus       300 ~~~~~l~~~~~~~~~~  315 (319)
                      +|+++|.+.++||.+|
T Consensus       294 ~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  294 PLEQAISETVQWYLDN  309 (315)
T ss_pred             hHHHHHHHHHHHHHHh
Confidence            6999999999999875

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=6.8e-36  Score=266.85  Aligned_cols=274  Identities=18%  Similarity=0.195  Sum_probs=204.8

Q ss_pred             CCCeEEEe----CcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHH------HHHhhhccCCCeEEEEccCCChhhHHHH
Q 020924            4 EKERVCVT----GAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNA------RLYELEKASENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         4 ~~~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      ++|+||||    |||||||++++++|+++||+|++++|+.......      ...++.  ..+++++.+|+.|   +.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence            35789999    9999999999999999999999999986532110      011111  1358899999977   4444


Q ss_pred             h--cCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           74 I--VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        74 ~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      +  .++|+|||+++.                +..++.+++++|++.|+++|||+||..+|+..    ...+..|+++..|
T Consensus       126 ~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~----~~~p~~E~~~~~p  185 (378)
T PLN00016        126 VAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKS----DEPPHVEGDAVKP  185 (378)
T ss_pred             hccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCC----CCCCCCCCCcCCC
Confidence            4  478999998642                13467889999999999999999997655432    2346677766544


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccH
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDV  228 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v  228 (319)
                               +. +|..+|.++++    .+++++++||+++||+....  .....++.+...+.++.   .|++.++|+|+
T Consensus       186 ---------~~-sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v  249 (378)
T PLN00016        186 ---------KA-GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHV  249 (378)
T ss_pred             ---------cc-hHHHHHHHHHH----cCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecH
Confidence                     22 89999987754    48999999999999997543  23345566666776654   34578999999


Q ss_pred             HHHHHHHHHhhccCCC-CceEEEec-ccCCHHHHHHHHHHhCCCCC-C---CCCC---------CCCCCceeechHHHHH
Q 020924          229 RDVAEALLLAYEKAEA-EGRYICTA-HMIRARDLVDKLKSLYPNYN-Y---PKSF---------TEKEDEVMLTSEKLQK  293 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-~---~~~~---------~~~~~~~~~d~~k~~~  293 (319)
                      +|+|++++.+++++.. +++|++++ ..+|+.|+++.+.+.+|... +   +...         +........|++|+++
T Consensus       250 ~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~  329 (378)
T PLN00016        250 KDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKE  329 (378)
T ss_pred             HHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHH
Confidence            9999999999987644 45898775 78999999999999998421 1   1100         0111234579999998


Q ss_pred             -hCCccc-cHHHHHHHHHHHHHHcCCC
Q 020924          294 -LGWSYR-SLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       294 -lg~~~~-~~~~~l~~~~~~~~~~~~~  318 (319)
                       |||+|. +++++|+++++||+.+|.+
T Consensus       330 ~LGw~p~~~l~egl~~~~~~~~~~~~~  356 (378)
T PLN00016        330 ELGWTPKFDLVEDLKDRYELYFGRGRD  356 (378)
T ss_pred             hcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence             999999 9999999999999998865

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=7e-36  Score=250.40  Aligned_cols=228  Identities=29%  Similarity=0.333  Sum_probs=188.1

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc--ceEEEecc
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGC--NGVFHIAC   85 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vi~~a~   85 (319)
                      |||||||||||++++++|+++|+.|+++.|+..........      .+++++.+|+.|.+.+..+++..  |+|||+|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------ceEEEEEeeccccccccccccccCceEEEEeec
Confidence            79999999999999999999999999999987754221111      27899999999999999999854  99999998


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ..............++.|+.++.+++++|++.+++++|++||+..|...    ...+++|+++..|      .++|+.+|
T Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~----~~~~~~e~~~~~~------~~~Y~~~K  144 (236)
T PF01370_consen   75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP----DGEPIDEDSPINP------LSPYGASK  144 (236)
T ss_dssp             SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS----SSSSBETTSGCCH------SSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccccc------cccccccc
Confidence            7532111122378899999999999999999999999999996555433    3677899987655      78899999


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCC--CCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhhc
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPL--LQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      ...|..++.+.++++++++++||+++||+.  .......+..++.++..+++..   .+++.++|+|++|+|++++.+++
T Consensus       145 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  224 (236)
T PF01370_consen  145 RAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALE  224 (236)
T ss_dssp             HHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHh
Confidence            999999999998889999999999999998  1222356677888888888654   45689999999999999999999


Q ss_pred             cCC-CCceEEEe
Q 020924          241 KAE-AEGRYICT  251 (319)
Q Consensus       241 ~~~-~~~~~~~~  251 (319)
                      ++. .+++||++
T Consensus       225 ~~~~~~~~yNig  236 (236)
T PF01370_consen  225 NPKAAGGIYNIG  236 (236)
T ss_dssp             HSCTTTEEEEES
T ss_pred             CCCCCCCEEEeC
Confidence            988 66789874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-34  Score=248.35  Aligned_cols=299  Identities=26%  Similarity=0.258  Sum_probs=223.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++.+++||||+||+|+|++++|++++  .+|++++..+.......  +... ...+++++.+|++|...+..+++++ .|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~--e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPA--ELTGFRSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccch--hhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence            66899999999999999999999988  89999998765221111  1111 1367899999999999999999999 89


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      +|||+....+......+..+++||.||.+++++|++.+++++||+||..++.+..   .-...+|+.|..    ....++
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~---~~~n~~E~~p~p----~~~~d~  152 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGE---PIINGDESLPYP----LKHIDP  152 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCe---ecccCCCCCCCc----cccccc
Confidence            9998876655333323889999999999999999999999999999998877653   123344544332    223467


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~  237 (319)
                      |+.||..+|.++++.+...++..++|||+.||||++..   ..+..+.-+..+....   .++.+.||++++.++.+.+.
T Consensus       153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~---~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahil  229 (361)
T KOG1430|consen  153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR---LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHIL  229 (361)
T ss_pred             cchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc---ccHHHHHHHHccCceEEeeccccccceEEechhHHHHHH
Confidence            99999999999999986567999999999999998753   3344444455555444   33478899999988888765


Q ss_pred             hhc-----cCCCCc-eEEEe-cccCCHHHHHHHHHHhCCCCCCC------CCC-------------------CCCC----
Q 020924          238 AYE-----KAEAEG-RYICT-AHMIRARDLVDKLKSLYPNYNYP------KSF-------------------TEKE----  281 (319)
Q Consensus       238 ~~~-----~~~~~~-~~~~~-~~~~s~~e~~~~~~~~~g~~~~~------~~~-------------------~~~~----  281 (319)
                      +..     .+...| .|+++ +.+....+....+.+.+|. ..+      .+.                   +...    
T Consensus       230 A~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~-~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v  308 (361)
T KOG1430|consen  230 AARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGY-CLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRV  308 (361)
T ss_pred             HHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCC-CCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhhe
Confidence            543     233445 67665 5788777777788888872 112      110                   0000    


Q ss_pred             ----CceeechHHHHH-hCCccc-cHHHHHHHHHHHHHHcC
Q 020924          282 ----DEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       282 ----~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                          ....++++|++. |||.|. ++++++.+++.|+....
T Consensus       309 ~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~  349 (361)
T KOG1430|consen  309 ALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASES  349 (361)
T ss_pred             eeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhh
Confidence                137899999998 999999 99999999999887643

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.9e-33  Score=245.41  Aligned_cols=261  Identities=18%  Similarity=0.171  Sum_probs=192.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|+|||||||||++++++|+++||+|++++|+.++.  ..+.     ..+++++.+|++|++++.++++++|+|||+++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~--~~l~-----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA--SFLK-----EWGAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh--hhHh-----hcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            4799999999999999999999999999999986432  1111     13689999999999999999999999999875


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ...    .++ ..+.++|+.++.+++++|++++++|||++||..+. ..+                      .++|..+|
T Consensus        74 ~~~----~~~-~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~-~~~----------------------~~~~~~~K  125 (317)
T CHL00194         74 SRP----SDL-YNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE-QYP----------------------YIPLMKLK  125 (317)
T ss_pred             CCC----CCc-cchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc-ccC----------------------CChHHHHH
Confidence            321    233 56788999999999999999999999999985321 000                      23489999


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHHhhccCC
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ..+|.+++.    .+++++++||+.+|+...       ..+....+.+.+..  .+++.++|||++|+|+++..+++.+.
T Consensus       126 ~~~e~~l~~----~~l~~tilRp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  194 (317)
T CHL00194        126 SDIEQKLKK----SGIPYTIFRLAGFFQGLI-------SQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE  194 (317)
T ss_pred             HHHHHHHHH----cCCCeEEEeecHHhhhhh-------hhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc
Confidence            999988754    589999999999886421       11112222333332  34477899999999999999998754


Q ss_pred             C-CceEEEec-ccCCHHHHHHHHHHhCCCC----CCCCCCC----------------CCC----------CceeechHHH
Q 020924          244 A-EGRYICTA-HMIRARDLVDKLKSLYPNY----NYPKSFT----------------EKE----------DEVMLTSEKL  291 (319)
Q Consensus       244 ~-~~~~~~~~-~~~s~~e~~~~~~~~~g~~----~~~~~~~----------------~~~----------~~~~~d~~k~  291 (319)
                      . +++|++++ +.+|++|+++.+.+..|..    ++|....                ...          .....+.+++
T Consensus       195 ~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  274 (317)
T CHL00194        195 TKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAEL  274 (317)
T ss_pred             ccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHH
Confidence            4 45898765 8999999999999998731    1111100                000          1134567788


Q ss_pred             HH-hCCcc---ccHHHHHHHHHHHH
Q 020924          292 QK-LGWSY---RSLEETLVDSVESY  312 (319)
Q Consensus       292 ~~-lg~~~---~~~~~~l~~~~~~~  312 (319)
                      ++ ||+.|   .++++++++++.-.
T Consensus       275 ~~~~g~~p~~~~~~~~~~~~~~~~~  299 (317)
T CHL00194        275 YKIFKIDPNELISLEDYFQEYFERI  299 (317)
T ss_pred             HHHhCCChhhhhhHHHHHHHHHHHH
Confidence            88 99997   38888888777543

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=5.9e-33  Score=262.99  Aligned_cols=245  Identities=24%  Similarity=0.260  Sum_probs=189.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|+|||||||||++++++|+++|++|++++|+....       .   ..+++++.+|++|.+++..+++++|+|||+|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~-------~---~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa   70 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS-------W---PSSADFIAADIRDATAVESAMTGADVVAHCAW   70 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh-------c---ccCceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence            4799999999999999999999999999999875321       0   13578899999999999999999999999997


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ...         ..+++|+.++.+++++|++.++++||++||..                                   |
T Consensus        71 ~~~---------~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-----------------------------------K  106 (854)
T PRK05865         71 VRG---------RNDHINIDGTANVLKAMAETGTGRIVFTSSGH-----------------------------------Q  106 (854)
T ss_pred             ccc---------chHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-----------------------------------H
Confidence            532         14689999999999999999999999999831                                   6


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC--cccccccHHHHHHHHHHhhccCC
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN--KLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      .++|+++.+    ++++++++||+++||++.       ..++.+.........|+  ..++|||++|+|++++.++++..
T Consensus       107 ~aaE~ll~~----~gl~~vILRp~~VYGP~~-------~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~  175 (854)
T PRK05865        107 PRVEQMLAD----CGLEWVAVRCALIFGRNV-------DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV  175 (854)
T ss_pred             HHHHHHHHH----cCCCEEEEEeceEeCCCh-------HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC
Confidence            777877643    589999999999999862       12333333222222333  56799999999999999986543


Q ss_pred             -CCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC--CCC---C---CCCceeechHHHHH-hCCccc-cHHHHHHHHHHH
Q 020924          244 -AEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK--SFT---E---KEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVES  311 (319)
Q Consensus       244 -~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~--~~~---~---~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~  311 (319)
                       .+++||++ +..+|++|+++.+.+.......+.  ...   .   ......+|++|+++ |||+|+ +++++|+++++|
T Consensus       176 ~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~  255 (854)
T PRK05865        176 IDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLA  255 (854)
T ss_pred             cCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence             35689776 588999999999987542111110  000   0   01234689999998 999999 999999999999


Q ss_pred             HHHc
Q 020924          312 YKKV  315 (319)
Q Consensus       312 ~~~~  315 (319)
                      |+.+
T Consensus       256 ~r~r  259 (854)
T PRK05865        256 VRGR  259 (854)
T ss_pred             HHhh
Confidence            9864

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=3e-33  Score=241.91  Aligned_cols=271  Identities=19%  Similarity=0.201  Sum_probs=187.6

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecccC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPA   87 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   87 (319)
                      |||||||||||++++++|+++|++|++++|+........         ...  ..|+.. ..+...+.++|+|||+|+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK---------WEG--YKPWAP-LAESEALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc---------cee--eecccc-cchhhhcCCCCEEEECCCCC
Confidence            699999999999999999999999999999876421100         001  112322 44556778899999999965


Q ss_pred             CCCC--CCCccchhhhhHHHHHHHHHHHHHhCCCC--EEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           88 PSTT--VPNPQMELLEPAVKGTLNVVKACLEAKVK--RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        88 ~~~~--~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~--~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      ....  ..+....++++|+.++.+++++|++.+++  ++|+.||+. +|+..   ...+++|+++..+      .+.|+.
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~-~yg~~---~~~~~~E~~~~~~------~~~~~~  138 (292)
T TIGR01777        69 IADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVG-YYGTS---EDRVFTEEDSPAG------DDFLAE  138 (292)
T ss_pred             cccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEE-EeCCC---CCCCcCcccCCCC------CChHHH
Confidence            4321  11223567889999999999999999874  455555533 44432   2456788874332      344666


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHH--HHHhcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLI--KLLKEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      .+...|..+..+. +.+++++++||+.+||+...    ....++.  ....+.+...+++.++|+|++|+|++++.++++
T Consensus       139 ~~~~~e~~~~~~~-~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~  213 (292)
T TIGR01777       139 LCRDWEEAAQAAE-DLGTRVVLLRTGIVLGPKGG----ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALEN  213 (292)
T ss_pred             HHHHHHHHhhhch-hcCCceEEEeeeeEECCCcc----hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcC
Confidence            7767777666543 45899999999999999642    1122221  111222333566889999999999999999988


Q ss_pred             CCCCceEEEe-cccCCHHHHHHHHHHhCCCC---CCCCCCCC---------CCCceeechHHHHHhCCccc--cHHHHH
Q 020924          242 AEAEGRYICT-AHMIRARDLVDKLKSLYPNY---NYPKSFTE---------KEDEVMLTSEKLQKLGWSYR--SLEETL  305 (319)
Q Consensus       242 ~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~---~~~~~~~~---------~~~~~~~d~~k~~~lg~~~~--~~~~~l  305 (319)
                      +...++|+++ +.++|++|+++.+.+.+|..   .+|.+...         .......+++|++++||+|.  +++|++
T Consensus       214 ~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       214 ASISGPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL  292 (292)
T ss_pred             cccCCceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence            7667789776 58999999999999999842   12211100         01236678899999999998  588763

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=1.2e-32  Score=251.73  Aligned_cols=267  Identities=19%  Similarity=0.173  Sum_probs=189.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC---CeEEEEEcCCChhh-HHHHH-hhhc------------------cCCCeEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD---YFVHGTAREPSDEK-NARLY-ELEK------------------ASENLKL   59 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-~~~~~-~~~~------------------~~~~~~~   59 (319)
                      .++|+|||||||||||++++++|++.+   .+|+++.|...... ..++. ++..                  ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            367899999999999999999999764   46899999765321 11211 1100                  0157899


Q ss_pred             EEccCC-------ChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEecccccc
Q 020924           60 FKADLL-------DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAV  131 (319)
Q Consensus        60 ~~~Dl~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~  131 (319)
                      +.+|++       +.+.+..+++++|+|||+||.....   .++...+++|+.|+.+++++|++. +++++||+||.+++
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD---ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc---CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            999998       4455677888999999999976542   334788999999999999999986 78899999997766


Q ss_pred             ccCCCCCCCcccCCCC-C-----C-----------------------------------CccccccCCchHHhhHHHHHH
Q 020924          132 GLNPRWPKGQIMDETC-W-----S-----------------------------------DKEYCRTTNNWYCLSKTEAES  170 (319)
Q Consensus       132 ~~~~~~~~~~~~~E~~-~-----~-----------------------------------~~~~~~~~~~~Y~~sK~~~e~  170 (319)
                      +...+...+.++++.. +     .                                   .+.....+.++|+.||..+|.
T Consensus       166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            5432110111111100 0     0                                   000011234679999999999


Q ss_pred             HHHHhhhhCCceEEEEecCcccCCCCCCCCCcc------HHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhhcc
Q 020924          171 EALEFGKKTGLDVVTICPNLVLGPLLQSKVNTS------SLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       171 ~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      ++..++.  +++++++||++|+|+...+...++      ..++..+..|....   .|++.+|++||+|+|++++.++..
T Consensus       246 lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~  323 (491)
T PLN02996        246 LLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAA  323 (491)
T ss_pred             HHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHH
Confidence            9988754  899999999999999876543222      23334445555433   455899999999999999999875


Q ss_pred             C--C--CCceEEEe-c--ccCCHHHHHHHHHHhCCCCCCC
Q 020924          242 A--E--AEGRYICT-A--HMIRARDLVDKLKSLYPNYNYP  274 (319)
Q Consensus       242 ~--~--~~~~~~~~-~--~~~s~~e~~~~~~~~~g~~~~~  274 (319)
                      .  .  ...+||++ +  .++|+.|+++.+.+.++..++.
T Consensus       324 ~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~  363 (491)
T PLN02996        324 HAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWI  363 (491)
T ss_pred             hhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCc
Confidence            3  1  23479876 5  6899999999999988865543

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=255.20  Aligned_cols=294  Identities=22%  Similarity=0.159  Sum_probs=207.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHH--HCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh------hhHHHHhcCc
Q 020924            6 ERVCVTGAGGFLASWVVKLLL--SRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY------DSVKSAIVGC   77 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~   77 (319)
                      |+|||||||||||++++++|+  ++|++|++++|+........+.... ...+++++.+|++|+      +.+..+ +++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~   78 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW-GADRVVPLVGDLTEPGLGLSEADIAEL-GDI   78 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc-CCCcEEEEecccCCccCCcCHHHHHHh-cCC
Confidence            479999999999999999999  5899999999965432222211110 125789999999984      455555 889


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccC
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |+||||||.....   .......++|+.++.+++++|.+.++++|||+||..+++..     ..+.+|+.+..+   ..+
T Consensus        79 D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~-----~~~~~e~~~~~~---~~~  147 (657)
T PRK07201         79 DHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDY-----EGVFREDDFDEG---QGL  147 (657)
T ss_pred             CEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCc-----cCccccccchhh---cCC
Confidence            9999999975442   22356789999999999999999999999999997665432     233455543221   122


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCC------ccHHHHHHHHhcCc---cc-cCCccccccc
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVN------TSSLVLIKLLKEGY---ES-LENKLRMIVD  227 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~------~~~~~~~~~~~~~~---~~-~~~~~~~~i~  227 (319)
                      .++|+.+|..+|.++++.   .+++++++||+++||+.......      .+...+........   .. .+....+++|
T Consensus       148 ~~~Y~~sK~~~E~~~~~~---~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  224 (657)
T PRK07201        148 PTPYHRTKFEAEKLVREE---CGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVP  224 (657)
T ss_pred             CCchHHHHHHHHHHHHHc---CCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeee
Confidence            467999999999998753   48999999999999986533211      11122222211111   11 2335689999


Q ss_pred             HHHHHHHHHHhhccCCC-CceEEEec-ccCCHHHHHHHHHHhCCCCC-------CCCCC----CC---------------
Q 020924          228 VRDVAEALLLAYEKAEA-EGRYICTA-HMIRARDLVDKLKSLYPNYN-------YPKSF----TE---------------  279 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-------~~~~~----~~---------------  279 (319)
                      ++|+++++..+++.+.. +++||+++ +++|+.|+++.+.+.+|...       +|...    ..               
T Consensus       225 vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  304 (657)
T PRK07201        225 VDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQ  304 (657)
T ss_pred             HHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHh
Confidence            99999999999886554 44898775 89999999999999987432       12110    00               


Q ss_pred             --C--------CCceeechHHHHH-h---CCccccHHHHHHHHHHHHHHc
Q 020924          280 --K--------EDEVMLTSEKLQK-L---GWSYRSLEETLVDSVESYKKV  315 (319)
Q Consensus       280 --~--------~~~~~~d~~k~~~-l---g~~~~~~~~~l~~~~~~~~~~  315 (319)
                        .        .....+|++++++ |   |+.+..+.+.+..+++||.++
T Consensus       305 ~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        305 LGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVPRLASYAPRLWDYWERH  354 (657)
T ss_pred             cCCCHHHHHhccCCCeeccHHHHHHhccCCcCCCChHHHHHHHHHHHHhc
Confidence              0        0125789999988 7   566668889999999888764

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=5.6e-31  Score=227.27  Aligned_cols=265  Identities=15%  Similarity=0.189  Sum_probs=186.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      .|+|||||||||||++++++|+++|++|++..                         .|+.|.+.+...+.  ++|+|||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~~~~D~ViH   63 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDAVKPTHVFN   63 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHhcCCCEEEE
Confidence            47899999999999999999999999987532                         23344455555554  6899999


Q ss_pred             ecccCCCCC---C-CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCC--CCcccCCCCCCCcccccc
Q 020924           83 IACPAPSTT---V-PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWP--KGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        83 ~a~~~~~~~---~-~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~--~~~~~~E~~~~~~~~~~~  156 (319)
                      +||......   . .+| ..++++|+.++.+|+++|++.+++ ++++||.+.+......+  ...+++|+++..+     
T Consensus        64 ~Aa~~~~~~~~~~~~~p-~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~-----  136 (298)
T PLN02778         64 AAGVTGRPNVDWCESHK-VETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNF-----  136 (298)
T ss_pred             CCcccCCCCchhhhhCH-HHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCC-----
Confidence            999765321   1 244 789999999999999999999986 55567655443221111  1234677654332     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEAL  235 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~  235 (319)
                      +.++|+.||.++|.++..+++     ..++|++.++|+...    ....++.++..+.+.. .+   ++|+|++|+++++
T Consensus       137 ~~s~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~----~~~~fi~~~~~~~~~~~~~---~s~~yv~D~v~al  204 (298)
T PLN02778        137 TGSFYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLS----NPRNFITKITRYEKVVNIP---NSMTILDELLPIS  204 (298)
T ss_pred             CCCchHHHHHHHHHHHHHhhc-----cEEeeecccCCcccc----cHHHHHHHHHcCCCeeEcC---CCCEEHHHHHHHH
Confidence            257799999999999988753     467888877776422    1234667777666533 32   4799999999999


Q ss_pred             HHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCC-CC---CCCCC-----CCCCCceeechHHHHH-hCCccccHHHH
Q 020924          236 LLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPN-YN---YPKSF-----TEKEDEVMLTSEKLQK-LGWSYRSLEET  304 (319)
Q Consensus       236 ~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~-~~---~~~~~-----~~~~~~~~~d~~k~~~-lg~~~~~~~~~  304 (319)
                      +.+++... .++||++ +..+|+.|+++.+.+.++. +.   +....     ........+|++|+++ ++=.+...+++
T Consensus       205 ~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~  283 (298)
T PLN02778        205 IEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESL  283 (298)
T ss_pred             HHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccchHHHH
Confidence            99997643 4799875 5899999999999999983 11   11110     0011234799999998 66656677777


Q ss_pred             HHHHHHHHHH
Q 020924          305 LVDSVESYKK  314 (319)
Q Consensus       305 l~~~~~~~~~  314 (319)
                      ++...+-++.
T Consensus       284 ~~~~~~~~~~  293 (298)
T PLN02778        284 IKYVFEPNKK  293 (298)
T ss_pred             HHHHHHHHHh
Confidence            8777766643

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=100.00  E-value=2.4e-32  Score=227.45  Aligned_cols=233  Identities=21%  Similarity=0.218  Sum_probs=179.1

Q ss_pred             EEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhc--cCCCeE----EEEccCCChhhHHHHhc--Ccc
Q 020924            8 VCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEK--ASENLK----LFKADLLDYDSVKSAIV--GCN   78 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~----~~~~Dl~~~~~~~~~~~--~~d   78 (319)
                      ||||||+|.||+.||++|++.+ .++++++|++.+... ...++..  .+++++    .+.+|++|.+.+..+++  ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~-l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYE-LERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHH-HHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHH-HHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            7999999999999999999988 689999998765322 2222311  123443    45799999999999999  899


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      +|||.||....+..++.+...+++|+.||.|++++|.+++++++|++||.-++.                        |.
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~------------------------Pt  135 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN------------------------PT  135 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--------------------------
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC------------------------CC
Confidence            999999988776444455899999999999999999999999999999976543                        25


Q ss_pred             chHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAE  233 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~  233 (319)
                      +.||.||..+|.++..+....   +..++++|+|||.|..    .+.++.|..++.+|++++  .++..|=|+.++++++
T Consensus       136 nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~  211 (293)
T PF02719_consen  136 NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQ  211 (293)
T ss_dssp             SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHH
Confidence            779999999999999998765   6899999999999864    357788999999999987  5678899999999999


Q ss_pred             HHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCC
Q 020924          234 ALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYP  269 (319)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g  269 (319)
                      .++.++.....+++|+.. |.++++.|+++.+.+.+|
T Consensus       212 Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  212 LVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             HHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             HHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence            999999887777789776 799999999999999997

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.9e-31  Score=231.64  Aligned_cols=238  Identities=22%  Similarity=0.229  Sum_probs=204.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcC--c
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVG--C   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   77 (319)
                      .++|+||||||+|-||+.+|+++++.+ .++++++|++.+.....  +.+... ..++.++.+|+.|.+.++.++++  +
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcCCC
Confidence            468999999999999999999999877 67888888877542222  222111 36788999999999999999998  9


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccC
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |+|+|.||....+..+..+.+.+++|+.||.|++++|.+++++++|.+||.-++++                        
T Consensus       327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~P------------------------  382 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNP------------------------  382 (588)
T ss_pred             ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCC------------------------
Confidence            99999999888875555559999999999999999999999999999999877653                        


Q ss_pred             CchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVA  232 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a  232 (319)
                      .+.||.||..+|..+..+.++.   +..++.+|+|||.|..    .+.++.|.+++.+|++++  .++..|=|+.+.|++
T Consensus       383 tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr----GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv  458 (588)
T COG1086         383 TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR----GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAV  458 (588)
T ss_pred             chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC----CCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHH
Confidence            5679999999999999987743   3899999999999874    356788888999999888  677889999999999


Q ss_pred             HHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCC
Q 020924          233 EALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYP  269 (319)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g  269 (319)
                      +.++.+......+++|... |.++++.|+++.|.+.+|
T Consensus       459 ~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         459 QLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            9999999987777799887 799999999999999986

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.98  E-value=6.5e-30  Score=227.98  Aligned_cols=301  Identities=21%  Similarity=0.176  Sum_probs=206.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhh-HHHHHh-hhc-----c--C-CCeEEEEccCCCh------h
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEK-NARLYE-LEK-----A--S-ENLKLFKADLLDY------D   68 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~-~~~-----~--~-~~~~~~~~Dl~~~------~   68 (319)
                      +|||||||||||++++++|+++|  ++|+++.|+.+... ...+.+ +..     .  . .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  77999999876331 111111 100     0  1 4789999999753      4


Q ss_pred             hHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           69 SVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        69 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .+..+.+++|+|||+|+....   ..+.....++|+.++.+++++|.+.++++||++||.+++....    ..+..|+.+
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~----~~~~~~~~~  153 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAID----LSTVTEDDA  153 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcC----CCCcccccc
Confidence            667777889999999997653   2344667889999999999999999998999999987665432    122344433


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccccCC-cccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYESLEN-KLRM  224 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~  224 (319)
                      ..+. ...+.+.|+.+|..+|.+++.+.+. |++++++||+.++|+......   ..+..++............. ...+
T Consensus       154 ~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  231 (367)
T TIGR01746       154 IVTP-PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTED  231 (367)
T ss_pred             cccc-ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccC
Confidence            2211 1123467999999999999987765 899999999999997433221   22223333333333222222 3678


Q ss_pred             cccHHHHHHHHHHhhccCCC---CceEEEec-ccCCHHHHHHHHHHhCCCCCCC-----CCC----------CCCC----
Q 020924          225 IVDVRDVAEALLLAYEKAEA---EGRYICTA-HMIRARDLVDKLKSLYPNYNYP-----KSF----------TEKE----  281 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~-----~~~----------~~~~----  281 (319)
                      |+|++|+|++++.++.....   +++|++++ .++++.|+++.+.+ .|. +++     .+.          ....    
T Consensus       232 ~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~  309 (367)
T TIGR01746       232 LTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGY-NLKLVSFDEWLQRLEDSDTAKRDPPRYPL  309 (367)
T ss_pred             cccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCC-CCCcCCHHHHHHHHHHhhhcCCCcccccc
Confidence            99999999999999877654   45898775 89999999999998 541 111     000          0000    


Q ss_pred             ----------------CceeechHHHHH----hCCccc-cHHHHHHHHHHHHHHcCCC
Q 020924          282 ----------------DEVMLTSEKLQK----LGWSYR-SLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       282 ----------------~~~~~d~~k~~~----lg~~~~-~~~~~l~~~~~~~~~~~~~  318 (319)
                                      ....+++++.++    ++..+. --.+.+++++++++..+++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (367)
T TIGR01746       310 LPLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLLHLYLQYLKEIGFL  367 (367)
T ss_pred             hhhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence                            012456665543    465544 3456789999999998875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.8e-30  Score=205.37  Aligned_cols=297  Identities=19%  Similarity=0.176  Sum_probs=229.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-----CCCeEEEEccCCChhhHHHHhc--Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-----SENLKLFKADLLDYDSVKSAIV--GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~--~~   77 (319)
                      .|..||||-||.-|+.|++.|+.+||+|.++.|+.+.....+++.+...     +...+.+.+|++|...+..++.  .+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            3679999999999999999999999999999999887777777766543     2457889999999999999987  57


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC---EEEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK---RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~---~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                      +-|+|+|+......+.+-++.+-++...|+.+|+++.+..+..   ||-..|| +..|+..   ...|..|.+|..|   
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAst-SElyGkv---~e~PQsE~TPFyP---  180 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAST-SELYGKV---QEIPQSETTPFYP---  180 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEeccc-Hhhcccc---cCCCcccCCCCCC---
Confidence            9999999988766444444777889999999999999977532   6777776 7777765   4778899998877   


Q ss_pred             ccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCc--cccCC--cccccccH
Q 020924          155 RTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGY--ESLEN--KLRMIVDV  228 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~--~~~~~--~~~~~i~v  228 (319)
                         .+||+.+|..+-.++-.+.+.|++-.+---.++--.|.+..++  ..+.+.+.++..|..  +..|+  ..|||-|+
T Consensus       181 ---RSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372|consen  181 ---RSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             ---CChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence               8999999999988888888888876665445555555444332  233344444444443  33666  88999999


Q ss_pred             HHHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCC-CCCCCC----------------------CCCCCCcee
Q 020924          229 RDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPN-YNYPKS----------------------FTEKEDEVM  285 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~-~~~~~~----------------------~~~~~~~~~  285 (319)
                      .|.+++++.+++++.+....+.+|+..|++|+++.-....|+ +.|...                      ++.......
T Consensus       258 ~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~Lq  337 (376)
T KOG1372|consen  258 GDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQ  337 (376)
T ss_pred             HHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhc
Confidence            999999999999887655558889999999999998887762 222211                      111223477


Q ss_pred             echHHHHH-hCCccc-cHHHHHHHHHHH
Q 020924          286 LTSEKLQK-LGWSYR-SLEETLVDSVES  311 (319)
Q Consensus       286 ~d~~k~~~-lg~~~~-~~~~~l~~~~~~  311 (319)
                      .|.+|+++ |||+|+ .|.+.+++|+..
T Consensus       338 GdasKAk~~LgW~pkv~f~eLVkeMv~~  365 (376)
T KOG1372|consen  338 GDASKAKKTLGWKPKVTFPELVKEMVAS  365 (376)
T ss_pred             CChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence            89999999 999999 999999999853

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=6e-30  Score=228.39  Aligned_cols=229  Identities=16%  Similarity=0.126  Sum_probs=175.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH-HHHHhhhccCCCeEEEEccCCChhhHHHHhc----Cc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKADLLDYDSVKSAIV----GC   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~   77 (319)
                      .++++|||||||||||++++++|+++|++|++++|+...... ..........++++++.+|++|.+.+..+++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            356899999999999999999999999999999998653210 0011111113578999999999999999988    58


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccC
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |+||||++....    . ....+++|+.++.+++++|++.++++||++||.+++.+                        
T Consensus       138 D~Vi~~aa~~~~----~-~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p------------------------  188 (390)
T PLN02657        138 DVVVSCLASRTG----G-VKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP------------------------  188 (390)
T ss_pred             cEEEECCccCCC----C-CccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc------------------------
Confidence            999999875322    1 13557889999999999999999999999999654211                        


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCC--ccc-ccccHHHHHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LEN--KLR-MIVDVRDVAE  233 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~-~~i~v~D~a~  233 (319)
                      ...|..+|...|..+..  ...+++++++||+.+||+.        ..++.....+.+.. .|+  ..+ ++||++|+|+
T Consensus       189 ~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~--------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~  258 (390)
T PLN02657        189 LLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL--------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLAS  258 (390)
T ss_pred             chHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc--------HHHHHhhccCCceEEecCCcccccCceeHHHHHH
Confidence            33489999999998876  3468999999999999752        22344555666654 444  333 5799999999


Q ss_pred             HHHHhhccCCC-CceEEEec--ccCCHHHHHHHHHHhCCC
Q 020924          234 ALLLAYEKAEA-EGRYICTA--HMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       234 ~~~~~~~~~~~-~~~~~~~~--~~~s~~e~~~~~~~~~g~  270 (319)
                      ++..++.++.. +.+|++++  ..+|++|+++++.+.+|.
T Consensus       259 ~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        259 FIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             HHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCC
Confidence            99999876543 45788865  589999999999999984

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=7.1e-29  Score=200.65  Aligned_cols=273  Identities=19%  Similarity=0.260  Sum_probs=191.3

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-CcceEEEeccc
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-GCNGVFHIACP   86 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi~~a~~   86 (319)
                      |+|||||||||++|+.+|.+.||+|++++|++......           ...   .+...+.+..... ++|+|||+||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~-----------~~~---~v~~~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN-----------LHP---NVTLWEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh-----------cCc---cccccchhhhcccCCCCEEEECCCC
Confidence            68999999999999999999999999999998754211           111   1112334444554 79999999997


Q ss_pred             CCCCC-C-CCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           87 APSTT-V-PNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        87 ~~~~~-~-~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      .-... + .+......+.-+..|..|.++..+.  +.+.+|. +|+-+||+..   .+..++|+++...+.         
T Consensus        67 ~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~is-aSAvGyYG~~---~~~~~tE~~~~g~~F---------  133 (297)
T COG1090          67 PIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLIS-ASAVGYYGHS---GDRVVTEESPPGDDF---------  133 (297)
T ss_pred             ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEe-cceEEEecCC---CceeeecCCCCCCCh---------
Confidence            65442 2 2234667888899999999999855  4555666 4446677775   478899997544321         


Q ss_pred             hhHHH--HHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhc
Q 020924          163 LSKTE--AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       163 ~sK~~--~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      .++.+  =|..... ++..|.+++.+|.|.|.++.-..-..+..  .-+...|.++..|.++.+|||++|+++++.++++
T Consensus       134 la~lc~~WE~~a~~-a~~~gtRvvllRtGvVLs~~GGaL~~m~~--~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~  210 (297)
T COG1090         134 LAQLCQDWEEEALQ-AQQLGTRVVLLRTGVVLSPDGGALGKMLP--LFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLE  210 (297)
T ss_pred             HHHHHHHHHHHHhh-hhhcCceEEEEEEEEEecCCCcchhhhcc--hhhhccCCccCCCCceeeeeeHHHHHHHHHHHHh
Confidence            12221  1222222 22348999999999999975332211111  1355567778788899999999999999999999


Q ss_pred             cCCCCceEEEe-cccCCHHHHHHHHHHhCCCC---CCCCCCCC----CC-----CceeechHHHHHhCCccc--cHHHHH
Q 020924          241 KAEAEGRYICT-AHMIRARDLVDKLKSLYPNY---NYPKSFTE----KE-----DEVMLTSEKLQKLGWSYR--SLEETL  305 (319)
Q Consensus       241 ~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~---~~~~~~~~----~~-----~~~~~d~~k~~~lg~~~~--~~~~~l  305 (319)
                      +....|.||++ ..+++..++.+.+.+++...   ++|.....    ..     ...+.-..|+.+.||+++  ++++++
T Consensus       211 ~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL  290 (297)
T COG1090         211 NEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEAL  290 (297)
T ss_pred             CcCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHH
Confidence            99999999876 59999999999999999742   22222111    11     225555677777888876  999999


Q ss_pred             HHHHH
Q 020924          306 VDSVE  310 (319)
Q Consensus       306 ~~~~~  310 (319)
                      .+.+.
T Consensus       291 ~~il~  295 (297)
T COG1090         291 ADILK  295 (297)
T ss_pred             HHHHh
Confidence            98764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=6.8e-29  Score=209.22  Aligned_cols=218  Identities=23%  Similarity=0.227  Sum_probs=132.8

Q ss_pred             EeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChh-hHHHH-Hhhh----------ccCCCeEEEEccCCCh------hh
Q 020924           10 VTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDE-KNARL-YELE----------KASENLKLFKADLLDY------DS   69 (319)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~~-~~~~----------~~~~~~~~~~~Dl~~~------~~   69 (319)
                      |||||||+|++++++|++++.  +|+++.|..+.. ...++ +.+.          ....+++++.+|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999998876  999999987653 22233 1111          1147999999999874      56


Q ss_pred             HHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCC---
Q 020924           70 VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET---  146 (319)
Q Consensus        70 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~---  146 (319)
                      +..+.+++|+||||||.....   .+.....++|+.|+.++++.|.+...++|+|+|| +.+.+...    ....|.   
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~----~~~~~~~~~  152 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRP----GTIEEKVYP  152 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-T----TT--SSS-H
T ss_pred             hhccccccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCC----Ccccccccc
Confidence            667778999999999987663   4556789999999999999999777679999999 54444321    111111   


Q ss_pred             -CCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHH-HHHhcCccc-cC-
Q 020924          147 -CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLI-KLLKEGYES-LE-  219 (319)
Q Consensus       147 -~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~-~~~~~~~~~-~~-  219 (319)
                       .....+......++|..||+.+|.++++++++.|++++|+||+.|+|.......   .....++. ....+.... .+ 
T Consensus       153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  232 (249)
T PF07993_consen  153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD  232 (249)
T ss_dssp             HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred             cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence             111111222335789999999999999999887999999999999995444332   22333333 333444332 22 


Q ss_pred             -CcccccccHHHHHHHH
Q 020924          220 -NKLRMIVDVRDVAEAL  235 (319)
Q Consensus       220 -~~~~~~i~v~D~a~~~  235 (319)
                       +...|+++||.+|++|
T Consensus       233 ~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  233 PDARLDLVPVDYVARAI  249 (249)
T ss_dssp             --TT--EEEHHHHHHHH
T ss_pred             CCceEeEECHHHHHhhC
Confidence             3569999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=4.3e-27  Score=224.73  Aligned_cols=262  Identities=16%  Similarity=0.227  Sum_probs=184.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      .+|+|||||||||||++|+++|.++|++|...                         .+|++|.+.+...+.  ++|+||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------~~~l~d~~~v~~~i~~~~pd~Vi  433 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------KGRLEDRSSLLADIRNVKPTHVF  433 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------ccccccHHHHHHHHHhhCCCEEE
Confidence            34789999999999999999999999987311                         136777777877776  689999


Q ss_pred             EecccCCC---CCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCC--CCcccCCCCCCCcccccc
Q 020924           82 HIACPAPS---TTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWP--KGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        82 ~~a~~~~~---~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~--~~~~~~E~~~~~~~~~~~  156 (319)
                      |||+....   +.....+...+++|+.++.+|+++|++.++ ++|++||.+++.+....+  ...+++|+++..|     
T Consensus       434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~-----  507 (668)
T PLN02260        434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNF-----  507 (668)
T ss_pred             ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCC-----
Confidence            99997642   221223378899999999999999999998 567778866553221101  1246788764332     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc-ccCCcccccccHHHHHHHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE-SLENKLRMIVDVRDVAEAL  235 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~  235 (319)
                      +.++||.||.++|.+++.+.     ++.++|+..+||......    ..++..+++.... ..+   .+..+++|++.++
T Consensus       508 ~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~~----~nfv~~~~~~~~~~~vp---~~~~~~~~~~~~~  575 (668)
T PLN02260        508 TGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSNP----RNFITKISRYNKVVNIP---NSMTVLDELLPIS  575 (668)
T ss_pred             CCChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCCc----cHHHHHHhccceeeccC---CCceehhhHHHHH
Confidence            24789999999999998874     346777777776432211    2344444443332 132   3567888899998


Q ss_pred             HHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCC-CC---CCCCC-----CCCCCCceeechHHHHH-hCCccccHHHH
Q 020924          236 LLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYP-NY---NYPKS-----FTEKEDEVMLTSEKLQK-LGWSYRSLEET  304 (319)
Q Consensus       236 ~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g-~~---~~~~~-----~~~~~~~~~~d~~k~~~-lg~~~~~~~~~  304 (319)
                      +.+++. ..+|+||+++ ..+|+.|+++.+.+..+ .+   ++...     .+...+...+|++|+++ +|+ +.+|+++
T Consensus       576 ~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~~l~~~k~~~~~~~-~~~~~~~  653 (668)
T PLN02260        576 IEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPE-LLSIKES  653 (668)
T ss_pred             HHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccccccHHHHHHhCcc-ccchHHH
Confidence            888874 3358998875 78999999999999774 22   11100     11223445899999998 889 7799999


Q ss_pred             HHHHHH
Q 020924          305 LVDSVE  310 (319)
Q Consensus       305 l~~~~~  310 (319)
                      +.+++.
T Consensus       654 l~~~~~  659 (668)
T PLN02260        654 LIKYVF  659 (668)
T ss_pred             HHHHHh
Confidence            999875

>PRK12320 hypothetical protein; Provisional

Probab=99.95  E-value=9.4e-27  Score=216.78  Aligned_cols=239  Identities=18%  Similarity=0.205  Sum_probs=172.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|||||||||||++++++|+++|++|++++|.....          ...+++++.+|+++.. +.++++++|+|||+|+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa   69 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAGEADAVIHLAP   69 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence            4799999999999999999999999999999864321          1246789999999984 7888889999999997


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ....    .    ...+|+.++.+++++|++.++ ++||+||.+   +.+                       ..|.   
T Consensus        70 ~~~~----~----~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~---G~~-----------------------~~~~---  111 (699)
T PRK12320         70 VDTS----A----PGGVGITGLAHVANAAARAGA-RLLFVSQAA---GRP-----------------------ELYR---  111 (699)
T ss_pred             cCcc----c----hhhHHHHHHHHHHHHHHHcCC-eEEEEECCC---CCC-----------------------cccc---
Confidence            5321    1    235899999999999999998 799999852   221                       0032   


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-CCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                       ..|.++..    ++++++++|++++||+..... ...+..++.....+.       ...+||++|++++++.+++... 
T Consensus       112 -~aE~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~-------pI~vIyVdDvv~alv~al~~~~-  178 (699)
T PRK12320        112 -QAETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSAR-------PIRVLHLDDLVRFLVLALNTDR-  178 (699)
T ss_pred             -HHHHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCC-------ceEEEEHHHHHHHHHHHHhCCC-
Confidence             35665543    468999999999999864322 123333333333332       2346899999999999998643 


Q ss_pred             CceEEEe-cccCCHHHHHHHHHHhCCCCCCCCCCCCCCCceeechHHHHH-hCCccc-cHHH--HHHHH
Q 020924          245 EGRYICT-AHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQK-LGWSYR-SLEE--TLVDS  308 (319)
Q Consensus       245 ~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~--~l~~~  308 (319)
                      .++||++ ++.+|++|+++++....+...+  ..........-|.+..+. ++|.|+ .+++  .+.++
T Consensus       179 ~GiyNIG~~~~~Si~el~~~i~~~~p~~~~--~~~~~~~~~~pdi~~a~~~~~w~~~~~~~~~~~~~~~  245 (699)
T PRK12320        179 NGVVDLATPDTTNVVTAWRLLRSVDPHLRT--RRVRSWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDT  245 (699)
T ss_pred             CCEEEEeCCCeeEHHHHHHHHHHhCCCccc--cccccHHHhCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence            4689776 5999999999999887543221  122233446777888877 899998 6653  34444

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.2e-26  Score=195.67  Aligned_cols=233  Identities=18%  Similarity=0.177  Sum_probs=167.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |++|||||||+||++++++|+++|++|+++.|+....  ..+...  .+.++.++.+|++|.+++.++++       ++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~--~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL--DDLKAR--YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHh--ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999875421  122111  13478899999999998887664       479


Q ss_pred             eEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           79 GVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +||||||.......    .+.+...+++|+.++.++++++    ++.+.++||++||..+..+.+               
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------  143 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYP---------------  143 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCC---------------
Confidence            99999997644321    1123567889999999999997    455778999999965433221               


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcc---cCCCCCCCC------CccHHHHHHHHhcCcccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLV---LGPLLQSKV------NTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v---~G~~~~~~~------~~~~~~~~~~~~~~~~~~  218 (319)
                            +.+.|+.||.+.|.+++.++.+   ++++++++||+.+   ||++.....      ......+.+.+....   
T Consensus       144 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  214 (276)
T PRK06482        144 ------GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS---  214 (276)
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc---
Confidence                  1456999999999999988765   5999999999988   544322110      111112223332221   


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYP  269 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g  269 (319)
                         ..-+.+++|++++++.++..+.....|+++ +...+++|+++.+.+..+
T Consensus       215 ---~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        215 ---FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             ---CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence               122468999999999999876665678776 577788888877776653

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=3e-26  Score=195.06  Aligned_cols=223  Identities=19%  Similarity=0.181  Sum_probs=159.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|++|||||||+||++++++|+++|++|++++|+++.. ......+...+.++.++.+|++|.+.+.++++       
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA-NAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999987532 22333333334567889999999998887765       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHH----HHHHHHHH-HhCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKG----TLNVVKAC-LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~----~~~l~~~~-~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|+||||||......    ..+.++..+++|+.+    +.++++.+ ++.+.++||++||..+..+.+           
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~-----------  152 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASP-----------  152 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCC-----------
Confidence            3799999999754321    112235678899999    55666666 556778999999976544322           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhcCc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKEGY  215 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~  215 (319)
                                +.+.|+.+|.+.+.+++.++.+   .+++++++||+.++++.......        .......+.+.+  
T Consensus       153 ----------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  220 (262)
T PRK13394        153 ----------LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG--  220 (262)
T ss_pred             ----------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc--
Confidence                      1355999999999999888765   48999999999999985322100        001111122211  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                         +...++|++++|++++++.++.....  .| .|++++
T Consensus       221 ---~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        221 ---KTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             ---CCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence               23567899999999999999976432  34 456654

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.95  E-value=3e-26  Score=211.14  Aligned_cols=258  Identities=17%  Similarity=0.155  Sum_probs=178.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC---eEEEEEcCCChh-hHHHHH-hhh------------c------cCCCeEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY---FVHGTAREPSDE-KNARLY-ELE------------K------ASENLKL   59 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-~~~~~~-~~~------------~------~~~~~~~   59 (319)
                      .++|+|||||||||||++|+++|++.+.   +|+++.|..... ...++. ++.            .      ...+++.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            3579999999999999999999998653   689999975533 222221 110            0      1357899


Q ss_pred             EEccCCCh------hhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccc
Q 020924           60 FKADLLDY------DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVG  132 (319)
Q Consensus        60 ~~~Dl~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~  132 (319)
                      +.+|++++      +..+.+.+++|+|||+|+.....   .++...+++|+.++.+++++|++. ++++|||+||+++++
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~---~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG  273 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD---ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG  273 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc---cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence            99999986      45666777899999999987642   344788999999999999999887 578999999977654


Q ss_pred             cCCCCCCCcccCCCCCC----------------------C-------------------------------ccccccCCc
Q 020924          133 LNPRWPKGQIMDETCWS----------------------D-------------------------------KEYCRTTNN  159 (319)
Q Consensus       133 ~~~~~~~~~~~~E~~~~----------------------~-------------------------------~~~~~~~~~  159 (319)
                      ...     ..+.|....                      +                               +.......+
T Consensus       274 ~~~-----G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN  348 (605)
T PLN02503        274 QRQ-----GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD  348 (605)
T ss_pred             CCC-----CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC
Confidence            432     122222110                      0                               000011137


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC------CccHHHHHHHHhcCccc---cCCcccccccHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV------NTSSLVLIKLLKEGYES---LENKLRMIVDVRD  230 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D  230 (319)
                      .|..||..+|+++++...  +++++|+||+.|.+....+..      ......+....+|....   .++...|+|+||.
T Consensus       349 tYt~TK~lAE~lV~~~~~--~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~  426 (605)
T PLN02503        349 TYVFTKAMGEMVINSMRG--DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADM  426 (605)
T ss_pred             hHHHHHHHHHHHHHHhcC--CCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecH
Confidence            799999999999997653  799999999999543222211      11111122222343221   3457899999999


Q ss_pred             HHHHHHHhhcc-C----CCCceEEEe-c--ccCCHHHHHHHHHHhCCC
Q 020924          231 VAEALLLAYEK-A----EAEGRYICT-A--HMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       231 ~a~~~~~~~~~-~----~~~~~~~~~-~--~~~s~~e~~~~~~~~~g~  270 (319)
                      ++.+++.++.. .    ....+||++ +  .++++.++.+.+.+.+.+
T Consensus       427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            99999988432 1    123489885 4  799999999999987754

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.95  E-value=2e-26  Score=195.13  Aligned_cols=256  Identities=23%  Similarity=0.187  Sum_probs=177.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhh-HHHHHhhh--------ccCCCeEEEEccCC------Chhh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEK-NARLYELE--------KASENLKLFKADLL------DYDS   69 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~--------~~~~~~~~~~~Dl~------~~~~   69 (319)
                      ++||+||||||+|.+++.+|+.+- .+|+++.|-.++.. ..++....        ...++++.+.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999754 69999999777442 22222221        23578999999997      4577


Q ss_pred             HHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           70 VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        70 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      +..+.+++|.|||+|+....   ..|.......||.|+..+++.|.....|.++|+||+++.............+|.++.
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence            88888899999999998765   366688999999999999999998889999999998865433211111222233332


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccccCCcccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                      ... --...++|+.||+++|.++++.... |++++|+|||.|.|+...+..   .++.+++.-..+-+.........+.+
T Consensus       158 ~~~-~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~  235 (382)
T COG3320         158 RNV-GQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDML  235 (382)
T ss_pred             ccc-cCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhC
Confidence            211 1123578999999999999999887 999999999999998764443   34445554444444333223445555


Q ss_pred             cHHHHHHHHHHhhccC-----------CC-CceEE--EecccCCHHHHHHHHHH
Q 020924          227 DVRDVAEALLLAYEKA-----------EA-EGRYI--CTAHMIRARDLVDKLKS  266 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~-----------~~-~~~~~--~~~~~~s~~e~~~~~~~  266 (319)
                      +++++++++.......           .. -..|.  --+..+.+.++.+...+
T Consensus       236 p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         236 PVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             ccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            5554444433332221           11 12343  22688888888888877

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=5.4e-26  Score=195.83  Aligned_cols=243  Identities=15%  Similarity=0.174  Sum_probs=168.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh------cC-cce
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI------VG-CNG   79 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------~~-~d~   79 (319)
                      +|+||||||++|++++++|+++|++|++++|++++..          ..+++.+.+|+.|.+.+..++      ++ +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            4899999999999999999999999999999876421          135677889999999999998      56 999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      |+|+++....             ......+++++|++.|++|||++||.....+.                         
T Consensus        71 v~~~~~~~~~-------------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------------------  112 (285)
T TIGR03649        71 VYLVAPPIPD-------------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------------------  112 (285)
T ss_pred             EEEeCCCCCC-------------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------------------
Confidence            9998763211             02345689999999999999999985432110                         


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~  237 (319)
                         ..+...|.+++..   .+++++++||+.+++......      ....+..+..+.  .|+...+||+++|+|+++..
T Consensus       113 ---~~~~~~~~~l~~~---~gi~~tilRp~~f~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~  180 (285)
T TIGR03649       113 ---PAMGQVHAHLDSL---GGVEYTVLRPTWFMENFSEEF------HVEAIRKENKIYSATGDGKIPFVSADDIARVAYR  180 (285)
T ss_pred             ---chHHHHHHHHHhc---cCCCEEEEeccHHhhhhcccc------cccccccCCeEEecCCCCccCcccHHHHHHHHHH
Confidence               0122234433321   489999999999886532110      011111222222  46688899999999999999


Q ss_pred             hhccCCC-CceEEEec-ccCCHHHHHHHHHHhCCCCCCCCCCCC------------CC----------------Cceeec
Q 020924          238 AYEKAEA-EGRYICTA-HMIRARDLVDKLKSLYPNYNYPKSFTE------------KE----------------DEVMLT  287 (319)
Q Consensus       238 ~~~~~~~-~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~------------~~----------------~~~~~d  287 (319)
                      ++..+.. ++.|++++ +.+|+.|+++.+.+.+|. +++.....            ..                ......
T Consensus       181 ~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~-~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~  259 (285)
T TIGR03649       181 ALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR-KITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRL  259 (285)
T ss_pred             HhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC-ceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccc
Confidence            9987654 44786654 999999999999999984 22211100            00                001112


Q ss_pred             hHHHHH-hCCccccHHHHHHHHHH
Q 020924          288 SEKLQK-LGWSYRSLEETLVDSVE  310 (319)
Q Consensus       288 ~~k~~~-lg~~~~~~~~~l~~~~~  310 (319)
                      ++.+++ +|.+|++|++.+++..+
T Consensus       260 ~~~~~~~~G~~p~~~~~~~~~~~~  283 (285)
T TIGR03649       260 NDVVKAVTGSKPRGFRDFAESNKA  283 (285)
T ss_pred             cchHHHHhCcCCccHHHHHHHhhh
Confidence            445566 89999999998877643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.94  E-value=1.1e-24  Score=224.23  Aligned_cols=258  Identities=25%  Similarity=0.240  Sum_probs=181.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC----CeEEEEEcCCChhhH-HHHHhh-h-------ccCCCeEEEEccCCC-----
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD----YFVHGTAREPSDEKN-ARLYEL-E-------KASENLKLFKADLLD-----   66 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~-~~~~~~-~-------~~~~~~~~~~~Dl~~-----   66 (319)
                      .++|+|||||||||++++++|++++    ++|+++.|....... ..+... .       ....+++++.+|+++     
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999877    899999997653321 111110 0       012378999999974     


Q ss_pred             -hhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCC--------
Q 020924           67 -YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRW--------  137 (319)
Q Consensus        67 -~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~--------  137 (319)
                       .+.+..+..++|+|||+|+....   ..+.......|+.|+.+++++|++.++++++|+||.++++.....        
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~ 1127 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQ 1127 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhh
Confidence             45667777889999999997654   244455667899999999999999999999999998766432100        


Q ss_pred             CCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcC
Q 020924          138 PKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEG  214 (319)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~  214 (319)
                      .....+.|+.+..+. +..+.++|+.||+.+|.++..+.+. |++++++||++|||+......   ..+..++.....-+
T Consensus      1128 ~~~~~~~e~~~~~~~-~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~ 1205 (1389)
T TIGR03443      1128 AGGAGIPESDDLMGS-SKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG 1205 (1389)
T ss_pred             ccCCCCCcccccccc-cccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC
Confidence            001224444332221 1223567999999999999987664 899999999999998655432   12222222222222


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCCC---CceEEEec-ccCCHHHHHHHHHHh
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAEA---EGRYICTA-HMIRARDLVDKLKSL  267 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~-~~~s~~e~~~~~~~~  267 (319)
                      ....+...++|++++|+|++++.++.++..   ..+|++++ ..+++.++++.+.+.
T Consensus      1206 ~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1206 LIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             CcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            222334678999999999999999876542   23687765 689999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.3e-26  Score=193.64  Aligned_cols=238  Identities=20%  Similarity=0.126  Sum_probs=169.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+||||||+|+||++++++|+++|++|++++|+.+..  ..+...  .+..+.++.+|++|.+++.++++       
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL--ADLAEK--YGDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHh--ccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999999976532  111111  13467889999999998877664       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++.+    ++.+.+++|++||..++.+.+.           
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-----------  145 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM-----------  145 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC-----------
Confidence            4699999999764321    12234678899999998888886    4456779999999776654431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--ccHHHHHHHHhcCccccCCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--TSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                .+.|+.+|.+.+.+++.++.+   +|++++++||+.+.++.......  ............  .......
T Consensus       146 ----------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  213 (275)
T PRK08263        146 ----------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREE--LAEQWSE  213 (275)
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHH--HHHHHHh
Confidence                      455999999999988887664   58999999999998765421100  000000010000  0000123


Q ss_pred             ccc-ccHHHHHHHHHHhhccCCCCceEEEe-c-ccCCHHHHHHHHHHh
Q 020924          223 RMI-VDVRDVAEALLLAYEKAEAEGRYICT-A-HMIRARDLVDKLKSL  267 (319)
Q Consensus       223 ~~~-i~v~D~a~~~~~~~~~~~~~~~~~~~-~-~~~s~~e~~~~~~~~  267 (319)
                      +.+ ++++|++++++.+++.+...+.|+++ + ..+++.++.+.+.+.
T Consensus       214 ~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        214 RSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             ccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            445 89999999999999987766666544 3 678888998888774

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=4.8e-25  Score=186.01  Aligned_cols=220  Identities=16%  Similarity=0.160  Sum_probs=159.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+||||||||+||++++++|+++|++|+++.|+...............+.+++++.+|++|.+++..+++       
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            5668999999999999999999999999998888776543222222222234578899999999998887764       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ++|+|||+||......    ..+.+...+++|+.++.++++.+.    +.+.+++|++||...+++.+.           
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~-----------  152 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG-----------  152 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC-----------
Confidence            5799999999654322    112236678899999999999884    457789999999876654321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.++..++.+   .+++++++||+.++|+......  .......   ..    ......
T Consensus       153 ----------~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~---~~----~~~~~~  213 (249)
T PRK12825        153 ----------RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI--EEAREAK---DA----ETPLGR  213 (249)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc--chhHHhh---hc----cCCCCC
Confidence                      455999999999998877664   5899999999999998643321  1111111   00    112334


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +++++|+++++.+++.....  .| .|++++
T Consensus       214 ~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        214 SGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            89999999999999976532  34 566654

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.8e-25  Score=186.84  Aligned_cols=223  Identities=17%  Similarity=0.120  Sum_probs=157.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||+|+||++++++|+++|++|+++.|+.... ......+...+.++.++.+|++|.+++.++++       
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKC-EELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4567999999999999999999999999999999875432 12222232223467888999999999987765       


Q ss_pred             CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+|||+||........    +.+...+++|+.++.++++.+.+    .+.++||++||...+.+.+            
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~------------  154 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP------------  154 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC------------
Confidence            479999999975432211    12345679999999999988763    3556899999976554332            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCC-CCCccHHHHHHHHhcCccccCCccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQS-KVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                               ....|+.+|.+.|.+++.++.+.   |++++++|||.+.++.... .......++......    .+...+
T Consensus       155 ---------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~  221 (274)
T PRK07775        155 ---------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW----GQARHD  221 (274)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh----cccccc
Confidence                     13459999999999999887654   8999999999886553211 111111111111110    112346


Q ss_pred             ccccHHHHHHHHHHhhccCCCCceEEEe
Q 020924          224 MIVDVRDVAEALLLAYEKAEAEGRYICT  251 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~  251 (319)
                      .+++++|+|++++.+++++....+|++.
T Consensus       222 ~~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        222 YFLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             cccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            6999999999999999876544467665

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.94  E-value=6.9e-25  Score=185.41  Aligned_cols=223  Identities=18%  Similarity=0.101  Sum_probs=160.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+|+||||+|+||++++++|+++|++|++++|+..+. ......+...+..+.++.+|++|.+++..+++       
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA-AATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999999999986532 22223333333468899999999999888775       


Q ss_pred             CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEecccccc-ccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAV-GLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~-~~~~~~~~~~~~~E~  146 (319)
                      .+|+|||+++.....    ...+.+...+++|+.++.++++++.    +.+.++||++||..++ .+.+           
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~-----------  151 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYP-----------  151 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCC-----------
Confidence            579999999876542    1122235678999999999999885    3466799999997654 2211           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                ....|+.+|.+++.+++.++.+   .+++++++||+.++|+.......  ..+........      ...
T Consensus       152 ----------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~~~~~~------~~~  213 (251)
T PRK12826        152 ----------GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--AQWAEAIAAAI------PLG  213 (251)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--hHHHHHHHhcC------CCC
Confidence                      1456999999999999887654   48999999999999986433211  11111221221      233


Q ss_pred             ccccHHHHHHHHHHhhccCCC---CceEEEecccC
Q 020924          224 MIVDVRDVAEALLLAYEKAEA---EGRYICTAHMI  255 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~~~  255 (319)
                      .+++++|+|.+++.++.....   +.+|++.++..
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        214 RLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             CCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            689999999999998876432   33667665433

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-24  Score=184.74  Aligned_cols=221  Identities=19%  Similarity=0.136  Sum_probs=158.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+. ......+...+.++.++.+|++|.+++..+++       
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKL-AAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999986532 22233333334468889999999999888775       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+|||+||.......    .+.+...+++|+.++.++++++.+.    +.++||++||.....+.+            
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------  154 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP------------  154 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC------------
Confidence            37999999997543211    1223567889999999999998754    567999999965443221            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               ....|+.+|.+.+.+++.++.+   +|++++++||+.+.++....... ............      ....
T Consensus       155 ---------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~------~~~~  218 (255)
T PRK07523        155 ---------GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRT------PAGR  218 (255)
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcC------CCCC
Confidence                     1456999999999999988753   58999999999999885432111 111111121111      3456


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+++|+|+++++++.....  .| .+++++
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        219 WGKVEELVGACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            88999999999999975332  34 455554

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.7e-24  Score=185.62  Aligned_cols=221  Identities=17%  Similarity=0.160  Sum_probs=156.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      ++++|+||||+|+||++++++|+++|++|++++|+....  ..+...  ...++..+.+|++|.+++..+++       .
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~--~~l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR--ADFEAL--HPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHH--HHHHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999976532  222211  12468889999999998887765       4


Q ss_pred             cceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|+|||+||........    +.+...+++|+.++.++++++.    +.+.++||++||..++.+.+             
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~-------------  145 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP-------------  145 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC-------------
Confidence            79999999975432111    1234568999999999999864    34567999999977655432             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC----CccHHH---HHHHHhcCcccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV----NTSSLV---LIKLLKEGYESL  218 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~----~~~~~~---~~~~~~~~~~~~  218 (319)
                              +.+.|+.+|.+.|.+++.++.+   +|++++++||+.+.++......    ......   ........   .
T Consensus       146 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  214 (277)
T PRK06180        146 --------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR---E  214 (277)
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH---H
Confidence                    1456999999999998887754   5899999999999876432211    111111   11110000   0


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCCCceEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  252 (319)
                      ......+..++|+|++++.+++.+.....|.++.
T Consensus       215 ~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~  248 (277)
T PRK06180        215 AKSGKQPGDPAKAAQAILAAVESDEPPLHLLLGS  248 (277)
T ss_pred             hhccCCCCCHHHHHHHHHHHHcCCCCCeeEeccH
Confidence            0123346789999999999999876655676554

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.94  E-value=1.5e-24  Score=184.45  Aligned_cols=220  Identities=15%  Similarity=0.080  Sum_probs=153.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+++||||+|+||++++++|+++|++|++++|+..  ......++...+..+.++.+|++|.+++.++++       
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL--VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH--HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999998743  222233333333467889999999988877664       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|++|||||.....     ...+.+...+++|+.++..+++.+.    +.+.++||++||...+. ..           
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~~-----------  151 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG-IN-----------  151 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC-CC-----------
Confidence            479999999853211     1122345678899998886666555    45667999999975432 10           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCC----------CCCccHHHHHHHHhc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQS----------KVNTSSLVLIKLLKE  213 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~----------~~~~~~~~~~~~~~~  213 (319)
                                 ..+|+.+|.+.+.+++.++.++   +++++.++|+.++++....          .......+......+
T Consensus       152 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T PRK12823        152 -----------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDS  220 (260)
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhcc
Confidence                       2349999999999999887664   8999999999999974210          001112222222222


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .      ....+.+++|+|+++++++....  ..| .+++++.
T Consensus       221 ~------~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        221 S------LMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             C------CcccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            2      23446689999999999987542  233 5666553

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=8.2e-25  Score=185.12  Aligned_cols=226  Identities=13%  Similarity=0.081  Sum_probs=159.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++++||||||+|+||++++++|+++|++|++..|+...........+...+.++.++.+|+++.+++..+++     
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            567789999999999999999999999999998877654332223333333333457788899999998877765     


Q ss_pred             --CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 --GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                        .+|+|||+||........    +.+...+++|+.++.++++++.+.  ..++||++||..++.+.+            
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  149 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY------------  149 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC------------
Confidence              479999999964432111    112467899999999999999865  235899999976654322            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               +.+.|+.+|.+.|.+++.+++++  ++.+.+++|+.+.++...................     ......+
T Consensus       150 ---------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  215 (252)
T PRK06077        150 ---------GLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK-----FTLMGKI  215 (252)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh-----cCcCCCC
Confidence                     14669999999999999988765  6899999999998774321111000000111110     0123468


Q ss_pred             ccHHHHHHHHHHhhccCCC-CceEEEec
Q 020924          226 VDVRDVAEALLLAYEKAEA-EGRYICTA  252 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~-~~~~~~~~  252 (319)
                      ++++|+|++++.++..... +..|++++
T Consensus       216 ~~~~dva~~~~~~~~~~~~~g~~~~i~~  243 (252)
T PRK06077        216 LDPEEVAEFVAAILKIESITGQVFVLDS  243 (252)
T ss_pred             CCHHHHHHHHHHHhCccccCCCeEEecC
Confidence            9999999999999976544 34677664

>PRK09135 pteridine reductase; Provisional

Probab=99.94  E-value=1.8e-24  Score=182.60  Aligned_cols=222  Identities=17%  Similarity=0.152  Sum_probs=154.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      .+++++||||||+|+||++++++|+++|++|++++|+...........+... ...+.++.+|++|.+++..+++     
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3566899999999999999999999999999999987543222222222211 2357889999999999888776     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|+|||+||......    ..+.+..++++|+.++.++++++.+.   ....++++||.....+             
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  149 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERP-------------  149 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCC-------------
Confidence              4799999999644321    11224668899999999999999753   2246777665332111             


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                              ..+.+.|+.+|.++|.+++.+++++  +++++++||+.++|+.....  +..........+.+      ...
T Consensus       150 --------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~------~~~  213 (249)
T PRK09135        150 --------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS--FDEEARQAILARTP------LKR  213 (249)
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc--CCHHHHHHHHhcCC------cCC
Confidence                    1125679999999999999988764  69999999999999975432  22222223332221      223


Q ss_pred             cccHHHHHHHHHHhhccCC-C-CceEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAE-A-EGRYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~-~-~~~~~~~~  252 (319)
                      +.+++|+|+++..++.... . +.+|++++
T Consensus       214 ~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~  243 (249)
T PRK09135        214 IGTPEDIAEAVRFLLADASFITGQILAVDG  243 (249)
T ss_pred             CcCHHHHHHHHHHHcCccccccCcEEEECC
Confidence            3468999999977765432 2 33687765

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=1.2e-24  Score=183.57  Aligned_cols=221  Identities=14%  Similarity=0.141  Sum_probs=159.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG------   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   76 (319)
                      |++++++||||+|+||++++++|+++|++|+++.++...........+...+.++.++.+|++|.+++.+++++      
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999987665443322233333333345688999999999998887764      


Q ss_pred             -cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           77 -CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        77 -~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       +|+|||+||.......    .+.+...+++|+.++.++++++.+    .+.+++|++||..+..+.+.           
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  152 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG-----------  152 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC-----------
Confidence             7999999997543211    123467789999999999999975    34569999999766554321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+++.++.+   .++++++++|+.+.++....   ...........+      ...++
T Consensus       153 ----------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~------~~~~~  213 (247)
T PRK12935        153 ----------QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE---VPEEVRQKIVAK------IPKKR  213 (247)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh---ccHHHHHHHHHh------CCCCC
Confidence                      455999999999888877654   38999999999998764321   111111222221      14567


Q ss_pred             cccHHHHHHHHHHhhccCC--CCceEEEecc
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEGRYICTAH  253 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~  253 (319)
                      +.+++|++++++.+++...  .+..|++++.
T Consensus       214 ~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        214 FGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             CcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            8999999999999997542  2346777664

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-24  Score=186.23  Aligned_cols=239  Identities=20%  Similarity=0.187  Sum_probs=168.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+.+... ....++...  +.++.++.+|++|.+++..+++   
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLA-AAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT   81 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3467799999999999999999999999999999998765321 122222211  2467888999999998887765   


Q ss_pred             ----CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 ----GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                          .+|+|||+||.....     ...+.+...+++|+.++.++++++.+.    +.++||++||.....+.+       
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------  154 (276)
T PRK05875         82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR-------  154 (276)
T ss_pred             HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC-------
Confidence                579999999854321     111223567889999999999887653    345899999976543221       


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                    +.+.|+.+|.+.|.+++.++.++   +++++++||+.+.++....... ..........      .
T Consensus       155 --------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~------~  213 (276)
T PRK05875        155 --------------WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRA------C  213 (276)
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHc------C
Confidence                          14569999999999999887654   6999999999998775432111 1111111111      1


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEe-cccC----CHHHHHHHHHHhC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICT-AHMI----RARDLVDKLKSLY  268 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~-~~~~----s~~e~~~~~~~~~  268 (319)
                      .....+++++|+|+++.+++..+..  .+ .++++ |..+    ++.|+++.+.+..
T Consensus       214 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~  270 (276)
T PRK05875        214 TPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGAD  270 (276)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHH
Confidence            1345578999999999999987543  24 56665 4554    7777777776544

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5.7e-25  Score=185.65  Aligned_cols=225  Identities=17%  Similarity=0.126  Sum_probs=156.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++++++||||||+||++++++|+++|++|++++|+...........+...+.++.++.+|++|.+++..+++       
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            6678999999999999999999999999999999975432222222222223467889999999999887765       


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCCCCccc
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  153 (319)
                      ++|+|||+|+..... ..+ +...+++|+.++.++++++.+..  .+++|++||..+.+...        .+..+     
T Consensus        84 ~~d~vi~~ag~~~~~-~~~-~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--------~~~~~-----  148 (248)
T PRK07806         84 GLDALVLNASGGMES-GMD-EDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT--------VKTMP-----  148 (248)
T ss_pred             CCcEEEECCCCCCCC-CCC-cceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc--------ccCCc-----
Confidence            589999999864321 122 36788999999999999998752  34899999954332110        01110     


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccccCCcccccccHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYESLENKLRMIVDVR  229 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  229 (319)
                         ..++|+.||.++|.+++.++.+   .++++++++|+.+-++...... ......+.    ...    ....++++++
T Consensus       149 ---~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~  217 (248)
T PRK07806        149 ---EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE----ARR----EAAGKLYTVS  217 (248)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH----HHH----hhhcccCCHH
Confidence               1356999999999999988654   4899999999887665321100 00011000    000    0234789999


Q ss_pred             HHHHHHHHhhccCCCCc-eEEEecc
Q 020924          230 DVAEALLLAYEKAEAEG-RYICTAH  253 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~-~~~~~~~  253 (319)
                      |+|++++.+++.....| +|+++|.
T Consensus       218 dva~~~~~l~~~~~~~g~~~~i~~~  242 (248)
T PRK07806        218 EFAAEVARAVTAPVPSGHIEYVGGA  242 (248)
T ss_pred             HHHHHHHHHhhccccCccEEEecCc
Confidence            99999999999765555 6777764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.94  E-value=4.7e-25  Score=187.25  Aligned_cols=223  Identities=18%  Similarity=0.164  Sum_probs=157.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++++|+||||||+||++++++|+++|++|++++|+..+. .....++...+.+++++.+|++|.+++.++++       
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA-AAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999986542 22223333334578899999999999888765       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+|||+|+.......    .+.+...+++|+.++.++++.+    ++.+.++||++||...+++.+.           
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-----------  149 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG-----------  149 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC-----------
Confidence            47999999986544311    1123456788999965555555    4557789999999876654421           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhcCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKEGYE  216 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~  216 (319)
                                .+.|+.+|.+.+.+++.++.+   .+++++++||+.++++.......        ...........    
T Consensus       150 ----------~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  215 (258)
T PRK12429        150 ----------KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLL----  215 (258)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHh----
Confidence                      456999999999888877554   48999999999999876432100        00000001100    


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                       .....++|++++|+|++++.++.....  .| .|++++
T Consensus       216 -~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        216 -PLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             -ccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence             112456799999999999999876432  34 466665

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.8e-25  Score=186.99  Aligned_cols=239  Identities=14%  Similarity=0.088  Sum_probs=162.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++      
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGL-RQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999886432 22333333333467889999999999988765      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AK-VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|+||||||.......    .+.+...+++|+.++.++++++..    .+ .++||++||..++.+.+          
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~----------  151 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA----------  151 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC----------
Confidence             37999999997543211    122456789999999999998863    33 46899999977654432          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC--C
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE--N  220 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~  220 (319)
                                 +.+.|+.+|.+.+.+.+.++.+   .|+++++++|+.+.++..........  ............+  .
T Consensus       152 -----------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~  218 (275)
T PRK05876        152 -----------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRG--AACAQSSTTGSPGPLP  218 (275)
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcC--cccccccccccccccc
Confidence                       1466999999866666655443   48999999999998875332100000  0000000001112  2


Q ss_pred             cccccccHHHHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLY  268 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~  268 (319)
                      ..+++++++|+|++++.++.+.+   .|++. ......++.+.+.+..
T Consensus       219 ~~~~~~~~~dva~~~~~ai~~~~---~~~~~-~~~~~~~~~~~~~~~~  262 (275)
T PRK05876        219 LQDDNLGVDDIAQLTADAILANR---LYVLP-HAASRASIRRRFERID  262 (275)
T ss_pred             ccccCCCHHHHHHHHHHHHHcCC---eEEec-ChhhHHHHHHHHHHHH
Confidence            45678999999999999998643   44544 3344455555554443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.94  E-value=1.8e-24  Score=173.36  Aligned_cols=211  Identities=21%  Similarity=0.184  Sum_probs=157.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|.++|||||++||.+++++|.+.|++|++..|+.+...... .++..  ..+..+..|++|.++++++++       
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la-~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALA-DEIGA--GAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHH-Hhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            45689999999999999999999999999999999877422211 22211  368889999999988766553       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    ..+.|+.++++|+.|..+...+...    .+.++||++||+++.++.++           
T Consensus        81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~-----------  149 (246)
T COG4221          81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG-----------  149 (246)
T ss_pred             cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC-----------
Confidence            5899999999765531    2345789999999999999988864    35569999999988776653           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCC-CCCccHHHHHHHHhcCccccCCccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQS-KVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                .+.|+.+|.+...+.+.+..+   .+++++.+-||.+-+..... ...--...+.+...         ..
T Consensus       150 ----------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~---------~~  210 (246)
T COG4221         150 ----------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK---------GG  210 (246)
T ss_pred             ----------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc---------cC
Confidence                      566999999988888777654   48999999999985432111 11111122222222         23


Q ss_pred             ccccHHHHHHHHHHhhccCCCCc
Q 020924          224 MIVDVRDVAEALLLAYEKAEAEG  246 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~~~  246 (319)
                      ..+.++|+|+++.++++.|..-.
T Consensus       211 ~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         211 TALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             CCCCHHHHHHHHHHHHhCCCccc
Confidence            46899999999999999987644

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=187.17  Aligned_cols=229  Identities=21%  Similarity=0.180  Sum_probs=160.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+++++|||||||+||++++++|+++|++|++++|+.+.... .......  .+.+++++.+|++|.++++. ++     
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~   78 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQEN-LLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE   78 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence            456889999999999999999999999999999998654321 1111111  12468899999999988776 43     


Q ss_pred             --CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||........    +.+...+++|+.++.++++.+    ++.+.++||++||...+++.+.         
T Consensus        79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~---------  149 (280)
T PRK06914         79 IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG---------  149 (280)
T ss_pred             cCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC---------
Confidence              469999999875543111    223556789999999988886    4556779999999766554321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCC----------CccHHHHHHHHh
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKV----------NTSSLVLIKLLK  212 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~----------~~~~~~~~~~~~  212 (319)
                                  .+.|+.+|.+.+.+++.++.   .++++++++|||.++++......          ......+.....
T Consensus       150 ------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (280)
T PRK06914        150 ------------LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK  217 (280)
T ss_pred             ------------CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH
Confidence                        45699999999998888763   35899999999999887432110          001111111111


Q ss_pred             cCccccCCcccccccHHHHHHHHHHhhccCCCCceEEEe-cccCCHH
Q 020924          213 EGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICT-AHMIRAR  258 (319)
Q Consensus       213 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~  258 (319)
                      .    .....+.+++++|+|++++.+++++.....|+++ +..+++.
T Consensus       218 ~----~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        218 H----INSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             H----HhhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence            0    0113456789999999999999987665567765 4554443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.93  E-value=2.5e-25  Score=188.89  Aligned_cols=226  Identities=17%  Similarity=0.131  Sum_probs=160.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++++++||||+|+||++++++|+++|++|++++|+...... ....+   ...+.++.+|++|.+++..+++     
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARL-AALEI---GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            55677899999999999999999999999999999997653221 11222   2458889999999999888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCC-----CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAK-----VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~-----~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++||+||......    ..+.+...+++|+.++.++++++.+..     ..+||++||....++.+         
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  148 (257)
T PRK07067         78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA---------  148 (257)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC---------
Confidence              4799999999654321    122346778999999999999997542     24899999976544332         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHH---HHHHhcCcccc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVL---IKLLKEGYESL  218 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~  218 (319)
                                  +...|+.||.+.+.+++.++.+   +|+++++++|+.++|+.............   ..... .....
T Consensus       149 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~  215 (257)
T PRK07067        149 ------------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKK-RLVGE  215 (257)
T ss_pred             ------------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHH-HHHhh
Confidence                        1456999999999999887764   58999999999999975432100000000   00000 00111


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC---CceEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA---EGRYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  252 (319)
                      +.+.+++++++|+|+++.+++.....   +.++++++
T Consensus       216 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  252 (257)
T PRK07067        216 AVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDG  252 (257)
T ss_pred             cCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecC
Confidence            22567899999999999999986432   33677665

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=1.6e-24  Score=182.61  Aligned_cols=221  Identities=19%  Similarity=0.186  Sum_probs=160.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG----   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   76 (319)
                      |+|++|+|+||||+|+||++++++|+++|++|++++|++.+.. .....+...+.++.++.+|++|.+++..++++    
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAE-ALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            8888899999999999999999999999999999999865432 22233333345788999999999988877653    


Q ss_pred             ---cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           77 ---CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        77 ---~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                         +|+|||++|.......    .+.+...++.|+.++.++++++.    +.+.++||++||....++..          
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~----------  149 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP----------  149 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC----------
Confidence               5999999987544211    11235568899999999998885    45678999999976554321          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.+|.+.+.+++.++++   .+++++++||+.++|+....    +...+.......     -..
T Consensus       150 -----------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~~~-----~~~  209 (246)
T PRK05653        150 -----------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG----LPEEVKAEILKE-----IPL  209 (246)
T ss_pred             -----------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHHhc-----CCC
Confidence                       1455999999999988887654   48999999999999886432    111111111111     134


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+++++|+++++..++.....  .+ .|.++|
T Consensus       210 ~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        210 GRLGQPEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            6689999999999999975332  33 556654

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.9e-24  Score=182.83  Aligned_cols=215  Identities=17%  Similarity=0.138  Sum_probs=156.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|+++.|+.+... .....+. .+.++.++.+|++|.+++.++++     
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAE-RVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHH-HHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            8889999999999999999999999999999999999865422 2222222 23468899999999999888765     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+|||+++.......    .+.+...+++|+.++.++.+.+.    +.+.++||++||....++.+.         
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------  149 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG---------  149 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC---------
Confidence              57999999997543211    12235568899999988777664    456779999999877664421         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCC--ccHHHHHHHHhcCccccCC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVN--TSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~  220 (319)
                                  ..+|+.+|.+.+.+++.++.++   +++++++||+.++++.......  .....+.......     .
T Consensus       150 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~  212 (252)
T PRK06138        150 ------------RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR-----H  212 (252)
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc-----C
Confidence                        4559999999999999887654   8999999999999885332110  0011111111111     1


Q ss_pred             cccccccHHHHHHHHHHhhccCC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ....|++++|++++++.++.++.
T Consensus       213 ~~~~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        213 PMNRFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchh
Confidence            23348899999999999998754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=4e-24  Score=181.34  Aligned_cols=218  Identities=18%  Similarity=0.221  Sum_probs=156.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+|+||||+|+||++++++|+++|++|++++|+...........+...+.++.++.+|++|.+++..+++       .+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999999999875433223333333233568999999999988877654       579


Q ss_pred             eEEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHHHhC-----C-----CCEEEEeccccccccCCCCCCCcc
Q 020924           79 GVFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKACLEA-----K-----VKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        79 ~vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~-----~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                      +||||||.....      ...+.+...+++|+.++.++++++.+.     +     .++||++||..++++.+.      
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  156 (256)
T PRK12745         83 CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN------  156 (256)
T ss_pred             EEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC------
Confidence            999999864321      111234667899999999999988643     1     467999999876654321      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     .+.|+.+|.+.|.+++.++.+   +|++++++||+.+.++.....   .... .+.......   
T Consensus       157 ---------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~---~~~~-~~~~~~~~~---  214 (256)
T PRK12745        157 ---------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV---TAKY-DALIAKGLV---  214 (256)
T ss_pred             ---------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc---chhH-HhhhhhcCC---
Confidence                           355999999999999988764   689999999999988754321   1111 111111111   


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                       ....|.+++|+++++..++.....  .| .|++++
T Consensus       215 -~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        215 -PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             -CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence             345688999999999998865422  33 566665

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.4e-24  Score=179.85  Aligned_cols=232  Identities=18%  Similarity=0.129  Sum_probs=165.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +++++||||||+||++++++|+++|++|++++|+..... .....+.  ..+++++.+|++|.+++..+++       ++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALA-AFADALG--DARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999765321 1222221  2468899999999999887765       37


Q ss_pred             ceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           78 NGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      |+|||++|........    +.+...+++|+.++.++++++.    +.+.++||++||....... +             
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~-------------  144 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G-------------  144 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C-------------
Confidence            9999999875432111    1123456799999999998884    3456789999996433211 0             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                              ...|+.+|.+.+.+++.++.++   |++++.++|+.++++...........+.......      ...++|+
T Consensus       145 --------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~  210 (257)
T PRK07074        145 --------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW------YPLQDFA  210 (257)
T ss_pred             --------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc------CCCCCCC
Confidence                    1239999999999999887653   7999999999998875432211112222222111      2457899


Q ss_pred             cHHHHHHHHHHhhccCC--CCc-eEEEe-cccCCHHHHHHHHHHh
Q 020924          227 DVRDVAEALLLAYEKAE--AEG-RYICT-AHMIRARDLVDKLKSL  267 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~--~~~-~~~~~-~~~~s~~e~~~~~~~~  267 (319)
                      +++|++++++.++....  ..| .+++. |...+.+|+++.+.+.
T Consensus       211 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        211 TPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence            99999999999996532  235 44555 4788899999988653

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-24  Score=183.00  Aligned_cols=230  Identities=15%  Similarity=0.167  Sum_probs=163.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|+++++|||||||+||++++++|+++|++|++++|+.+..  ...+++...+.++.++.+|+++.+++..+++      
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            67789999999999999999999999999999999987643  3334443334578999999999999888775      


Q ss_pred             -CcceEEEecccCCCCCC---CCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 -GCNGVFHIACPAPSTTV---PNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                       .+|+|||+||.......   .+.+...+++|+.++.++.+.+.+.   +.++||++||..++.+.+.            
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------  149 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGG------------  149 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCC------------
Confidence             47999999996432211   1234667899999999999988642   3468999999876654321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC---ccHHHHHHHHhcCccccCCcc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN---TSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  222 (319)
                               ...|+.+|.+.+.+++.++.+   .+++++.++||.++++.......   .............+     ..
T Consensus       150 ---------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  215 (258)
T PRK08628        150 ---------TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIP-----LG  215 (258)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCC-----cc
Confidence                     455999999999999988754   48999999999999975322100   00011111111110     11


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecccCCHHH
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAHMIRARD  259 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~~s~~e  259 (319)
                      ..++.++|+|++++.++....  ..| .+.+.|....+++
T Consensus       216 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        216 HRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             ccCCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            357899999999999997642  234 4556655555444

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.1e-24  Score=180.06  Aligned_cols=219  Identities=15%  Similarity=0.117  Sum_probs=158.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|+++||||+|+||++++++|+++|++|++++|+.... ....+.+.....++.++.+|++|.+++..+++     
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA-ERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999976532 12222222223467788999999998877664     


Q ss_pred             --CcceEEEecccCCCC-------CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPST-------TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-------~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        .+|+|||+||.....       ...+.+...+++|+.++.++++++.+.    +.++||++||...+.+         
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------  151 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---------  151 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---------
Confidence              479999999975321       111223567889999999999998864    3569999999765432         


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     .+.|+.||.+.|.+++.+++++   ++++++++|+.+.++.....  ....+.....++.+    
T Consensus       152 ---------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~----  210 (250)
T PRK07774        152 ---------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--TPKEFVADMVKGIP----  210 (250)
T ss_pred             ---------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--CCHHHHHHHHhcCC----
Confidence                           2449999999999999987764   79999999999987764322  12233333333332    


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                        ...+.+++|+|++++.++....  ..+ .|++++
T Consensus       211 --~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        211 --LSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             --CCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence              2235689999999999987642  233 677664

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.93  E-value=3.9e-24  Score=180.74  Aligned_cols=229  Identities=23%  Similarity=0.270  Sum_probs=156.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC-hhhHHHHh-cCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD-YDSVKSAI-VGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~-~~~d~v   80 (319)
                      ..+|+|+||||||+||++++++|+++|++|+++.|+.+...  ..  . ..+.+++++.+|++| .+.+...+ .++|+|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~--~-~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v   89 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK--TS--L-PQDPSLQIVRADVTEGSDKLVEAIGDDSDAV   89 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH--Hh--c-ccCCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence            35689999999999999999999999999999999865321  11  1 112468999999998 46777777 689999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+++....   .++ ...+++|..++.++++++++.++++||++||..+++...    ..+..+...     ...+...
T Consensus        90 i~~~g~~~~---~~~-~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~----~~~~~~~~~-----~~~~~~~  156 (251)
T PLN00141         90 ICATGFRRS---FDP-FAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAM----GQILNPAYI-----FLNLFGL  156 (251)
T ss_pred             EECCCCCcC---CCC-CCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCc----ccccCcchh-----HHHHHHH
Confidence            999875422   122 344678999999999999999999999999976543221    111111100     0011123


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhc
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      |..+|..+|.+++.    .+++++++||+.++++......  .       ...    .......+|+++|+|++++.++.
T Consensus       157 ~~~~k~~~e~~l~~----~gi~~~iirpg~~~~~~~~~~~--~-------~~~----~~~~~~~~i~~~dvA~~~~~~~~  219 (251)
T PLN00141        157 TLVAKLQAEKYIRK----SGINYTIVRPGGLTNDPPTGNI--V-------MEP----EDTLYEGSISRDQVAEVAVEALL  219 (251)
T ss_pred             HHHHHHHHHHHHHh----cCCcEEEEECCCccCCCCCceE--E-------ECC----CCccccCcccHHHHHHHHHHHhc
Confidence            45567777776653    4899999999999976422110  0       000    00122357999999999999998


Q ss_pred             cCCCCc-eE-EEe---cccCCHHHHHHHHHH
Q 020924          241 KAEAEG-RY-ICT---AHMIRARDLVDKLKS  266 (319)
Q Consensus       241 ~~~~~~-~~-~~~---~~~~s~~e~~~~~~~  266 (319)
                      .+...+ ++ +++   +...++.++...+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        220 CPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             ChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            776533 55 333   246788888877754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=1.3e-23  Score=177.24  Aligned_cols=222  Identities=18%  Similarity=0.194  Sum_probs=159.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+++||||||+||+++++.|+++|++|+++.|+..+........+.....++.++.+|+++.+++.++++     
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            788889999999999999999999999999999988876543222333333334578889999999998887765     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+|||+||.......    .+.+...+++|+.++.++++++.+.    +.+++|++||...+++.+.         
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~---------  151 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG---------  151 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC---------
Confidence              47999999997543211    1123566889999999999988754    5568999999766655421         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+++.++++   .++++++++|+.+.++.....   ............      ..
T Consensus       152 ------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~------~~  210 (248)
T PRK05557        152 ------------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---PEDVKEAILAQI------PL  210 (248)
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---ChHHHHHHHhcC------CC
Confidence                        355999999999888877653   389999999998866543221   122222222211      23


Q ss_pred             cccccHHHHHHHHHHhhccC--CCCc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKA--EAEG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~  252 (319)
                      ..+.+++|+++++..++...  ...| .+++.+
T Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        211 GRLGQPEEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence            45789999999999988752  2234 455554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=4.9e-24  Score=180.24  Aligned_cols=223  Identities=18%  Similarity=0.161  Sum_probs=159.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+++++++|||||||+||++++++|+++|++|++++|+..... .....+.. +.++.++.+|++|.+++..+++     
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE-RVAAEILA-GGRAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            7888899999999999999999999999999999999875422 22222222 3468899999999999988765     


Q ss_pred             --CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|+|||+|+......     ..+.+...+++|+.++.++++.+.+    .+.++||++||..++++.+.        
T Consensus        79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------  150 (251)
T PRK07231         79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG--------  150 (251)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC--------
Confidence              4699999998643221     1223466889999998888887764    46679999999876654321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCC-ccHHHHHHHHhcCccccCC
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVN-TSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~  220 (319)
                                   ...|+.+|.+.+.+++.++.++   +++++.++|+.+.++....... ...........      ..
T Consensus       151 -------------~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~------~~  211 (251)
T PRK07231        151 -------------LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA------TI  211 (251)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc------CC
Confidence                         4569999999999888887653   8999999999997765332110 00011111111      11


Q ss_pred             cccccccHHHHHHHHHHhhccCCC--CceE-EEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAEA--EGRY-ICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~~--~~~~-~~~~  252 (319)
                      +...+++++|+|++++.++.....  .|.+ .+.|
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        212 PLGRLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            345688999999999999975432  3443 5544

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=4.5e-24  Score=180.91  Aligned_cols=219  Identities=18%  Similarity=0.182  Sum_probs=154.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh-------cCc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI-------VGC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~   77 (319)
                      +|++|||||||+||++++++|+++|++|++++|+.... ......+...+.++.++.+|++|.+++..++       .++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGA-EAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999986532 2222222222356889999999999776654       357


Q ss_pred             ceEEEecccCCCCCC-C---CccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           78 NGVFHIACPAPSTTV-P---NPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        78 d~vi~~a~~~~~~~~-~---~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      |+|||+|+....... .   +.+..+++.|+.++..+++.+    ++.+.+++|++||...+.+.+.             
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~-------------  146 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF-------------  146 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC-------------
Confidence            999999987543211 1   112456778999988888877    4557789999999765554321             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC----------cc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG----------YE  216 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~----------~~  216 (319)
                              ...|+.+|.+.+.+++.++.+   .+++++++||+.++|+.....       +.......          ..
T Consensus       147 --------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  211 (255)
T TIGR01963       147 --------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQ-------IADQAKTRGIPEEQVIREVM  211 (255)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHH-------HHhhhcccCCCchHHHHHHH
Confidence                    345999999999998877654   489999999999998752110       10000000          01


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ..+.+.+++++++|+|++++.++.....  .+ .|++++
T Consensus       212 ~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       212 LPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             HccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            1233567899999999999999976422  34 567765

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06182 short chain dehydrogenase; Validated

Probab=99.93  E-value=3.3e-24  Score=183.56  Aligned_cols=220  Identities=19%  Similarity=0.160  Sum_probs=152.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+++||||||+||++++++|+++|++|++++|+.++.  ..+.     ..+++++.+|++|.+++..+++       
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l--~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM--EDLA-----SLGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHH-----hCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999986532  1111     1357889999999999988775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHH----HHHhCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVK----ACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~----~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ++|+|||+||......    ..+.+...+++|+.++..+++    .+++.+.++||++||..+..+.+            
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~------------  141 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP------------  141 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC------------
Confidence            6899999999754321    112346788999998655555    55566778999999965433221            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCCC---------ccHHHHHHHHhcCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKVN---------TSSLVLIKLLKEGY  215 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~~---------~~~~~~~~~~~~~~  215 (319)
                               ....|+.+|.+.+.+++.++.   .+|++++++||+.+.++.......         ............  
T Consensus       142 ---------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  210 (273)
T PRK06182        142 ---------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAAS--  210 (273)
T ss_pred             ---------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHH--
Confidence                     134599999999998776653   358999999999998875321100         000000000000  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCCCCceEEEec
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTA  252 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  252 (319)
                      .......+.+.+++|+|++++.++........|+++.
T Consensus       211 ~~~~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~  247 (273)
T PRK06182        211 MRSTYGSGRLSDPSVIADAISKAVTARRPKTRYAVGF  247 (273)
T ss_pred             HHHhhccccCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence            0000134567899999999999998765445676553

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=9.2e-24  Score=183.10  Aligned_cols=222  Identities=14%  Similarity=0.115  Sum_probs=159.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH-HHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+.... .....+...+.++.++.+|++|.+++.++++      
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            557899999999999999999999999999988776543221 2222232234567889999999988887764      


Q ss_pred             -CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 -GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       .+|+||||||.....     ...+.+...+++|+.++.++++++.+.  ..++||++||..++.+.+.           
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  201 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT-----------  201 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC-----------
Confidence             579999999964321     112345778999999999999999864  2359999999876654321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.||.+.+.+++.++.+   +|+++++++||.+.++..... ......+..+...      ...+.
T Consensus       202 ----------~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~------~p~~r  264 (300)
T PRK06128        202 ----------LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSE------TPMKR  264 (300)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcC------CCCCC
Confidence                      345999999999999988765   489999999999999864321 1112222221111      13456


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+++|+|.++++++.....  .| .++++|
T Consensus       265 ~~~p~dva~~~~~l~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        265 PGQPVEMAPLYVLLASQESSYVTGEVFGVTG  295 (300)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence            78999999999999875432  33 566654

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-23  Score=179.67  Aligned_cols=222  Identities=14%  Similarity=0.112  Sum_probs=160.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      .+++|++|||||+|+||++++++|+++|++|++++|+...........+...+.++.++.+|++|.+.+.++++      
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46678999999999999999999999999999999976432222222332234568889999999998887764      


Q ss_pred             -CcceEEEecccCCCCC-C----CCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 -GCNGVFHIACPAPSTT-V----PNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~-~----~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       .+|+|||+|+...... .    .+.+...+++|+.++.++++++.+.  ..++||++||..++.+.+.           
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~-----------  191 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET-----------  191 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC-----------
Confidence             4799999999653211 1    1223567899999999999999764  2358999999876654431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+++.++.++   |++++.++||.++++.....  .....+.....      ....+.
T Consensus       192 ----------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~--~~~~~~~~~~~------~~~~~~  253 (290)
T PRK06701        192 ----------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD--FDEEKVSQFGS------NTPMQR  253 (290)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc--cCHHHHHHHHh------cCCcCC
Confidence                      3449999999999999888764   89999999999998754321  11122222211      114466


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+++|+|+++++++.....  .| .+.+++
T Consensus       254 ~~~~~dva~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        254 PGQPEELAPAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            89999999999999986432  34 455554

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=184.04  Aligned_cols=213  Identities=19%  Similarity=0.208  Sum_probs=155.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.|++|+|+||||||+||++++++|+++|++|++++|++... .....++...+.++.++.+|++|.++++.+++     
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERL-DEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            678889999999999999999999999999999999976532 22223333234568899999999998887664     


Q ss_pred             --CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+|||+||.....     ...+.+...+++|+.++..+++++.+.   ..++||++||.....+.+.         
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------  150 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK---------  150 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC---------
Confidence              479999999864321     112334677999999999999999753   2358999999765543321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhcC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKEG  214 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~~  214 (319)
                                  ...|+.+|.+.+.+++.++.+   .++++++++|+.++|+.......        ............ 
T Consensus       151 ------------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  217 (258)
T PRK07890        151 ------------YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN-  217 (258)
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc-
Confidence                        355999999999999988764   48999999999999985322100        001111111111 


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhcc
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                           .....+.+++|+|++++.++..
T Consensus       218 -----~~~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        218 -----SDLKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             -----CCccccCCHHHHHHHHHHHcCH
Confidence                 1334578999999999999975

>PRK06194 hypothetical protein; Provisional

Probab=99.93  E-value=5.9e-24  Score=183.39  Aligned_cols=218  Identities=14%  Similarity=0.090  Sum_probs=152.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++++||||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++       
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL-DRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            6678999999999999999999999999999999875532 22223332223468889999999999988776       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHH----HhCCC------CEEEEeccccccccCCCCCCCc
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKAC----LEAKV------KRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~----~~~~~------~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                      .+|+||||||.......    .+.+...+++|+.++.++++++    .+.+.      +++|++||.+++++.+.     
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----  157 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA-----  157 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC-----
Confidence            37999999997654311    1223556899999999988874    33333      58999999877654321     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC-----CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-----GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (319)
                                      .++|+.+|.+.+.+++.++.++     ++++..+.|+.+.++....            ..+.+.
T Consensus       158 ----------------~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~------------~~~~~~  209 (287)
T PRK06194        158 ----------------MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS------------ERNRPA  209 (287)
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc------------cccCch
Confidence                            4559999999999999887653     4777888888776553221            111111


Q ss_pred             c---cCCcccccccHHHHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhC
Q 020924          217 S---LENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLY  268 (319)
Q Consensus       217 ~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~  268 (319)
                      .   .+.+.++|++++|.+..+....              .++..|+++.+.+..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~  250 (287)
T PRK06194        210 DLANTAPPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAI  250 (287)
T ss_pred             hcccCccccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHH
Confidence            1   2336677777777766643221              156777777776654

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.9e-23  Score=176.96  Aligned_cols=221  Identities=19%  Similarity=0.173  Sum_probs=155.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-EcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGT-AREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |++++|+||||||+||++++++|+++|++|+++ .|+..+ .......+...+..+.++.+|++|.+++..+++      
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQA-ADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999875 455432 222223332223468889999999999887765      


Q ss_pred             -------CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 -------GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 -------~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                             ++|+|||+||........    +.+...+++|+.++.++++++.+.  ..+++|++||..++.+.+       
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~-------  155 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT-------  155 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC-------
Confidence                   479999999975443211    123556789999999999999864  345899999976654332       


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                    +...|+.+|.+.+.+++.++++   +++++++++|+.++++.......  ...+.......     
T Consensus       156 --------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~~~~~~~~-----  214 (254)
T PRK12746        156 --------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD--DPEIRNFATNS-----  214 (254)
T ss_pred             --------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc--ChhHHHHHHhc-----
Confidence                          1455999999999998887664   57999999999998875422100  01111111111     


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC---CceEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA---EGRYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  252 (319)
                      .....+++++|+|+++..++.....   +..|++++
T Consensus       215 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        215 SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            1335678999999999988876432   33676654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.93  E-value=1.4e-23  Score=177.15  Aligned_cols=211  Identities=16%  Similarity=0.113  Sum_probs=153.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+|+||||+|+||++++++|+++|++|++++|+........+.   ..+.++.++.+|+++.+++..+++     
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE---ALGRRFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999999865322222222   223568899999999998887664     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++||+||.......    .+.+...+++|+.++.++++++.+.    + .+++|++||...+.+.+.        
T Consensus        78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------  149 (248)
T TIGR01832        78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--------  149 (248)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC--------
Confidence              48999999997543211    1234567899999999999988642    3 469999999776543321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.+|.+.+.+++.+++++   |++++.++||.+.++....... ...........  .    .
T Consensus       150 -------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~--~----~  209 (248)
T TIGR01832       150 -------------VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-DEDRNAAILER--I----P  209 (248)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-ChHHHHHHHhc--C----C
Confidence                         3449999999999999887763   8999999999998875321110 01111111111  1    3


Q ss_pred             ccccccHHHHHHHHHHhhccC
Q 020924          222 LRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+.|++++|+|+++++++...
T Consensus       210 ~~~~~~~~dva~~~~~l~s~~  230 (248)
T TIGR01832       210 AGRWGTPDDIGGPAVFLASSA  230 (248)
T ss_pred             CCCCcCHHHHHHHHHHHcCcc
Confidence            457899999999999999753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.93  E-value=1.1e-23  Score=177.96  Aligned_cols=222  Identities=18%  Similarity=0.196  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ++++++|||||||+||++++++|+++|++|++++|+.+... .....+...+.++.++.+|++|.++++++++       
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAE-KVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999998765322 1222222234568899999999998888765       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++||+++.......    .+.+...+++|+.++.++++++.    +.+.+++|++||..++++.+.           
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~-----------  148 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG-----------  148 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC-----------
Confidence            47999999986433211    11235578999999999988876    456679999999877654421           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccccCCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                ...|+.+|.+.+.+++.++++.   +++++++||+.++++......   ..............      .
T Consensus       149 ----------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  212 (250)
T TIGR03206       149 ----------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAI------P  212 (250)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcC------C
Confidence                      3459999999999888887653   899999999999987432110   01111122222211      2


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...+..++|+|+++..++.....  .| .+.+++
T Consensus       213 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       213 LGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             ccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence            33467899999999999876432  34 455554

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=1.9e-23  Score=176.50  Aligned_cols=221  Identities=16%  Similarity=0.103  Sum_probs=154.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-EcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGT-AREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |.+++++||||||+||++++++|+++|++|+++ .|+... .....++++..+.++.++.+|++|++++..+++      
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA-AEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999998774 555432 222333333334568899999999999888775      


Q ss_pred             -CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+|||+||........    +.+...+++|+.++.++++++.+.    +.++||++||.....+.+           
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  149 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE-----------  149 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----------
Confidence             479999999865432111    122446789999999999998753    456999999976544321           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++....... ............      ...
T Consensus       150 ----------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~  212 (250)
T PRK08063        150 ----------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN-REELLEDARAKT------PAG  212 (250)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC-chHHHHHHhcCC------CCC
Confidence                      1455999999999999988654   58999999999998765322111 111111111111      233


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      .+++++|+|++++.++..+..  .| .+++.+
T Consensus       213 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        213 RMVEPEDVANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            579999999999999976432  34 456554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.92  E-value=7.5e-24  Score=170.46  Aligned_cols=183  Identities=32%  Similarity=0.396  Sum_probs=140.2

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecccC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPA   87 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   87 (319)
                      |+|+||||++|++++++|+++|++|+++.|++.+...         ..+++++.+|+.|.+.+.++++++|+|||+++..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence            7999999999999999999999999999999774321         3689999999999999999999999999999653


Q ss_pred             CCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHH
Q 020924           88 PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE  167 (319)
Q Consensus        88 ~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~  167 (319)
                      ..             +...+.++++++++.+++++|++||...+...+    .....+..+        ....|...|..
T Consensus        72 ~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~----~~~~~~~~~--------~~~~~~~~~~~  126 (183)
T PF13460_consen   72 PK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPP----GLFSDEDKP--------IFPEYARDKRE  126 (183)
T ss_dssp             TT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCT----SEEEGGTCG--------GGHHHHHHHHH
T ss_pred             cc-------------cccccccccccccccccccceeeeccccCCCCC----ccccccccc--------chhhhHHHHHH
Confidence            22             277889999999999999999999976544322    111111110        01458889988


Q ss_pred             HHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          168 AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       168 ~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      .|+.+..    .+++++++||+.+||+..... .....            .+....++|+++|+|++++.++++
T Consensus       127 ~e~~~~~----~~~~~~ivrp~~~~~~~~~~~-~~~~~------------~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  127 AEEALRE----SGLNWTIVRPGWIYGNPSRSY-RLIKE------------GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHHHH----STSEEEEEEESEEEBTTSSSE-EEESS------------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHHHh----cCCCEEEEECcEeEeCCCcce-eEEec------------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            8877753    489999999999999864311 11100            223556899999999999998863

...

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=179.90  Aligned_cols=217  Identities=18%  Similarity=0.166  Sum_probs=154.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-------   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   76 (319)
                      ++++|+||||||+||++++++|+++|++|++++|+.....         ...+++++.+|++|.++++.++++       
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA---------PIPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999764321         124678999999999999888763       


Q ss_pred             cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|+||||||.......    .+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+.            
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  141 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY------------  141 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC------------
Confidence            6999999997543211    1234678899999999999886    4557789999999766543321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC---ccHHHHHHHHhcCccccCCcc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN---TSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  222 (319)
                               ...|+.+|.+.+.+++.++.+   +|+++++++|+.+.++.......   ..... ...............
T Consensus       142 ---------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  211 (270)
T PRK06179        142 ---------MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERAVVSKAVAKAV  211 (270)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHHHHHHHHHhcc
Confidence                     456999999999988887554   59999999999998875432210   11100 000000000000122


Q ss_pred             cccccHHHHHHHHHHhhccCCCCceEEEe
Q 020924          223 RMIVDVRDVAEALLLAYEKAEAEGRYICT  251 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  251 (319)
                      .....++|+|+.++.++..+.....|..+
T Consensus       212 ~~~~~~~~va~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        212 KKADAPEVVADTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             ccCCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence            33568899999999999876544566553

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=8.1e-24  Score=171.16  Aligned_cols=228  Identities=22%  Similarity=0.186  Sum_probs=176.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+-.+-|.|||||+|+.+|.+|.+.|-+|++-.|..+.. ...++ .-+...++-+...|+.|++++.++.+...+|||+
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~-~r~lk-vmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD-PRHLK-VMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc-hhhee-ecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            345678999999999999999999999999999976532 11111 1122357888999999999999999999999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      .|..-.   ... ..+.++|+.+..+|+..|++.|+.|||++|+-.+-..                       ..+-|-.
T Consensus       138 IGrd~e---Tkn-f~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~-----------------------s~Sr~Lr  190 (391)
T KOG2865|consen  138 IGRDYE---TKN-FSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVK-----------------------SPSRMLR  190 (391)
T ss_pred             eccccc---cCC-cccccccchHHHHHHHHHHhhChhheeehhhcccccc-----------------------ChHHHHH
Confidence            986433   233 5788999999999999999999999999998432110                       1355999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCC-cccccccHHHHHHHHHHhh
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LEN-KLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~i~v~D~a~~~~~~~  239 (319)
                      +|.++|..+++...    ..+|+||+.+||..+.    ++..+.....+-....   .|. .....|+|-|+|.+|+.++
T Consensus       191 sK~~gE~aVrdafP----eAtIirPa~iyG~eDr----fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAv  262 (391)
T KOG2865|consen  191 SKAAGEEAVRDAFP----EATIIRPADIYGTEDR----FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAV  262 (391)
T ss_pred             hhhhhHHHHHhhCC----cceeechhhhcccchh----HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhc
Confidence            99999999999754    4699999999998653    3333333333222222   232 6788999999999999999


Q ss_pred             ccCCCCc-eE-EEecccCCHHHHHHHHHHhC
Q 020924          240 EKAEAEG-RY-ICTAHMIRARDLVDKLKSLY  268 (319)
Q Consensus       240 ~~~~~~~-~~-~~~~~~~s~~e~~~~~~~~~  268 (319)
                      +.+...| +| .++....++.|+++.|.+..
T Consensus       263 kDp~s~Gktye~vGP~~yql~eLvd~my~~~  293 (391)
T KOG2865|consen  263 KDPDSMGKTYEFVGPDRYQLSELVDIMYDMA  293 (391)
T ss_pred             cCccccCceeeecCCchhhHHHHHHHHHHHH
Confidence            9988766 78 56669999999999998764

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.4e-23  Score=173.23  Aligned_cols=223  Identities=18%  Similarity=0.173  Sum_probs=158.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+.++++++||||+|+||++++++|+++|++|+++.|+.........+.+...+.++.++.+|+++.+++.++++     
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            777889999999999999999999999999998888765432222333333334578899999999999888776     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                        ++|+|||+||......    ..+.+...+++|+.++.++++++.+.  ..++||++||.....+.+            
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------  148 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP------------  148 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC------------
Confidence              5899999999654221    11224567889999999999998764  235899999965443322            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               +.+.|+.+|.+.+.+++.++.+   .++++++++|+.+.++.....  .....+.......      ....
T Consensus       149 ---------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~------~~~~  211 (245)
T PRK12937        149 ---------GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLA------PLER  211 (245)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcC------CCCC
Confidence                     1456999999999999888655   379999999999877642111  1122223322222      2334


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+++|+++++++++.....  .| .+++++
T Consensus       212 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        212 LGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             CCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence            66899999999999975432  34 345543

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.5e-23  Score=174.71  Aligned_cols=220  Identities=15%  Similarity=0.129  Sum_probs=153.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      ++++|||||||+||++++++|+++|++|++..++...........+...+.++.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999988776544322222223333233467889999999998888775       57


Q ss_pred             ceEEEecccCCCCC-C----CCccchhhhhHHHHHHHHHHHHHhCC-------CCEEEEeccccccccCCCCCCCcccCC
Q 020924           78 NGVFHIACPAPSTT-V----PNPQMELLEPAVKGTLNVVKACLEAK-------VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        78 d~vi~~a~~~~~~~-~----~~~~~~~~~~Nv~~~~~l~~~~~~~~-------~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      |+|||+|+...... .    .+.+...+++|+.++.++++++.+..       -+++|++||..++++.+.         
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------  152 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---------  152 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------
Confidence            99999999754321 1    12235679999999999998887531       237999999877665421         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 ....|+.+|.+.+.+++.++.+.   +++++++||+.++|+.....  .....+.......      ..
T Consensus       153 -----------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--~~~~~~~~~~~~~------p~  213 (248)
T PRK06123        153 -----------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--GEPGRVDRVKAGI------PM  213 (248)
T ss_pred             -----------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc--CCHHHHHHHHhcC------CC
Confidence                       01349999999999999887653   89999999999999854321  1122222222222      22


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..+.+++|+++++++++....  ..| .|++.+
T Consensus       214 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        214 GRGGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            334589999999999987542  233 565554

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=4e-23  Score=187.25  Aligned_cols=231  Identities=19%  Similarity=0.127  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-------c--cCCCeEEEEccCCChhhHHHH
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-------K--ASENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~--~~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      +++++||||||+|+||++++++|+++|++|++++|+...... ....+.       .  ...+++++.+|++|.+++.++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~-l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAES-LVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            356899999999999999999999999999999998764321 111110       0  113588999999999999999


Q ss_pred             hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccc
Q 020924           74 IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  153 (319)
                      +.++|+|||++|.....  ...+...+++|+.++.+++++|++.+++|||++||.++....  .+      +.. .    
T Consensus       157 LggiDiVVn~AG~~~~~--v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g--~p------~~~-~----  221 (576)
T PLN03209        157 LGNASVVICCIGASEKE--VFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG--FP------AAI-L----  221 (576)
T ss_pred             hcCCCEEEEcccccccc--ccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC--cc------ccc-h----
Confidence            99999999999864321  112356788999999999999999999999999997542110  00      000 0    


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC-cccccccHHHHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN-KLRMIVDVRDVA  232 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a  232 (319)
                        .....|...|..+|..+..    .|+++++||||.++++.......   ..+       ....++ .....+..+|+|
T Consensus       222 --~sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~t---~~v-------~~~~~d~~~gr~isreDVA  285 (576)
T PLN03209        222 --NLFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET---HNL-------TLSEEDTLFGGQVSNLQVA  285 (576)
T ss_pred             --hhHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccccccc---cce-------eeccccccCCCccCHHHHH
Confidence              1134577788888877754    58999999999998774321100   000       000111 233468999999


Q ss_pred             HHHHHhhccCCC-Cc-eE-EEecccCCHHHHHHHHH
Q 020924          233 EALLLAYEKAEA-EG-RY-ICTAHMIRARDLVDKLK  265 (319)
Q Consensus       233 ~~~~~~~~~~~~-~~-~~-~~~~~~~s~~e~~~~~~  265 (319)
                      +++++++.++.. .+ ++ ++++.......+.+.+.
T Consensus       286 ~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~  321 (576)
T PLN03209        286 ELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLA  321 (576)
T ss_pred             HHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHH
Confidence            999999986653 23 66 44443333344444443

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.7e-23  Score=173.62  Aligned_cols=215  Identities=14%  Similarity=0.120  Sum_probs=154.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+.+.......+.+...+.++.++.+|++|.+++.++++     
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999976533233333443334568889999999998887765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||......    ..+.+...+++|+.++..+++++.+    .+.++||++||.+.+.+.+..        
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------  155 (254)
T PRK06114         84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL--------  155 (254)
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC--------
Confidence              3699999999754321    1223467789999999888777653    455699999997765543210        


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.+|.+.+.+++.++.+   +|+++++++||.+.++..... .. ...........      +.
T Consensus       156 -----------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~-~~~~~~~~~~~------p~  216 (254)
T PRK06114        156 -----------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EM-VHQTKLFEEQT------PM  216 (254)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cc-hHHHHHHHhcC------CC
Confidence                       1345999999999998888764   489999999999988754321 11 11111111111      23


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+..++|++.++++++...
T Consensus       217 ~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        217 QRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            45678999999999998753

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.9e-23  Score=173.97  Aligned_cols=223  Identities=16%  Similarity=0.099  Sum_probs=156.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ..+|++|||||+|+||++++++|+++|++|+++.++..+........+...+.++.++.+|++|.+++.++++       
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3467999999999999999999999999999887754332222223332234568889999999998888765       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++++.+.    ..+++|++||...+.+.+            
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p------------  154 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP------------  154 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC------------
Confidence            3799999998654321    12234678899999999999998764    235889988854433221            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ....|+.+|.+.|.+.+.+++++  +++++.++||.+.+....    .... +.......      .....
T Consensus       155 ---------~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~----~~~~-~~~~~~~~------~~~~~  214 (258)
T PRK09134        155 ---------DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ----SPED-FARQHAAT------PLGRG  214 (258)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc----ChHH-HHHHHhcC------CCCCC
Confidence                     13459999999999999987754  489999999998765321    1111 12222221      12235


Q ss_pred             ccHHHHHHHHHHhhccCCCCc-eEEEec-ccCCH
Q 020924          226 VDVRDVAEALLLAYEKAEAEG-RYICTA-HMIRA  257 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~~~-~~~~~~-~~~s~  257 (319)
                      .+++|+|++++.+++.+...| .+.+++ ..+++
T Consensus       215 ~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        215 STPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             cCHHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence            789999999999998766656 455554 44443

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6e-23  Score=173.35  Aligned_cols=208  Identities=19%  Similarity=0.205  Sum_probs=152.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh---hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE---KNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +++|+++||||+|+||++++++|+++|++|+++.|.....   ......++...+.++.++.+|++|.+++..+++    
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999987743321   111222333334578899999999998888764    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH-----hCCCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL-----EAKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~-----~~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         ++|+|||+||......    ..+.+...+++|+.++.++++++.     +.+.+++|++||...+++.+.       
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  156 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG-------  156 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC-------
Confidence               5799999999765321    112235678999999999999998     456679999999877654321       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.+|.+.+.+++.++.+   .+++++++||+.+.++.....  ...   .......      
T Consensus       157 --------------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~--~~~---~~~~~~~------  211 (249)
T PRK12827        157 --------------QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA--APT---EHLLNPV------  211 (249)
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc--chH---HHHHhhC------
Confidence                          345999999999988887664   389999999999999864322  111   1111111      


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+.+++|+|++++.++...
T Consensus       212 ~~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        212 PVQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             CCcCCcCHHHHHHHHHHHcCcc
Confidence            2223568999999999998653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.92  E-value=1.9e-23  Score=176.74  Aligned_cols=210  Identities=16%  Similarity=0.088  Sum_probs=151.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG----   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   76 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+..       .   ..+.++.++.+|++|.+++.+++++    
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~-------~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL-------T---QEDYPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh-------h---hcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4567799999999999999999999999999999998751       1   1134688999999999999887753    


Q ss_pred             ---cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           77 ---CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        77 ---~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                         +|+|||+++......    ..+.+...+++|+.++.++++++..    .+.++||++||.....+.+          
T Consensus        74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------  143 (252)
T PRK08220         74 TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRI----------  143 (252)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCC----------
Confidence               799999999754321    1123466789999999999999864    3456899999975543321          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhc--CccccCC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKE--GYESLEN  220 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~  220 (319)
                                 +.+.|+.+|.+.+.+++.++.+   +++++++++|+.++++........ .........+  .......
T Consensus       144 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  211 (252)
T PRK08220        144 -----------GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVD-EDGEQQVIAGFPEQFKLGI  211 (252)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccc-hhhhhhhhhhHHHHHhhcC
Confidence                       1456999999999999888765   689999999999999853211000 0000000000  0000112


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+++++|+|+++++++...
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        212 PLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             CCcccCCHHHHHHHHHHHhcch
Confidence            4567899999999999999754

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.8e-23  Score=176.15  Aligned_cols=220  Identities=20%  Similarity=0.187  Sum_probs=153.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+... .......  ..++.++.+|++|.+++..+++       
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALA-ATAARLP--GAKVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHh--cCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56799999999999999999999999999999999765321 1111111  1256889999999998887764       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHh----CCC-CEEEEeccccccccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLE----AKV-KRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~-~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      ++|+|||+||.....     ...+.+...+++|+.++.++++++.+    .+. ++++++||.....+.+.         
T Consensus        86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~---------  156 (264)
T PRK12829         86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG---------  156 (264)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC---------
Confidence            579999999976221     11122467789999999999998853    344 57888888665443321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhcC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKEG  214 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~~  214 (319)
                                  ...|+.+|.+.|.+++.++.+   .+++++++||+.++|+.......        ...........  
T Consensus       157 ------------~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  222 (264)
T PRK12829        157 ------------RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLE--  222 (264)
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHh--
Confidence                        345999999999999888764   38999999999999986422100        00000001110  


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                          ....+.+++++|+|+++..++....  ..| .|++++
T Consensus       223 ----~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        223 ----KISLGRMVEPEDIAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             ----cCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence                0134568999999999998886432  233 566665

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=8e-23  Score=173.69  Aligned_cols=225  Identities=16%  Similarity=0.072  Sum_probs=154.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc-------
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +|+|+||||+|+||++++++|+++|++|++++|+..... .....+...  +.++.++.+|++|.+++..+++       
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAA-NVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999998765322 122222111  1358899999999988887664       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AK-VKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|+|||+||.......    .+.+...+++|+.++.++++++.+    .+ -.++|++||..+.++.+           
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-----------  149 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK-----------  149 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------
Confidence            47999999986543211    122356779999998888887764    34 35999999976544332           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCCCccHHHHHHHH--hcCc---ccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL--KEGY---ESL  218 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~--~~~~---~~~  218 (319)
                                ...+|+.+|.+.+.+++.++.   .+|++++++|||.++++....  ..+..+.....  .+..   ...
T Consensus       150 ----------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  217 (259)
T PRK12384        150 ----------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKLGIKPDEVEQYYID  217 (259)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhcCCChHHHHHHHHH
Confidence                      135599999999988888764   369999999999987654221  11111111100  0000   001


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +...+++++++|++++++.++.....  .| .|++++.
T Consensus       218 ~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        218 KVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             hCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            22567899999999999999875432  33 5777654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7e-23  Score=172.98  Aligned_cols=210  Identities=21%  Similarity=0.161  Sum_probs=150.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      .|++|+|+||||+|+||++++++|+++|++|++++|+.... .....++   +.++.++.+|++|.+++..+++      
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASL-EAARAEL---GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHH-HHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            36678999999999999999999999999999999875422 1122222   3467889999999887766543      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                       .+|+|||+||......    ..+.+...+++|+.++.++++++.+.  ...++|++||....++.+.            
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~------------  146 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN------------  146 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC------------
Confidence             5799999998654321    11234678999999999999999853  3358888888766554321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccccCCcc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                               .+.|+.+|.+.|.+++.++.+   .+++++++||+.++++.....   ......+........      ..
T Consensus       147 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~------~~  211 (249)
T PRK06500        147 ---------SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALV------PL  211 (249)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcC------CC
Confidence                     456999999999999887654   389999999999998753211   111122222222222      22


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+..++|+|+++++++...
T Consensus       212 ~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        212 GRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            33568999999999998754

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8e-23  Score=172.22  Aligned_cols=216  Identities=20%  Similarity=0.225  Sum_probs=155.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Ccce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   79 (319)
                      |++++++||||+|+||+++++.|+++|++|++++|+.++.  ..+.+.    .+..++.+|+++.+.+..+++   .+|+
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~--~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~d~   80 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL--DRLAGE----TGCEPLRLDVGDDAAIRAALAAAGAFDG   80 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHH----hCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence            5568999999999999999999999999999999976432  122111    135678899999988888776   4899


Q ss_pred             EEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           80 VFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        80 vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      |||+||......    ..+.+...+.+|+.++.++++++.+.    + .++||++||...+++.+.              
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  146 (245)
T PRK07060         81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD--------------  146 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC--------------
Confidence            999999754321    11234566789999999999988753    2 368999999776654321              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                             ...|+.+|.+.|.+++.++.+   .+++++.+||+.++++........ ..........      ...+.|++
T Consensus       147 -------~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~  212 (245)
T PRK07060        147 -------HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAA------IPLGRFAE  212 (245)
T ss_pred             -------CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhc------CCCCCCCC
Confidence                   345999999999999988765   479999999999998864321111 1111111111      13456899


Q ss_pred             HHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          228 VRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ++|+|++++.++..+..  .| .+++++
T Consensus       213 ~~d~a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK07060        213 VDDVAAPILFLLSDAASMVSGVSLPVDG  240 (245)
T ss_pred             HHHHHHHHHHHcCcccCCccCcEEeECC
Confidence            99999999999986532  34 445554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=8.3e-23  Score=173.08  Aligned_cols=213  Identities=12%  Similarity=0.045  Sum_probs=154.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++.+|++|||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++     
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERA-ELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999986532 22223333333467888999999998887764     


Q ss_pred             --CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+|||+||.....    ...+.+...+++|+.++..+++++.+    .+.++||++||.....+.+.         
T Consensus        84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  154 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT---------  154 (254)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC---------
Confidence              379999999964322    11233466899999999999988865    34569999999765443321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+++.++.+   +|++++.++||.+.++....... ...+.......      ...
T Consensus       155 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~------~p~  215 (254)
T PRK08085        155 ------------ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKR------TPA  215 (254)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhc------CCC
Confidence                        345999999999999988765   48999999999998875432111 11111111111      134


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+..++|++.++++++...
T Consensus       216 ~~~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        216 ARWGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             CCCcCHHHHHHHHHHHhCcc
Confidence            56789999999999999753

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9.5e-23  Score=172.26  Aligned_cols=210  Identities=23%  Similarity=0.201  Sum_probs=153.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+++||||+|+||++++++|+++|++|++++|++++.. .....+...+.++.++.+|++|.+++.++++       
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEAR-ELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            55799999999999999999999999999999988765322 2223333334568999999999999887764       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ++|+|||++|......    ..+.+...+++|+.++.++++++.+.    +.+++|++||...+.+.+.           
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  152 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK-----------  152 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC-----------
Confidence            5899999999754321    11223566889999999999998653    3459999999766544321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++.......  ..+......+      ...+.
T Consensus       153 ----------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~------~~~~~  214 (250)
T PRK12939        153 ----------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKG------RALER  214 (250)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhc------CCCCC
Confidence                      345999999999999887654   48999999999998775322110  1122222211      24556


Q ss_pred             cccHHHHHHHHHHhhccC
Q 020924          225 IVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~  242 (319)
                      +++++|+|++++.++...
T Consensus       215 ~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        215 LQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             CCCHHHHHHHHHHHhCcc
Confidence            899999999999999764

>PRK07985 oxidoreductase; Provisional

Probab=99.91  E-value=9.6e-23  Score=176.03  Aligned_cols=213  Identities=14%  Similarity=0.105  Sum_probs=152.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHh-hhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYE-LEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++|+++||||+|+||++++++|+++|++|+++.|+........+.+ +...+.++.++.+|++|.+++..+++      
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999998877644322222222 22223467889999999988877654      


Q ss_pred             -CcceEEEecccCCC-----CCCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 -GCNGVFHIACPAPS-----TTVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       .+|++||+||....     ....+.+...+++|+.++.++++++.+.  .-++||++||..++.+.+.           
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~-----------  195 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH-----------  195 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC-----------
Confidence             47999999986421     1112335778999999999999999764  2258999999876654321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+++.++.+   +|++++.++|+.+.++..... ..............      ..+.
T Consensus       196 ----------~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~------~~~r  258 (294)
T PRK07985        196 ----------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG-GQTQDKIPQFGQQT------PMKR  258 (294)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc-CCCHHHHHHHhccC------CCCC
Confidence                      345999999999999888765   489999999999999863211 11111111211111      2345


Q ss_pred             cccHHHHHHHHHHhhccCC
Q 020924          225 IVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~  243 (319)
                      +..++|+|+++++++....
T Consensus       259 ~~~pedva~~~~fL~s~~~  277 (294)
T PRK07985        259 AGQPAELAPVYVYLASQES  277 (294)
T ss_pred             CCCHHHHHHHHHhhhChhc
Confidence            7789999999999997543

>PLN02253 xanthoxin dehydrogenase

Probab=99.91  E-value=1.1e-22  Score=174.83  Aligned_cols=223  Identities=17%  Similarity=0.111  Sum_probs=154.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+.... ......+. ...++.++.+|++|.+++.++++       
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG-QNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5678999999999999999999999999999999875432 11222221 13468899999999999988775       


Q ss_pred             CcceEEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      .+|+||||||.....      ...+.+..++++|+.++.++++++.+.    +.+++|++||..+..+.+.         
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---------  164 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG---------  164 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC---------
Confidence            589999999975321      111224678999999999999988643    3458999999776554321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCC---CccHHHHH---HHHhcCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKV---NTSSLVLI---KLLKEGYE  216 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~---~~~~~~~~  216 (319)
                                  ...|+.+|.+.|.+++.++.++   ++++..++|+.+.++......   ......+.   ........
T Consensus       165 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
T PLN02253        165 ------------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN  232 (280)
T ss_pred             ------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC
Confidence                        2359999999999999887653   899999999999876432110   00001111   11111000


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                          .....++++|+|+++++++.....  .| .+.++|
T Consensus       233 ----l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        233 ----LKGVELTVDDVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             ----CcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence                113357899999999999875432  33 455544

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-22  Score=171.01  Aligned_cols=224  Identities=17%  Similarity=0.160  Sum_probs=157.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++++|+||||+|+||.+++++|+++|++|++++|+.... ....+++...+..+.++.+|+++.+++..+++     
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC-QAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            567889999999999999999999999999999999975432 22223332223467889999999998887664     


Q ss_pred             --CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++||+|+.....     ...+.+...+++|+.++..+++++.    +.+.+++|++||...+.+.+         
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  153 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGD---------  153 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCC---------
Confidence              479999999854311     1122235678999999998887774    34567999999976554332         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +.+.|+.||.+.+.+++.++++   .|++++.++||.+.++........ ...........      .
T Consensus       154 ------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~------~  214 (252)
T PRK07035        154 ------------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAILKQALAHI------P  214 (252)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHHHHHHccC------C
Confidence                        1455999999999999988765   389999999999977653322111 11111221111      2


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ...+..++|+|+++++++.....  .| .+.+.|.
T Consensus       215 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        215 LRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             CCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            34467899999999999976432  34 3455443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.91  E-value=8.8e-23  Score=168.45  Aligned_cols=206  Identities=22%  Similarity=0.221  Sum_probs=152.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |++++++|||||++||.+++++|+++|++|+++.|+.++-.. ..+++... +-.++++.+|+++++++..+.+      
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~-la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEA-LAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999999774322 11222221 2357899999999998888764      


Q ss_pred             -CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||.....    ...+....++++|+.+...|..+..    +.+.++||+++|.+++.+.|.          
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~----------  152 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY----------  152 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc----------
Confidence             489999999976544    1223347789999999888877775    446679999999988775542          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhh---hhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFG---KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~---~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 .+.|+.||...-.+...+.   +..|+.|+.+.||.+.++... .            .+.........+
T Consensus       153 -----------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~------------~~~~~~~~~~~~  208 (265)
T COG0300         153 -----------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A------------KGSDVYLLSPGE  208 (265)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c------------cccccccccchh
Confidence                       5779999998655544443   335899999999999887643 1            000010111234


Q ss_pred             ccccHHHHHHHHHHhhccCC
Q 020924          224 MIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~  243 (319)
                      -++.++|+|+..+..+++.+
T Consensus       209 ~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         209 LVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             hccCHHHHHHHHHHHHhcCC
Confidence            57899999999999998754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.6e-23  Score=171.61  Aligned_cols=211  Identities=19%  Similarity=0.230  Sum_probs=153.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|+||||||||+||++++++|+++|++|++++|+..+... .+.++.  ..+.+++.+|++|.+++..+++     
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQ-TLPGVP--ADALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHH-HHHHHh--hcCceEEEeecCCHHHHHHHHHHHHHH
Confidence            44667999999999999999999999999999999998654222 222222  2356788899999998887765     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        ++|+|||+++.......    .+.+...+++|+.++.++++++.+    .+.+++|++||..++.+.+          
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  149 (239)
T PRK12828         80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP----------  149 (239)
T ss_pred             hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC----------
Confidence              57999999986543211    112345678999999999988853    4678999999977654332          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.+|.+.+.+++.++.+   ++++++.+||+.++++......                 .....
T Consensus       150 -----------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~-----------------~~~~~  201 (239)
T PRK12828        150 -----------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM-----------------PDADF  201 (239)
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC-----------------Cchhh
Confidence                       1455999999999888877653   5899999999999987422110                 00122


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ..|++++|+|++++.++.....  .| .+.++|
T Consensus       202 ~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        202 SRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             hcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence            3479999999999999986432  34 445554

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=172.24  Aligned_cols=213  Identities=17%  Similarity=0.128  Sum_probs=151.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||.+++++|+++|++|++++|+.++. .....++...+.++.++.+|+++.++++++++     
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL-DQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            667889999999999999999999999999999999986532 22223333334568889999999998887765     


Q ss_pred             --CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccc-cCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVG-LNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~-~~~~~~~~~~~  143 (319)
                        .+|++||+||.....     ...+.+...+++|+.++..+.+++.    +.+.++||++||..++. +.+        
T Consensus        81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~--------  152 (254)
T PRK07478         81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFP--------  152 (254)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCC--------
Confidence              579999999964321     1122346789999998887766554    44567899999976542 211        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   ....|+.||.+.+.+++.++.++   |++++.++||.+.++....... .... .......     .
T Consensus       153 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~-~~~~~~~-----~  212 (254)
T PRK07478        153 -------------GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD-TPEA-LAFVAGL-----H  212 (254)
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC-CHHH-HHHHHhc-----C
Confidence                         14559999999999999887653   7999999999998774322111 1111 1111111     1


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+..++|+|+++++++...
T Consensus       213 ~~~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        213 ALKRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             CCCCCcCHHHHHHHHHHHcCch
Confidence            2344678999999999999754

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.91  E-value=8.7e-23  Score=172.53  Aligned_cols=211  Identities=14%  Similarity=0.090  Sum_probs=152.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+........   +...+.++.++.+|++|.+++.++++     
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQ---VEALGRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHH---HHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999888643221122   22224568889999999999988775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||......    ..+.++..+++|+.++..+++++.+.    + .++||++||...+.+.+.        
T Consensus        81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------  152 (251)
T PRK12481         81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR--------  152 (251)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC--------
Confidence              4799999999754321    12335778999999999998887643    2 359999999876654321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.||.+.+.+++.++.+   +|++++.++||.+-++....... ............      .
T Consensus       153 -------------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~------p  212 (251)
T PRK12481        153 -------------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA-DTARNEAILERI------P  212 (251)
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc-ChHHHHHHHhcC------C
Confidence                         234999999999999887764   58999999999998764321100 011111111111      2


Q ss_pred             ccccccHHHHHHHHHHhhccC
Q 020924          222 LRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ...+..++|+|+++++++...
T Consensus       213 ~~~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        213 ASRWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             CCCCcCHHHHHHHHHHHhCcc
Confidence            335789999999999999753

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1e-22  Score=171.00  Aligned_cols=202  Identities=19%  Similarity=0.172  Sum_probs=151.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++++++||||+|+||++++++|+++|++|++++|+..+. .....++...+.++.++.+|+++.+++.++++       
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG   83 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5568999999999999999999999999999999986532 22223333334578899999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+|||++|......    ..+.+...+++|+.++.++++++..    .+.+++|++||...+++.+.           
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-----------  152 (239)
T PRK07666         84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV-----------  152 (239)
T ss_pred             CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC-----------
Confidence            5899999998754321    1122356789999999999988864    45678999999776654321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+++.++.+   .+++++++||+.+.++......          ..      ......
T Consensus       153 ----------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----------~~------~~~~~~  206 (239)
T PRK07666        153 ----------TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG----------LT------DGNPDK  206 (239)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc----------cc------ccCCCC
Confidence                      345999999999888877643   5899999999999877432110          00      011234


Q ss_pred             cccHHHHHHHHHHhhccC
Q 020924          225 IVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~  242 (319)
                      ++.++|+|++++.++..+
T Consensus       207 ~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        207 VMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            688999999999999875

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-22  Score=170.81  Aligned_cols=205  Identities=16%  Similarity=0.105  Sum_probs=151.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+....         ..+.+++++.+|+++.+++.++++     
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET---------VDGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---------hcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            678889999999999999999999999999999999976430         113467899999999998888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|+||||||......    ..+.+...+++|+.++..+++++.+.     +.++||++||.....+.+.        
T Consensus        73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------  144 (252)
T PRK07856         73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG--------  144 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC--------
Confidence              3699999999654321    11224677899999999999988652     3468999999776554321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                   ...|+.+|.+.+.+++.++.++  .++++.++|+.+.++........ ...........      ..
T Consensus       145 -------------~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~------~~  204 (252)
T PRK07856        145 -------------TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-AEGIAAVAATV------PL  204 (252)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC-HHHHHHHhhcC------CC
Confidence                         3559999999999999887753  38999999999987753221100 11111111111      23


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+..++|+|+++++++...
T Consensus       205 ~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        205 GRLATPADIAWACLFLASDL  224 (252)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            45678999999999998753

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-22  Score=171.14  Aligned_cols=224  Identities=15%  Similarity=0.137  Sum_probs=157.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+|+||||+|+||++++++|+++|++|++++|+.+.. ......+...+.++.++.+|++|.+++..+++     
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG-EETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346679999999999999999999999999999999986542 22233333334578999999999998887765     


Q ss_pred             --CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|+|||+||......     ..+.+...+++|+.++..+++++.    +.+.+++|++||..++.+.+.        
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------  153 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK--------  153 (253)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--------
Confidence              3599999999643221     122346678899999988777654    345579999999776654321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.+|.+.+.+++.++.++   |++++.++||.+-++....................      .
T Consensus       154 -------------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~  214 (253)
T PRK06172        154 -------------MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMH------P  214 (253)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccC------C
Confidence                         4559999999999998887654   79999999999977753322111111111111111      2


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCceE-EEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEGRY-ICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~~  252 (319)
                      ...+..++|+++.+++++....  ..|.+ .++|
T Consensus       215 ~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        215 VGRIGKVEEVASAVLYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             CCCccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            2346789999999999997542  24543 4444

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-22  Score=171.42  Aligned_cols=211  Identities=13%  Similarity=0.073  Sum_probs=151.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+||||||+|+||++++++|+++|++|+++.|+...  ....+.+...+.++.++.+|+++.+++..+++      
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNW--DETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3567999999999999999999999999999999997321  11112222223568899999999998888775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++||+||......    ..+.++..+++|+.++..+++++.+    .+.+++|++||...+.+.+.          
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  159 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF----------  159 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC----------
Confidence             5799999999654221    1223466789999998888877653    45679999999876544321          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.+|.+.+.+++.++++   +|++++.++||.+.++....... ...........  .    ...
T Consensus       160 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~--~----~~~  221 (258)
T PRK06935        160 -----------VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA-DKNRNDEILKR--I----PAG  221 (258)
T ss_pred             -----------chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc-ChHHHHHHHhc--C----CCC
Confidence                       345999999999999988775   38999999999998775321110 01111111111  1    335


Q ss_pred             ccccHHHHHHHHHHhhccC
Q 020924          224 MIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+..++|++.++.+++...
T Consensus       222 ~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        222 RWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             CCCCHHHHHHHHHHHcChh
Confidence            5789999999999998753

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.91  E-value=1.6e-22  Score=177.14  Aligned_cols=192  Identities=18%  Similarity=0.139  Sum_probs=133.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++.+|+|+||||+|+||++++++|+++|++|++++|+..+. .....++.....++.++.+|++|.+++.++++      
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA-EAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            35688999999999999999999999999999999976532 12223332223468899999999999888775      


Q ss_pred             -CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----C--CCEEEEeccccccccCCC--CCCCc
Q 020924           76 -GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----K--VKRVIVVSSGVAVGLNPR--WPKGQ  141 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~--~~~iv~~SS~~~~~~~~~--~~~~~  141 (319)
                       .+|+||||||.....     ...+.++..+++|+.++.++++++.+.    +  .+|||++||...+++...  .+...
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence             389999999964321     112234678999999999999888753    2  359999999765542110  00000


Q ss_pred             ccCCCC-------CCCc-----cccccCCchHHhhHHHHHHHHHHhhhhC----CceEEEEecCcccCC
Q 020924          142 IMDETC-------WSDK-----EYCRTTNNWYCLSKTEAESEALEFGKKT----GLDVVTICPNLVLGP  194 (319)
Q Consensus       142 ~~~E~~-------~~~~-----~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~G~  194 (319)
                      +.+.++       +..|     ..+..+...|+.||.+.+.+++++++++    |++++.+|||.|++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence            001000       0000     0112346789999999988888887654    799999999999854

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-22  Score=170.85  Aligned_cols=219  Identities=15%  Similarity=0.120  Sum_probs=157.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++..+++     
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATL-EAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            346789999999999999999999999999999999986432 22233333334568899999999998887765     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+|||++|.......    .+.+...+++|+.++.++.+++.+    .+.++||++||..+..+.++         
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------  156 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG---------  156 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC---------
Confidence              35999999996543211    123456789999999999977754    46679999999766544321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++....... ....... +... .    ..
T Consensus       157 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~-~~~~-~----~~  217 (256)
T PRK06124        157 ------------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPW-LAQR-T----PL  217 (256)
T ss_pred             ------------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHH-HHhc-C----CC
Confidence                        345999999999988887654   38999999999999885332111 1111111 1111 1    23


Q ss_pred             cccccHHHHHHHHHHhhccCCC--CceE
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EGRY  248 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~~~  248 (319)
                      ..+++++|+++++++++.....  .|.+
T Consensus       218 ~~~~~~~~~a~~~~~l~~~~~~~~~G~~  245 (256)
T PRK06124        218 GRWGRPEEIAGAAVFLASPAASYVNGHV  245 (256)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCcCCCE
Confidence            4589999999999999986533  4544

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.91  E-value=2.7e-22  Score=170.05  Aligned_cols=222  Identities=15%  Similarity=0.126  Sum_probs=157.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|+|+||||+|+||++++++|+++|++|++++|+..... .....+...+.++.++.+|++|.+++.++++     
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999998755322 1222222223467889999999998887654     


Q ss_pred             --CcceEEEecccCCCCCCC---CccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTTVP---NPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~---~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|++||+||........   +.+...+++|+.++.++++++..    .+.++||++||.....+.+           
T Consensus        86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------  154 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI-----------  154 (255)
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC-----------
Confidence              479999999965432111   22355689999999999999873    3446999999976543322           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +...|+.+|.+.+.+++.++.+   .+++++++.|+.+.++.....  ....+........      ...
T Consensus       155 ----------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~------~~~  216 (255)
T PRK06113        155 ----------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHT------PIR  216 (255)
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhcC------CCC
Confidence                      1345999999999999988654   479999999999987753221  1122222222211      234


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      .+..++|+++++++++.....  .| .+.++|
T Consensus       217 ~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g  248 (255)
T PRK06113        217 RLGQPQDIANAALFLCSPAASWVSGQILTVSG  248 (255)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            477999999999999975432  34 445554

>PRK08589 short chain dehydrogenase; Validated

Probab=99.91  E-value=2.2e-22  Score=172.15  Aligned_cols=218  Identities=17%  Similarity=0.152  Sum_probs=151.1

Q ss_pred             CC-CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MA-LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |. |++|++|||||+|+||++++++|+++|++|++++|+ .. ......++...+.++.++.+|+++.+++..+++    
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA-VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKE   78 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH-HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHH
Confidence            44 678999999999999999999999999999999998 32 223333333333468899999999988887664    


Q ss_pred             ---CcceEEEecccCCCC-C----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPST-T----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~-~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         .+|++|||||..... .    ..+.+...+++|+.++..+++++.+.   ..++||++||...+.+.+.        
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  150 (272)
T PRK08589         79 QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY--------  150 (272)
T ss_pred             HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC--------
Confidence               479999999975321 1    11224567889999998888877643   2269999999766543321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.+|.+.+.+++.++.+   .|++++.++||.+.++...................... ....
T Consensus       151 -------------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~  216 (272)
T PRK08589        151 -------------RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQK-WMTP  216 (272)
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhh-ccCC
Confidence                         345999999999999988765   37999999999998775322110000000011100000 0012


Q ss_pred             ccccccHHHHHHHHHHhhccC
Q 020924          222 LRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ...+..++|+|+++++++...
T Consensus       217 ~~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        217 LGRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             CCCCcCHHHHHHHHHHHcCch
Confidence            334678999999999999753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-22  Score=172.07  Aligned_cols=212  Identities=17%  Similarity=0.097  Sum_probs=152.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++++++|||||+|+||.+++++|+++|++|++++|+.++. ......+...+.++.++.+|+++.+++..+++      
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL-DEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999975432 22222332234578899999999998887665      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE-----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~-----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|+|||+||.......    .+.+..++++|+.++.++++++.+     .+.+++|++||..+..+.+          
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  155 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR----------  155 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC----------
Confidence             57999999986433211    123467889999999999999974     3557899999976544322          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 +.+.|+.+|.+.+.+++.++.+.  +++++.++|+.+.++..... .....+ .....+..     ...
T Consensus       156 -----------~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~-~~~~~~~~-----~~~  217 (263)
T PRK07814        156 -----------GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVV-AANDEL-RAPMEKAT-----PLR  217 (263)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhc-cCCHHH-HHHHHhcC-----CCC
Confidence                       14569999999999999887653  58999999999877643211 001111 11111110     223


Q ss_pred             ccccHHHHHHHHHHhhccC
Q 020924          224 MIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+..++|+|+++++++...
T Consensus       218 ~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        218 RLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             CCcCHHHHHHHHHHHcCcc
Confidence            4578999999999999753

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.3e-22  Score=169.21  Aligned_cols=211  Identities=15%  Similarity=0.181  Sum_probs=148.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--------   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   75 (319)
                      ++|+++||||+|+||++++++|+++|++|++..++..........++...+..+..+.+|+++.+++..+++        
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            568999999999999999999999999998876433222222223333334467788899999877665432        


Q ss_pred             -----CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 -----GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                           .+|++|||||.......    .+.++.++++|+.++..+++++.+.  ...+||++||..++.+.+.        
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  154 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD--------  154 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC--------
Confidence                 58999999996432211    1224667889999999999988764  2359999999876543321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.||.+.+.+++.++.+   +|++++.+.||.+.++.......  ..........     ...
T Consensus       155 -------------~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~--~~~~~~~~~~-----~~~  214 (252)
T PRK12747        155 -------------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS--DPMMKQYATT-----ISA  214 (252)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc--CHHHHHHHHh-----cCc
Confidence                         355999999999999887665   48999999999998875322110  0111111111     112


Q ss_pred             ccccccHHHHHHHHHHhhccC
Q 020924          222 LRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+.+.+++|+|+++.+++...
T Consensus       215 ~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        215 FNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             ccCCCCHHHHHHHHHHHcCcc
Confidence            456789999999999998753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-22  Score=171.53  Aligned_cols=224  Identities=19%  Similarity=0.143  Sum_probs=157.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+.. ......+...+.++.++.+|++|.+++.++++      
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEEL-EEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999975432 12222222223467889999999998876654      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|+|||+||......    ..+.+...+++|+.++.++++++.+.     +.++||++||...+++.+..   .    
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~---~----  160 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE---V----  160 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc---c----
Confidence             4799999998643221    11223567889999999999988654     56799999997666544210   0    


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                .+...|+.+|.+.+.+++.++++   +++++++++|+.+.++....   .+..+......+.      ..
T Consensus       161 ----------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~------~~  221 (259)
T PRK08213        161 ----------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TLERLGEDLLAHT------PL  221 (259)
T ss_pred             ----------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hhHHHHHHHHhcC------CC
Confidence                      01356999999999999988765   47999999999987764321   2222333322222      23


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCce-EEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEGR-YICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~  252 (319)
                      ..+...+|++.++..++....  ..|. +++++
T Consensus       222 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        222 GRLGDDEDLKGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            345679999999998886542  2343 34444

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=174.42  Aligned_cols=221  Identities=19%  Similarity=0.209  Sum_probs=149.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.| +|+|+||||+|+||++++++|+++|++|++++|+.+..  ..+..     .+++++.+|++|.++++.+++     
T Consensus         1 m~~-~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~--~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~   72 (277)
T PRK05993          1 MDM-KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV--AALEA-----EGLEAFQLDYAEPESIAALVAQVLEL   72 (277)
T ss_pred             CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHH-----CCceEEEccCCCHHHHHHHHHHHHHH
Confidence            553 47899999999999999999999999999999986532  22221     357889999999988877654     


Q ss_pred             ---CcceEEEecccCCCCCCC----CccchhhhhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPSTTVP----NPQMELLEPAVKG----TLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~----~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         .+|+||||||........    +.+...+++|+.+    +..+++.+++.+.++||++||..++.+.+         
T Consensus        73 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~---------  143 (277)
T PRK05993         73 SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMK---------  143 (277)
T ss_pred             cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCC---------
Confidence               469999999865443211    2235678999999    55566666667778999999976544321         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCCCccHH-----------HHHHH
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKVNTSSL-----------VLIKL  210 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~~~~~~-----------~~~~~  210 (319)
                                  +...|+.||.+.+.+++.++.   .+|+++++++||.+.++...........           .....
T Consensus       144 ------------~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (277)
T PRK05993        144 ------------YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQ  211 (277)
T ss_pred             ------------ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHH
Confidence                        145699999999999887753   3589999999999987643211000000           00000


Q ss_pred             HhcCccccCCcccccccHHHHHHHHHHhhccCCCCceEEEe
Q 020924          211 LKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICT  251 (319)
Q Consensus       211 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  251 (319)
                      ..... .......-.+.++++|+.++.++++++....|.++
T Consensus       212 ~~~~~-~~~~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~~  251 (277)
T PRK05993        212 MARLE-GGGSKSRFKLGPEAVYAVLLHALTAPRPRPHYRVT  251 (277)
T ss_pred             HHHHH-hhhhccccCCCHHHHHHHHHHHHcCCCCCCeeeeC
Confidence            00000 00001112368999999999999876554455443

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=172.67  Aligned_cols=207  Identities=17%  Similarity=0.143  Sum_probs=151.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +++||||||+|+||++++++|+++|++|++++|+..+.. .....+...+.++.++.+|++|.+.+..+++       .+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLA-SLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999865322 2223333334578889999999999888765       57


Q ss_pred             ceEEEecccCCCCCCCC-----ccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           78 NGVFHIACPAPSTTVPN-----PQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~-----~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      |+||||||........+     .+...+++|+.++.++++.+.+.   +.+++|++||..++.+.+.             
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  146 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT-------------  146 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC-------------
Confidence            99999998754431111     12456899999999999998642   4468999999776654321             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMI  225 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  225 (319)
                              ...|+.+|.+.+.+++.++.+   .++++++++|+.+.++.......         ..+.+.. .+.+..++
T Consensus       147 --------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~  209 (263)
T PRK06181        147 --------RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD---------GDGKPLGKSPMQESKI  209 (263)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc---------ccccccccccccccCC
Confidence                    456999999999988877543   48999999999998765321100         0111111 22233578


Q ss_pred             ccHHHHHHHHHHhhccC
Q 020924          226 VDVRDVAEALLLAYEKA  242 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~  242 (319)
                      ++++|+|++++.+++..
T Consensus       210 ~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        210 MSAEECAEAILPAIARR  226 (263)
T ss_pred             CCHHHHHHHHHHHhhCC
Confidence            99999999999999853

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.5e-22  Score=168.66  Aligned_cols=218  Identities=19%  Similarity=0.146  Sum_probs=156.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+||||||+|+||++++++|+++|++|++++|+....  .......  ..++..+.+|+++.+++..+++      
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~--~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA--EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45679999999999999999999999999999999976532  1222221  2456789999999998887765      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+|||+||.......    .+.+...+++|+.++.++++++.+.    +.++||++||....++.+.          
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------  157 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER----------  157 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC----------
Confidence             47999999997543211    1223557899999999999998753    5679999999876654432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.+|.+.+.+++.++.+   .|++++.++|+.+.++......  ...........      ....
T Consensus       158 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~------~~~~  218 (255)
T PRK06841        158 -----------HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW--AGEKGERAKKL------IPAG  218 (255)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccccc--chhHHHHHHhc------CCCC
Confidence                       345999999999988888765   4899999999999877532111  01111111111      1345


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cce-EEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EGR-YICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~  252 (319)
                      .+.+++|+|++++.++.....  .|. +.++|
T Consensus       219 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        219 RFAYPEEIAAAALFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            688999999999999976433  443 45544

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.6e-22  Score=171.30  Aligned_cols=212  Identities=17%  Similarity=0.101  Sum_probs=151.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.... ....+++...+.++..+.+|++|.+++.++++     
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDAL-EKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999976532 22223333334568889999999998887764     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||......    ..+.+...+++|+.++..+++++.+.    + .+++|++||..+.....   .     
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---~-----  155 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV---P-----  155 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC---C-----
Confidence              5899999999754321    12234567789999999999988643    2 24799999965432110   0     


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                 .....|+.+|.+.+.+++.++.+   +|++++.++||.+-++.....    ...........      .
T Consensus       156 -----------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~------~  214 (253)
T PRK05867        156 -----------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPKI------P  214 (253)
T ss_pred             -----------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhcC------C
Confidence                       01345999999999999988765   389999999999987753321    11111111111      2


Q ss_pred             ccccccHHHHHHHHHHhhccC
Q 020924          222 LRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ...+..++|+|+++++++...
T Consensus       215 ~~r~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        215 LGRLGRPEELAGLYLYLASEA  235 (253)
T ss_pred             CCCCcCHHHHHHHHHHHcCcc
Confidence            345789999999999999753

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.8e-22  Score=169.07  Aligned_cols=204  Identities=17%  Similarity=0.172  Sum_probs=149.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh-hhHHHHhcCcce
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY-DSVKSAIVGCNG   79 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~   79 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+....          ...++.++.+|+++. +.+.+.+..+|+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~id~   70 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----------LSGNFHFLQLDLSDDLEPLFDWVPSVDI   70 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----------cCCcEEEEECChHHHHHHHHHhhCCCCE
Confidence            788889999999999999999999999999999999875431          124678899999987 444444557899


Q ss_pred             EEEecccCCC-----CCCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           80 VFHIACPAPS-----TTVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        80 vi~~a~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      |||+||....     ....+.+...+++|+.++.++++++..    .+.++||++||...+.+.++              
T Consensus        71 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  136 (235)
T PRK06550         71 LCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG--------------  136 (235)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------
Confidence            9999985421     111223466789999999999998864    34468999999876654321              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                             ...|+.+|.+.+.+++.++.++   |+++++++|+.+.++....... ............      ....+..
T Consensus       137 -------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~  202 (235)
T PRK06550        137 -------GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARET------PIKRWAE  202 (235)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccC------CcCCCCC
Confidence                   3459999999998888877653   8999999999998875432211 111111111111      3455789


Q ss_pred             HHHHHHHHHHhhccC
Q 020924          228 VRDVAEALLLAYEKA  242 (319)
Q Consensus       228 v~D~a~~~~~~~~~~  242 (319)
                      ++|+|+++++++...
T Consensus       203 ~~~~a~~~~~l~s~~  217 (235)
T PRK06550        203 PEEVAELTLFLASGK  217 (235)
T ss_pred             HHHHHHHHHHHcChh
Confidence            999999999999654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3.3e-22  Score=169.31  Aligned_cols=220  Identities=19%  Similarity=0.195  Sum_probs=152.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG----   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   76 (319)
                      |.+++|+++||||+|+||+++++.|+++|++|+++.++............   ..++.++.+|++|.+++..++++    
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            66778899999999999999999999999999887665432211111211   24688899999999988877653    


Q ss_pred             ----cceEEEecccCCC------C----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCC
Q 020924           77 ----CNGVFHIACPAPS------T----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWP  138 (319)
Q Consensus        77 ----~d~vi~~a~~~~~------~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~  138 (319)
                          +|++||+|+....      .    ...+.+...+++|+.++.++++++.+    .+.+++|++||.....+.    
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----  153 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPV----  153 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC----
Confidence                8999999985311      0    01122356799999999999999864    345699999995432111    


Q ss_pred             CCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc
Q 020924          139 KGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  215 (319)
                                       .+.+.|+.+|.+.+.+++.++++   .+++++.++||.+.++.....  ............. 
T Consensus       154 -----------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~-  213 (253)
T PRK08642        154 -----------------VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--TPDEVFDLIAATT-  213 (253)
T ss_pred             -----------------CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--CCHHHHHHHHhcC-
Confidence                             11456999999999999998775   479999999999977532211  1122222221111 


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                           ....+.+++|+++++.+++....  ..| .+.+.|
T Consensus       214 -----~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        214 -----PLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             -----CcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence                 23458899999999999997532  233 444444

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=2.3e-22  Score=170.52  Aligned_cols=225  Identities=19%  Similarity=0.176  Sum_probs=151.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhcC----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIVG----   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~----   76 (319)
                      +++|+|+||||||+||++++++|+++|++|++++|+.+... .....+..  ....+.++.+|++|.+++.++++.    
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALN-ELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHH-HHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999998765421 12222211  123466779999999999887763    


Q ss_pred             ---cceEEEecccCCCC-------CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcc
Q 020924           77 ---CNGVFHIACPAPST-------TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        77 ---~d~vi~~a~~~~~~-------~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                         +|+|||||+.....       ...+.+...+++|+.++..+++++.+    .+.++||++||.+++++..     ..
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----~~  155 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-----FE  155 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-----ch
Confidence               79999999753211       11122356678898888777666653    4667999999977655321     11


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                      ..++.+..      ....|+.+|.+.+.+++.++.+   +++++++++|+.++++..       ..+........     
T Consensus       156 ~~~~~~~~------~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------~~~~~~~~~~~-----  217 (256)
T PRK09186        156 IYEGTSMT------SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------EAFLNAYKKCC-----  217 (256)
T ss_pred             hccccccC------CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------HHHHHHHHhcC-----
Confidence            12222111      1235999999999998877664   489999999998876531       11211111111     


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cce-EEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EGR-YICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~  252 (319)
                       ....+++++|+|++++.++.....  .|. +.+.+
T Consensus       218 -~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        218 -NGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             -CccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence             223578999999999999975432  344 34444

>PRK06398 aldose dehydrogenase; Validated

Probab=99.91  E-value=2.1e-22  Score=170.84  Aligned_cols=206  Identities=15%  Similarity=0.152  Sum_probs=149.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+....            ..+.++.+|++|.+++.++++      
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            47789999999999999999999999999999999976531            257889999999998887764      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+           
T Consensus        71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  139 (258)
T PRK06398         71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR-----------  139 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC-----------
Confidence             57999999997543211    223456789999999999888864    3557999999976654332           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCC----CccHHHHHHHHhcCccccCC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKV----NTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~  220 (319)
                                ....|+.+|.+.+.+++.++.++  +++++.++||.+.++......    ........+....  .....
T Consensus       140 ----------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  207 (258)
T PRK06398        140 ----------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE--WGEMH  207 (258)
T ss_pred             ----------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh--hhhcC
Confidence                      14569999999999999887764  499999999999776422110    0000101100000  00011


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+..++|+|+++++++...
T Consensus       208 ~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        208 PMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             CcCCCcCHHHHHHHHHHHcCcc
Confidence            3345778999999999998754

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.91  E-value=2.2e-22  Score=172.80  Aligned_cols=212  Identities=19%  Similarity=0.165  Sum_probs=151.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.... ....+++...+.++.++.+|++|.+++..+++      
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKA-EAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46779999999999999999999999999999999975432 22223333233468889999999988887664      


Q ss_pred             -CcceEEEecccCCCCC-------------------CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEecccccc
Q 020924           76 -GCNGVFHIACPAPSTT-------------------VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAV  131 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~-------------------~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~  131 (319)
                       .+|++||+||......                   ..+.+...+++|+.++..+++++.    +.+.++||++||..++
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence             5799999999543211                   012245678899999987766654    3455799999998765


Q ss_pred             ccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCC----CccH
Q 020924          132 GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKV----NTSS  204 (319)
Q Consensus       132 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~----~~~~  204 (319)
                      .+.+.                     ...|+.+|.+.+.+++.++.++   +++++.++|+.+.++......    ....
T Consensus       166 ~~~~~---------------------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~  224 (278)
T PRK08277        166 TPLTK---------------------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLT  224 (278)
T ss_pred             CCCCC---------------------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccch
Confidence            43321                     3459999999999999887664   799999999999887532110    0001


Q ss_pred             HHHHHHHhcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          205 LVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      .........      .....+..++|+|+++++++..
T Consensus       225 ~~~~~~~~~------~p~~r~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        225 ERANKILAH------TPMGRFGKPEELLGTLLWLADE  255 (278)
T ss_pred             hHHHHHhcc------CCccCCCCHHHHHHHHHHHcCc
Confidence            111111111      1345678999999999999876

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.91  E-value=3e-22  Score=168.91  Aligned_cols=209  Identities=15%  Similarity=0.105  Sum_probs=146.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      |++++||||+|+||++++++|+++|++|+++. |+... .......+...+.++..+.+|++|.++++++++       +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHA-AQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999998754 44332 222333333334568889999999999988765       3


Q ss_pred             cceEEEecccCCCCC-CC----CccchhhhhHHHHHHHHHHHHHhCC-------CCEEEEeccccccccCCCCCCCcccC
Q 020924           77 CNGVFHIACPAPSTT-VP----NPQMELLEPAVKGTLNVVKACLEAK-------VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~-~~----~~~~~~~~~Nv~~~~~l~~~~~~~~-------~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                      +|+|||+|+...... ..    +.+...+++|+.++.++++++.+..       .++||++||..++++.+.        
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~--------  151 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG--------  151 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC--------
Confidence            689999999653221 11    1234678999999998888776431       347999999876654421        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  ....|+.+|...+.+++.++.+   .+++++++||+.++|+.....  .............+      
T Consensus       152 ------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~------  211 (247)
T PRK09730        152 ------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG--GEPGRVDRVKSNIP------  211 (247)
T ss_pred             ------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC--CCHHHHHHHHhcCC------
Confidence                        0134999999999988877654   489999999999999864322  11222222222221      


Q ss_pred             ccccccHHHHHHHHHHhhccC
Q 020924          222 LRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .....+++|+|+++++++...
T Consensus       212 ~~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        212 MQRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             CCCCcCHHHHHHHHHhhcChh
Confidence            122348999999999998754

>PRK05717 oxidoreductase; Validated

Probab=99.91  E-value=3.2e-22  Score=169.58  Aligned_cols=207  Identities=15%  Similarity=0.114  Sum_probs=149.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+..+.. .....+   ..++.++.+|+++.+++..+++       
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGS-KVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56799999999999999999999999999999988754321 111221   2467889999999988876553       


Q ss_pred             CcceEEEecccCCCC-C-----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPST-T-----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|+||||||..... .     ..+.+...+++|+.++.++++++.+.   ..+++|++||...+.+.+.          
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~----------  153 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD----------  153 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC----------
Confidence            379999999975431 1     11223578899999999999999742   3368999999876654321          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                 .+.|+.+|.+.+.+++.++.++  +++++.++|+.+.++......  ... +.......     .....
T Consensus       154 -----------~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~--~~~-~~~~~~~~-----~~~~~  214 (255)
T PRK05717        154 -----------TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR--AEP-LSEADHAQ-----HPAGR  214 (255)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc--chH-HHHHHhhc-----CCCCC
Confidence                       3459999999999999988765  589999999999987532211  111 11111111     12245


Q ss_pred             cccHHHHHHHHHHhhccC
Q 020924          225 IVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~  242 (319)
                      +.+++|+|.++..++...
T Consensus       215 ~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        215 VGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             CcCHHHHHHHHHHHcCch
Confidence            779999999999998653

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-22  Score=173.64  Aligned_cols=200  Identities=20%  Similarity=0.084  Sum_probs=147.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++++++||||||+||++++++|+++|++|++++|+.+... .....+    .++.++.+|++|.+++.++++     
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAK-ETAAEL----GLVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh----ccceEEEccCCCHHHHHHHHHHHHHH
Confidence            7888999999999999999999999999999999998765321 111221    257889999999998876654     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||.......    .+.+...+++|+.++.++++.+.    +.+.++||++||..++.+.+.         
T Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  146 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG---------  146 (273)
T ss_pred             cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC---------
Confidence              47999999997543221    12235678999999888887765    456679999999876544321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+.+.++.+   .|+++++++|+.+.++.....               .   +...
T Consensus       147 ------------~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~---------------~---~~~~  196 (273)
T PRK07825        147 ------------MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT---------------G---GAKG  196 (273)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc---------------c---cccC
Confidence                        455999999888777766543   489999999999866532111               0   0112


Q ss_pred             cccccHHHHHHHHHHhhccCCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ..+++++|+|+.++.++.++..
T Consensus       197 ~~~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        197 FKNVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             CCCCCHHHHHHHHHHHHhCCCC
Confidence            2468999999999999987643

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.8e-22  Score=170.23  Aligned_cols=212  Identities=17%  Similarity=0.128  Sum_probs=153.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-EcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGT-AREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |+++++++|||||||+||++++++|+++|++|+++ .|+.... ......+...+.++.++.+|++|.+++.++++    
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA-QELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            78888999999999999999999999999999998 8775432 12222222234568899999999998887765    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         .+|+|||++|......    ..+.+...+++|+.++.++++++..    .+.+++|++||...+++.+.        
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------  151 (247)
T PRK05565         80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC--------  151 (247)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC--------
Confidence               6899999999763321    1122466789999999888888764    35568999999877665431        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.+|.+.+.+++.++.+   .|++++.+||+.+.++......   ..........      ..
T Consensus       152 -------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~---~~~~~~~~~~------~~  209 (247)
T PRK05565        152 -------------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS---EEDKEGLAEE------IP  209 (247)
T ss_pred             -------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC---hHHHHHHHhc------CC
Confidence                         345999999988888877654   4899999999999776433221   1111111111      12


Q ss_pred             ccccccHHHHHHHHHHhhccCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ...+..++|++++++.++....
T Consensus       210 ~~~~~~~~~va~~~~~l~~~~~  231 (247)
T PRK05565        210 LGRLGKPEEIAKVVLFLASDDA  231 (247)
T ss_pred             CCCCCCHHHHHHHHHHHcCCcc
Confidence            3446799999999999997643

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=171.89  Aligned_cols=197  Identities=19%  Similarity=0.181  Sum_probs=145.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-------c
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-------C   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~   77 (319)
                      +|+|+||||||+||++++++|+++|++|++++|+.+.. ....+.+... .++.++.+|++|.+++.++++.       +
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDAL-QAFAARLPKA-ARVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhcccC-CeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            36899999999999999999999999999999985432 1222222211 2688999999999998877653       7


Q ss_pred             ceEEEecccCCCCCC-----CCccchhhhhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTTV-----PNPQMELLEPAVKGTLNVVKA----CLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~~-----~~~~~~~~~~Nv~~~~~l~~~----~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |++||+||.......     .+.+...+++|+.++.+++++    +++.+.++||++||..++.+.+.            
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~------------  147 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG------------  147 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC------------
Confidence            999999996542211     122467889999999998874    44556679999999877655431            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.||.+.+.+++.++.   .+|++++++||+.+.++......                 .  ....+
T Consensus       148 ---------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------------~--~~~~~  199 (257)
T PRK07024        148 ---------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP-----------------Y--PMPFL  199 (257)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC-----------------C--CCCCc
Confidence                     34599999999999888753   35899999999999887422110                 0  01124


Q ss_pred             ccHHHHHHHHHHhhccCC
Q 020924          226 VDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~  243 (319)
                      +.++|+|+.++.++.+..
T Consensus       200 ~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        200 MDADRFAARAARAIARGR  217 (257)
T ss_pred             cCHHHHHHHHHHHHhCCC
Confidence            689999999999998643

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-22  Score=166.68  Aligned_cols=209  Identities=18%  Similarity=0.160  Sum_probs=146.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---CcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~v   80 (319)
                      +||+++||||+|+||++++++|+++ ++|++++|+....  ..+.+.   .++++++.+|++|.+++.++++   ++|+|
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~--~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   75 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERL--DELAAE---LPGATPFPVDLTDPEAIAAAVEQLGRLDVL   75 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHH--HHHHHH---hccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            4679999999999999999999999 9999999975431  122111   1357889999999999998887   58999


Q ss_pred             EEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCcccCCCCCCCccc
Q 020924           81 FHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLE---AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        81 i~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  153 (319)
                      ||++|........    +.+...+++|+.+..++.+.+.+   .+.+++|++||..++.+.+.                 
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~-----------------  138 (227)
T PRK08219         76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG-----------------  138 (227)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC-----------------
Confidence            9999875432111    11345678999986555555432   13469999999776543321                 


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhh-CC-ceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKK-TG-LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDV  231 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~-~~-~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  231 (319)
                          ...|+.+|.+.+.+++.++.+ .+ +++..++|+.+.++....       +. .. .+...    ....+++++|+
T Consensus       139 ----~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------~~-~~-~~~~~----~~~~~~~~~dv  201 (227)
T PRK08219        139 ----WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------LV-AQ-EGGEY----DPERYLRPETV  201 (227)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------hh-hh-hcccc----CCCCCCCHHHH
Confidence                355999999999988887654 24 899999998876543211       00 00 11111    23568999999


Q ss_pred             HHHHHHhhccCCCCceEEEec
Q 020924          232 AEALLLAYEKAEAEGRYICTA  252 (319)
Q Consensus       232 a~~~~~~~~~~~~~~~~~~~~  252 (319)
                      |++++.+++.+....++++.-
T Consensus       202 a~~~~~~l~~~~~~~~~~~~~  222 (227)
T PRK08219        202 AKAVRFAVDAPPDAHITEVVV  222 (227)
T ss_pred             HHHHHHHHcCCCCCccceEEE
Confidence            999999998876555666553

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=3.7e-22  Score=170.17  Aligned_cols=214  Identities=12%  Similarity=0.047  Sum_probs=153.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+++||||+|+||++++++|+++|++|+++.|+.+.. ......+...+.++.++.+|++|.++++.+++     
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV-DKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            346778999999999999999999999999999998876543 22223332223468899999999999888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+|||+||......    ..+.+...+++|+.++..+++++..    .+.++||++||....++.+.         
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  155 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET---------  155 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC---------
Confidence              3799999999754321    1223466788999999988888764    35679999999765544321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCC-----ccHHHHHHHHhcCccc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVN-----TSSLVLIKLLKEGYES  217 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~  217 (319)
                                  ...|+.+|.+.+.+++.++.++   |++++.++||.+.++.......     ....+........   
T Consensus       156 ------------~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---  220 (265)
T PRK07097        156 ------------VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT---  220 (265)
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC---
Confidence                        3559999999999999887764   8999999999998875432110     0001111111111   


Q ss_pred             cCCcccccccHHHHHHHHHHhhccC
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                         ....+..++|+|+.++.++...
T Consensus       221 ---~~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        221 ---PAARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             ---CccCCcCHHHHHHHHHHHhCcc
Confidence               2334778999999999999763

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=3.5e-22  Score=169.04  Aligned_cols=220  Identities=15%  Similarity=0.160  Sum_probs=155.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++++++||||+|+||+++++.|+++|++|++++|+.... .....++...+.++.++.+|+++.+++.++++     
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKL-EEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            778889999999999999999999999999999999876432 22223333334578889999999988876654     


Q ss_pred             --CcceEEEecccCCCC-------------CCCCccchhhhhHHHHHHHHHHHHHh----C-CCCEEEEeccccccccCC
Q 020924           76 --GCNGVFHIACPAPST-------------TVPNPQMELLEPAVKGTLNVVKACLE----A-KVKRVIVVSSGVAVGLNP  135 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~Nv~~~~~l~~~~~~----~-~~~~iv~~SS~~~~~~~~  135 (319)
                        .+|+|||+||.....             ...+.+...+++|+.++..+++.+..    . ...++|++||... ++.+
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~  158 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNM  158 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCCC
Confidence              369999999854321             01122345678999999887766543    2 2347999998643 3322


Q ss_pred             CCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHh
Q 020924          136 RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK  212 (319)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~  212 (319)
                                           +...|+.+|.+.+.+++.++.+   ++++++.++|+.+.++....   ...........
T Consensus       159 ---------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~  214 (253)
T PRK08217        159 ---------------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA---MKPEALERLEK  214 (253)
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc---cCHHHHHHHHh
Confidence                                 1455999999999998888754   58999999999998875432   12233333222


Q ss_pred             cCccccCCcccccccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          213 EGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       213 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      ..      ..+.+.+++|+|+++..++......| +++++|
T Consensus       215 ~~------~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        215 MI------PVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             cC------CcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence            22      33457799999999999997654444 566654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.90  E-value=6.1e-22  Score=166.96  Aligned_cols=210  Identities=15%  Similarity=0.160  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+++||||||+||++++++|+++|++|+++.++........++++...+.++..+.+|++|.+++.++++       
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5678999999999999999999999999998865543332333444443334567788999999998887764       


Q ss_pred             CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||.....    ...+.+...+++|+.++..+++++.    +.+.++||++||.....+.+            
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  148 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF------------  148 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCC------------
Confidence            479999999975421    1122346778999999888776664    44667999999975544322            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               ....|+.+|.+.+.+++.++++   .+++++.++|+.+.++.....   ....+.......      ....
T Consensus       149 ---------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~------~~~~  210 (246)
T PRK12938        149 ---------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATI------PVRR  210 (246)
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcC------CccC
Confidence                     1456999999999888877654   489999999999988753321   122222222211      3344


Q ss_pred             cccHHHHHHHHHHhhccC
Q 020924          225 IVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~  242 (319)
                      +..++|++.++++++...
T Consensus       211 ~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        211 LGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             CcCHHHHHHHHHHHcCcc
Confidence            678999999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.5e-22  Score=169.15  Aligned_cols=212  Identities=16%  Similarity=0.106  Sum_probs=151.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++..  .+.++.++.+|++|.+++.++++     
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALA-ERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999976532 222223322  23468889999999998888765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||......    ..+.+...+++|+.++..+++++.+    .+.++||++||.....+.+.         
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  154 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG---------  154 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC---------
Confidence              5799999999643321    1233567789999999999998864    34569999999765543321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCC--ccHH-HHHHHHhcCccccC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVN--TSSL-VLIKLLKEGYESLE  219 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~--~~~~-~~~~~~~~~~~~~~  219 (319)
                                  ..+|+.+|.+.+.+++.++.++   |++++.++||.+-++.......  .... .........     
T Consensus       155 ------------~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----  217 (260)
T PRK07063        155 ------------CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ-----  217 (260)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC-----
Confidence                        3459999999999999887653   7999999999997764321100  0001 111111111     


Q ss_pred             CcccccccHHHHHHHHHHhhccC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                       ....+..++|+|.++++++...
T Consensus       218 -~~~r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        218 -PMKRIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             -CCCCCCCHHHHHHHHHHHcCcc
Confidence             2334678999999999998754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5e-22  Score=169.19  Aligned_cols=214  Identities=19%  Similarity=0.185  Sum_probs=149.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++++++||||+|+||++++++|+++|++|++++|+.+... .....+...+.++.++.+|+++.+++.++++     
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVD-AAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4566789999999999999999999999999999999865322 1222222223467888999999998887765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|++||+|+......    ..+.+...+++|+.++.++++++.+.   ..++||++||..+..+.+.          
T Consensus        84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~----------  153 (264)
T PRK07576         84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM----------  153 (264)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC----------
Confidence              3699999998543211    11223567889999999999988753   2259999999765443321          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.+|.+.+.+++.++.+   .+++++.++|+.+.+....... .............     ...+
T Consensus       154 -----------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~-~~~~~~~~~~~~~-----~~~~  216 (264)
T PRK07576        154 -----------QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARL-APSPELQAAVAQS-----VPLK  216 (264)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhc-ccCHHHHHHHHhc-----CCCC
Confidence                       456999999999999987654   4799999999988743211000 0001111111111     1345


Q ss_pred             ccccHHHHHHHHHHhhccC
Q 020924          224 MIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+..++|+|++++.++...
T Consensus       217 ~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        217 RNGTKQDIANAALFLASDM  235 (264)
T ss_pred             CCCCHHHHHHHHHHHcChh
Confidence            5788999999999999753

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-22  Score=170.09  Aligned_cols=214  Identities=11%  Similarity=0.063  Sum_probs=150.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+..+. .....++.. .+.++.++.+|++|.++++++++    
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENL-KKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999975532 112222221 13468899999999999888775    


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++||+||......    ..+.++..+++|+.+...+++++.    +.+.++||++||.....+.+.         
T Consensus        83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~---------  153 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPN---------  153 (263)
T ss_pred             hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCc---------
Confidence              4799999999653321    123356788999888777776664    345579999999765543321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC--------CccHHHHHHHHhcC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV--------NTSSLVLIKLLKEG  214 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~--------~~~~~~~~~~~~~~  214 (319)
                                  ...|+.+|.+.+.+.+.++.+   +|++++.+.||.+.++......        ............. 
T Consensus       154 ------------~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  220 (263)
T PRK08339        154 ------------IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP-  220 (263)
T ss_pred             ------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc-
Confidence                        345999999999988888765   4899999999999776321000        0001111111111 


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccC
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                           .+...+..++|+|.++++++...
T Consensus       221 -----~p~~r~~~p~dva~~v~fL~s~~  243 (263)
T PRK08339        221 -----IPLGRLGEPEEIGYLVAFLASDL  243 (263)
T ss_pred             -----CCcccCcCHHHHHHHHHHHhcch
Confidence                 13445788999999999999753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.90  E-value=6.9e-22  Score=167.30  Aligned_cols=211  Identities=14%  Similarity=0.074  Sum_probs=152.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+........+.   .....+.++.+|++|.+++..+++     
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT---ALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH---hcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            457789999999999999999999999999999887754322222222   223467889999999998888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||......    ..+.+...+++|+.++.++++++.+.    + .+++|++||..++.+.+.        
T Consensus        83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  154 (253)
T PRK08993         83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR--------  154 (253)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC--------
Confidence              4799999999753321    12335778999999999999988643    2 258999999876654321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.+|.+.+.+++.++.+   +|++++.++||.+.++..... ..............      +
T Consensus       155 -------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~-~~~~~~~~~~~~~~------p  214 (253)
T PRK08993        155 -------------VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL-RADEQRSAEILDRI------P  214 (253)
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh-ccchHHHHHHHhcC------C
Confidence                         234999999999988888765   489999999999987753211 00011111111111      2


Q ss_pred             ccccccHHHHHHHHHHhhccC
Q 020924          222 LRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ...+..++|+|+++++++...
T Consensus       215 ~~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        215 AGRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             CCCCcCHHHHHHHHHHHhCcc
Confidence            345788999999999999754

>PRK08643 acetoin reductase; Validated

Probab=99.90  E-value=8.2e-22  Score=167.18  Aligned_cols=210  Identities=22%  Similarity=0.214  Sum_probs=147.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... ....++...+.++.++.+|+++++++.++++       ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQ-AAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999999765321 2222232223567889999999998887665       47


Q ss_pred             ceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |+||||||.......    .+.+...+++|+.++..+++++.+.    + ..++|++||...+++.++            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  148 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE------------  148 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC------------
Confidence            999999986543211    1223567889999998888777643    2 358999999876654431            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC-------ccHHH-HHHHHhcCccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN-------TSSLV-LIKLLKEGYES  217 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~-------~~~~~-~~~~~~~~~~~  217 (319)
                               ...|+.+|.+.+.+++.++.+   .|++++.++|+.+.++.......       ....+ .......    
T Consensus       149 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  215 (256)
T PRK08643        149 ---------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD----  215 (256)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc----
Confidence                     355999999999888887754   48999999999998874321100       00000 0111110    


Q ss_pred             cCCcccccccHHHHHHHHHHhhccC
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                        .....+..++|+|.++++++...
T Consensus       216 --~~~~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        216 --ITLGRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             --CCCCCCcCHHHHHHHHHHHhCcc
Confidence              02345678999999999999754

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=8.3e-22  Score=164.86  Aligned_cols=200  Identities=18%  Similarity=0.174  Sum_probs=143.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------C
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------G   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   76 (319)
                      |++|+|+||||||+||++++++|+++|++|+++.|+....            ...+++.+|++|.+++..+++      +
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   68 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------------FPGELFACDLADIEQTAATLAQINEIHP   68 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------------cCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999986531            112578899999998887765      5


Q ss_pred             cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|+|||++|.......    .+.+...+++|+.++.++.+++.    +.+.++||++||... ++.+.            
T Consensus        69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~------------  135 (234)
T PRK07577         69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALD------------  135 (234)
T ss_pred             CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCC------------
Confidence            7999999997554321    12235678899999888877765    356779999999653 33221            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.+|.+.+.+++.++.+   +|++++++|||.+.++....................      ....+
T Consensus       136 ---------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~  200 (234)
T PRK07577        136 ---------RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI------PMRRL  200 (234)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC------CCCCC
Confidence                     355999999999888877654   489999999999988753221111111111111111      22235


Q ss_pred             ccHHHHHHHHHHhhccC
Q 020924          226 VDVRDVAEALLLAYEKA  242 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~  242 (319)
                      ..++|+|.+++.++..+
T Consensus       201 ~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        201 GTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             cCHHHHHHHHHHHhCcc
Confidence            68999999999999765

>PRK12743 oxidoreductase; Provisional

Probab=99.90  E-value=5.7e-22  Score=168.14  Aligned_cols=219  Identities=14%  Similarity=0.083  Sum_probs=153.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +++|+||||+|+||++++++|+++|++|+++.|+..........++...+.++.++.+|++|.++++.+++       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999887654432222233333334578899999999998877664       47


Q ss_pred             ceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhCC-----CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEAK-----VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~~-----~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |+|||++|.......    .+.+...+++|+.++.++++++.+..     .++||++||.....+.+             
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-------------  148 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP-------------  148 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC-------------
Confidence            999999997543211    12246678999999999999887542     25899999975443221             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                              +...|+.+|.+.+.+++.++.+   ++++++.++||.++++......   .........+.      ....+
T Consensus       149 --------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~------~~~~~  211 (256)
T PRK12743        149 --------GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD---SDVKPDSRPGI------PLGRP  211 (256)
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC---hHHHHHHHhcC------CCCCC
Confidence                    1456999999999998887764   4799999999999987543211   11111111111      22235


Q ss_pred             ccHHHHHHHHHHhhccCC--CCce-EEEecc
Q 020924          226 VDVRDVAEALLLAYEKAE--AEGR-YICTAH  253 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~  253 (319)
                      .+++|++.++.+++....  ..|. +.+.|.
T Consensus       212 ~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        212 GDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            689999999999987543  2353 455543

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.9e-22  Score=168.07  Aligned_cols=222  Identities=15%  Similarity=0.163  Sum_probs=155.2

Q ss_pred             CC-CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MA-LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |. +++|+++||||||+||++++++|+++|++|++++|+..... .....+   +.++.++.+|++|.+++.++++    
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGA-AVAASL---GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            44 67899999999999999999999999999999999865321 111221   3468899999999998887765    


Q ss_pred             ---CcceEEEecccCCCC---CCCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 ---GCNGVFHIACPAPST---TVPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~---~~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                         .+|++|||||.....   ...+.+...+++|+.++..+++++.+.   +.++||++||.....+.+.          
T Consensus        77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------  146 (261)
T PRK08265         77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG----------  146 (261)
T ss_pred             HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC----------
Confidence               479999999964322   112234677899999999999988653   3468999999876654432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.+|.+.+.+++.++.+   +|++++.++|+.+.++..................     ......
T Consensus       147 -----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~-----~~~p~~  210 (261)
T PRK08265        147 -----------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAA-----PFHLLG  210 (261)
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhc-----ccCCCC
Confidence                       345999999999999888765   4899999999998776422110000000111100     011234


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      .+..++|+|+++++++.....  .| .+.+.|
T Consensus       211 r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        211 RVGDPEEVAQVVAFLCSDAASFVTGADYAVDG  242 (261)
T ss_pred             CccCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence            567899999999999975432  34 344544

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.6e-22  Score=168.06  Aligned_cols=208  Identities=16%  Similarity=0.141  Sum_probs=148.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+|+||||||+||++++++|+++|++|++++|+... .......+...+.++.++.+|++|.+++.++++       .+|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG-GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999987653 222333333334578899999999998887764       589


Q ss_pred             eEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           79 GVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +|||+||........    +.++..+++|+.++.++.+.+    ++.+.++||++||..++.+.+.              
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------  145 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA--------------  145 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC--------------
Confidence            999999975432111    223456789998888877765    4556779999999766543321              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                             ...|+.+|.+.+.+.+.++.+   .|+++++++|+.+.++............. ......      ....+++
T Consensus       146 -------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~------~~~~~~~  211 (270)
T PRK05650        146 -------MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMK-AQVGKL------LEKSPIT  211 (270)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHH-HHHHHH------hhcCCCC
Confidence                   456999999988888877665   38999999999998875432211111111 111000      1123579


Q ss_pred             HHHHHHHHHHhhccC
Q 020924          228 VRDVAEALLLAYEKA  242 (319)
Q Consensus       228 v~D~a~~~~~~~~~~  242 (319)
                      ++|+|+.++.++++.
T Consensus       212 ~~~vA~~i~~~l~~~  226 (270)
T PRK05650        212 AADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            999999999999864

>PRK06196 oxidoreductase; Provisional

Probab=99.90  E-value=8.1e-22  Score=172.13  Aligned_cols=222  Identities=19%  Similarity=0.144  Sum_probs=148.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+|+||||||+||++++++|+++|++|++++|+.... .....++    ..+.++.+|++|.++++++++       
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~-~~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVA-REALAGI----DGVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh----hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            5678999999999999999999999999999999986532 1222222    247889999999998887764       


Q ss_pred             CcceEEEecccCCCC--CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           76 GCNGVFHIACPAPST--TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~--~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      .+|+||||||.....  ...+.++..+++|+.++..+++.+.    +.+.++||++||.....+...+  .. .....+ 
T Consensus        99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~--~~-~~~~~~-  174 (315)
T PRK06196         99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRW--DD-PHFTRG-  174 (315)
T ss_pred             CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCc--cc-cCccCC-
Confidence            479999999965332  1123346788999999777776554    4455699999996543321110  00 000111 


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc-ccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL-RMI  225 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  225 (319)
                           ..+...|+.||.+.+.+++.++++   +|+++++++||.+.++........ ...........    +... ..+
T Consensus       175 -----~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~  244 (315)
T PRK06196        175 -----YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE-EQVALGWVDEH----GNPIDPGF  244 (315)
T ss_pred             -----CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh-hhhhhhhhhhh----hhhhhhhc
Confidence                 122467999999999988887654   489999999999998864322100 00000000000    0001 125


Q ss_pred             ccHHHHHHHHHHhhccCC
Q 020924          226 VDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~  243 (319)
                      ..++|.|..+++++..+.
T Consensus       245 ~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        245 KTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             CCHhHHHHHHHHHhcCCc
Confidence            688999999999997544

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.1e-21  Score=166.36  Aligned_cols=220  Identities=14%  Similarity=0.162  Sum_probs=150.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      .+++|+++||||+|+||++++++|+++|++|+++.|+.... ...+.   .  .++.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~-~~~l~---~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE-AKELR---E--KGVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHH---h--CCCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            35679999999999999999999999999999887754322 11221   1  257889999999999888765      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||......    ..+.+...+++|+.++..+.+.+.    +.+.++||++||..++....           
T Consensus        78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------  146 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA-----------  146 (255)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC-----------
Confidence             4799999998753221    122346778999999766655554    34556999999976553211           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccccCCcc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                               .....|+.||.+.+.+++.++.+   +|++++.++|+.+.++...... ..............     ...
T Consensus       147 ---------~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~  212 (255)
T PRK06463        147 ---------EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNK-----TVL  212 (255)
T ss_pred             ---------CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhC-----CCc
Confidence                     01355999999999999988765   4899999999999766432110 00000111111111     134


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+..++|+|+++++++.....  .| .+.+.+
T Consensus       213 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        213 KTTGKPEDIANIVLFLASDDARYITGQVIVADG  245 (255)
T ss_pred             CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence            5578899999999999875432  34 445554

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.6e-22  Score=169.49  Aligned_cols=214  Identities=19%  Similarity=0.152  Sum_probs=144.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-CcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-GCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi~~   83 (319)
                      +++||||||||+||++++++|+++|++|++++|+..... .........+.++.++.+|++|.+++..++. ++|+||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVT-ALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            468999999999999999999999999999999754321 1111112223468899999999999998887 79999999


Q ss_pred             cccCCCCCC----CCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           84 ACPAPSTTV----PNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        84 a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      ||.......    .+.+...+++|+.++.++.+.+    ++.+.++||++||..+..+.+                    
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~--------------------  140 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGP--------------------  140 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCC--------------------
Confidence            996543211    1123456889999888776655    345668999999976544322                    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRD  230 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D  230 (319)
                       ....|+.+|.+.|.+++.++.+   .|++++++||+.+..+...........+...  ......  .+.....++.++|
T Consensus       141 -~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  217 (257)
T PRK09291        141 -FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDP--ARNFTDPEDLAFPLEQFDPQE  217 (257)
T ss_pred             -CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcch--hhHHHhhhhhhccccCCCHHH
Confidence             1355999999999988876543   5899999999987554321110000000000  000000  1112335578999


Q ss_pred             HHHHHHHhhccC
Q 020924          231 VAEALLLAYEKA  242 (319)
Q Consensus       231 ~a~~~~~~~~~~  242 (319)
                      +++.++.++..+
T Consensus       218 ~~~~~~~~l~~~  229 (257)
T PRK09291        218 MIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHhcCC
Confidence            999888887654

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.2e-22  Score=167.90  Aligned_cols=217  Identities=18%  Similarity=0.165  Sum_probs=150.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+....          ...++.++.+|++|.+++..+++       
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            5679999999999999999999999999999999976421          12457889999999988876553       


Q ss_pred             CcceEEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      .+|+|||+||.....      ...+.+...+++|+.++.++++++.    +.+.++||++||.....+.+          
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------  146 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP----------  146 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC----------
Confidence            579999999854211      1123346778999999988877664    34557899999976543211          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhcC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKEG  214 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~~  214 (319)
                                .....|+.+|.+.+.+++.++.+   .|+++++++|+.+.++.......        .............
T Consensus       147 ----------~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T PRK06523        147 ----------ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL  216 (260)
T ss_pred             ----------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence                      01456999999999999888765   38999999999999875321000        0000000110000


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                         .+.....+..++|+|+++++++....  ..| .+.+.|
T Consensus       217 ---~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg  254 (260)
T PRK06523        217 ---GGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDG  254 (260)
T ss_pred             ---ccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecC
Confidence               01133456789999999999997532  233 455554

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-21  Score=168.03  Aligned_cols=219  Identities=17%  Similarity=0.210  Sum_probs=153.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh------HHHHHhhhccCCCeEEEEccCCChhhHHHHh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK------NARLYELEKASENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      |.|++++++||||+|+||++++++|+++|++|++++|+.+...      ....+++...+.++.++.+|+++.+++..++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            5677899999999999999999999999999999999764311      1111222223456888999999999888776


Q ss_pred             c-------CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCC
Q 020924           75 V-------GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        75 ~-------~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                      +       .+|+|||+||.......    .+.+...+++|+.++.++++++...    +..++|++||.....+.  +  
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~--  157 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK--W--  157 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc--c--
Confidence            5       57999999996543211    1223667889999999999999753    34589999985432211  0  


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCc-ccCCCCCCCCCccHHHHHHHHhcCc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNL-VLGPLLQSKVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~  215 (319)
                                     ..+...|+.||.+.|.+++.++.++   +++++.+.|+. +.++..           .....+. 
T Consensus       158 ---------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~-----------~~~~~~~-  210 (273)
T PRK08278        158 ---------------FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAV-----------RNLLGGD-  210 (273)
T ss_pred             ---------------cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHH-----------Hhccccc-
Confidence                           0114569999999999999887654   89999999984 433211           1111010 


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC--CCceEEEeccc
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE--AEGRYICTAHM  254 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~~  254 (319)
                          .....+..++|+|++++.++....  ..|.+++.++.
T Consensus       211 ----~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~~~  247 (273)
T PRK08278        211 ----EAMRRSRTPEIMADAAYEILSRPAREFTGNFLIDEEV  247 (273)
T ss_pred             ----ccccccCCHHHHHHHHHHHhcCccccceeEEEeccch
Confidence                122346799999999999998643  24455554443

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.90  E-value=6.6e-22  Score=166.61  Aligned_cols=219  Identities=20%  Similarity=0.216  Sum_probs=153.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++++++||||||+||++++++|+++|+.|++..|+.+.... .....   +.++.++.+|+++.+++.++++     
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEA-LAAEL---GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45778999999999999999999999999999888877543211 11111   2467889999999998887754     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||...+++.+.         
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------  148 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG---------  148 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC---------
Confidence              4799999999754321    1123466789999999999888753    35679999999776665432         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+++.++++   .++++++++|+.+.++.....   ... ......+.     ...
T Consensus       149 ------------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~-~~~~~~~~-----~~~  207 (245)
T PRK12936        149 ------------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL---NDK-QKEAIMGA-----IPM  207 (245)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc---ChH-HHHHHhcC-----CCC
Confidence                        344999999988888777654   479999999998876543211   111 11111110     123


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ..+.+++|+++++.+++.....  .| .+++.+.
T Consensus       208 ~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        208 KRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            4467899999999988865432  34 4565543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.90  E-value=7e-22  Score=165.77  Aligned_cols=190  Identities=22%  Similarity=0.151  Sum_probs=144.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---C
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---G   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~   76 (319)
                      |++++++|+||||||+||++++++|+++|+ +|++++|+..+...        .+.+++++.+|++|.+++.++++   .
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEAASD   73 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHhcCC
Confidence            567788999999999999999999999999 99999998653211        23578999999999999988876   4


Q ss_pred             cceEEEecccCC-CCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           77 CNGVFHIACPAP-STT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        77 ~d~vi~~a~~~~-~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      +|+|||+||... ...    ..+.+...+++|+.++.++++++.+    .+.++||++||...+.+.+            
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~------------  141 (238)
T PRK08264         74 VTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP------------  141 (238)
T ss_pred             CCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC------------
Confidence            799999999732 211    1122356788999999999998763    4567899999976654332            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               +...|+.+|.+.+.+++.++.+   .+++++++||+.+.++.....                      ...
T Consensus       142 ---------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~----------------------~~~  190 (238)
T PRK08264        142 ---------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL----------------------DAP  190 (238)
T ss_pred             ---------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC----------------------CcC
Confidence                     1456999999999998887665   389999999999987642211                      001


Q ss_pred             cccHHHHHHHHHHhhcc
Q 020924          225 IVDVRDVAEALLLAYEK  241 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~  241 (319)
                      .+.++|+++.++..+..
T Consensus       191 ~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        191 KASPADVARQILDALEA  207 (238)
T ss_pred             CCCHHHHHHHHHHHHhC
Confidence            46777888888777764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=9.7e-22  Score=165.58  Aligned_cols=217  Identities=17%  Similarity=0.191  Sum_probs=152.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+++||||+|+||++++++|+++|++|++++|+...............+.++.++.+|++|.+++.++++       .+|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999985422222222222223568899999999998887764       479


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      ++||++|......    ..+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+.              
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------  148 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG--------------  148 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC--------------
Confidence            9999999654321    12224667889999999986655    4456679999999766543321              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                             ...|+.+|.+.+.+++.++.+   .++++++++|+.+.++.....   ............      ....+..
T Consensus       149 -------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~~~~~~~~~~------~~~~~~~  212 (245)
T PRK12824        149 -------QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM---GPEVLQSIVNQI------PMKRLGT  212 (245)
T ss_pred             -------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc---CHHHHHHHHhcC------CCCCCCC
Confidence                   345999999999888887653   489999999999988753322   111111212111      2345678


Q ss_pred             HHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          228 VRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ++|+++++..++.....  .| .+++++
T Consensus       213 ~~~va~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        213 PEEIAAAVAFLVSEAAGFITGETISING  240 (245)
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEECC
Confidence            99999999988865322  23 455544

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-21  Score=168.68  Aligned_cols=203  Identities=16%  Similarity=0.143  Sum_probs=147.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.|++++|+||||+|+||++++++|+++|++|++++|+.+.. ....+++...+.++.++.+|++|.+++.++++     
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l-~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLL-DAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346778999999999999999999999999999999986432 12222232223467889999999998888776     


Q ss_pred             --CcceEEEecccCCCCCCC------CccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPSTTVP------NPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~------~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++|||||........      +.+...+++|+.++.++++++.    +.+.++||++||.+.+.+..        
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  186 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS--------  186 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--------
Confidence              689999999975432211      1224578899999888888765    45667999999965432110        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                  ...+.|+.+|.+.+.+++.++.+   ++++++.++||.+-++......           ..       
T Consensus       187 ------------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-----------~~-------  236 (293)
T PRK05866        187 ------------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-----------AY-------  236 (293)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----------cc-------
Confidence                        01356999999999888887654   4899999999988776432110           00       


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .....+.++++|+.++.++++.
T Consensus       237 ~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        237 DGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             cCCCCCCHHHHHHHHHHHHhcC
Confidence            0112468999999999999864

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-21  Score=170.73  Aligned_cols=210  Identities=16%  Similarity=0.122  Sum_probs=151.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++++|+||||||+||++++++|+++|++|++++|+.+.. ....+++...+..+.++.+|++|.++++.+++     
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l-~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEAL-QAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            346678999999999999999999999999999999976532 22233333334567888999999999888763     


Q ss_pred             --CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||........    +.+...+++|+.++.++++++.    +.+..+||++||..++.+.+.         
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~---------  152 (330)
T PRK06139         82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY---------  152 (330)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC---------
Confidence              579999999965433211    2235679999999999888774    345569999999776544321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  ...|+.||.+.+.+.+.++.+    .+++++.+.|+.+.++.......        . .+...   ..
T Consensus       153 ------------~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--------~-~~~~~---~~  208 (330)
T PRK06139        153 ------------AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN--------Y-TGRRL---TP  208 (330)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc--------c-ccccc---cC
Confidence                        456999999877777766543    37999999999998885322100        0 00000   11


Q ss_pred             ccccccHHHHHHHHHHhhccCCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ...+.+++|+|++++.++.+++.
T Consensus       209 ~~~~~~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        209 PPPVYDPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CCCCCCHHHHHHHHHHHHhCCCC
Confidence            22367999999999999987643

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.90  E-value=8.8e-22  Score=172.80  Aligned_cols=206  Identities=20%  Similarity=0.153  Sum_probs=147.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++++|+||||||+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.++++++++       
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l-~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL-EALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            4568999999999999999999999999999999975532 22223333334578889999999999987764       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++||+||......    ..+.+...+++|+.+..++++.+.    +.+.++||++||..++.+.+.           
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~-----------  153 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL-----------  153 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc-----------
Confidence            5799999999653321    112235678899888777666554    445679999999876654321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                .+.|+.+|.+.+.+++.++.+     .+++++.++|+.+.++...        ........    .....
T Consensus       154 ----------~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~--------~~~~~~~~----~~~~~  211 (334)
T PRK07109        154 ----------QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD--------WARSRLPV----EPQPV  211 (334)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh--------hhhhhccc----cccCC
Confidence                      456999999998888776543     3699999999999776421        01111111    11123


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+..++|+|+++++++.++
T Consensus       212 ~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        212 PPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCCCCHHHHHHHHHHHHhCC
Confidence            35679999999999999875

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.8e-21  Score=164.60  Aligned_cols=212  Identities=22%  Similarity=0.197  Sum_probs=150.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      .|++++++||||+|+||++++++|+++|++|++++|+...  ......+.....++.++.+|+++.+++.++++      
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI--EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH--HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3667999999999999999999999999999999987642  12222222223467889999999998888765      


Q ss_pred             -CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHh----CCCCEEEEecccccc-ccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAV-GLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~-~~~~~~~~~~~~~E  145 (319)
                       .+|+|||+||........    +.+...+++|+.++.++++++.+    .+.++||++||.... .+.+          
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------  150 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADP----------  150 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCC----------
Confidence             479999999975432211    12345688999999999998764    345689999996542 1111          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCC-----CCccHHHHHHHHhcCccc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSK-----VNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~  217 (319)
                                 ....|+.+|.+.+.+++.++.++   +++++.++||.+.++.....     .......+..+..+.   
T Consensus       151 -----------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (263)
T PRK08226        151 -----------GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAI---  216 (263)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccC---
Confidence                       13459999999999999887653   79999999999988743211     011122223332221   


Q ss_pred             cCCcccccccHHHHHHHHHHhhccC
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                         ....+..++|+|+++++++...
T Consensus       217 ---p~~~~~~~~~va~~~~~l~~~~  238 (263)
T PRK08226        217 ---PLRRLADPLEVGELAAFLASDE  238 (263)
T ss_pred             ---CCCCCCCHHHHHHHHHHHcCch
Confidence               2345679999999999998643

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.9e-22  Score=166.55  Aligned_cols=207  Identities=18%  Similarity=0.159  Sum_probs=149.5

Q ss_pred             CCC-CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MAL-EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |.+ +||+++||||+|+||++++++|+++|++|++++|+.++. ......+...+.++.++.+|++|.+++..+++    
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE   79 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            443 357899999999999999999999999999999976532 22222232233578899999999998877765    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         ++|+|||+||......    ..+.+...+++|+.++.++++.+.    +.+.+++|++||...+.+.+         
T Consensus        80 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  150 (241)
T PRK07454         80 QFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP---------  150 (241)
T ss_pred             HcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC---------
Confidence               4799999998654321    112346678899999988887764    34567999999976654322         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +...|+.+|.+.+.+.+.++++   .|++++++||+.+.++..... ..     ...       .  .
T Consensus       151 ------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~-~~-----~~~-------~--~  203 (241)
T PRK07454        151 ------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE-TV-----QAD-------F--D  203 (241)
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc-cc-----ccc-------c--c
Confidence                        1456999999999888877543   489999999999987653211 00     000       0  1


Q ss_pred             ccccccHHHHHHHHHHhhccCCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ...++.++|+|++++.++..+..
T Consensus       204 ~~~~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        204 RSAMLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             cccCCCHHHHHHHHHHHHcCCcc
Confidence            12357999999999999987643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.89  E-value=9.7e-22  Score=164.92  Aligned_cols=215  Identities=19%  Similarity=0.154  Sum_probs=153.3

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-------cceE
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-------CNGV   80 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~d~v   80 (319)
                      |+|||++|+||++++++|+++|++|++++|+..+........+...+..+.++.+|++|.+++.+++++       +|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999998763322223333333344688999999999988887653       6999


Q ss_pred             EEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCCcc
Q 020924           81 FHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE  152 (319)
Q Consensus        81 i~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  152 (319)
                      ||++|......    ..+.+...+++|+.++.++++++.+    .+.+++|++||...+++.+.                
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~----------------  144 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG----------------  144 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC----------------
Confidence            99999754321    1122366788999999999999875    35569999999776665431                


Q ss_pred             ccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHH
Q 020924          153 YCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVR  229 (319)
Q Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  229 (319)
                           ...|+.+|.+.+.+++.++++   .++.+++++|+.+.++.....   ............      ....+.+++
T Consensus       145 -----~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~~~~  210 (239)
T TIGR01830       145 -----QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL---SEKVKKKILSQI------PLGRFGTPE  210 (239)
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc---ChHHHHHHHhcC------CcCCCcCHH
Confidence                 345999999999888887654   489999999998876543211   122222222221      233467899


Q ss_pred             HHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          230 DVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       230 D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      |++++++.++.....  .+ .|++++
T Consensus       211 ~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       211 EVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HHHHHHHHHhCcccCCcCCCEEEeCC
Confidence            999999988855322  33 566654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.9e-22  Score=166.36  Aligned_cols=193  Identities=20%  Similarity=0.182  Sum_probs=145.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC----cceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG----CNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~v   80 (319)
                      |++++||||||+||++++++|+++|++|++++|+...  ...+..   ...++.++.+|++|.+++.+++++    +|.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~   75 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV--LDELHT---QSANIFTLAFDVTDHPGTKAALSQLPFIPELW   75 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH--HHHHHH---hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence            3689999999999999999999999999999997542  222221   124688899999999999998864    5899


Q ss_pred             EEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           81 FHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        81 i~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                      ||+||......    ..+.+..++++|+.++.++++++...  ..+++|++||.....+.+.                  
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~------------------  137 (240)
T PRK06101         76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR------------------  137 (240)
T ss_pred             EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC------------------
Confidence            99998542211    11223568999999999999999864  3358999999765554321                  


Q ss_pred             ccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHH
Q 020924          155 RTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDV  231 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  231 (319)
                         ...|+.+|.+.+.+++.++.   .+|++++.+|||.++++......               .    .....+.++|+
T Consensus       138 ---~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~---------------~----~~~~~~~~~~~  195 (240)
T PRK06101        138 ---AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT---------------F----AMPMIITVEQA  195 (240)
T ss_pred             ---CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC---------------C----CCCcccCHHHH
Confidence               34599999999999887763   35899999999999987533210               0    01124689999


Q ss_pred             HHHHHHhhccC
Q 020924          232 AEALLLAYEKA  242 (319)
Q Consensus       232 a~~~~~~~~~~  242 (319)
                      |+.++..++..
T Consensus       196 a~~i~~~i~~~  206 (240)
T PRK06101        196 SQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHhcC
Confidence            99999999875

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.89  E-value=1.5e-21  Score=172.03  Aligned_cols=265  Identities=19%  Similarity=0.161  Sum_probs=181.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC---CeEEEEEcCCChh-hHHHHHhh---------h----ccCCCeEEEEccCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD---YFVHGTAREPSDE-KNARLYEL---------E----KASENLKLFKADLL   65 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~-~~~~~~~~---------~----~~~~~~~~~~~Dl~   65 (319)
                      .++|+|+|||||||+|..+++.|++.-   .+++++.|..... ...++...         .    ....++..+.||++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            367999999999999999999999742   4789999976543 22222221         1    11357888999997


Q ss_pred             Ch------hhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCC
Q 020924           66 DY------DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWP  138 (319)
Q Consensus        66 ~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~  138 (319)
                      ++      .++..+.+++|+|||+||....   .++.+....+|..|++++++.|++. ..+-++|+||+++. ...+.-
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i  165 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHI  165 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccc
Confidence            53      5666677899999999998766   3667889999999999999999987 67899999997655 222111


Q ss_pred             CCcccCCCC--C------------------CCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCC
Q 020924          139 KGQIMDETC--W------------------SDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQS  198 (319)
Q Consensus       139 ~~~~~~E~~--~------------------~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~  198 (319)
                      ...+..+..  +                  ..+.......+.|.-+|..+|+++...+.  +++++|+||+.|......+
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCceeccccCC
Confidence            111111111  0                  11111112246799999999999999865  7999999999998866554


Q ss_pred             CCCcc------HHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhhcc--CCC----CceEEEec---ccCCHHHH
Q 020924          199 KVNTS------SLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAYEK--AEA----EGRYICTA---HMIRARDL  260 (319)
Q Consensus       199 ~~~~~------~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~--~~~----~~~~~~~~---~~~s~~e~  260 (319)
                      ...++      ..++...-+|..-.   ..+..-|+|++|.++.+++.+.-.  ...    ..+|+++.   .++++.++
T Consensus       244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~  323 (467)
T KOG1221|consen  244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDF  323 (467)
T ss_pred             CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHH
Confidence            42221      11111112222111   234778999999999999866521  111    23797763   79999999


Q ss_pred             HHHHHHhCCCCCC
Q 020924          261 VDKLKSLYPNYNY  273 (319)
Q Consensus       261 ~~~~~~~~g~~~~  273 (319)
                      ++...+.+.+.++
T Consensus       324 ~e~~~~~~~~~Pl  336 (467)
T KOG1221|consen  324 IELALRYFEKIPL  336 (467)
T ss_pred             HHHHHHhcccCCc
Confidence            9999998764443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.89  E-value=1.5e-21  Score=164.71  Aligned_cols=205  Identities=18%  Similarity=0.163  Sum_probs=144.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+|+||||||+||++++++|+++|++|++++|++.+.  ..+...  .+.++.++.+|++|.+++..+++       ++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL--QELKDE--LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHH--hccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999976532  222111  12468889999999998887664       589


Q ss_pred             eEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           79 GVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        79 ~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      +|||+||.....     ...+.+..++++|+.++..+++.+.    +.+.+++|++||.....+.+              
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------  142 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA--------------  142 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCC--------------
Confidence            999999864211     1122346778999999777776664    45667999999976543221              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC-CCccHHHHHHHHhcCccccCCccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                             ..+.|+.+|.+.+.+.+.++.+   .++++++++||.+.|+..... ............         ....+
T Consensus       143 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~  206 (248)
T PRK10538        143 -------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---------QNTVA  206 (248)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc---------cccCC
Confidence                   1456999999999999888654   479999999999986543211 000000000100         11245


Q ss_pred             ccHHHHHHHHHHhhccCCC
Q 020924          226 VDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~  244 (319)
                      +.++|+|+++++++..+..
T Consensus       207 ~~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        207 LTPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             CCHHHHHHHHHHHhcCCCc
Confidence            7999999999999976543

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=164.37  Aligned_cols=203  Identities=21%  Similarity=0.178  Sum_probs=148.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.|++++|+||||||+||++++++|+++|++|++++|++... ......+... .+++++.+|++|.+++..+++     
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKEL-EEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHH-HHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            446678999999999999999999999999999999976432 2222333222 568899999999998887765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|+|||+++......    ..+.+...+++|+.++.++++++.+.   +.+++|++||...+.+..           
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------  148 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA-----------  148 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC-----------
Confidence              5899999998654321    11223567899999999999888753   456899999976543221           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                ....|+.+|.+.+.+++.++.+   .|++++++||+.+.++......   .               ....
T Consensus       149 ----------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~---~---------------~~~~  200 (237)
T PRK07326        149 ----------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP---S---------------EKDA  200 (237)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc---c---------------hhhh
Confidence                      1455999999998888877533   5899999999999776432110   0               0001


Q ss_pred             ccccHHHHHHHHHHhhccCCC
Q 020924          224 MIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ..+.++|+++.++.++..+..
T Consensus       201 ~~~~~~d~a~~~~~~l~~~~~  221 (237)
T PRK07326        201 WKIQPEDIAQLVLDLLKMPPR  221 (237)
T ss_pred             ccCCHHHHHHHHHHHHhCCcc
Confidence            137899999999999987643

>PRK12742 oxidoreductase; Provisional

Probab=99.89  E-value=2.7e-21  Score=162.05  Aligned_cols=207  Identities=13%  Similarity=0.070  Sum_probs=145.9

Q ss_pred             CC-CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---C
Q 020924            1 MA-LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---G   76 (319)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~   76 (319)
                      |. |++|+||||||+|+||++++++|+++|++|+++.|+..+.......+     .+++++.+|++|.+.+.+.++   .
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~   75 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE-----TGATAVQTDSADRDAVIDVVRKSGA   75 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-----hCCeEEecCCCCHHHHHHHHHHhCC
Confidence            44 66799999999999999999999999999988876543221111111     135678899999988877765   4


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +|++||+||......    ..+.++..+++|+.++.+++..+.+.  ..+++|++||.......                
T Consensus        76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------------  139 (237)
T PRK12742         76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP----------------  139 (237)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC----------------
Confidence            899999998654321    12234778999999999998777654  34699999996542100                


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                          ..+...|+.+|.+.+.+++.++.+   .++++++++||.+.++.....    ...........      ....+..
T Consensus       140 ----~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~------~~~~~~~  205 (237)
T PRK12742        140 ----VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN----GPMKDMMHSFM------AIKRHGR  205 (237)
T ss_pred             ----CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc----cHHHHHHHhcC------CCCCCCC
Confidence                011456999999999999887665   479999999999987753221    01111111111      2345679


Q ss_pred             HHHHHHHHHHhhccC
Q 020924          228 VRDVAEALLLAYEKA  242 (319)
Q Consensus       228 v~D~a~~~~~~~~~~  242 (319)
                      ++|++.++.+++...
T Consensus       206 p~~~a~~~~~l~s~~  220 (237)
T PRK12742        206 PEEVAGMVAWLAGPE  220 (237)
T ss_pred             HHHHHHHHHHHcCcc
Confidence            999999999998754

>PRK09242 tropinone reductase; Provisional

Probab=99.89  E-value=2.4e-21  Score=164.45  Aligned_cols=213  Identities=14%  Similarity=0.137  Sum_probs=153.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++...  +.++.++.+|+++.+++..+++   
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADAL-AQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999976532 1222222221  3467889999999988777654   


Q ss_pred             ----CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ----GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                          .+|+|||+||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||...+.+.+.       
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------  156 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS-------  156 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC-------
Confidence                479999999964321    11223466789999999999988863    45579999999766543321       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++....... ............      
T Consensus       157 --------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~------  215 (257)
T PRK09242        157 --------------GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVIERT------  215 (257)
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHHhcC------
Confidence                          355999999999999887654   48999999999998886432211 122222222221      


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+..++|++.++..++...
T Consensus       216 ~~~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        216 PMRRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             CCCCCcCHHHHHHHHHHHhCcc
Confidence            2334568899999999998753

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=165.83  Aligned_cols=225  Identities=13%  Similarity=0.118  Sum_probs=149.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh---hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE---KNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +++|+++||||+|+||++++++|+++|++|+++.++....   .....+.+...+.++.++.+|+++.+++.++++    
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999987777653321   112222232223468889999999999887764    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEe-ccccccccCCCCCCCcccCC
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVV-SSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~-SS~~~~~~~~~~~~~~~~~E  145 (319)
                         .+|++||+||......    ..+.+...+++|+.++..+++++.+.  ..++++++ ||....+ .+          
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-~~----------  154 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-TP----------  154 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-CC----------
Confidence               4799999999743221    11224667899999999999999764  22467766 4432221 11          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 ..+.|+.+|.+.|.+++.++.++   +++++.++||.+.++...+... .. ... .........+-..
T Consensus       155 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~-~~~-~~~~~~~~~~~~~  220 (257)
T PRK12744        155 -----------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AE-AVA-YHKTAAALSPFSK  220 (257)
T ss_pred             -----------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cc-hhh-ccccccccccccc
Confidence                       13559999999999999987764   7999999999998764322110 00 000 0000000001122


Q ss_pred             cccccHHHHHHHHHHhhccCCC-Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA-EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~-~~-~~~~~~  252 (319)
                      +.+.+++|+|.++.+++..... .| .+++++
T Consensus       221 ~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        221 TGLTDIEDIVPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             CCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence            3588999999999999985321 23 455554

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=166.20  Aligned_cols=222  Identities=16%  Similarity=0.141  Sum_probs=155.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++|+|+||||+|+||++++++|+++|++ |++++|+..+.. .....+...+.++.++.+|+++.+++.++++      
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE-AQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999 999998754322 1222222223467889999999998887764      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|+|||++|......    ..+.+...+++|+.++.++++++.+.    + .+++|++||...+.+.+.         
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~---------  153 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF---------  153 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC---------
Confidence             4799999999654321    11223557899999999999888653    2 357999999776554321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC----CCccHHHHHHHHhcCcccc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK----VNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~  218 (319)
                                  .+.|+.+|.+.|.+++.++.+   .+++++.++|+.++++.....    ......++......     
T Consensus       154 ------------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-----  216 (260)
T PRK06198        154 ------------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAAT-----  216 (260)
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhcc-----
Confidence                        355999999999999987664   369999999999998753210    00111122221111     


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                       .....+++++|+++++++++.....  .| .+...+
T Consensus       217 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        217 -QPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             -CCccCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence             1345578999999999999865432  33 445554

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-21  Score=165.47  Aligned_cols=213  Identities=14%  Similarity=0.061  Sum_probs=146.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +|++|+++||||+++||++++++|+++|++|+++.|+..+.......++.. .+.++.++.+|++|.++++++++     
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999998876543322222222221 13468899999999998887765     


Q ss_pred             --CcceEEEecccCCCC------C----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCC
Q 020924           76 --GCNGVFHIACPAPST------T----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~------~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                        .+|++|||||.....      .    ..+.+...+++|+.+...+.+.+.+    .+.++||++||.....+.+.   
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  161 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN---  161 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC---
Confidence              479999999854210      0    0122355678888887776666653    34569999999754432221   


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (319)
                                        ...|+.||.+.+.+++.++.++   |++++.++||.+.++....... ............  
T Consensus       162 ------------------~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~--  220 (260)
T PRK08416        162 ------------------YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEELS--  220 (260)
T ss_pred             ------------------cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-CHHHHHHHHhcC--
Confidence                              3459999999999999887764   8999999999997764221111 011111111111  


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccC
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                          ....+..++|+|.++++++...
T Consensus       221 ----~~~r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        221 ----PLNRMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             ----CCCCCCCHHHHHHHHHHHcChh
Confidence                2345789999999999998754

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=4.4e-21  Score=162.73  Aligned_cols=219  Identities=16%  Similarity=0.130  Sum_probs=152.5

Q ss_pred             CCCCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCC---------hh-hHHHHHhhhccCCCeEEEEccCCChh
Q 020924            1 MALEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPS---------DE-KNARLYELEKASENLKLFKADLLDYD   68 (319)
Q Consensus         1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~---------~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~   68 (319)
                      |.+++++||||||||  +||++++++|+++|++|++++|++.         .. .......+...+.+++++.+|+++.+
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            778889999999995  7999999999999999999998722         11 11112222222346899999999998


Q ss_pred             hHHHHhc-------CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEecccccccc
Q 020924           69 SVKSAIV-------GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGL  133 (319)
Q Consensus        69 ~~~~~~~-------~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~  133 (319)
                      ++..+++       .+|+|||+||.......    .+.+...+++|+.++..+++++.+.    +.+++|++||...+.+
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence            8877664       47999999987543211    1223567899999999999998653    3468999999765443


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHH
Q 020924          134 NPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKL  210 (319)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~  210 (319)
                      .++                     ...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++....      ......
T Consensus       161 ~~~---------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~------~~~~~~  213 (256)
T PRK12748        161 MPD---------------------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE------ELKHHL  213 (256)
T ss_pred             CCC---------------------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh------hHHHhh
Confidence            221                     355999999999998887665   48999999999887664221      111111


Q ss_pred             HhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          211 LKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       211 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       ....     ....+..++|+++++.+++....  ..| .+++.+
T Consensus       214 -~~~~-----~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        214 -VPKF-----PQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             -hccC-----CCCCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence             1110     12335678999999998887533  234 345543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.3e-21  Score=162.94  Aligned_cols=198  Identities=18%  Similarity=0.176  Sum_probs=140.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccC-CCeEEEEccCCChhhHHHHhc------C
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKAS-ENLKLFKADLLDYDSVKSAIV------G   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~------~   76 (319)
                      +++|+||||||+||++++++|+++| ++|++++|+.+.......+++...+ .+++++.+|++|.++++++++      +
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~   87 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD   87 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence            5789999999999999999999985 9999999987642222233332222 368999999999888665543      5


Q ss_pred             cceEEEecccCCCC-C-CCCc--cchhhhhHHHHHHH----HHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPST-T-VPNP--QMELLEPAVKGTLN----VVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~-~-~~~~--~~~~~~~Nv~~~~~----l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|++||++|..... . ..++  ....+++|+.++..    +++.+++.+.++||++||..+..+.+             
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~-------------  154 (253)
T PRK07904         88 VDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRR-------------  154 (253)
T ss_pred             CCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCC-------------
Confidence            89999999875432 1 1111  11358999998877    45566666778999999976433221             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                              +...|+.||.+...+.+.++.   .+++++++++||.+.++.....            ..        ....
T Consensus       155 --------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~------------~~--------~~~~  206 (253)
T PRK07904        155 --------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA------------KE--------APLT  206 (253)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC------------CC--------CCCC
Confidence                    134599999998877666543   3589999999999987642211            00        0124


Q ss_pred             ccHHHHHHHHHHhhccCC
Q 020924          226 VDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~  243 (319)
                      +.++|+|+.++.++.+..
T Consensus       207 ~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        207 VDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            789999999999998653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=5.9e-21  Score=161.44  Aligned_cols=208  Identities=15%  Similarity=0.095  Sum_probs=149.4

Q ss_pred             CCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||+  +.||++++++|+++|++|++.+|+..  ....+.++.  ..++.++.+|++|.++++++++     
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~--~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR--MKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH--HHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            567999999999  79999999999999999999998732  222333332  2467889999999998887654     


Q ss_pred             --CcceEEEecccCCC----C----CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPS----T----TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~----~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++|||||....    .    ...+.+...+++|+.++..+++++.+.  ..++||++||.....+.+.       
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~-------  153 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN-------  153 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc-------
Confidence              47999999996532    1    112234677899999999999988764  2258999999765432221       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.+|.+.+.+++.++.+   +|++++.|.||.+-++...... .............      
T Consensus       154 --------------~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~------  212 (252)
T PRK06079        154 --------------YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK-GHKDLLKESDSRT------  212 (252)
T ss_pred             --------------chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC-ChHHHHHHHHhcC------
Confidence                          355999999999999888765   4899999999999877432111 1112222221111      


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +...+..++|+|+++++++...
T Consensus       213 p~~r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        213 VDGVGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             cccCCCCHHHHHHHHHHHhCcc
Confidence            2345789999999999999753

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-21  Score=162.75  Aligned_cols=197  Identities=15%  Similarity=0.125  Sum_probs=145.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc----Ccce
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV----GCNG   79 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----~~d~   79 (319)
                      ||+|+||||||+||++++++|+++|++|++++|+.++.. ...+++.. ...+++++.+|++|.+++.++++    .+|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLE-RLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHH-HHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            468999999999999999999999999999999865432 12222211 13478999999999998888765    3699


Q ss_pred             EEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           80 VFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        80 vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      +||++|........    +.....+++|+.++.++++++..    .+.+++|++||..+..+.+.               
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------  144 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS---------------  144 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC---------------
Confidence            99999865432111    11245788999999999988765    35679999999765443321               


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccH
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV  228 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  228 (319)
                            ...|+.+|.+.+.+++.++.+   .|++++.++|+.++++.....               .  .  ....++.+
T Consensus       145 ------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~---------------~--~--~~~~~~~~  199 (243)
T PRK07102        145 ------NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL---------------K--L--PGPLTAQP  199 (243)
T ss_pred             ------CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc---------------C--C--CccccCCH
Confidence                  345999999999988887543   489999999999988642211               0  0  11235789


Q ss_pred             HHHHHHHHHhhccC
Q 020924          229 RDVAEALLLAYEKA  242 (319)
Q Consensus       229 ~D~a~~~~~~~~~~  242 (319)
                      +|+++.++.++.+.
T Consensus       200 ~~~a~~i~~~~~~~  213 (243)
T PRK07102        200 EEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999864

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.2e-21  Score=163.69  Aligned_cols=210  Identities=20%  Similarity=0.228  Sum_probs=150.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+|+||||+|+||++++++|+++|++|+++.|+.+... .....+...+.+++++.+|+++.+++.++++       
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLK-ELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            66799999999999999999999999999999999865321 1222222223568899999999998888765       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----C--------CCEEEEeccccccccCCCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----K--------VKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~--------~~~iv~~SS~~~~~~~~~~~~  139 (319)
                      .+|+|||+|+.......    .+.+..++++|+.++.++++++...    .        .+++|++||...+.+.+    
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----  161 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP----  161 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC----
Confidence            47999999996433211    1234667899999999999887632    1        25899999976543221    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (319)
                                       ...+|+.+|.+.+.+++.++.+   +++++++++||.++++......  ........ ... .
T Consensus       162 -----------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~-~~~-~  220 (258)
T PRK06949        162 -----------------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW--ETEQGQKL-VSM-L  220 (258)
T ss_pred             -----------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc--ChHHHHHH-Hhc-C
Confidence                             1456999999999999887665   4899999999999988643221  11111111 111 1


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccC
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                          ....+..++|+++++.+++...
T Consensus       221 ----~~~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        221 ----PRKRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             ----CCCCCcCHHHHHHHHHHHhChh
Confidence                2345678999999999998753

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.1e-21  Score=162.79  Aligned_cols=208  Identities=21%  Similarity=0.196  Sum_probs=144.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++++|+||||||+||++++++|+++|++|++++|+..... .....+     ...++.+|++|.++++.+++       
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGK-AAADEV-----GGLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            66799999999999999999999999999999999765321 111222     12578899999999888775       


Q ss_pred             CcceEEEecccCCCC--C----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAPST--T----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~--~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      .+|+|||+||.....  .    ..+.+...+++|+.++.++++.+..    .+.+++|++||..+.++.+          
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~----------  148 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA----------  148 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC----------
Confidence            479999999865321  1    1122467788999999888887753    4556899999965544321          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                .+...|+.+|.+.+.+++.++.+   .++++++++||.+.++..............+....  .    ..
T Consensus       149 ----------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~----~~  212 (255)
T PRK06057        149 ----------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVH--V----PM  212 (255)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhc--C----CC
Confidence                      01345999998887777765443   38999999999998876432211111111111111  1    22


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+.+++|+++++..++...
T Consensus       213 ~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        213 GRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             CCCcCHHHHHHHHHHHhCcc
Confidence            35789999999999888654

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.9e-21  Score=163.46  Aligned_cols=210  Identities=13%  Similarity=0.084  Sum_probs=147.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|+++||||+|+||++++++|+++|++|++++|+..... .....+...+.++.++.+|++|.+++.++++       .+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLE-EAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            478999999999999999999999999999999865321 1222222223578899999999998887664       47


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |+|||+||......    ..+.+...+++|+.++.++++++.+.    + .++||++||...+.+.+.            
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------  147 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG------------  147 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC------------
Confidence            99999998543211    12224668999999999999999542    2 358999999765432211            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               ...|+.+|.+.+.+++.++.+    +|++++.++||.+.++..............+..+..      ....
T Consensus       148 ---------~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~------~~~~  212 (252)
T PRK07677        148 ---------VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSV------PLGR  212 (252)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccC------CCCC
Confidence                     345999999999888876554    489999999999985432111001122222222221      2335


Q ss_pred             cccHHHHHHHHHHhhccC
Q 020924          225 IVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~  242 (319)
                      +..++|+++++..++...
T Consensus       213 ~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        213 LGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             CCCHHHHHHHHHHHcCcc
Confidence            779999999999988753

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-21  Score=164.78  Aligned_cols=203  Identities=22%  Similarity=0.182  Sum_probs=146.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--------C
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--------G   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~   76 (319)
                      ||++|||||||+||++++++|+++|++|++++|+.+... .....+.  +.++.++.+|++|.+++.++++        .
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLA-ALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999998765321 1111111  2468899999999988887654        4


Q ss_pred             cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|+||||||.......    .+.++..+++|+.++.++++++.+    .+.++||++||..++++.+.            
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  145 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG------------  145 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC------------
Confidence            6999999997543211    122467899999999999888853    35679999999877665432            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++......   .........        .....
T Consensus       146 ---------~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~--------~~~~~  205 (260)
T PRK08267        146 ---------LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS---NEVDAGSTK--------RLGVR  205 (260)
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc---chhhhhhHh--------hccCC
Confidence                     345999999999988887654   4799999999999766432200   000000000        01113


Q ss_pred             ccHHHHHHHHHHhhccC
Q 020924          226 VDVRDVAEALLLAYEKA  242 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~  242 (319)
                      +.++|+|++++.+++..
T Consensus       206 ~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        206 LTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            67899999999999754

>PRK08324 short chain dehydrogenase; Validated

Probab=99.89  E-value=1.5e-21  Score=186.31  Aligned_cols=224  Identities=19%  Similarity=0.146  Sum_probs=157.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++++||||||+|+||++++++|+++|++|++++|+.... ......+... .++.++.+|++|.+++.++++       
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~-~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAA-EAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHH-HHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999999999986532 1122222211 368899999999998887765       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCC-CEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKV-KRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~-~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      ++|+||||||......    ..+.+...+++|+.++.++++++.+    .+. ++||++||..++.+.++          
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~----------  567 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN----------  567 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC----------
Confidence            5799999999654321    1122466789999999999887753    343 69999999876654421          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCccc-CCCCCCCCCccHHHHHHHHhcCc-------
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVL-GPLLQSKVNTSSLVLIKLLKEGY-------  215 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~-------  215 (319)
                                 ...|+.+|.+.+.+++.++.++   |+++++++|+.+| +....... .  ...+....+..       
T Consensus       568 -----------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~-~--~~~~~~~~g~~~~~~~~~  633 (681)
T PRK08324        568 -----------FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGE-W--IEARAAAYGLSEEELEEF  633 (681)
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccch-h--hhhhhhhccCChHHHHHH
Confidence                       4569999999999999887654   6999999999998 44321110 0  00000111111       


Q ss_pred             cccCCcccccccHHHHHHHHHHhhc--cCCCCc-eEEEec
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYE--KAEAEG-RYICTA  252 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~--~~~~~~-~~~~~~  252 (319)
                      ...+...+++++++|+|++++.++.  .....| +++++|
T Consensus       634 ~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        634 YRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             HHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            1123467889999999999999984  333334 566664

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.2e-21  Score=165.19  Aligned_cols=187  Identities=19%  Similarity=0.116  Sum_probs=129.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+..... ....++..  .+.++.++.+|++|.+++.++++    
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGK-AAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999765421 22222221  12468889999999998887764    


Q ss_pred             ---CcceEEEecccCCCC--CCCCccchhhhhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 ---GCNGVFHIACPAPST--TVPNPQMELLEPAVKG----TLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~--~~~~~~~~~~~~Nv~~----~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                         .+|+||||||.....  ...+.++..+++|+.+    +..+++.+++.+.++||++||........     ...++.
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-----~~~~~~  166 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-----IHFDDL  166 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-----CCcccc
Confidence               479999999965432  1223446788999999    45555555555667999999976432111     111111


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEE--EEecCcccCCCCC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVV--TICPNLVLGPLLQ  197 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~--~lrp~~v~G~~~~  197 (319)
                      ....   +..+...|+.||.+.+.+++.++++.   +++++  .+.||.+.++...
T Consensus       167 ~~~~---~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~  219 (306)
T PRK06197        167 QWER---RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR  219 (306)
T ss_pred             Cccc---CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence            1100   11235679999999999999887653   55554  4579999877543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-20  Score=160.04  Aligned_cols=213  Identities=16%  Similarity=0.084  Sum_probs=148.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+..+.......++...+.++.++.+|++|.+++.++++      
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999988865433233333333334567889999999998887664      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHH----HhCC-CCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKAC----LEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~----~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|++||+||.......    .+.+...+++|+.++..+++.+    .+.+ -++||++||.....+.+          
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~----------  153 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP----------  153 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC----------
Confidence             47999999997543211    1223567899998887666554    4443 35899999965443221          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++........ ...........      ..
T Consensus       154 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~------~~  215 (261)
T PRK08936        154 -----------LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRADVESMI------PM  215 (261)
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHHHHHhcC------CC
Confidence                       1456999999888877777554   389999999999988754322111 11111111111      23


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+..++|+++++++++...
T Consensus       216 ~~~~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        216 GYIGKPEEIAAVAAWLASSE  235 (261)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            45778999999999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.2e-21  Score=164.19  Aligned_cols=206  Identities=22%  Similarity=0.218  Sum_probs=150.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++++++||||+|+||++++++|+++|++|++++|+..... ....++ ..+.++.++.+|++|.+++..+++     
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   78 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARL-PYPGRHRWVVADLTSEAGREAVLARAREM   78 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhc
Confidence            8888999999999999999999999999999999999755322 122222 123578899999999998887654     


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+|||+||.......    .+.+...+++|+.++.++++.+.+.    +.+++|++||..+..+.++          
T Consensus        79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------  148 (263)
T PRK09072         79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG----------  148 (263)
T ss_pred             CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC----------
Confidence             47999999987543211    1223567889999999999998653    4468999999766554321          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.+|.+.+.+++.++.+   .+++++.+.|+.+.++......       ... .      .....
T Consensus       149 -----------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~~-~------~~~~~  203 (263)
T PRK09072        149 -----------YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-------QAL-N------RALGN  203 (263)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-------ccc-c------ccccC
Confidence                       355999999998888877654   4799999999988765422110       000 0      00112


Q ss_pred             ccccHHHHHHHHHHhhccCC
Q 020924          224 MIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~  243 (319)
                      .+..++|+|++++.++++..
T Consensus       204 ~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        204 AMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             CCCCHHHHHHHHHHHHhCCC
Confidence            46789999999999998753

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=8.8e-21  Score=160.09  Aligned_cols=211  Identities=16%  Similarity=0.119  Sum_probs=145.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|+|+||||+|+||+++++.|+++|++|+++.++...........+...+.++.++.+|+++.+++.++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999998776543332222333333334578899999999988877664       47


Q ss_pred             ceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC-C------CCEEEEeccccccccCCCCCCCcccCC
Q 020924           78 NGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA-K------VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        78 d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~-~------~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      |+|||+||......     ..+.+...+++|+.++..+++++.+. .      -.+||++||.+++++.+.         
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------  152 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN---------  152 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC---------
Confidence            99999999653321     11123556899999999988665432 1      236999999776654321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 ....|+.+|.+.+.+++.+++++   +++++++|||.+.++..... .. ...........      ..
T Consensus       153 -----------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~-~~~~~~~~~~~------~~  213 (248)
T PRK06947        153 -----------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQ-PGRAARLGAQT------PL  213 (248)
T ss_pred             -----------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CC-HHHHHHHhhcC------CC
Confidence                       02349999999999988887654   79999999999998853221 11 11111111111      12


Q ss_pred             cccccHHHHHHHHHHhhccCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ..+..++|+++.+++++....
T Consensus       214 ~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        214 GRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             CCCcCHHHHHHHHHHHcCccc
Confidence            235689999999999988654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=7.1e-21  Score=165.36  Aligned_cols=206  Identities=13%  Similarity=0.061  Sum_probs=145.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+++||||+|+||++++++|+++|++|++.+|+..........++...+.++.++.+|++|.+++.++++      
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999988764432223334443334578899999999988887764      


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----------CCCEEEEeccccccccCCCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----------KVKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----------~~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++++...           ..++||++||.....+.+.    
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  164 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG----  164 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC----
Confidence            4799999999764421    12234668899999999999987532           0248999999776544321    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                                       ...|+.+|.+.+.+++.++.+   +|++++.+.|+. .++...........    .       
T Consensus       165 -----------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~----~-------  215 (306)
T PRK07792        165 -----------------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPD----V-------  215 (306)
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccch----h-------
Confidence                             345999999999998887764   589999999973 22211100000000    0       


Q ss_pred             cCCcccccccHHHHHHHHHHhhcc
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      . ....+.++++|++.++.+++..
T Consensus       216 ~-~~~~~~~~pe~va~~v~~L~s~  238 (306)
T PRK07792        216 E-AGGIDPLSPEHVVPLVQFLASP  238 (306)
T ss_pred             h-hhccCCCCHHHHHHHHHHHcCc
Confidence            0 0112346899999999998864

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.88  E-value=8.3e-22  Score=167.69  Aligned_cols=212  Identities=20%  Similarity=0.130  Sum_probs=151.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+++||||||+||++++++|+++|++|++++|+.+..  ..+...  .+.++.++.+|++|.+++.++++     
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL--QELEAA--HGDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHhh--cCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            888899999999999999999999999999999999876432  222211  13467889999999888877664     


Q ss_pred             --CcceEEEecccCCCC-C----CC----CccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCc
Q 020924           76 --GCNGVFHIACPAPST-T----VP----NPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-~----~~----~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                        .+|++|||||..... .    ..    +.+...+++|+.++.++++++.+.   ..+++|++||...+.+.+.     
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----  151 (262)
T TIGR03325        77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG-----  151 (262)
T ss_pred             hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC-----
Confidence              479999999864211 1    11    124578999999999999999764   2247999999766554321     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCC-ccHH-----HHHHHHhc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVN-TSSL-----VLIKLLKE  213 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~-~~~~-----~~~~~~~~  213 (319)
                                      ...|+.+|.+.+.+++.++.++  .++++.+.||.+.++....... ....     ......+.
T Consensus       152 ----------------~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (262)
T TIGR03325       152 ----------------GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS  215 (262)
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh
Confidence                            3459999999999999888764  3899999999998775322100 0000     01111111


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccC
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .     .+...+..++|+|+++++++...
T Consensus       216 ~-----~p~~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       216 V-----LPIGRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             c-----CCCCCCCChHHhhhheeeeecCC
Confidence            1     13455788999999999998753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.8e-21  Score=165.23  Aligned_cols=212  Identities=23%  Similarity=0.207  Sum_probs=150.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++++++||||+|+||++++++|+++|++|++++|+..... ...+.+. ....+..+.+|++|.+++..+++       
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~-~~~~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELA-ALAAELG-GDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999999765321 1122221 12346667799999998887654       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .+|+||||||.......    .+.++..+++|+.++.++++++...   ..++||++||..++.+.+.            
T Consensus        85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  152 (296)
T PRK05872         85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG------------  152 (296)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC------------
Confidence            47999999997543211    1224667899999999999998653   2358999999776654321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.||.+.+.+++.++.+   .|+.++.++|+.+.++........ ...........+    .....+
T Consensus       153 ---------~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~----~p~~~~  218 (296)
T PRK05872        153 ---------MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLP----WPLRRT  218 (296)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCC----CcccCC
Confidence                     355999999999998887643   589999999999987653321111 011122211111    123456


Q ss_pred             ccHHHHHHHHHHhhccC
Q 020924          226 VDVRDVAEALLLAYEKA  242 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~  242 (319)
                      +.++|+|++++.++...
T Consensus       219 ~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        219 TSVEKCAAAFVDGIERR  235 (296)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            79999999999999864

>PRK08017 oxidoreductase; Provisional

Probab=99.88  E-value=4.8e-21  Score=162.46  Aligned_cols=204  Identities=21%  Similarity=0.175  Sum_probs=142.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--------Cc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--------GC   77 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~   77 (319)
                      ++|+||||||+||+++++.|+++|++|++++|+.+..  ..+..     .+++++.+|++|.+++..+++        .+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~--~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV--ARMNS-----LGFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh--HHHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999999999976532  11211     257888999999888776553        36


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHH----HHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNV----VKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l----~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      |.+||++|......    ..+.+...+++|+.++.++    ++.+++.+.+++|++||..++.+.+              
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------  141 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP--------------  141 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC--------------
Confidence            89999998643221    1122356889999998876    5555566778999999975544322              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhh---hhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFG---KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMI  225 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~---~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  225 (319)
                             ..+.|+.+|.+.|.+.+.++   ...+++++++||+.+.++.....        .......+.. .+...+.+
T Consensus       142 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~~~~  206 (256)
T PRK08017        142 -------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV--------NQTQSDKPVENPGIAARFT  206 (256)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc--------cchhhccchhhhHHHhhcC
Confidence                   14569999999998877653   33589999999988865432110        0000001111 11134568


Q ss_pred             ccHHHHHHHHHHhhccCCCC
Q 020924          226 VDVRDVAEALLLAYEKAEAE  245 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~~  245 (319)
                      ++++|+++++..+++++...
T Consensus       207 ~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        207 LGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             CCHHHHHHHHHHHHhCCCCC
Confidence            99999999999999876543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.5e-21  Score=162.89  Aligned_cols=214  Identities=15%  Similarity=0.122  Sum_probs=148.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      ||+++||||||+||++++++|+++|++|++++|+....  ..+..     .+++++.+|+++.+++.++++       .+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV--EALAA-----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999876432  11111     356788999999988887664       57


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      |+|||+||......    ..+.+...+++|+.++.++++++.+.   +.+++|++||..++.+.+.              
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  139 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF--------------  139 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC--------------
Confidence            99999999654321    11234667899999999999988642   4468999999776554321              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc----------cHHHHHHHHhcCccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT----------SSLVLIKLLKEGYES  217 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~  217 (319)
                             .++|+.+|.+.+.+++.++.+   +|++++.++||.+.++........          ............  .
T Consensus       140 -------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  210 (274)
T PRK05693        140 -------AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARA--R  210 (274)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHH--H
Confidence                   456999999999988877654   589999999999987643321100          000111110000  0


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCCCCceEEE
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAEAEGRYIC  250 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  250 (319)
                      .  .......++|+|+.++.+++++.....+..
T Consensus       211 ~--~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~  241 (274)
T PRK05693        211 A--SQDNPTPAAEFARQLLAAVQQSPRPRLVRL  241 (274)
T ss_pred             h--ccCCCCCHHHHHHHHHHHHhCCCCCceEEe
Confidence            0  001235799999999999987654344433

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.88  E-value=2.2e-21  Score=165.46  Aligned_cols=207  Identities=16%  Similarity=0.168  Sum_probs=148.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+++||||+|+||++++++|+++|++|++++|+.....          ..++.++.+|++|.++++++++     
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5677899999999999999999999999999999998765321          1357889999999998887765     


Q ss_pred             --CcceEEEecccCCCCC-------------CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCC
Q 020924           76 --GCNGVFHIACPAPSTT-------------VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPR  136 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~-------------~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~  136 (319)
                        .+|+|||+||......             ..+.+...+++|+.++..+++++.+.    +..+||++||...+.+.+.
T Consensus        75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (266)
T PRK06171         75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG  154 (266)
T ss_pred             cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence              4799999999643211             11223567899999999999998753    3458999999776554321


Q ss_pred             CCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCccc-CCCCCCCC-C--------cc
Q 020924          137 WPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVL-GPLLQSKV-N--------TS  203 (319)
Q Consensus       137 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~-G~~~~~~~-~--------~~  203 (319)
                                           ...|+.+|.+.+.+++.++.+   +|++++.++||.+. .+...... .        ..
T Consensus       155 ---------------------~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~  213 (266)
T PRK06171        155 ---------------------QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITV  213 (266)
T ss_pred             ---------------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCH
Confidence                                 455999999999999888765   48999999999885 22211100 0        00


Q ss_pred             HHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          204 SLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ......+...    .......+..++|+|.++.+++...
T Consensus       214 ~~~~~~~~~~----~~~p~~r~~~~~eva~~~~fl~s~~  248 (266)
T PRK06171        214 EQLRAGYTKT----STIPLGRSGKLSEVADLVCYLLSDR  248 (266)
T ss_pred             HHHHhhhccc----ccccCCCCCCHHHhhhheeeeeccc
Confidence            0111111110    0113456789999999999999754

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.88  E-value=5.2e-21  Score=160.59  Aligned_cols=204  Identities=17%  Similarity=0.162  Sum_probs=148.6

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------CcceE
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCNGV   80 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   80 (319)
                      |+||||+|+||.+++++|+++|++|++++|+..+......+++...+.++.++.+|++|.+++..+++       .+|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999998865433333334443334578999999999998887764       36999


Q ss_pred             EEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH-----hCCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           81 FHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL-----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        81 i~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~-----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      ||++|......    ..+.+..++++|+.++.++++++.     +.+.++||++||..++++.+.               
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~---------------  145 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG---------------  145 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC---------------
Confidence            99998643321    123346789999999999988763     234569999999877665432               


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccH
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV  228 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  228 (319)
                            ...|+.+|.+.+.+.+.++.+   .|++++.++|+.+.++.....    ...........      ....+..+
T Consensus       146 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~------~~~~~~~~  209 (239)
T TIGR01831       146 ------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEALKTV------PMNRMGQP  209 (239)
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHHhcC------CCCCCCCH
Confidence                  345999999998888877654   489999999999987754321    11112222111      23446789


Q ss_pred             HHHHHHHHHhhccC
Q 020924          229 RDVAEALLLAYEKA  242 (319)
Q Consensus       229 ~D~a~~~~~~~~~~  242 (319)
                      +|+++++++++...
T Consensus       210 ~~va~~~~~l~~~~  223 (239)
T TIGR01831       210 AEVASLAGFLMSDG  223 (239)
T ss_pred             HHHHHHHHHHcCch
Confidence            99999999999854

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=3.3e-21  Score=164.63  Aligned_cols=211  Identities=15%  Similarity=0.126  Sum_probs=148.1

Q ss_pred             CCCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |.|++|+++||||+  +.||++++++|+++|++|++.+|+...  ...++.+.. .+.. .++.+|++|.+++.++++  
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~--~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL--KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH--HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHH
Confidence            88999999999997  799999999999999999999987431  112222211 1223 578899999998887764  


Q ss_pred             -----CcceEEEecccCCC----C----CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCC
Q 020924           76 -----GCNGVFHIACPAPS----T----TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~----~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                           .+|++|||||....    .    ...+.+...+++|+.++..+++++.+.  .-++||++||.+...+.+.    
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~----  153 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH----  153 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc----
Confidence                 47999999996431    1    112235678999999999999988764  2258999999765432221    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                                       ...|+.||.+.+.+.+.++.+   +|++++.+.||.+.++....... ... ........   
T Consensus       154 -----------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~-~~~~~~~~---  211 (274)
T PRK08415        154 -----------------YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-FRM-ILKWNEIN---  211 (274)
T ss_pred             -----------------chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-hhH-Hhhhhhhh---
Confidence                             345999999999999888765   48999999999998753221100 000 00100000   


Q ss_pred             cCCcccccccHHHHHHHHHHhhccC
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                        .+...+..++|+|+++++++...
T Consensus       212 --~pl~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        212 --APLKKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             --CchhccCCHHHHHHHHHHHhhhh
Confidence              12345688999999999999753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=6.8e-21  Score=162.59  Aligned_cols=210  Identities=14%  Similarity=0.103  Sum_probs=146.6

Q ss_pred             CCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|++|||||++  .||++++++|+++|++|++.+|+...  ...++++........++.+|++|.++++++++     
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~--~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL--GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH--HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            6678999999997  99999999999999999999886432  11222221111223568899999999887764     


Q ss_pred             --CcceEEEecccCCC--------CCCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPS--------TTVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++|||||....        ....+.+...+++|+.++.++++++...  .-++||++||.++..+.+.       
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------  155 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPN-------  155 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCc-------
Confidence              47999999996431        1112335678899999999999888654  2258999999765433221       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.+|.+.+.+++.++.+   +|++++.|.||.+.++.......  ........... .    
T Consensus       156 --------------~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~--~~~~~~~~~~~-~----  214 (271)
T PRK06505        156 --------------YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD--ARAIFSYQQRN-S----  214 (271)
T ss_pred             --------------cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc--hHHHHHHHhhc-C----
Confidence                          345999999999999888765   48999999999998764321100  11111111111 1    


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+..++|+|+++++++...
T Consensus       215 p~~r~~~peeva~~~~fL~s~~  236 (271)
T PRK06505        215 PLRRTVTIDEVGGSALYLLSDL  236 (271)
T ss_pred             CccccCCHHHHHHHHHHHhCcc
Confidence            2334678999999999999753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.88  E-value=5.1e-21  Score=162.97  Aligned_cols=211  Identities=17%  Similarity=0.114  Sum_probs=150.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.|++|+++||||+|+||++++++|+++|++|++++|+.+..  ..+...  .+.++.++++|++|.+++..+++     
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL--ASLRQR--FGDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHH--hCCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            446789999999999999999999999999999999976532  222111  12467889999999988887764     


Q ss_pred             --CcceEEEecccCCCC-C----CCC----ccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCc
Q 020924           76 --GCNGVFHIACPAPST-T----VPN----PQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-~----~~~----~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                        .+|++||+||..... .    ..+    .++..+++|+.++..+++++.+.   ..+++|++||...+.+.++     
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----  152 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG-----  152 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC-----
Confidence              479999999964321 1    111    13457889999999999888753   2258999999876654321     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCC--------CccHHHHHHHH
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKV--------NTSSLVLIKLL  211 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~--------~~~~~~~~~~~  211 (319)
                                      ...|+.+|.+.+.+++.++.++  +++++.+.||.+.++......        ...... ....
T Consensus       153 ----------------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~  215 (263)
T PRK06200        153 ----------------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMI  215 (263)
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHh
Confidence                            3459999999999999887754  599999999999877532110        000001 1111


Q ss_pred             hcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          212 KEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       212 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ...     .....+..++|+|.++++++...
T Consensus       216 ~~~-----~p~~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        216 AAI-----TPLQFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             hcC-----CCCCCCCCHHHHhhhhhheeccc
Confidence            111     13456789999999999999754

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=8e-21  Score=161.16  Aligned_cols=212  Identities=14%  Similarity=0.085  Sum_probs=148.8

Q ss_pred             CCCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |+|++|+++||||+  +.||++++++|+++|++|++++|+....  ..++++........++.+|++|.++++++++   
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR--PYVEPLAEELDAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH--HHHHHHHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence            46788999999998  5999999999999999999999875421  1222221111235678899999998887664   


Q ss_pred             ----CcceEEEecccCCCC--------CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCc
Q 020924           76 ----GCNGVFHIACPAPST--------TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~--------~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                          .+|++|||||.....        ...+.+...+++|+.++.++++.+...  .-.+||++||.....+.+      
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~------  157 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVE------  157 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCc------
Confidence                479999999964321        112235678999999999999988754  225899999965432221      


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                     ....|+.+|.+.+.+.+.++.+   +|+++..+.||.+.++...... .............    
T Consensus       158 ---------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----  217 (258)
T PRK07533        158 ---------------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGID-DFDALLEDAAERA----  217 (258)
T ss_pred             ---------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccC-CcHHHHHHHHhcC----
Confidence                           1355999999999988887664   4899999999999876432111 1112222222111    


Q ss_pred             CCcccccccHHHHHHHHHHhhccC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                        ....+..++|+|+++++++...
T Consensus       218 --p~~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        218 --PLRRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             --CcCCCCCHHHHHHHHHHHhChh
Confidence              2345789999999999998753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.88  E-value=6.9e-21  Score=161.51  Aligned_cols=214  Identities=14%  Similarity=0.066  Sum_probs=150.6

Q ss_pred             CCCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChh-hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDE-KNARLYELEKASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |++++|+++||||+  +.||++++++|+++|++|++..|+.+.. ....+.++......+.++.+|++|.+++.++++  
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45778999999986  8999999999999999999887754321 223333333222346788999999999987764  


Q ss_pred             -----CcceEEEecccCCC-----C---CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCC
Q 020924           76 -----GCNGVFHIACPAPS-----T---TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~-----~---~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                           .+|++|||||....     .   ...+.+...+++|+.++..+++++.+.  .-++||++||.....+.+.    
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~----  157 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN----  157 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc----
Confidence                 47999999996431     1   112335778899999999999988653  2258999999765433221    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                                       ...|+.+|.+.+.+.+.++.+   +|++++.+.||.+.++....... ...........    
T Consensus       158 -----------------~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~----  215 (258)
T PRK07370        158 -----------------YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-ILDMIHHVEEK----  215 (258)
T ss_pred             -----------------cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-chhhhhhhhhc----
Confidence                             455999999999999988765   47999999999998764321100 11111111111    


Q ss_pred             cCCcccccccHHHHHHHHHHhhccC
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                        .....+..++|++.++.+++...
T Consensus       216 --~p~~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        216 --APLRRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             --CCcCcCCCHHHHHHHHHHHhChh
Confidence              13345788999999999999754

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-20  Score=160.05  Aligned_cols=213  Identities=18%  Similarity=0.142  Sum_probs=147.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.. .....+...  ..++.++.+|++|.+++.++++     
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLA-SAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            56799999999999999999999999999999999865422 112222211  2367788999999998887654     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||......    ..+.+...+++|+.+...+++.+..    .+.++||++||..+..+.+.         
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  155 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH---------  155 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC---------
Confidence              4799999999653221    1123466788998888887777653    34569999999776543321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC------C-ccHHHHHHHHhcCc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV------N-TSSLVLIKLLKEGY  215 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~------~-~~~~~~~~~~~~~~  215 (319)
                                  ...|+.+|.+.+.+++.++.+   .|++++.++||.+.++......      . ............. 
T Consensus       156 ------------~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  222 (265)
T PRK07062        156 ------------MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKK-  222 (265)
T ss_pred             ------------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcC-
Confidence                        345999999988888877654   4899999999999876432110      0 0011111111001 


Q ss_pred             cccCCcccccccHHHHHHHHHHhhcc
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                         .-....+..++|+|.++++++..
T Consensus       223 ---~~p~~r~~~p~~va~~~~~L~s~  245 (265)
T PRK07062        223 ---GIPLGRLGRPDEAARALFFLASP  245 (265)
T ss_pred             ---CCCcCCCCCHHHHHHHHHHHhCc
Confidence               11344578999999999999874

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-20  Score=157.76  Aligned_cols=215  Identities=17%  Similarity=0.132  Sum_probs=152.5

Q ss_pred             EEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC---cceEEEecc
Q 020924            9 CVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG---CNGVFHIAC   85 (319)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~vi~~a~   85 (319)
                      +||||+|+||++++++|+++|++|++++|+..... .....+. ...+++++.+|++|.+++..+++.   +|++||++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLA-AAARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            69999999999999999999999999999754321 1122221 134688999999999999998874   799999999


Q ss_pred             cCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           86 PAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        86 ~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      ......    ..+.+..++++|+.++.+++++....+.++||++||..++.+.+                     +.+.|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~---------------------~~~~Y  137 (230)
T PRK07041         79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSA---------------------SGVLQ  137 (230)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCC---------------------cchHH
Confidence            754321    12234678899999999999966555667999999977655432                     14569


Q ss_pred             HhhHHHHHHHHHHhhhhC-CceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhh
Q 020924          162 CLSKTEAESEALEFGKKT-GLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      +.+|.+.+.+++.++.+. +++++.++|+.+.++...... ......+.......      ....+..++|+|++++.++
T Consensus       138 ~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~  211 (230)
T PRK07041        138 GAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERL------PARRVGQPEDVANAILFLA  211 (230)
T ss_pred             HHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHh
Confidence            999999999999887664 689999999988765422110 00111122222111      1223568899999999999


Q ss_pred             ccCCCCc-eEEEec
Q 020924          240 EKAEAEG-RYICTA  252 (319)
Q Consensus       240 ~~~~~~~-~~~~~~  252 (319)
                      ......| .|++++
T Consensus       212 ~~~~~~G~~~~v~g  225 (230)
T PRK07041        212 ANGFTTGSTVLVDG  225 (230)
T ss_pred             cCCCcCCcEEEeCC
Confidence            8654444 566654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.1e-20  Score=157.75  Aligned_cols=197  Identities=21%  Similarity=0.179  Sum_probs=145.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc-------
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +|+++||||||+||++++++|+++|++|++++|+..... .....+...  +.+++++.+|++|.+++.++++       
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE-ELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999865422 111222111  3468889999999998887664       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++||+||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.           
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  149 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG-----------  149 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC-----------
Confidence            57999999997543221    11224578899999999998875    346679999999776554321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               +...|+.||.+.+.++..++.+   .+++++.++|+.+.++.....            .        ....
T Consensus       150 ---------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~------------~--------~~~~  200 (248)
T PRK08251        150 ---------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA------------K--------STPF  200 (248)
T ss_pred             ---------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc------------c--------cCCc
Confidence                     1355999999999888877654   379999999999987643211            0        0112


Q ss_pred             cccHHHHHHHHHHhhccC
Q 020924          225 IVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~  242 (319)
                      .++.+|.|++++.++++.
T Consensus       201 ~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        201 MVDTETGVKALVKAIEKE  218 (248)
T ss_pred             cCCHHHHHHHHHHHHhcC
Confidence            578999999999999864

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.87  E-value=1.6e-20  Score=157.84  Aligned_cols=207  Identities=16%  Similarity=0.179  Sum_probs=145.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |++|||||||+||++++++|+++|++|+++.|+...............+.++.++.+|++|.+++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            5799999999999999999999999999998843322222222232223578899999999988877664       479


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +|||+||......    ..+.+...+++|+.++..+++.+    ++.+.+++|++||.....+.++              
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------  146 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG--------------  146 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC--------------
Confidence            9999998654321    11223567789999988866555    4456779999999755443321              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                             ...|+.+|.+.+.+++.++++   .+++++.++|+.+.++.....   ....+.......      ....+..
T Consensus       147 -------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~------~~~~~~~  210 (242)
T TIGR01829       147 -------QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM---REDVLNSIVAQI------PVGRLGR  210 (242)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc---chHHHHHHHhcC------CCCCCcC
Confidence                   345999999999888887654   489999999999988754321   122222222221      2334668


Q ss_pred             HHHHHHHHHHhhccC
Q 020924          228 VRDVAEALLLAYEKA  242 (319)
Q Consensus       228 v~D~a~~~~~~~~~~  242 (319)
                      ++|+++++.+++..+
T Consensus       211 ~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       211 PEEIAAAVAFLASEE  225 (242)
T ss_pred             HHHHHHHHHHHcCch
Confidence            899999998888653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07069 short chain dehydrogenase; Validated

Probab=99.87  E-value=8.3e-21  Score=160.51  Aligned_cols=209  Identities=17%  Similarity=0.127  Sum_probs=144.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC--CCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS--ENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +++||||+|+||+++++.|+++|++|++++|+..+......+.+....  ..+.++.+|++|.+++.++++       .+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            489999999999999999999999999999973322222222222111  234567899999998887664       47


Q ss_pred             ceEEEecccCCCCCC----CCccchhhhhHHH----HHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           78 NGVFHIACPAPSTTV----PNPQMELLEPAVK----GTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        78 d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~----~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      |+|||+||.......    .+.+...+++|+.    ++..++..+++.+.++||++||..++.+.+.             
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~-------------  147 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD-------------  147 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC-------------
Confidence            999999997654311    1123556788888    6777777777777789999999877654432             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCC--ccHHHHHHHHhcCccccCCcc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVN--TSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  222 (319)
                              ...|+.+|.+.+.+++.++.+     .+++++.++|+.+.++.......  ..........++.      +.
T Consensus       148 --------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~  213 (251)
T PRK07069        148 --------YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV------PL  213 (251)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC------CC
Confidence                    345999999999998887654     24899999999998876432110  0011111111111      23


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+.+++|++++++.++...
T Consensus       214 ~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        214 GRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            45678999999999988754

>TIGR02415 23BDH acetoin reductases

Probab=99.87  E-value=1.7e-20  Score=158.89  Aligned_cols=210  Identities=20%  Similarity=0.182  Sum_probs=147.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+++||||+|+||++++++|+++|++|+++.|+.... ......+...+.++.++.+|++|.+++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETA-KETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999875432 22223333334568899999999998887754       469


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      +|||+|+......    ..+.+...+++|+.++..+++++.+    .+ .+++|++||....++.+.             
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  146 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI-------------  146 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC-------------
Confidence            9999998754321    1122356789999999888777754    22 369999999877665432             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhcCcccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKEGYESL  218 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~  218 (319)
                              .+.|+.+|.+.+.+++.++.++   ++++++++|+.+.++.......        ...........      
T Consensus       147 --------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------  212 (254)
T TIGR02415       147 --------LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSS------  212 (254)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHh------
Confidence                    4559999999999998776553   7999999999987664221100        00000000000      


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ......+.+++|+++++.+++....
T Consensus       213 ~~~~~~~~~~~~~a~~~~~l~~~~~  237 (254)
T TIGR02415       213 EIALGRPSEPEDVAGLVSFLASEDS  237 (254)
T ss_pred             hCCCCCCCCHHHHHHHHHhhccccc
Confidence            0123457899999999999998754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=1.3e-20  Score=160.11  Aligned_cols=210  Identities=15%  Similarity=0.116  Sum_probs=145.8

Q ss_pred             CCCCeEEEeCc--chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGA--GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||  ++.||++++++|+++|++|++..|+..  ....++++.........+++|++|.++++.+++     
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK--LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH--HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            56789999997  679999999999999999999877532  222333333222335678999999999988764     


Q ss_pred             --CcceEEEecccCCCC---------CCCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCc
Q 020924           76 --GCNGVFHIACPAPST---------TVPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~---------~~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                        .+|++|||||.....         ...+.+...+++|+.++..+.+++...   +.++||++||.....+.++     
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~-----  156 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN-----  156 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC-----
Confidence              479999999975421         011223556789999998888876543   2258999999765543321     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                      ...|+.+|.+.+.+++.++.+   +|++++.+.||.+.++...... .............    
T Consensus       157 ----------------~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~----  215 (261)
T PRK08690        157 ----------------YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIA-DFGKLLGHVAAHN----  215 (261)
T ss_pred             ----------------cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCC-chHHHHHHHhhcC----
Confidence                            345999999999888877643   5899999999999876422110 0111111111111    


Q ss_pred             CCcccccccHHHHHHHHHHhhccC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                        +...+..++|+|+++++++...
T Consensus       216 --p~~r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        216 --PLRRNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             --CCCCCCCHHHHHHHHHHHhCcc
Confidence              3455789999999999999854

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-20  Score=157.66  Aligned_cols=200  Identities=14%  Similarity=0.032  Sum_probs=141.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCC--hhhHHHHh-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLD--YDSVKSAI-----   74 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~--~~~~~~~~-----   74 (319)
                      |++++++||||+|+||++++++|+++|++|++++|+..... ....++.. ....+.++.+|+++  .+++..++     
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE-KVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHH-HHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999875322 12222211 12346778899975  33444332     


Q ss_pred             ---cCcceEEEecccCCCCC--C---CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcc
Q 020924           75 ---VGCNGVFHIACPAPSTT--V---PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        75 ---~~~d~vi~~a~~~~~~~--~---~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                         ..+|+|||+||......  .   .+.+...+++|+.++.++++++.+.    +..++|++||..+..+.+       
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------  155 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKA-------  155 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCC-------
Confidence               35799999999643211  1   1223457899999999998888653    456999999965443221       


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC----CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT----GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                    ....|+.+|.+.+.+++.++.+.    +++++.++||.++++......                 .
T Consensus       156 --------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------------~  204 (239)
T PRK08703        156 --------------YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------------P  204 (239)
T ss_pred             --------------CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------------C
Confidence                          13459999999999998887653    599999999999988532110                 0


Q ss_pred             CCcccccccHHHHHHHHHHhhcc
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      +.....+...+|++..+.+++..
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        205 GEAKSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             CCCccccCCHHHHHHHHHHHhCc
Confidence            11123457999999999999973

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=3.2e-20  Score=157.56  Aligned_cols=210  Identities=16%  Similarity=0.122  Sum_probs=145.9

Q ss_pred             CCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||++  .||++++++|+++|++|++.+|+..  ....++++....+....+.+|++|.++++++++     
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK--LKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh--HHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            4568999999985  9999999999999999999888632  122333333223456778899999999998764     


Q ss_pred             --CcceEEEecccCCCCC---------CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPSTT---------VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~---------~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        .+|++|||||......         ..+.+...+++|+.+...+.+++...  .-.+||++||.....+.+.      
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~------  155 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------  155 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC------
Confidence              3799999999643211         11223566789999998888887643  2258999999654332221      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.||.+.+.+++.++.+   +|+++..+.||.+.++....... ............     
T Consensus       156 ---------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~-----  214 (262)
T PRK07984        156 ---------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-FRKMLAHCEAVT-----  214 (262)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-hHHHHHHHHHcC-----
Confidence                           345999999999999988765   48999999999997753211101 111111111111     


Q ss_pred             CcccccccHHHHHHHHHHhhccC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                       ....+..++|+++++++++...
T Consensus       215 -p~~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        215 -PIRRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             -CCcCCCCHHHHHHHHHHHcCcc
Confidence             2345789999999999999753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1e-20  Score=160.03  Aligned_cols=207  Identities=18%  Similarity=0.164  Sum_probs=140.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc-------
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGC-------   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------   77 (319)
                      ||+|+||||||+||++++++|+++|++|++++|+..+... .+.+  ..+.+++++.+|++|.++++.+++.+       
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELT-KLAE--QYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHH-HHHh--ccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            3689999999999999999999999999999997643211 1111  12357889999999999998877532       


Q ss_pred             ----ceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCccc
Q 020924           78 ----NGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        78 ----d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                          +++||+||.....     ...+.+...+++|+.++..+++.+...     +.++||++||..+..+.+        
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  149 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF--------  149 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC--------
Confidence                2789999864321     111223567788998877776665432     346899999965432221        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCc
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGY  215 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~  215 (319)
                                   +...|+.+|.+.+.+++.++.+     ++++++.++||.+-++.....   ............... 
T Consensus       150 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-  215 (251)
T PRK06924        150 -------------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK-  215 (251)
T ss_pred             -------------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh-
Confidence                         2566999999999999988654     479999999998876542110   000000111111100 


Q ss_pred             cccCCcccccccHHHHHHHHHHhhcc
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                           ....+..++|+|+.++.++..
T Consensus       216 -----~~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        216 -----EEGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             -----hcCCcCCHHHHHHHHHHHHhc
Confidence                 122368999999999999986

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.1e-21  Score=165.11  Aligned_cols=185  Identities=21%  Similarity=0.083  Sum_probs=136.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +|++|+++||||||+||.+++++|+++|++|++++|+.++. ...+.++...  ...+.++.+|++|.+++.++++    
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~-~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKG-EAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999986542 2223333221  2368889999999998887764    


Q ss_pred             ---CcceEEEecccCCCC---CCCCccchhhhhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 ---GCNGVFHIACPAPST---TVPNPQMELLEPAVKGTLNVVKACLE---AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~---~~~~~~~~~~~~Nv~~~~~l~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                         .+|++|||||.....   ...+.++..+.+|+.+...+.+.+..   .+..+||++||.....+...   ...+.++
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~---~~~~~~~  166 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAIN---WDDLNWE  166 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcC---ccccccc
Confidence               379999999975432   12344577899999999888888763   23469999999776554321   1122222


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLL  196 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~  196 (319)
                      .+.      .+...|+.||.+.+.+.++++++     .++.++.+.||.+.++..
T Consensus       167 ~~~------~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        167 RSY------AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             ccC------cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            221      22567999999999999988753     379999999999987653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=4.1e-20  Score=156.65  Aligned_cols=212  Identities=13%  Similarity=0.094  Sum_probs=146.9

Q ss_pred             CCCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc-
Q 020924            1 MALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      |++++|+++||||+  +.||++++++|+++|++|++++|+....  ..++++..  ...++.++.+|++|.++++++++ 
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE--KEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch--HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            34677999999997  8999999999999999999998864321  12222211  12467889999999999887764 


Q ss_pred             ------CcceEEEecccCCC----C----CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCC
Q 020924           76 ------GCNGVFHIACPAPS----T----TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~----~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                            .+|++|||||....    .    ...+.+...+++|+.+...+++++.+.  ...+||++||..+..+.+.   
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---  157 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN---  157 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC---
Confidence                  37999999986431    1    111223557889999999888888754  2258999999765433221   


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (319)
                                        ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++....... ...........   
T Consensus       158 ------------------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~---  215 (257)
T PRK08594        158 ------------------YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSILKEIEER---  215 (257)
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHHHHHhhc---
Confidence                              345999999999999888764   48999999999998763211100 01111111111   


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccC
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                         .....+..++|+|+++++++...
T Consensus       216 ---~p~~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        216 ---APLRRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             ---CCccccCCHHHHHHHHHHHcCcc
Confidence               12345678999999999999754

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.3e-20  Score=158.98  Aligned_cols=218  Identities=16%  Similarity=0.140  Sum_probs=150.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC--------hhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS--------DEKNARLYELEKASENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      +++|+++||||+++||++++++|++.|++|++++|+..        .......+++...+.++.++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            56789999999999999999999999999999987651        1112223333333446788999999998888766


Q ss_pred             c-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C------CCEEEEecccccccc
Q 020924           75 V-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K------VKRVIVVSSGVAVGL  133 (319)
Q Consensus        75 ~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~------~~~iv~~SS~~~~~~  133 (319)
                      +       .+|++|||||......    ..+.+...+++|+.++..+++++...    .      ..+||++||.++..+
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence            4       4799999999754321    12335678999999999998887532    1      248999999876654


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHH
Q 020924          134 NPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKL  210 (319)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~  210 (319)
                      .++                     ...|+.+|.+.+.+++.++.+   +|++++.|.|+ +.++...       ......
T Consensus       164 ~~~---------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-------~~~~~~  214 (286)
T PRK07791        164 SVG---------------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-------TVFAEM  214 (286)
T ss_pred             CCC---------------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-------hhHHHH
Confidence            432                     345999999999988887665   58999999998 5433211       111111


Q ss_pred             HhcCccccCCcccccccHHHHHHHHHHhhccCC--CCceE-EEecc
Q 020924          211 LKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEGRY-ICTAH  253 (319)
Q Consensus       211 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~~~  253 (319)
                      ....    +.....+..++|+|+++++++....  ..|.+ .+.|.
T Consensus       215 ~~~~----~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        215 MAKP----EEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             HhcC----cccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence            1111    1111235789999999999987532  34543 45443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.87  E-value=6.4e-20  Score=153.65  Aligned_cols=210  Identities=16%  Similarity=0.139  Sum_probs=146.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|++|||||+|+||++++++|+++|++|++++|+..+. ...+..     .++.++.+|++|.+++..+++       .+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA-IDGLRQ-----AGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHH-----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            46899999999999999999999999999999986532 122221     246788999999988887654       37


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C--CCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K--VKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      |++|||||......    ..+.++..+++|+.++..+.+.+.+.    +  .+++|++||.....+.+.           
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-----------  144 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK-----------  144 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC-----------
Confidence            99999999643321    12335678899999998887777653    2  358999999654332221           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                                ...|+.+|.+.+.+++.++.++  +++++.++|+.+..+... .    ...........      ....+
T Consensus       145 ----------~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-~----~~~~~~~~~~~------~~~~~  203 (236)
T PRK06483        145 ----------HIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-D----AAYRQKALAKS------LLKIE  203 (236)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-C----HHHHHHHhccC------ccccC
Confidence                      3459999999999999988764  599999999988543211 0    11111111111      12235


Q ss_pred             ccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          226 VDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      ..++|+++++.+++...-..| .+.+.|
T Consensus       204 ~~~~~va~~~~~l~~~~~~~G~~i~vdg  231 (236)
T PRK06483        204 PGEEEIIDLVDYLLTSCYVTGRSLPVDG  231 (236)
T ss_pred             CCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence            679999999999997544444 334433

>PRK06484 short chain dehydrogenase; Validated

Probab=99.87  E-value=1.7e-20  Score=174.95  Aligned_cols=219  Identities=17%  Similarity=0.171  Sum_probs=155.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      .+|++|||||+|+||++++++|+++|++|++++|+....  ..+.+.  ...++..+.+|++|.+++.++++       .
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGA--KKLAEA--LGDEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHH--hCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999975432  222211  12456778999999998888765       3


Q ss_pred             cceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           77 CNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        77 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      +|++|||||.....     ...+.+..++++|+.++.++++++...  +.++||++||.+++.+.+.             
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  410 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP-------------  410 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC-------------
Confidence            79999999965321     112234678999999999999998864  3459999999876654321             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                              ...|+.+|.+.+.+++.++.+   +|++++.++||.+.++.................+..      ....+.
T Consensus       411 --------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~  476 (520)
T PRK06484        411 --------RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRI------PLGRLG  476 (520)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcC------CCCCCc
Confidence                    455999999999999988765   389999999999988753221100011111221111      233467


Q ss_pred             cHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          227 DVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .++|+|+++++++....  ..| .+.+.+.
T Consensus       477 ~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        477 DPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            89999999999997542  234 4455543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.4e-20  Score=157.08  Aligned_cols=210  Identities=17%  Similarity=0.132  Sum_probs=150.2

Q ss_pred             CCCCeEEEeCcch-HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cC-CCeEEEEccCCChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGG-FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-AS-ENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +++++++||||+| .||+++++.|+++|++|++++|+..... ...+.+.. .+ .++.++.+|+++.+++..+++    
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLG-ETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999997 7999999999999999999998765321 22222221 11 367889999999988887764    


Q ss_pred             ---CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         .+|+||||||.......    .+.+...+++|+.++..+++++.+.    + ..+||++||.....+.+        
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--------  165 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH--------  165 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--------
Confidence               47999999996432211    1234567889999999998888642    2 45899999866543322        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   +...|+.+|.+.+.+++.++.+   +|++++.++|+.+.++.....  .............      
T Consensus       166 -------------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~--~~~~~~~~~~~~~------  224 (262)
T PRK07831        166 -------------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV--TSAELLDELAARE------  224 (262)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc--cCHHHHHHHHhcC------
Confidence                         1345999999999999988765   589999999999998753321  1122222222221      


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+..++|+|+++++++...
T Consensus       225 ~~~r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        225 AFGRAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             CCCCCcCHHHHHHHHHHHcCch
Confidence            2345778999999999999764

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.7e-20  Score=156.14  Aligned_cols=214  Identities=14%  Similarity=0.118  Sum_probs=148.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc---C
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV---G   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---~   76 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+..+.. ...+++.. .+.++.++.+|++|.+++..+++   .
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   81 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE-ALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD   81 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence            3457799999999999999999999999999999999865322 22222221 13467889999999998888765   5


Q ss_pred             cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|++|||||.......    .+.+...+++|+.+...+++++.+    .+.+++|++||.....+.+             
T Consensus        82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------------  148 (259)
T PRK06125         82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA-------------  148 (259)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC-------------
Confidence            8999999996543211    223466789999999999888743    3345899999965433221             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC------Cc-cHHHHHHHHhcCcccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV------NT-SSLVLIKLLKEGYESL  218 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~------~~-~~~~~~~~~~~~~~~~  218 (319)
                              ....|+.+|.+.+.+++.++.+   +|++++.++||.+.++......      .. ...........     
T Consensus       149 --------~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  215 (259)
T PRK06125        149 --------DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG-----  215 (259)
T ss_pred             --------CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc-----
Confidence                    1345999999999988887653   4899999999999876311000      00 00011111110     


Q ss_pred             CCcccccccHHHHHHHHHHhhccC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                       -....+..++|+|+++++++...
T Consensus       216 -~~~~~~~~~~~va~~~~~l~~~~  238 (259)
T PRK06125        216 -LPLGRPATPEEVADLVAFLASPR  238 (259)
T ss_pred             -CCcCCCcCHHHHHHHHHHHcCch
Confidence             12345779999999999998743

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=6.2e-20  Score=155.87  Aligned_cols=210  Identities=13%  Similarity=0.056  Sum_probs=145.9

Q ss_pred             CCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||++  .||.+++++|+++|++|++..|+..  ....++++........++.+|++|.++++++++     
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~--~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV--LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH--HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            5678999999997  8999999999999999999887632  122233332211223457899999999887764     


Q ss_pred             --CcceEEEecccCCC-----C---CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPS-----T---TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~-----~---~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++||+|+....     .   ...+.+...+++|+.++..+++++.+.  .-++||++||.....+.+.       
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------  156 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPN-------  156 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCc-------
Confidence              47999999986431     1   112235678899999999999987643  2258999999765433221       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.||.+.+.+.+.++.+   +|++++.+.||.+.++....... ............      
T Consensus       157 --------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~------  215 (260)
T PRK06603        157 --------------YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-FSTMLKSHAATA------  215 (260)
T ss_pred             --------------ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-cHHHHHHHHhcC------
Confidence                          345999999999988888764   48999999999997764221101 111111111111      


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+..++|+|+++++++...
T Consensus       216 p~~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        216 PLKRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             CcCCCCCHHHHHHHHHHHhCcc
Confidence            2345788999999999999753

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.6e-20  Score=157.43  Aligned_cols=205  Identities=19%  Similarity=0.191  Sum_probs=146.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHH-HhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARL-YELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |.+++++|+||||+|+||+++++.|+++|++|++++|+....  ..+ ..... ..+++++.+|+++.+++.++++    
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL--KRMKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            777889999999999999999999999999999999976532  122 22211 2367889999999998887664    


Q ss_pred             ---CcceEEEecccCCCCCCC--CccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 ---GCNGVFHIACPAPSTTVP--NPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~~~--~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                         .+|.+||+++........  +.++..+++|+.+...+++.+.+.  ..+++|++||..+.++..             
T Consensus        78 ~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------------  144 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS-------------  144 (238)
T ss_pred             HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC-------------
Confidence               369999999864322111  223566889999999888888764  235899999965432110             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                             .+...|+.+|.+.+.+++.++.+   .+++++++||+.++++.....      ....    .    ......+
T Consensus       145 -------~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~------~~~~----~----~~~~~~~  203 (238)
T PRK05786        145 -------PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER------NWKK----L----RKLGDDM  203 (238)
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh------hhhh----h----ccccCCC
Confidence                   01355999999999888887765   389999999999998742110      0000    0    0011235


Q ss_pred             ccHHHHHHHHHHhhccC
Q 020924          226 VDVRDVAEALLLAYEKA  242 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~  242 (319)
                      +..+|++++++.++...
T Consensus       204 ~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        204 APPEDFAKVIIWLLTDE  220 (238)
T ss_pred             CCHHHHHHHHHHHhccc
Confidence            78999999999999753

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.1e-20  Score=159.06  Aligned_cols=206  Identities=18%  Similarity=0.154  Sum_probs=141.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---------
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---------   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---------   75 (319)
                      ||+++||||||+||++++++|+++|++|++++|+..+..   ..   ..+.++.++.+|++|.+++..++.         
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~---~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL---AA---AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh---hh---ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            468999999999999999999999999999999865311   11   123468889999999998887442         


Q ss_pred             --CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||......     ..+.+...+++|+.++..+++.+.+    .+.++||++||..++.+.+         
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  145 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA---------  145 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC---------
Confidence              3689999998654311     1122367789999998877776654    3456999999976554332         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh--CCceEEEEecCcccCCCCCCC----CCccHHHHHHHHhcCcccc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK--TGLDVVTICPNLVLGPLLQSK----VNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~  218 (319)
                                  +...|+.+|.+.|.+++.++.+  .+++++.++|+.+-++.....    ..... .........    
T Consensus       146 ------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~----  208 (243)
T PRK07023        146 ------------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFP-MRERFRELK----  208 (243)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccch-HHHHHHHhh----
Confidence                        1466999999999999988754  589999999999866531100    00000 000000000    


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                        ....++.++|+|..++..+..+..
T Consensus       209 --~~~~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        209 --ASGALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             --hcCCCCCHHHHHHHHHHHHhcccc
Confidence              123467899999976666655443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.86  E-value=5.5e-21  Score=159.76  Aligned_cols=219  Identities=24%  Similarity=0.272  Sum_probs=151.9

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecccC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPA   87 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   87 (319)
                      |+|+||||.+|+.+++.|++.+++|.++.|+.++.....+..     .+++++.+|+.|.+++.++++++|.||.+.+..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-----LGAEVVEADYDDPESLVAALKGVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-----TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-----ccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence            799999999999999999999999999999985443333332     467899999999999999999999999887643


Q ss_pred             CCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHH
Q 020924           88 PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE  167 (319)
Q Consensus        88 ~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~  167 (319)
                      .            ........+++++|+++|+++||+ ||....+..           .....      |..++-..|..
T Consensus        76 ~------------~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~~-----------~~~~~------p~~~~~~~k~~  125 (233)
T PF05368_consen   76 H------------PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYDE-----------SSGSE------PEIPHFDQKAE  125 (233)
T ss_dssp             C------------CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTTT-----------TTTST------THHHHHHHHHH
T ss_pred             h------------hhhhhhhhhHHHhhhccccceEEE-EEecccccc-----------ccccc------ccchhhhhhhh
Confidence            2            223445788999999999999996 553322211           00000      12335567888


Q ss_pred             HHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC-ccc---cCCcccccc-cHHHHHHHHHHhhccC
Q 020924          168 AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-YES---LENKLRMIV-DVRDVAEALLLAYEKA  242 (319)
Q Consensus       168 ~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~i-~v~D~a~~~~~~~~~~  242 (319)
                      +|..+++.    +++++++||+.++.......    .. ........ ...   .++....++ +.+|+++++..++..+
T Consensus       126 ie~~l~~~----~i~~t~i~~g~f~e~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p  196 (233)
T PF05368_consen  126 IEEYLRES----GIPYTIIRPGFFMENLLPPF----AP-VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDP  196 (233)
T ss_dssp             HHHHHHHC----TSEBEEEEE-EEHHHHHTTT----HH-TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSG
T ss_pred             hhhhhhhc----cccceeccccchhhhhhhhh----cc-cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcCh
Confidence            88777664    89999999998875421111    00 00011111 111   233445564 9999999999999887


Q ss_pred             CCC--c-eEEEecccCCHHHHHHHHHHhCCC
Q 020924          243 EAE--G-RYICTAHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       243 ~~~--~-~~~~~~~~~s~~e~~~~~~~~~g~  270 (319)
                      ...  + .+.++++.+|..|+++.+.+..|+
T Consensus       197 ~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  197 EKHNNGKTIFLAGETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             GGTTEEEEEEEGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHhcCCEEEEeCCCCCCHHHHHHHHHHHHCC
Confidence            654  3 356778999999999999999884

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=5.4e-20  Score=156.18  Aligned_cols=210  Identities=16%  Similarity=0.100  Sum_probs=145.0

Q ss_pred             CCCCeEEEeCc--chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGA--GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||  ++.||.+++++|+++|++|+++.|....  ...++++.........+.+|++|.+++..+++     
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH--HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence            56789999996  6899999999999999999988765321  12222222111223467899999999987764     


Q ss_pred             --CcceEEEecccCCCC---------CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPST---------TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~---------~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        .+|++|||||.....         ...+.+...+++|+.++..+++++.+.  ..++||++||..+..+.+.      
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~------  155 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPN------  155 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCC------
Confidence              479999999975321         111234567899999999999998764  2358999999765432221      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.||.+.+.+.+.++.+   +|++++.+.||.+.++..... ..............     
T Consensus       156 ---------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~~~~~~~~~~~~~-----  214 (260)
T PRK06997        156 ---------------YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGI-KDFGKILDFVESNA-----  214 (260)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccc-cchhhHHHHHHhcC-----
Confidence                           345999999999999888765   489999999999977532211 00011111111111     


Q ss_pred             CcccccccHHHHHHHHHHhhccC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                       +...+..++|+++++.+++...
T Consensus       215 -p~~r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        215 -PLRRNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             -cccccCCHHHHHHHHHHHhCcc
Confidence             2345789999999999999753

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.3e-20  Score=156.69  Aligned_cols=226  Identities=16%  Similarity=0.132  Sum_probs=147.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------Ccc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------GCN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d   78 (319)
                      +|+++|||| |+||++++++|. +|++|++++|+.... ....+++...+.++.++.+|++|.+++..+++      .+|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENL-EAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            368999998 799999999996 899999999976432 22223333223467889999999998887764      489


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCC-CCCCc---ccCCCCCCC--
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPR-WPKGQ---IMDETCWSD--  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~-~~~~~---~~~E~~~~~--  150 (319)
                      ++|||||....   ...+..++++|+.++.++++++.+.  .-+++|++||.++...... .....   ..+..+...  
T Consensus        79 ~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (275)
T PRK06940         79 GLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP  155 (275)
T ss_pred             EEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccc
Confidence            99999997532   2345889999999999999999764  2246788888765543200 00000   000000000  


Q ss_pred             ---ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccccCCccc
Q 020924          151 ---KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       151 ---~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                         +.....+...|+.||.+.+.+.+.++.+   +|++++.+.||.+.++...... ..............      ...
T Consensus       156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------p~~  229 (275)
T PRK06940        156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS------PAG  229 (275)
T ss_pred             cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC------Ccc
Confidence               0000012456999999999888877654   4899999999999887532111 00011111221111      234


Q ss_pred             ccccHHHHHHHHHHhhccC
Q 020924          224 MIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+..++|+|+++++++...
T Consensus       230 r~~~peeia~~~~fL~s~~  248 (275)
T PRK06940        230 RPGTPDEIAALAEFLMGPR  248 (275)
T ss_pred             cCCCHHHHHHHHHHHcCcc
Confidence            5789999999999998643

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.86  E-value=2.6e-20  Score=147.00  Aligned_cols=290  Identities=15%  Similarity=0.151  Sum_probs=206.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-CCCe-EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLS-RDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~-~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      -+|||||+-|.+|..++..|.. -|.+ |+.-+......  ..+       ..-.++..|+.|...+++.+-  .+|-+|
T Consensus        45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--~V~-------~~GPyIy~DILD~K~L~eIVVn~RIdWL~  115 (366)
T KOG2774|consen   45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--NVT-------DVGPYIYLDILDQKSLEEIVVNKRIDWLV  115 (366)
T ss_pred             CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--hhc-------ccCCchhhhhhccccHHHhhcccccceee
Confidence            5899999999999999998864 4654 44433322211  111       122567789999999998875  589999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      |+.+..+.....+- ....++|+.|..|+++.|.+++. ++...|++.++++..   +..|-..-+..      .|.+.|
T Consensus       116 HfSALLSAvGE~NV-pLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtS---PRNPTPdltIQ------RPRTIY  184 (366)
T KOG2774|consen  116 HFSALLSAVGETNV-PLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTS---PRNPTPDLTIQ------RPRTIY  184 (366)
T ss_pred             eHHHHHHHhcccCC-ceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCC---CCCCCCCeeee------cCceee
Confidence            99986554332232 57789999999999999999998 777789988887653   11222211222      347889


Q ss_pred             HhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCC--CCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHH
Q 020924          162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQ--SKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~  236 (319)
                      |.||..+|.+-..+..++|+++-.+|++.+......  .....-...+..+++.+...   .++....+.+.+|+.++++
T Consensus       185 GVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~  264 (366)
T KOG2774|consen  185 GVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVI  264 (366)
T ss_pred             chhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHH
Confidence            999999999999988889999999999888753211  11122233444555554444   5678889999999999999


Q ss_pred             HhhccCCC---CceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCCC-----CCceeechHHHHH-hCCccc-cHHHHHH
Q 020924          237 LAYEKAEA---EGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEK-----EDEVMLTSEKLQK-LGWSYR-SLEETLV  306 (319)
Q Consensus       237 ~~~~~~~~---~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~-----~~~~~~d~~k~~~-lg~~~~-~~~~~l~  306 (319)
                      .++..+..   ..+||+++-.+|..|+.+.+.+.++.+++....-..     .....+|.+.++. ..|+.. .+...+.
T Consensus       265 ~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~  344 (366)
T KOG2774|consen  265 QLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIIS  344 (366)
T ss_pred             HHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHH
Confidence            99987643   227999999999999999999999976655433222     2336677777776 899887 7777676


Q ss_pred             HHHHHHHHc
Q 020924          307 DSVESYKKV  315 (319)
Q Consensus       307 ~~~~~~~~~  315 (319)
                      -++.-.+.|
T Consensus       345 ~~i~~~~~n  353 (366)
T KOG2774|consen  345 TVVAVHKSN  353 (366)
T ss_pred             HHHHHHHhh
Confidence            666655543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=4.1e-20  Score=155.89  Aligned_cols=201  Identities=18%  Similarity=0.146  Sum_probs=142.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCC--ChhhHHHHh-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLL--DYDSVKSAI-----   74 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~--~~~~~~~~~-----   74 (319)
                      +++|+|+||||+|+||.+++++|++.|++|++++|+..+... ...++... ..+++++.+|++  +.+++.+++     
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEA-VYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHH-HHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998653221 22222221 235677788886  555555443     


Q ss_pred             --cCcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCccc
Q 020924           75 --VGCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        75 --~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        ..+|+|||+|+.....     ...+.+...+++|+.++.++++++.    +.+.++||++||.....+.+.       
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-------  161 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN-------  161 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC-------
Confidence              3579999999864331     1122346678999999998888875    456789999999765543321       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.+|.+.+.+++.+++++   +++++.++|+.+-++......           ..      .
T Consensus       162 --------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------~~------~  210 (247)
T PRK08945        162 --------------WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF-----------PG------E  210 (247)
T ss_pred             --------------CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc-----------Cc------c
Confidence                          3459999999999998876654   799999999988765321110           00      0


Q ss_pred             cccccccHHHHHHHHHHhhccC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....+..++|++.++++++...
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        211 DPQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             cccCCCCHHHHHHHHHHHhCcc
Confidence            1124678999999999988644

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=5.8e-20  Score=156.92  Aligned_cols=220  Identities=13%  Similarity=0.066  Sum_probs=149.9

Q ss_pred             CCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||+  +.||.+++++|+++|++|+++.|+..  ....++++.........+.+|++|.++++++++     
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA--LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            567899999997  89999999999999999998887632  122222222111235578899999999988764     


Q ss_pred             --CcceEEEecccCCCC--------CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPST--------TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~--------~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++|||||.....        ...+.+...+++|+.++..+++++.+.  +-++||++||.....+.+.       
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~-------  158 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH-------  158 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc-------
Confidence              479999999965321        112335778899999999999988764  2358999999654332221       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.||.+.+.+++.++.+   +|++++.+.||.+.++....... .. .........     .
T Consensus       159 --------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~-~~~~~~~~~-----~  217 (272)
T PRK08159        159 --------------YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD-FR-YILKWNEYN-----A  217 (272)
T ss_pred             --------------chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc-ch-HHHHHHHhC-----C
Confidence                          345999999999988887665   48999999999997753211100 00 111111111     1


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCceE-EEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEGRY-ICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~~  252 (319)
                      +...+..++|+|+++++++....  ..|.. .+.|
T Consensus       218 p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdg  252 (272)
T PRK08159        218 PLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDS  252 (272)
T ss_pred             cccccCCHHHHHHHHHHHhCccccCccceEEEECC
Confidence            23346899999999999997543  24433 4444

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.86  E-value=3.6e-20  Score=176.05  Aligned_cols=223  Identities=19%  Similarity=0.157  Sum_probs=152.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+...... ....+..  ....+..+.+|++|.+++.++++     
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~-~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEA-VAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999997653211 1122211  11357788999999999988775     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AK-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        ++|+||||||.......    .+.+...+++|+.+...++..+..    .+ ..+||++||..++++.+.        
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~--------  562 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN--------  562 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC--------
Confidence              57999999996543211    122456788999988877765543    33 358999999876665431        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCccc-CCCCCCCCCcc---------HHHHHHHH
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVL-GPLLQSKVNTS---------SLVLIKLL  211 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~-G~~~~~~~~~~---------~~~~~~~~  211 (319)
                                   ...|+.+|.+.+.+++.++.+   .|++++.++|+.++ |.+........         ...+....
T Consensus       563 -------------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  629 (676)
T TIGR02632       563 -------------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHY  629 (676)
T ss_pred             -------------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHH
Confidence                         456999999999999988765   47999999999987 32211000000         00001101


Q ss_pred             hcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          212 KEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       212 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                           ......+.+++++|+|+++.+++....  ..| .++++|
T Consensus       630 -----~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       630 -----AKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             -----HhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence                 112245678999999999999986432  234 456654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.9e-19  Score=151.46  Aligned_cols=207  Identities=16%  Similarity=0.081  Sum_probs=143.8

Q ss_pred             CCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCC---------hhh-HHHHHhhhccCCCeEEEEccCCChhhH
Q 020924            3 LEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPS---------DEK-NARLYELEKASENLKLFKADLLDYDSV   70 (319)
Q Consensus         3 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (319)
                      +++|+|+||||||  .||++++++|+++|++|+++.|...         ... ....+++...+.++.++.+|++|.+++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            5679999999995  8999999999999999998764311         111 111222333345688899999999988


Q ss_pred             HHHhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCC
Q 020924           71 KSAIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNP  135 (319)
Q Consensus        71 ~~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~  135 (319)
                      .++++       .+|++||+||......    ..+.+...+++|+.+...+..++.+    .+.++||++||.....+.+
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV  163 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC
Confidence            87764       3699999998643321    1122456789999999888765543    3346999999976543322


Q ss_pred             CCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHh
Q 020924          136 RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK  212 (319)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~  212 (319)
                                           +...|+.+|.+.+.+++.++.+   ++++++.++||.+.++...      .........
T Consensus       164 ---------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~------~~~~~~~~~  216 (256)
T PRK12859        164 ---------------------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT------EEIKQGLLP  216 (256)
T ss_pred             ---------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC------HHHHHHHHh
Confidence                                 1456999999999998888765   5899999999998765321      111111111


Q ss_pred             cCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          213 EGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       213 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..      ....+..++|+|+++++++...
T Consensus       217 ~~------~~~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        217 MF------PFGRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             cC------CCCCCcCHHHHHHHHHHHhCcc
Confidence            11      2334568999999999998653

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8.8e-20  Score=156.08  Aligned_cols=207  Identities=19%  Similarity=0.189  Sum_probs=142.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCC-CeEEEEccCCChhhHHHHhc-------Cc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASE-NLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      |+++||||||+||++++++|+++|++|++++|+.+. .....+++...+. ...++.+|++|.+++.++++       .+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG-LAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999987643 2222233322222 34567899999988876654       47


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |+|||++|......    ..+.+...+++|+.++.++++++...     ..++||++||.....+.+.            
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~------------  147 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW------------  147 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC------------
Confidence            99999998653321    11223667899999999999998532     2358999999765443321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCC----CccHHHHHHHHhcCccccCCc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKV----NTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  221 (319)
                               ...|+.+|.+.+.+.+.++.   .+++++++++||.+.++......    ............       ..
T Consensus       148 ---------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~  211 (272)
T PRK07832        148 ---------HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-------RF  211 (272)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-------hc
Confidence                     34599999988877776653   35899999999999987533210    000011111110       01


Q ss_pred             ccccccHHHHHHHHHHhhcc
Q 020924          222 LRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~  241 (319)
                      ....+.++|+|++++.++..
T Consensus       212 ~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        212 RGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             ccCCCCHHHHHHHHHHHHhc
Confidence            23457999999999999964

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=153.67  Aligned_cols=208  Identities=15%  Similarity=0.075  Sum_probs=141.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+++||||+|+||++++++|+++|++|++++|+.... ....+++.. ..++.++.+|++|.++++++++       .+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENL-EKALKELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999999986532 222233322 2367889999999998887764       579


Q ss_pred             eEEEecccCCCC---C---CCCccchhhhhHHHHHHHHHHHH----H-hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           79 GVFHIACPAPST---T---VPNPQMELLEPAVKGTLNVVKAC----L-EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        79 ~vi~~a~~~~~~---~---~~~~~~~~~~~Nv~~~~~l~~~~----~-~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      +|||+||.....   .   ..+.+...+.+|+.++..+...+    . +.+.++||++||..+..+.+            
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~------------  146 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP------------  146 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC------------
Confidence            999999964311   1   11122345677877766555443    2 23446999999976543221            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCC--------ccHHHH-HHHHhcCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVN--------TSSLVL-IKLLKEGY  215 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~-~~~~~~~~  215 (319)
                               +...|+.+|.+.+.+++.++.++   |++++.+.||.+-++.......        ...... ......  
T Consensus       147 ---------~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  215 (259)
T PRK08340        147 ---------PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER--  215 (259)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc--
Confidence                     14569999999999999887754   7999999999997765321100        000000 111111  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccC
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                          .+.+.+..++|+|+++++++...
T Consensus       216 ----~p~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        216 ----TPLKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             ----CCccCCCCHHHHHHHHHHHcCcc
Confidence                13345789999999999999854

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-19  Score=174.47  Aligned_cols=200  Identities=18%  Similarity=0.148  Sum_probs=149.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||||+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.++++++++       
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL-DELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5678999999999999999999999999999999976532 22223332234578899999999999988775       


Q ss_pred             CcceEEEecccCCCCCC---C---CccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAPSTTV---P---NPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~---~---~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      .+|++|||||.......   .   +.+...+++|+.++.++++++.    +.+.++||++||.+++.+.+.         
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  518 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR---------  518 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC---------
Confidence            57999999996432211   1   1236778999999998877764    346679999999876554321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  .+.|+.||.+.+.+++.++.+   .+++++.++||.+.++.......                .  ..
T Consensus       519 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~----------------~--~~  568 (657)
T PRK07201        519 ------------FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR----------------Y--NN  568 (657)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc----------------c--cC
Confidence                        355999999999999887654   48999999999998875432100                0  01


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ...+.++++|+.++..+...
T Consensus       569 ~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        569 VPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             CCCCCHHHHHHHHHHHHHhC
Confidence            12578999999999987653

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.4e-19  Score=147.64  Aligned_cols=186  Identities=17%  Similarity=0.097  Sum_probs=138.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---CcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~   82 (319)
                      |+++||||+|+||++++++|+++ ++|++++|+..                  .+.+|++|.++++.+++   ++|++||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~id~lv~   61 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGKVDAVVS   61 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence            47999999999999999999998 99999998643                  25689999999988876   5899999


Q ss_pred             ecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCcccccc
Q 020924           83 IACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        83 ~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  156 (319)
                      +||.......    .+.+...+++|+.++.++++++.+.  ...+|+++||..+..+.+.                    
T Consensus        62 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------------  121 (199)
T PRK07578         62 AAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPG--------------------  121 (199)
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCC--------------------
Confidence            9996543211    1234667889999999999998764  3358999999765443321                    


Q ss_pred             CCchHHhhHHHHHHHHHHhhhh--CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKK--TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEA  234 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  234 (319)
                       ...|+.+|.+.+.+++.++.+  .|++++.++|+.+-++...         ..+.     .    ....++.++|+|++
T Consensus       122 -~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~---------~~~~-----~----~~~~~~~~~~~a~~  182 (199)
T PRK07578        122 -GASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEK---------YGPF-----F----PGFEPVPAARVALA  182 (199)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh---------hhhc-----C----CCCCCCCHHHHHHH
Confidence             456999999999988887664  5899999999988544210         0000     0    11236899999999


Q ss_pred             HHHhhccCCCCceEE
Q 020924          235 LLLAYEKAEAEGRYI  249 (319)
Q Consensus       235 ~~~~~~~~~~~~~~~  249 (319)
                      ++.+++....+.+++
T Consensus       183 ~~~~~~~~~~g~~~~  197 (199)
T PRK07578        183 YVRSVEGAQTGEVYK  197 (199)
T ss_pred             HHHHhccceeeEEec
Confidence            999998654443444

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2e-19  Score=155.84  Aligned_cols=218  Identities=14%  Similarity=0.090  Sum_probs=143.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh---------hhHHHHHhhhccCCCeEEEEccCCChhhHHH
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD---------EKNARLYELEKASENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (319)
                      +|++|+++||||+++||.+++++|++.|++|++++|+..+         ......+.+...+.++.++.+|++|.++++.
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            3667999999999999999999999999999999997421         1111222232223457789999999998887


Q ss_pred             Hhc-------CcceEEEec-ccCC-----CCC---CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccc
Q 020924           73 AIV-------GCNGVFHIA-CPAP-----STT---VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVG  132 (319)
Q Consensus        73 ~~~-------~~d~vi~~a-~~~~-----~~~---~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~  132 (319)
                      +++       .+|++|||| |...     ...   ..+.+...+++|+.+...+++++.+.    +-.+||++||.....
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence            764       479999999 6321     111   11223557789999998888887653    335899999964432


Q ss_pred             cCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHH
Q 020924          133 LNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIK  209 (319)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~  209 (319)
                      .....                  .....|+.||.+...+.+.++.+   .|++++.|.||.+-++............+..
T Consensus       165 ~~~~~------------------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~  226 (305)
T PRK08303        165 NATHY------------------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRD  226 (305)
T ss_pred             cCcCC------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhh
Confidence            11000                  01345999999999988877665   3799999999998765311000000000000


Q ss_pred             HHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          210 LLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       210 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .....    + ..+.+..++|+|.++++++...
T Consensus       227 ~~~~~----p-~~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        227 ALAKE----P-HFAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             hhccc----c-ccccCCCHHHHHHHHHHHHcCc
Confidence            00000    0 1233457999999999999765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=5.3e-20  Score=153.19  Aligned_cols=171  Identities=19%  Similarity=0.153  Sum_probs=128.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH--HHHHhhhccCCCeEEEEccCCChhhHHHHh-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN--ARLYELEKASENLKLFKADLLDYDSVKSAI-----   74 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----   74 (319)
                      .+.+|+|+|||||++||.+++.+|+++|.+++.+.|..+....  +.+.+... ..++.++++|++|.+++..++     
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~-~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGS-LEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCC-cCccEEEeCccCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999998888887664311  12222211 226999999999999999765     


Q ss_pred             --cCcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccC
Q 020924           75 --VGCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        75 --~~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .++|++|||||.......    .+.....+++|+.|+..+..++...    +-++||.+||++++.+.|.        
T Consensus        88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~--------  159 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF--------  159 (282)
T ss_pred             hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc--------
Confidence              368999999997763321    1223457899999999999988643    4469999999988765531        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCC-----ceEEEEecCcccCCC
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG-----LDVVTICPNLVLGPL  195 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~lrp~~v~G~~  195 (319)
                                   ...|+.||.+.+.+...+..+..     +.+ .+.||.|-+..
T Consensus       160 -------------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~  201 (282)
T KOG1205|consen  160 -------------RSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEF  201 (282)
T ss_pred             -------------ccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecc
Confidence                         34699999999999888877652     222 58888886653

>PRK05855 short chain dehydrogenase; Validated

Probab=99.84  E-value=6.4e-20  Score=173.53  Aligned_cols=216  Identities=15%  Similarity=0.110  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +.++++|||||||+||++++++|+++|++|++++|+.++. ......+...+.++.++.+|++|.+++.++++       
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAA-ERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5568999999999999999999999999999999976532 12222232234568899999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AK-VKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|++|||||......    ..+.+...+++|+.++.++++++..    .+ .++||++||.+++.+.+.          
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  461 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS----------  461 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC----------
Confidence            3799999999754321    1223466788999999998888653    33 258999999877654321          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccccCCc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                 ...|+.||.+.+.+++.++.+   +|++++.++||.+-++......  .......... .......  .
T Consensus       462 -----------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~--~  527 (582)
T PRK05855        462 -----------LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARR-RGRADKL--Y  527 (582)
T ss_pred             -----------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhH-Hhhhhhh--c
Confidence                       456999999999888877654   4899999999999776433210  0000000000 0000000  0


Q ss_pred             ccccccHHHHHHHHHHhhccCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ....+.++|+|++++.++.++.
T Consensus       528 ~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        528 QRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             cccCCCHHHHHHHHHHHHHcCC
Confidence            1123578999999999998754

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.84  E-value=4.4e-20  Score=145.20  Aligned_cols=217  Identities=16%  Similarity=0.139  Sum_probs=155.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |+.++|++++||+.|.||.+++++|+++|..+.++..+.++.  +...+++..  ...+.++++|+++..+++++++   
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~--~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP--EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH--HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence            788999999999999999999999999999988888776643  333333332  3578899999999999998886   


Q ss_pred             ----CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-----C--CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ----GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-----K--VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~--~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                          .+|++||.||....    .+++.++.+|+.|..+-...+..+     |  -+-||++||..+.++.+.+       
T Consensus        79 ~~fg~iDIlINgAGi~~d----kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~-------  147 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILDD----KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF-------  147 (261)
T ss_pred             HHhCceEEEEcccccccc----hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc-------
Confidence                36999999998764    457899999988776666655433     1  2369999998888766542       


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHH-----hhhhCCceEEEEecCcccCCCCCC-----CCCccHHHHHHHHhcC
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALE-----FGKKTGLDVVTICPNLVLGPLLQS-----KVNTSSLVLIKLLKEG  214 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~-----~~~~~~~~~~~lrp~~v~G~~~~~-----~~~~~~~~~~~~~~~~  214 (319)
                                    ..|+.||..+-...+.     +.++.|+++..++|+.+-......     .+.-....+...++..
T Consensus       148 --------------pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~  213 (261)
T KOG4169|consen  148 --------------PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERA  213 (261)
T ss_pred             --------------hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHc
Confidence                          3399999986554444     334469999999999886432100     0000011122222221


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCCCCceEEEecc
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAH  253 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  253 (319)
                               .--...+++..++.+++.+..+.+|.++..
T Consensus       214 ---------~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  214 ---------PKQSPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             ---------ccCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence                     124789999999999999777778977653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.84  E-value=5.5e-19  Score=150.78  Aligned_cols=206  Identities=15%  Similarity=0.110  Sum_probs=138.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhH----HHHh------
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSV----KSAI------   74 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~----~~~~------   74 (319)
                      +.++||||+|+||++++++|+++|++|+++.|+..+.......++.. .+.++.++.+|++|.+.+    ++++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999876543322222232221 123567789999998754    3332      


Q ss_pred             -cCcceEEEecccCCCCCC-C-C-------------ccchhhhhHHHHHHHHHHHHHhCC----------CCEEEEeccc
Q 020924           75 -VGCNGVFHIACPAPSTTV-P-N-------------PQMELLEPAVKGTLNVVKACLEAK----------VKRVIVVSSG  128 (319)
Q Consensus        75 -~~~d~vi~~a~~~~~~~~-~-~-------------~~~~~~~~Nv~~~~~l~~~~~~~~----------~~~iv~~SS~  128 (319)
                       ..+|+||||||....... . +             .+...+++|+.++..+++++.+..          ..++|++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             358999999996432211 0 1             134678999999999998875431          1368888885


Q ss_pred             cccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHH
Q 020924          129 VAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSL  205 (319)
Q Consensus       129 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~  205 (319)
                      ....+.+                     +..+|+.||.+.+.+++.++.+   +|++++.|+||.+.++....     ..
T Consensus       162 ~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~  215 (267)
T TIGR02685       162 MTDQPLL---------------------GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FE  215 (267)
T ss_pred             hccCCCc---------------------ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hh
Confidence            4432211                     1456999999999999988765   58999999999987653211     11


Q ss_pred             HHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          206 VLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .........+.     ...+..++|+++++++++...
T Consensus       216 ~~~~~~~~~~~-----~~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       216 VQEDYRRKVPL-----GQREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             HHHHHHHhCCC-----CcCCCCHHHHHHHHHHHhCcc
Confidence            11111111111     123569999999999999754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=7.1e-19  Score=149.04  Aligned_cols=208  Identities=18%  Similarity=0.150  Sum_probs=143.7

Q ss_pred             CCCCeEEEeCc--chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHH-HhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            3 LEKERVCVTGA--GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARL-YELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +++|+++||||  ++.||.+++++|+++|++|++++|+........+ .++   ..++.++.+|++|.++++++++    
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~   81 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVRE   81 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHH
Confidence            56789999999  8999999999999999999999886532211122 222   2356789999999998887654    


Q ss_pred             ---CcceEEEecccCCCC-----C---CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 ---GCNGVFHIACPAPST-----T---VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~-----~---~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                         .+|++|||||.....     .   ..+.+...+++|+.++..+++++...  .-++||++||... .+.+       
T Consensus        82 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~~~-------  153 (256)
T PRK07889         82 HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VAWP-------  153 (256)
T ss_pred             HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-ccCC-------
Confidence               479999999975321     1   11223456899999999999888754  2258999886431 1111       


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                    ....|+.||.+.+.+++.++.+   +|++++.+.||.+.++...... .............     
T Consensus       154 --------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~-----  213 (256)
T PRK07889        154 --------------AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP-GFELLEEGWDERA-----  213 (256)
T ss_pred             --------------ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc-CcHHHHHHHHhcC-----
Confidence                          1345999999999888887664   4899999999999876432111 0111111111111     


Q ss_pred             Cccc-ccccHHHHHHHHHHhhccC
Q 020924          220 NKLR-MIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       220 ~~~~-~~i~v~D~a~~~~~~~~~~  242 (319)
                       ... .+..++|+|+++++++...
T Consensus       214 -p~~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        214 -PLGWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             -ccccccCCHHHHHHHHHHHhCcc
Confidence             122 4679999999999999754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.7e-19  Score=146.49  Aligned_cols=190  Identities=16%  Similarity=0.104  Sum_probs=141.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----Ccce
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----GCNG   79 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~   79 (319)
                      |++++||||+|+||++++++|+++|++|++++|+....  ..+..     .+++++.+|+++.+.++.+++     .+|+
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~--~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~   73 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL--AALQA-----LGAEALALDVADPASVAGLAWKLDGEALDA   73 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH--HHHHh-----ccceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence            46899999999999999999999999999999885532  22221     246788999999998888642     3799


Q ss_pred             EEEecccCCCC--C----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           80 VFHIACPAPST--T----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        80 vi~~a~~~~~~--~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      |||+++.....  .    ..+.++..+++|+.++.++++++.+.   ..+++|++||...+++...  .           
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~-----------  140 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--G-----------  140 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--C-----------
Confidence            99999875321  1    12234778999999999999999763   2357999999765554210  0           


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhC-CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHH
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKT-GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVR  229 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  229 (319)
                           .+...|+.+|.+.+.+++.++.++ +++++.++|+.+..+....                        ...+..+
T Consensus       141 -----~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~------------------------~~~~~~~  191 (222)
T PRK06953        141 -----TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA------------------------QAALDPA  191 (222)
T ss_pred             -----CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC------------------------CCCCCHH
Confidence                 012349999999999999887664 7899999999998774221                        1135778


Q ss_pred             HHHHHHHHhhccCC
Q 020924          230 DVAEALLLAYEKAE  243 (319)
Q Consensus       230 D~a~~~~~~~~~~~  243 (319)
                      +.++.+..++....
T Consensus       192 ~~~~~~~~~~~~~~  205 (222)
T PRK06953        192 QSVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHHHhcC
Confidence            88888888776544

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.8e-19  Score=146.88  Aligned_cols=184  Identities=15%  Similarity=0.085  Sum_probs=136.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----CcceEEE
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----GCNGVFH   82 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~   82 (319)
                      +++||||+|+||++++++|+++|++|++++|+.++.. ...++     .+++++.+|++|.++++++++    .+|++||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~-~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLE-VAAKE-----LDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHh-----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            6999999999999999999999999999998754321 11111     135788899999999988775    4899999


Q ss_pred             ecccCCC---C---C---CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           83 IACPAPS---T---T---VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        83 ~a~~~~~---~---~---~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      ||+....   .   .   ..+.+...+++|+.++.++++++.+.  ..++||++||..    .+.               
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~---------------  136 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPA---------------  136 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCC---------------
Confidence            9984211   0   0   12335778999999999999999764  235899999954    110               


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccH
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV  228 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  228 (319)
                            ...|+.+|.+.+.+++.++.+   +|++++.+.||.+.++...           . ....         ..-.+
T Consensus       137 ------~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~-----------~-~~~~---------p~~~~  189 (223)
T PRK05884        137 ------GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD-----------G-LSRT---------PPPVA  189 (223)
T ss_pred             ------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh-----------h-ccCC---------CCCCH
Confidence                  345999999999999888765   4899999999998755210           0 0000         11278


Q ss_pred             HHHHHHHHHhhccC
Q 020924          229 RDVAEALLLAYEKA  242 (319)
Q Consensus       229 ~D~a~~~~~~~~~~  242 (319)
                      +|+++++.+++...
T Consensus       190 ~~ia~~~~~l~s~~  203 (223)
T PRK05884        190 AEIARLALFLTTPA  203 (223)
T ss_pred             HHHHHHHHHHcCch
Confidence            99999999998753

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.6e-19  Score=148.71  Aligned_cols=189  Identities=14%  Similarity=0.081  Sum_probs=131.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +++++++||||+|+||++++++|+++|++|++++|+...... .   ...  .....+.+|++|.+++.+.+.++|++||
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~-~---~~~--~~~~~~~~D~~~~~~~~~~~~~iDilVn   85 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE-S---NDE--SPNEWIKWECGKEESLDKQLASLDVLIL   85 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh-h---hcc--CCCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence            567899999999999999999999999999999987632111 1   111  1225678999999999999989999999


Q ss_pred             ecccCCCC-CCCCccchhhhhHHHHHHHHHHHHHhCC-------CCEEEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           83 IACPAPST-TVPNPQMELLEPAVKGTLNVVKACLEAK-------VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        83 ~a~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-------~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                      |||..... ...+.+...+++|+.++.++++++.+..       .+.++..||.+...+.                    
T Consensus        86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~--------------------  145 (245)
T PRK12367         86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA--------------------  145 (245)
T ss_pred             CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC--------------------
Confidence            99964332 2223457789999999999999886531       2234444553332110                    


Q ss_pred             ccCCchHHhhHHHHHHHH---HHhh---hhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccH
Q 020924          155 RTTNNWYCLSKTEAESEA---LEFG---KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV  228 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~---~~~~---~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  228 (319)
                        ....|+.||.+.+.+.   .+++   ...++.+..+.|+.+.++..                         ....+.+
T Consensus       146 --~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-------------------------~~~~~~~  198 (245)
T PRK12367        146 --LSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN-------------------------PIGIMSA  198 (245)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC-------------------------ccCCCCH
Confidence              1345999999975432   2222   13578888889887654320                         0114689


Q ss_pred             HHHHHHHHHhhccCCC
Q 020924          229 RDVAEALLLAYEKAEA  244 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~  244 (319)
                      +|+|+.++.++.+.+.
T Consensus       199 ~~vA~~i~~~~~~~~~  214 (245)
T PRK12367        199 DFVAKQILDQANLGLY  214 (245)
T ss_pred             HHHHHHHHHHHhcCCc
Confidence            9999999999976543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.83  E-value=9.3e-19  Score=152.59  Aligned_cols=236  Identities=17%  Similarity=0.134  Sum_probs=148.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ++++++|||||++||.+++++|+++| ++|++++|+.... .....++...+.++.++.+|++|.++++++++       
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKA-EQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999999 9999999976532 12223332223467888999999988887653       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHh----CC--CCEEEEeccccccccCC-C-CCCCcc
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLE----AK--VKRVIVVSSGVAVGLNP-R-WPKGQI  142 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~--~~~iv~~SS~~~~~~~~-~-~~~~~~  142 (319)
                      .+|++|||||.....     ...+.+...+++|+.++..+++++..    .+  .++||++||..++.... + .+.  +
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~--~  158 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPP--K  158 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCC--c
Confidence            489999999964321     11223466789999999888777654    22  36999999986643210 0 000  0


Q ss_pred             cCCCC-------CC-----CccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecCccc-CCCCCCCCCccHH
Q 020924          143 MDETC-------WS-----DKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPNLVL-GPLLQSKVNTSSL  205 (319)
Q Consensus       143 ~~E~~-------~~-----~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~v~-G~~~~~~~~~~~~  205 (319)
                      .+.++       +.     ....+..+...|+.||.+...+.++++++    .++.++.++||.+. ++...........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~  238 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT  238 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH
Confidence            00000       00     00001123466999999988888777654    37999999999985 4432211111110


Q ss_pred             HHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCceEE
Q 020924          206 VLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEGRYI  249 (319)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~  249 (319)
                      ........       ....+.++++.|+.++.++....  .+|.|.
T Consensus       239 ~~~~~~~~-------~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~  277 (314)
T TIGR01289       239 LFPPFQKY-------ITKGYVSEEEAGERLAQVVSDPKLKKSGVYW  277 (314)
T ss_pred             HHHHHHHH-------HhccccchhhhhhhhHHhhcCcccCCCceee
Confidence            00000000       01125689999999998876543  245564

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.83  E-value=5.5e-19  Score=135.49  Aligned_cols=205  Identities=19%  Similarity=0.175  Sum_probs=154.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      .+.++||||+..||++++..|.++|++|.+.+++.... ......+..+ .....+.+|+++..++...++       .+
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A-~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA-EATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH-HHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999887643 2233333332 356678899999888777554       47


Q ss_pred             ceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHhC----CC--CEEEEeccccccccCCCCCCCcccCCCC
Q 020924           78 NGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLEA----KV--KRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        78 d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ++++||||.....    ..+++|+..+.+|+.|+..+.+++.+.    +.  .+||++||+-..-++.+           
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G-----------  160 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG-----------  160 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc-----------
Confidence            9999999987643    235678999999999999999998754    22  38999999876655543           


Q ss_pred             CCCccccccCCchHHhhHHH----HHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTE----AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~----~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                ++-|+.+|..    .....++.+++ ++++..+.||.|-.|...   ..++..+.++....|.      +
T Consensus       161 ----------QtnYAAsK~GvIgftktaArEla~k-nIrvN~VlPGFI~tpMT~---~mp~~v~~ki~~~iPm------g  220 (256)
T KOG1200|consen  161 ----------QTNYAASKGGVIGFTKTAARELARK-NIRVNVVLPGFIATPMTE---AMPPKVLDKILGMIPM------G  220 (256)
T ss_pred             ----------chhhhhhcCceeeeeHHHHHHHhhc-CceEeEeccccccChhhh---hcCHHHHHHHHccCCc------c
Confidence                      3448888875    33555666664 899999999999988754   3445666666665533      4


Q ss_pred             ccccHHHHHHHHHHhhccC
Q 020924          224 MIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+-..+|+|..++++....
T Consensus       221 r~G~~EevA~~V~fLAS~~  239 (256)
T KOG1200|consen  221 RLGEAEEVANLVLFLASDA  239 (256)
T ss_pred             ccCCHHHHHHHHHHHhccc
Confidence            4567899999999998543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=9.9e-19  Score=160.08  Aligned_cols=206  Identities=18%  Similarity=0.114  Sum_probs=145.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++++++||||+|+||.+++++|+++|++|++++|.........+...    -+..++.+|++|.++++.+++       
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR----VGGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH----cCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999999886443222221111    134678899999988887664       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCC----CEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKV----KRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~----~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+|||+||......    ..+.+...+++|+.++.++.+++.....    ++||++||...+.+.++           
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~-----------  352 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG-----------  352 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC-----------
Confidence            4799999999754321    1233467789999999999999986432    68999999877655432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+++.++.+   +++.++.+.|+.+-++.....    ........+ ..    +....
T Consensus       353 ----------~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~----~~~~~~~~~-~~----~~l~~  413 (450)
T PRK08261        353 ----------QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI----PFATREAGR-RM----NSLQQ  413 (450)
T ss_pred             ----------ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc----chhHHHHHh-hc----CCcCC
Confidence                      355999999888888877654   489999999999865432211    111111111 10    11223


Q ss_pred             cccHHHHHHHHHHhhccC
Q 020924          225 IVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~  242 (319)
                      ...++|+++++.+++...
T Consensus       414 ~~~p~dva~~~~~l~s~~  431 (450)
T PRK08261        414 GGLPVDVAETIAWLASPA  431 (450)
T ss_pred             CCCHHHHHHHHHHHhChh
Confidence            346789999999998743

>PRK05599 hypothetical protein; Provisional

Probab=99.83  E-value=1.9e-18  Score=145.51  Aligned_cols=204  Identities=14%  Similarity=0.126  Sum_probs=141.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC-CCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS-ENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      |+++||||++.||.+++++|+ +|++|++++|+.++. ....+++...+ ..+.++.+|++|.++++++++       .+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAA-QGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHH-HHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999998 599999999986542 22223333222 247889999999998887653       47


Q ss_pred             ceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHH----HhCC-CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKAC----LEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~----~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |++|||||.......    .+.....+++|+.+...++..+    .+.+ .++||++||.++..+.+.            
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------------  146 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA------------  146 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC------------
Confidence            999999997543211    1112345678888877665554    3332 368999999765543321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.+|.+.+.+.+.++.+   .+++++.+.||.+.++......              +.    .  -.
T Consensus       147 ---------~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--------------~~----~--~~  197 (246)
T PRK05599        147 ---------NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--------------PA----P--MS  197 (246)
T ss_pred             ---------CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--------------CC----C--CC
Confidence                     345999999999888887664   4899999999999876421110              00    0  02


Q ss_pred             ccHHHHHHHHHHhhccCCCCceEEEec
Q 020924          226 VDVRDVAEALLLAYEKAEAEGRYICTA  252 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~~~~~~~~~  252 (319)
                      ..++|+|++++.++.+......+...+
T Consensus       198 ~~pe~~a~~~~~~~~~~~~~~~~~~~~  224 (246)
T PRK05599        198 VYPRDVAAAVVSAITSSKRSTTLWIPG  224 (246)
T ss_pred             CCHHHHHHHHHHHHhcCCCCceEEeCc
Confidence            579999999999999765433444433

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.82  E-value=1e-18  Score=152.42  Aligned_cols=198  Identities=18%  Similarity=0.130  Sum_probs=138.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCC--hhhHH---HHhcC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLD--YDSVK---SAIVG   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~--~~~~~---~~~~~   76 (319)
                      .++.++||||||+||++++++|+++|++|++++|+.++.. ...+++...  ..++..+.+|+++  .+.+.   +.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLK-DVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            3689999999999999999999999999999999865422 222223221  2357778899985  23333   33333


Q ss_pred             --cceEEEecccCCCC--C----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           77 --CNGVFHIACPAPST--T----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        77 --~d~vi~~a~~~~~~--~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        +|++|||||.....  .    ..+.+...+++|+.++..+++++..    .+.++||++||.+++...+ .       
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~-------  202 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-D-------  202 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-C-------
Confidence              56999999975321  1    1122356889999999999988764    4567999999976643110 0       


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                 ...+.|+.||.+.+.+.+.++.+   .|++++.++||.+-++.....             ..      .
T Consensus       203 -----------p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-------------~~------~  252 (320)
T PLN02780        203 -----------PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-------------RS------S  252 (320)
T ss_pred             -----------ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-------------CC------C
Confidence                       01466999999999988887665   489999999999987643210             00      0


Q ss_pred             ccccccHHHHHHHHHHhhcc
Q 020924          222 LRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~  241 (319)
                       .-...++++|+.++..+..
T Consensus       253 -~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        253 -FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             -CCCCCHHHHHHHHHHHhCC
Confidence             0135889999999999864

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.82  E-value=1.2e-18  Score=154.61  Aligned_cols=190  Identities=13%  Similarity=0.035  Sum_probs=130.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++|+|+||||||+||++++++|+++|++|++++|+.++.. ....   .....+..+.+|++|.+++.+.+.++|++|
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~-~~~~---~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLI  250 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT-LEIN---GEDLPVKTLHWQVGQEAALAELLEKVDILI  250 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHh---hcCCCeEEEEeeCCCHHHHHHHhCCCCEEE
Confidence            467899999999999999999999999999999998754321 1111   112346788899999999999999999999


Q ss_pred             EecccCCCC-CCCCccchhhhhHHHHHHHHHHHHHhC----CC----CEEEEeccccccccCCCCCCCcccCCCCCCCcc
Q 020924           82 HIACPAPST-TVPNPQMELLEPAVKGTLNVVKACLEA----KV----KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE  152 (319)
Q Consensus        82 ~~a~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~----~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  152 (319)
                      ||||..... ...+.+...+++|+.++.++++++.+.    +.    ..+|++|| +...+ +                 
T Consensus       251 nnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~-~-----------------  311 (406)
T PRK07424        251 INHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP-A-----------------  311 (406)
T ss_pred             ECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC-C-----------------
Confidence            999865332 112234678999999999999998642    21    23555544 32211 0                 


Q ss_pred             ccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHH
Q 020924          153 YCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVA  232 (319)
Q Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  232 (319)
                          ....|+.||.+.+.+..-.....++.+..+.|+.+.++.                         .....+.++|+|
T Consensus       312 ----~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~-------------------------~~~~~~spe~vA  362 (406)
T PRK07424        312 ----FSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL-------------------------NPIGVMSADWVA  362 (406)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC-------------------------CcCCCCCHHHHH
Confidence                124599999999886532222335555555555443221                         001246899999


Q ss_pred             HHHHHhhccCC
Q 020924          233 EALLLAYEKAE  243 (319)
Q Consensus       233 ~~~~~~~~~~~  243 (319)
                      +.++.++++++
T Consensus       363 ~~il~~i~~~~  373 (406)
T PRK07424        363 KQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHCCC
Confidence            99999998754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.6e-19  Score=147.38  Aligned_cols=167  Identities=20%  Similarity=0.198  Sum_probs=125.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----Ccce
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----GCNG   79 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~   79 (319)
                      ||+|+||||+|+||++++++|+++|++|++++|++....  .+...    .++.++.+|++|.+++.++++     .+|+
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~id~   74 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT--ALQAL----PGVHIEKLDMNDPASLDQLLQRLQGQRFDL   74 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH--HHHhc----cccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence            468999999999999999999999999999999876431  22222    357788899999988887765     4899


Q ss_pred             EEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           80 VFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        80 vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      |||+||.....      ...+.+...+++|+.++..+++++.+.   +..+++++||..+..+.+   .           
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~---~-----------  140 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELP---D-----------  140 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccC---C-----------
Confidence            99999875321      111223567889999999999988654   335889998854322110   0           


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCC
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPL  195 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~  195 (319)
                          ......|+.+|.+.+.+++.++.+   .+++++.++||.+-++.
T Consensus       141 ----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        141 ----GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             ----CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence                011345999999999999988765   47999999999997764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.82  E-value=1.1e-18  Score=162.72  Aligned_cols=210  Identities=17%  Similarity=0.153  Sum_probs=149.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |..++|+++||||+++||.+++++|+++|++|++++|+..... ....++   ..++.++.+|++|.+++.++++     
T Consensus         1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          1 SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERAR-ERADSL---GPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999765321 112222   2456789999999998887764     


Q ss_pred             --CcceEEEecccCCC------CCCCCccchhhhhHHHHHHHHHHHHHhC----CCC-EEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPS------TTVPNPQMELLEPAVKGTLNVVKACLEA----KVK-RVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~-~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        .+|++|||||....      ....+.+..++++|+.++..+++++.+.    +.+ +||++||..+..+.++      
T Consensus        77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~------  150 (520)
T PRK06484         77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK------  150 (520)
T ss_pred             hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC------
Confidence              47999999986321      1112335778999999999999988754    333 8999999876654331      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++....................     
T Consensus       151 ---------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-----  210 (520)
T PRK06484        151 ---------------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRI-----  210 (520)
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcC-----
Confidence                           355999999999998887665   489999999999877643211000000000111100     


Q ss_pred             CcccccccHHHHHHHHHHhhcc
Q 020924          220 NKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                       ....+..++|+++++++++..
T Consensus       211 -~~~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        211 -PLGRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             -CCCCCcCHHHHHHHHHHHhCc
Confidence             123356899999999998874

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.82  E-value=4.8e-19  Score=150.18  Aligned_cols=207  Identities=15%  Similarity=0.084  Sum_probs=142.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHH----CCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhcC----
Q 020924            7 RVCVTGAGGFLASWVVKLLLS----RDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIVG----   76 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~----   76 (319)
                      .++||||+++||.+++++|++    .|++|++++|+.... ....+++..  .+.++.++.+|++|.++++++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~-~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL-RQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH-HHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    799999999986532 222233332  123678899999999988877642    


Q ss_pred             -------cceEEEecccCCCC-C-C-----CCccchhhhhHHHHHHHHHHHHHhC-----C-CCEEEEeccccccccCCC
Q 020924           77 -------CNGVFHIACPAPST-T-V-----PNPQMELLEPAVKGTLNVVKACLEA-----K-VKRVIVVSSGVAVGLNPR  136 (319)
Q Consensus        77 -------~d~vi~~a~~~~~~-~-~-----~~~~~~~~~~Nv~~~~~l~~~~~~~-----~-~~~iv~~SS~~~~~~~~~  136 (319)
                             .|++|||||..... . .     .+.+...+++|+.++..+++.+.+.     + .++||++||...+.+.+.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence                   25899999964321 1 1     1234568999999998888877543     2 258999999766543321


Q ss_pred             CCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC--CccHHHHHHHH
Q 020924          137 WPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLL  211 (319)
Q Consensus       137 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~  211 (319)
                                           ...|+.||.+.+.+++.++.+   .+++++.++||.+-++......  ..-........
T Consensus       161 ---------------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  219 (256)
T TIGR01500       161 ---------------------WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQ  219 (256)
T ss_pred             ---------------------chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHH
Confidence                                 456999999999999988665   4799999999999765321000  00000000000


Q ss_pred             hcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          212 KEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       212 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      ..      .....+..++|+|++++.++.+
T Consensus       220 ~~------~~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       220 EL------KAKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HH------HhcCCCCCHHHHHHHHHHHHhc
Confidence            00      0233478999999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.82  E-value=3e-18  Score=141.38  Aligned_cols=202  Identities=15%  Similarity=0.163  Sum_probs=149.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      .+++.||||||++++|+.++.+|+++|..+.+.+.+.... .+..++.... ..++.+.+|+++.+++....+       
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~-~etv~~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN-EETVKEIRKI-GEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch-HHHHHHHHhc-CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999887653 3333343322 368999999999998887664       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    .++..+..+++|+.+.....++..    +..-++||.++|.++..+.++           
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g-----------  182 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG-----------  182 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc-----------
Confidence            4799999999776542    223357789999999888777665    445569999999988876643           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh------CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK------TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                ...|+.||.++...-+.+..+      .|++.+.+.|+.+-...-...                ... ..
T Consensus       183 ----------l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~----------------~~~-~~  235 (300)
T KOG1201|consen  183 ----------LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA----------------TPF-PT  235 (300)
T ss_pred             ----------chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC----------------CCC-cc
Confidence                      455999999976555544322      379999999998864321110                000 03


Q ss_pred             ccccccHHHHHHHHHHhhccCCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      +...+.++.+|+.++.++.....
T Consensus       236 l~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  236 LAPLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             ccCCCCHHHHHHHHHHHHHcCCc
Confidence            44568999999999999987654

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3e-18  Score=142.32  Aligned_cols=170  Identities=10%  Similarity=0.047  Sum_probs=124.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||++.||++++++|+++|++|++++|+.+.. ....+++...+..+..+.+|++|.++++++++     
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l-~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL-KDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999976532 22223333233457788899999998887652     


Q ss_pred             ---CcceEEEecccCCCC-CC-CC---ccchhhhhHHHHHHHHHHHHH----hCC-CCEEEEeccccccccCCCCCCCcc
Q 020924           76 ---GCNGVFHIACPAPST-TV-PN---PQMELLEPAVKGTLNVVKACL----EAK-VKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~-~~-~~---~~~~~~~~Nv~~~~~l~~~~~----~~~-~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                         .+|++|||||..... .. +.   .+...+++|+.+...+++.+.    +.+ .++||++||....   +.      
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~------  150 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QD------  150 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CC------
Confidence               589999999743221 11 11   223456778888777766554    333 4589999995322   10      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPL  195 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~  195 (319)
                                     ...|+.+|.+.+.+.+.++.+   +++++..|.||.+-++.
T Consensus       151 ---------------~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        151 ---------------LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence                           344999999999888887664   58999999999998763

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.80  E-value=9.9e-18  Score=141.61  Aligned_cols=221  Identities=17%  Similarity=0.115  Sum_probs=153.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHH--HhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARL--YELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      .+.+|+++||||+..||+++|++|++.|.+|++.+|+.+.......  ........++..+.+|+++.++.+++++    
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998775322221  1111123568899999999887776543    


Q ss_pred             ----CcceEEEecccCCCC-----CCCCccchhhhhHHHH-HHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCc
Q 020924           76 ----GCNGVFHIACPAPST-----TVPNPQMELLEPAVKG-TLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~-~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                          .+|++|||||.....     ...+.++..+++|+.| ...+..++..+    +...|+++||...+.....     
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~-----  159 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG-----  159 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC-----
Confidence                489999999976543     2234468889999994 67777766543    3457999988765543221     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                     +...|+.+|.+.+++.+.++.+   +|+++..+-||.+.++....  ...........+......
T Consensus       160 ---------------~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~--~~~~~~~~~~~~~~~~~~  222 (270)
T KOG0725|consen  160 ---------------SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAA--GLDDGEMEEFKEATDSKG  222 (270)
T ss_pred             ---------------CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcccc--ccccchhhHHhhhhcccc
Confidence                           0145999999999999988654   58999999999998886111  111111111111100001


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ......+..++|++..+.+++.....
T Consensus       223 ~~p~gr~g~~~eva~~~~fla~~~as  248 (270)
T KOG0725|consen  223 AVPLGRVGTPEEVAEAAAFLASDDAS  248 (270)
T ss_pred             ccccCCccCHHHHHHhHHhhcCcccc
Confidence            11355678999999999999987543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.80  E-value=1.2e-17  Score=139.70  Aligned_cols=204  Identities=16%  Similarity=0.106  Sum_probs=140.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh---cCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI---VGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~v   80 (319)
                      |+|+||||||+||++++++|+++|  +.|.+..|+....       .  ...+++++++|+++.++++.+.   .++|+|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------F--QHDNVQWHALDVTDEAEIKQLSEQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------c--ccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            479999999999999999999985  6666666654321       0  1246788999999998877654   468999


Q ss_pred             EEecccCCCCC----------CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           81 FHIACPAPSTT----------VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        81 i~~a~~~~~~~----------~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      |||||......          ..+.+...+++|+.++..+++.+.+.    +.++++++||.......      .+    
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~------~~----  141 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD------NR----  141 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc------CC----
Confidence            99999764210          00123457889999998888888753    34589999884321110      00    


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                              ..+...|+.+|.+.+.+++.++.+     .++++..+.||.+.++.....           ...      ..
T Consensus       142 --------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~------~~  196 (235)
T PRK09009        142 --------LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----------QQN------VP  196 (235)
T ss_pred             --------CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----------hhc------cc
Confidence                    011356999999999999887754     379999999999987753210           001      12


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCceE-EEecc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEGRY-ICTAH  253 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~~~  253 (319)
                      ...++.++|+|++++.++....  ..|.+ .+.++
T Consensus       197 ~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        197 KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            3346899999999999998753  24443 34443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.79  E-value=3.7e-18  Score=136.27  Aligned_cols=165  Identities=22%  Similarity=0.213  Sum_probs=125.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHH--HHHhhhccCCCeEEEEccCCChhhHHHHhcC------
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNA--RLYELEKASENLKLFKADLLDYDSVKSAIVG------   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   76 (319)
                      ++++||||+|+||.+++++|+++|+ .|+++.|+.......  .+..+.....++.++.+|+++.++++++++.      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999986 688888875532211  1233333345678899999999888877643      


Q ss_pred             -cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           77 -CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        77 -~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                       +|.|||+++......    ..+.+...+++|+.++.++++++.+.+.+++|++||..+.++.+.               
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~---------------  145 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPG---------------  145 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCC---------------
Confidence             699999998643221    122346778999999999999998888889999999876654421               


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCccc
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVL  192 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~  192 (319)
                            ...|+.+|.+.+.+++... +.+++++.+.|+.+-
T Consensus       146 ------~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      146 ------QANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             ------chhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence                  3459999999999996654 468999999988764

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.79  E-value=1.9e-17  Score=142.33  Aligned_cols=214  Identities=12%  Similarity=0.035  Sum_probs=141.6

Q ss_pred             CCCCCCeEEEeCc--chHHHHHHHHHHHHCCCeEEEEEcCCChhhHH--HHHh--------hhc--cCCCeEEEEccC--
Q 020924            1 MALEKERVCVTGA--GGFLASWVVKLLLSRDYFVHGTAREPSDEKNA--RLYE--------LEK--ASENLKLFKADL--   64 (319)
Q Consensus         1 m~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~--------~~~--~~~~~~~~~~Dl--   64 (319)
                      |++++|++|||||  +..||.++++.|++.|++|++ .|+.......  .+..        ...  .......+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            6788999999999  899999999999999999988 6653321100  0100        000  001146778888  


Q ss_pred             CChh------------------hHHHHhc-------CcceEEEecccCCC---C---CCCCccchhhhhHHHHHHHHHHH
Q 020924           65 LDYD------------------SVKSAIV-------GCNGVFHIACPAPS---T---TVPNPQMELLEPAVKGTLNVVKA  113 (319)
Q Consensus        65 ~~~~------------------~~~~~~~-------~~d~vi~~a~~~~~---~---~~~~~~~~~~~~Nv~~~~~l~~~  113 (319)
                      ++.+                  ++.++++       .+|++|||||....   .   ...+.+...+++|+.+...++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            3333                  5555543       47999999974321   1   12334677899999999999998


Q ss_pred             HHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEe
Q 020924          114 CLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTIC  187 (319)
Q Consensus       114 ~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lr  187 (319)
                      +...  .-.+||++||..+..+.+.                    ....|+.||.+.+.+.+.++.+    +|++++.|.
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~~p~--------------------~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~  223 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERIIPG--------------------YGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTIS  223 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCCCCC--------------------CchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEe
Confidence            8764  1269999999765443221                    0235999999999998888754    479999999


Q ss_pred             cCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          188 PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       188 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ||.+.++..... ..............      ....+..++|++.++++++...
T Consensus       224 PG~v~T~~~~~~-~~~~~~~~~~~~~~------pl~r~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        224 AGPLGSRAAKAI-GFIDDMIEYSYANA------PLQKELTADEVGNAAAFLASPL  271 (303)
T ss_pred             eCCccCchhhcc-cccHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCcc
Confidence            999988754321 11111111111111      2234678999999999999753

>PLN00015 protochlorophyllide reductase

Probab=99.77  E-value=2.3e-17  Score=143.49  Aligned_cols=231  Identities=16%  Similarity=0.123  Sum_probs=142.3

Q ss_pred             EEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------CcceE
Q 020924            9 CVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCNGV   80 (319)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   80 (319)
                      +||||+++||.+++++|+++| ++|++++|+.... .....++.....++.++.+|++|.++++++++       .+|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKA-ERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 9999999875532 22223332223467888999999998887664       47999


Q ss_pred             EEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----C--CCEEEEeccccccccCC-C-CCCCc------
Q 020924           81 FHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----K--VKRVIVVSSGVAVGLNP-R-WPKGQ------  141 (319)
Q Consensus        81 i~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~--~~~iv~~SS~~~~~~~~-~-~~~~~------  141 (319)
                      |||||.....     ...+.+...+++|+.++..+++.+.+.    +  .++||++||..+..... + .+...      
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            9999974321     112334678999999988887776543    3  46999999976542110 0 00000      


Q ss_pred             ----ccCCCC---CCCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecCccc-CCCCCCCCCccHHHHHH
Q 020924          142 ----IMDETC---WSDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPNLVL-GPLLQSKVNTSSLVLIK  209 (319)
Q Consensus       142 ----~~~E~~---~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~v~-G~~~~~~~~~~~~~~~~  209 (319)
                          ...+..   +.... ...+...|+.||.+.+...+.++++    .|+.++.++||.|. ++........ ...+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~-~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~-~~~~~~  237 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGG-EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL-FRLLFP  237 (308)
T ss_pred             hhhcccCCccchhhcccc-CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH-HHHHHH
Confidence                000000   00000 0112466999999977776766654    37999999999995 3432211100 000000


Q ss_pred             HHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCceE
Q 020924          210 LLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEGRY  248 (319)
Q Consensus       210 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~  248 (319)
                      .....      ....+..+++.|+.++.++....  ..|.|
T Consensus       238 ~~~~~------~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~  272 (308)
T PLN00015        238 PFQKY------ITKGYVSEEEAGKRLAQVVSDPSLTKSGVY  272 (308)
T ss_pred             HHHHH------HhcccccHHHhhhhhhhhccccccCCCccc
Confidence            00000      11125689999999999886533  24455

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=1.1e-17  Score=129.56  Aligned_cols=168  Identities=19%  Similarity=0.207  Sum_probs=128.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+.+-+||||||+.+||.+++++|.+.|.+|++.+|+...     +.+.+...+.+....+|+.|.++.+++.+     
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~-----L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEER-----LAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH-----HHHHHhcCcchheeeecccchhhHHHHHHHHHhh
Confidence            78889999999999999999999999999999999998663     33333334678889999999887776553     


Q ss_pred             --CcceEEEecccCCCCC---CC---CccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPSTT---VP---NPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~---~~---~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        +.+++|||||......   .+   +.....+++|+.++.+|..+...+    .-..||++||..++-+...       
T Consensus        76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~-------  148 (245)
T COG3967          76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAS-------  148 (245)
T ss_pred             CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccc-------
Confidence              4699999999654321   11   112456789999999999988765    2347999999877655432       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGP  194 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~  194 (319)
                                    .-.|+.+|.++..+...+..   ..+++|+=+-|+.|-.+
T Consensus       149 --------------~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 --------------TPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             --------------cccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                          22399999998877666644   35899999999999775

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.77  E-value=1e-16  Score=137.28  Aligned_cols=216  Identities=21%  Similarity=0.159  Sum_probs=160.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+||||||||++|++++++|+++|++|+++.|+++......        ..+++..+|+.+...+...+++.|.++++.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~   72 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISG   72 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence            47999999999999999999999999999999987543222        4689999999999999999999999999987


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ... ..     ............+..+++. .++++++++|+..+....                       ...|..+|
T Consensus        73 ~~~-~~-----~~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~-----------------------~~~~~~~~  122 (275)
T COG0702          73 LLD-GS-----DAFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAAS-----------------------PSALARAK  122 (275)
T ss_pred             ccc-cc-----cchhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCC-----------------------ccHHHHHH
Confidence            543 21     1223334444455555554 457789998875432111                       34599999


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHH-hcCccc-cCCcccccccHHHHHHHHHHhhccCC
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL-KEGYES-LENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ...|..+...    ++.++++|+..+|.....       .++.... .+.+.. .+.....++..+|++.++..++..+.
T Consensus       123 ~~~e~~l~~s----g~~~t~lr~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~  191 (275)
T COG0702         123 AAVEAALRSS----GIPYTTLRRAAFYLGAGA-------AFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA  191 (275)
T ss_pred             HHHHHHHHhc----CCCeEEEecCeeeeccch-------hHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc
Confidence            9999998884    899999998777755322       1122222 333332 34446789999999999999998775


Q ss_pred             CCc-eEEEec-ccCCHHHHHHHHHHhCCC
Q 020924          244 AEG-RYICTA-HMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       244 ~~~-~~~~~~-~~~s~~e~~~~~~~~~g~  270 (319)
                      ..+ +|.+++ ...+..++.+.+.+..|.
T Consensus       192 ~~~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         192 TAGRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             ccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence            443 787766 799999999999999984

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.77  E-value=6.1e-18  Score=133.89  Aligned_cols=152  Identities=19%  Similarity=0.205  Sum_probs=120.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChh-hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDE-KNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      |+++||||+|.||.+++++|+++| +.|+++.|+.+.. ......++.....++.++++|+++.++++++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999999999995 5788888872222 223334444445788999999999999988765       4


Q ss_pred             cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcc
Q 020924           77 CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE  152 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  152 (319)
                      +|++|||||.......    .+.+...+++|+.+...+.+++...+.++||++||.....+.+.                
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------------  144 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPG----------------  144 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTT----------------
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCC----------------
Confidence            6999999998763321    13346789999999999999999866679999999887765542                


Q ss_pred             ccccCCchHHhhHHHHHHHHHHhhhh
Q 020924          153 YCRTTNNWYCLSKTEAESEALEFGKK  178 (319)
Q Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~  178 (319)
                           ...|+.+|.+.+.+++.++++
T Consensus       145 -----~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  145 -----MSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHh
Confidence                 456999999999999988765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.75  E-value=1.4e-16  Score=121.47  Aligned_cols=201  Identities=19%  Similarity=0.188  Sum_probs=145.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |||.|+||||.+|++++++.+++||+|+++.|++.+...         -+++..++.|+.|.+.+.+.+.+.|+||..-+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~---------~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~   71 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA---------RQGVTILQKDIFDLTSLASDLAGHDAVISAFG   71 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc---------cccceeecccccChhhhHhhhcCCceEEEecc
Confidence            589999999999999999999999999999999875321         14678899999999999999999999999766


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ....+    + +.   .-......|++..+..++.|++.++.+...+-.++     .--.++|.-|      ...|..++
T Consensus        72 ~~~~~----~-~~---~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-----~rLvD~p~fP------~ey~~~A~  132 (211)
T COG2910          72 AGASD----N-DE---LHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-----TRLVDTPDFP------AEYKPEAL  132 (211)
T ss_pred             CCCCC----h-hH---HHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-----ceeecCCCCc------hhHHHHHH
Confidence            54221    1 11   12333667888888889999999998766654432     1122222222      34477777


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccCCC
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ..+|. +..+..+.+++|+.+-|+..|-|+.+..         ++..|+... ......++|+..|.|-+++.-++++.-
T Consensus       133 ~~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg---------~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h  202 (211)
T COG2910         133 AQAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTG---------NYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQH  202 (211)
T ss_pred             HHHHH-HHHHhhccCcceEEeCcHHhcCCccccC---------ceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccc
Confidence            77775 4455444569999999999998876543         222333333 333556789999999999999998754

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.75  E-value=1.5e-16  Score=136.37  Aligned_cols=224  Identities=19%  Similarity=0.122  Sum_probs=153.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh--ccCCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE--KASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      ++.+++++|||||++||.+++++|+.+|.+|+...|+.... ....+.+.  .....+.++++|+++..++....+    
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~-~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERG-EEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999997543 22233332  234578889999999988887654    


Q ss_pred             ---CcceEEEecccCCCCC--CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 ---GCNGVFHIACPAPSTT--VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~--~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                         ..|++|+|||......  ..|..+..+.+|..|...|.+.+...    ...|||++||... .....  .+....|.
T Consensus       111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~--~~~l~~~~  187 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKID--LKDLSGEK  187 (314)
T ss_pred             cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccc--hhhccchh
Confidence               4699999999876553  23446889999999988888877643    3269999999654 11111  11112222


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                      ....     .....|+.||.+......+++++.  |+.+..+.||.+.++.... ...+...+.+.+....         
T Consensus       188 ~~~~-----~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~---------  252 (314)
T KOG1208|consen  188 AKLY-----SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPL---------  252 (314)
T ss_pred             ccCc-----cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHHh---------
Confidence            1100     112359999999999999888765  6999999999998874332 1122222222221110         


Q ss_pred             cccHHHHHHHHHHhhccCCC
Q 020924          225 IVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~  244 (319)
                      +-..++-|..++.++.+++.
T Consensus       253 ~ks~~~ga~t~~~~a~~p~~  272 (314)
T KOG1208|consen  253 TKSPEQGAATTCYAALSPEL  272 (314)
T ss_pred             ccCHHHHhhheehhccCccc
Confidence            12677888888888877754

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.75  E-value=5.1e-18  Score=127.89  Aligned_cols=210  Identities=18%  Similarity=0.212  Sum_probs=153.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC---cce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG---CNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~   79 (319)
                      +.++.|++||+.-.||+.++..|.+.|.+|+++.|++....  .+-.  ..+..++.+.+|+.+-+.+.+++..   +|.
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~--sLV~--e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLL--SLVK--ETPSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHH--HHHh--hCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence            56899999999999999999999999999999999877432  2211  1234589999999988877777753   599


Q ss_pred             EEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CC-CEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           80 VFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KV-KRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        80 vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      ++|+||......    ..+..+..+++|+.+..++.+...+.    ++ +.||++||.+...+-                
T Consensus        81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~----------------  144 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL----------------  144 (245)
T ss_pred             hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc----------------
Confidence            999999654321    12334788999999999999885433    32 479999997754322                


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                           ..++.|+.+|.+.+.+.+.++-+.   ++++..+.|..++......++.-+. -....+...      ++..|..
T Consensus       145 -----~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~-K~k~mL~ri------Pl~rFaE  212 (245)
T KOG1207|consen  145 -----DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPD-KKKKMLDRI------PLKRFAE  212 (245)
T ss_pred             -----CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCch-hccchhhhC------chhhhhH
Confidence                 126779999999998888777653   6899999999998775444322111 111111111      5567899


Q ss_pred             HHHHHHHHHHhhccCCC
Q 020924          228 VRDVAEALLLAYEKAEA  244 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~  244 (319)
                      +++++.++++++.....
T Consensus       213 V~eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  213 VDEVVNAVLFLLSDNSS  229 (245)
T ss_pred             HHHHHhhheeeeecCcC
Confidence            99999999999986543

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.73  E-value=2.3e-16  Score=130.82  Aligned_cols=168  Identities=24%  Similarity=0.242  Sum_probs=129.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--------   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   75 (319)
                      ..|.|+|||+-...|..+|++|.++|+.|++....++..  +.+..... .+++..+..|++++++++++.+        
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga--e~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA--ESLRGETK-SPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH--HHHhhhhc-CCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            457899999999999999999999999999999666543  23222211 4788999999999999998764        


Q ss_pred             -CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       +.-.||||||......     ..+.+...+++|..|+.++..+....   .-+|+|++||+++-.+.|           
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p-----------  173 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP-----------  173 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc-----------
Confidence             3589999999654321     12334778899999999999988643   345999999987543332           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPL  195 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~  195 (319)
                                ...+|+.||.+.|...+...++   +|++|.++-||.+-.+.
T Consensus       174 ----------~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l  215 (322)
T KOG1610|consen  174 ----------ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNL  215 (322)
T ss_pred             ----------ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence                      1577999999999888877654   79999999999654443

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.71  E-value=7.4e-16  Score=121.57  Aligned_cols=210  Identities=22%  Similarity=0.182  Sum_probs=144.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcC-CChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTARE-PSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |++  +.|+||||+.+||..|+++|++ +|.++++..++ ++.. ...++.....+++++.++.|+++.+++..+.+   
T Consensus         1 Msp--ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a-~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~   77 (249)
T KOG1611|consen    1 MSP--KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA-ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVE   77 (249)
T ss_pred             CCC--ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh-hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHH
Confidence            555  5699999999999999999986 57776665554 5532 33333333357899999999999988887664   


Q ss_pred             ------CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHh----CCCC-----------EEEEecccc
Q 020924           76 ------GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLE----AKVK-----------RVIVVSSGV  129 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~-----------~iv~~SS~~  129 (319)
                            +.+++++|||......     ....+...+++|..++..+.+.+..    ...+           .||++||.+
T Consensus        78 ~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   78 KIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             hhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence                  4699999999754321     1223567899999999888887742    2222           699999976


Q ss_pred             ccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHH
Q 020924          130 AVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLV  206 (319)
Q Consensus       130 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~  206 (319)
                      .-.+..                  .+.+...|..||.+.-...+..+-+   .++-++.++||+|-++.....       
T Consensus       158 ~s~~~~------------------~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-------  212 (249)
T KOG1611|consen  158 GSIGGF------------------RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-------  212 (249)
T ss_pred             cccCCC------------------CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-------
Confidence            432110                  1123677999999988888877533   478899999999987753321       


Q ss_pred             HHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC--Cce-EEEecccC
Q 020924          207 LIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA--EGR-YICTAHMI  255 (319)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~~~  255 (319)
                                       ..+.+++-+..++..+.+...  .|. |+-.+.++
T Consensus       213 -----------------a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt~i  247 (249)
T KOG1611|consen  213 -----------------AALTVEESTSKLLASINKLKNEHNGGFFNRDGTPI  247 (249)
T ss_pred             -----------------cccchhhhHHHHHHHHHhcCcccCcceEccCCCcC
Confidence                             235777777777777765332  343 45444443

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.71  E-value=1.4e-16  Score=133.87  Aligned_cols=211  Identities=22%  Similarity=0.195  Sum_probs=146.5

Q ss_pred             Ccc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh--------cCcceEE
Q 020924           12 GAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI--------VGCNGVF   81 (319)
Q Consensus        12 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~~d~vi   81 (319)
                      |++  +.||++++++|+++|++|++++|+.++. ...++++... .+.+++.+|+++.+++++++        ..+|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~-~~~~~~l~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKL-ADALEELAKE-YGAEVIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHH-HHHHHHHHHH-TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHHH-cCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            666  9999999999999999999999987642 2223333221 12446999999999888774        3579999


Q ss_pred             EecccCCC----CC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           82 HIACPAPS----TT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        82 ~~a~~~~~----~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      ||++....    ..    ..+.+...+++|+.+...+++++.+.  .-.++|++||.....+.++               
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~---------------  143 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPG---------------  143 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTT---------------
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCcc---------------
Confidence            99997654    11    11234677899999999999999664  2258999999765443321               


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                            ...|+.+|.+.+.+++.++.+    +|+++..|.||.+.++..... .....+........      +.+.+..
T Consensus       144 ------~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~~~~------pl~r~~~  210 (241)
T PF13561_consen  144 ------YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELKKRI------PLGRLGT  210 (241)
T ss_dssp             ------THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHHHHS------TTSSHBE
T ss_pred             ------chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc-ccccchhhhhhhhh------ccCCCcC
Confidence                  456999999999888876542    589999999999987631100 01122222222222      4455779


Q ss_pred             HHHHHHHHHHhhccCC--CCceE-EEec
Q 020924          228 VRDVAEALLLAYEKAE--AEGRY-ICTA  252 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~--~~~~~-~~~~  252 (319)
                      ++|+|.++++++....  ..|.. .++|
T Consensus       211 ~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  211 PEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             HHHHHHHHHHHhCccccCccCCeEEECC
Confidence            9999999999998652  35543 4443

...

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.71  E-value=4.5e-16  Score=131.54  Aligned_cols=174  Identities=20%  Similarity=0.211  Sum_probs=126.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh-hHHHHHhhhccC-CCeEEEEccCCC-hhhHHHHhc--
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-KNARLYELEKAS-ENLKLFKADLLD-YDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~--   75 (319)
                      |++++|+|+||||++.||.++++.|+++|+.|+++.|+.... ............ ..+.+..+|+++ .+++..+++  
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            567889999999999999999999999999999988876642 111111111111 257778899998 877776654  


Q ss_pred             -----CcceEEEecccCCC--C---CCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 -----GCNGVFHIACPAPS--T---TVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~--~---~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                           .+|++|||||....  .   ...+.++..+++|+.+...+.+.+.... .++||++||.... ..+..       
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~-------  152 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG-------  152 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC-------
Confidence                 37999999997542  1   2223457889999999999988544321 1299999998765 33210       


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCC
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPL  195 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~  195 (319)
                                   ...|+.||.+.+.+.+.++.+   +|++++.+.||.+..+.
T Consensus       153 -------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         153 -------------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence                         245999999999888877644   58999999999666544

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=5e-15  Score=127.38  Aligned_cols=214  Identities=11%  Similarity=0.041  Sum_probs=132.7

Q ss_pred             CCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCC---------hhhHH--------------HHHhhhccCCC
Q 020924            2 ALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPS---------DEKNA--------------RLYELEKASEN   56 (319)
Q Consensus         2 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~--------------~~~~~~~~~~~   56 (319)
                      ++++|+++||||+  ..||++++++|+++|++|++.+|.+.         .....              ....+...-..
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            3678999999995  99999999999999999998765420         00000              00000000001


Q ss_pred             eEEEEccCCC--------hhhHHHHh-------cCcceEEEecccCCC---C---CCCCccchhhhhHHHHHHHHHHHHH
Q 020924           57 LKLFKADLLD--------YDSVKSAI-------VGCNGVFHIACPAPS---T---TVPNPQMELLEPAVKGTLNVVKACL  115 (319)
Q Consensus        57 ~~~~~~Dl~~--------~~~~~~~~-------~~~d~vi~~a~~~~~---~---~~~~~~~~~~~~Nv~~~~~l~~~~~  115 (319)
                      .+-+..|+++        .+++++++       ..+|++|||||....   .   ...+.+...+++|+.+..++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            1222222222        12344433       358999999985321   1   1123457788999999999999998


Q ss_pred             hC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecC
Q 020924          116 EA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPN  189 (319)
Q Consensus       116 ~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~  189 (319)
                      +.  .-+++|++||.....+.+.                    ....|+.||.+.+.+.+.++.+    +|++++.|.||
T Consensus       165 p~m~~~G~ii~iss~~~~~~~p~--------------------~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG  224 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRAVPG--------------------YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAG  224 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCcCCC--------------------ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeC
Confidence            65  2258999998765443321                    0125999999999888877654    48999999999


Q ss_pred             cccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          190 LVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       190 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .+.++..... ..............      ....+..++|++.++++++...
T Consensus       225 ~v~T~~~~~~-~~~~~~~~~~~~~~------p~~r~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        225 PLASRAGKAI-GFIERMVDYYQDWA------PLPEPMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             CccChhhhcc-cccHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCcc
Confidence            9987643211 00111111111111      2234668999999999998753

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.70  E-value=2.8e-16  Score=122.48  Aligned_cols=165  Identities=18%  Similarity=0.170  Sum_probs=125.8

Q ss_pred             CCeEEEeCcc-hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--------
Q 020924            5 KERVCVTGAG-GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--------   75 (319)
Q Consensus         5 ~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   75 (319)
                      .++|||||++ |+||.+|+++|.++|+.|++..|+.+.-.....      ..++...+.|+++++.+.....        
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~------~~gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI------QFGLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH------hhCCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            3789999865 999999999999999999999998774322221      1368999999999998887653        


Q ss_pred             CcceEEEecccCCC-CCCCCc---cchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPS-TTVPNP---QMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~-~~~~~~---~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      ..|+++|+||..-. +..+.+   .+..+++|+.|..++.++....   ..+.||+++|..++-+.+             
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp-------------  147 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP-------------  147 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc-------------
Confidence            36999999996432 221222   3567899999999999888644   234899999987665432             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCC
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLL  196 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~  196 (319)
                              ..+.|..||.++..+.+.+.-+   +|++++.+-+|.|-+.-.
T Consensus       148 --------f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia  190 (289)
T KOG1209|consen  148 --------FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIA  190 (289)
T ss_pred             --------hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccc
Confidence                    2577999999999888877533   699999999998876543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.69  E-value=6.4e-16  Score=129.76  Aligned_cols=199  Identities=18%  Similarity=0.153  Sum_probs=131.8

Q ss_pred             HHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----CcceEEEecccCCCCCCCCcc
Q 020924           21 VVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----GCNGVFHIACPAPSTTVPNPQ   96 (319)
Q Consensus        21 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~   96 (319)
                      ++++|+++|++|++++|+.....            ..+++.+|++|.+++.++++    ++|+||||||....    .++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~----~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT----APV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC----CCH
Confidence            47899999999999999866321            12457899999999998876    48999999986532    345


Q ss_pred             chhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCc------cccccCCchHHhhHHHH
Q 020924           97 MELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK------EYCRTTNNWYCLSKTEA  168 (319)
Q Consensus        97 ~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~------~~~~~~~~~Y~~sK~~~  168 (319)
                      +..+++|+.++..+++++.+.  ..++||++||.+++...+..+...++.|......      ..+....++|+.||.+.
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence            789999999999999999864  2369999999876642211000001000000000      01112357799999999


Q ss_pred             HHHHHHhh-h---hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          169 ESEALEFG-K---KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       169 e~~~~~~~-~---~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +.+.+.++ .   .+|++++.|+||.+.++..........   .......    ......+..++|+|+++++++...
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~---~~~~~~~----~~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG---QERVDSD----AKRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhh---hHhhhhc----ccccCCCCCHHHHHHHHHHHcChh
Confidence            99888777 3   358999999999999885332110000   0000000    012334678999999999988643

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.66  E-value=7.5e-15  Score=121.68  Aligned_cols=208  Identities=23%  Similarity=0.209  Sum_probs=147.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh--hccCCCeEEEEccCCChhhHHHHhcC-------
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL--EKASENLKLFKADLLDYDSVKSAIVG-------   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   76 (319)
                      .+|+||||+..||.+++.++..+|++|+++.|+..+. .+...++  ......+.+..+|+.|.++...++++       
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl-~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKL-LEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHH-HHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            4899999999999999999999999999999987753 1222222  12223467889999999999887763       


Q ss_pred             cceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           77 CNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      +|.+|||||..-.....    +.....+++|..|+.+++.++...     +..+|+.+||..+.++-.+           
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~G-----------  181 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYG-----------  181 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccc-----------
Confidence            69999999976544221    123567899999999999998754     2348999999887765543           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhh---hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGK---KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                .+.|..+|.+...+.....+   .+++.++..-|+.+..|+-.......+ ...++.        +...+
T Consensus       182 ----------ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP-~~t~ii--------~g~ss  242 (331)
T KOG1210|consen  182 ----------YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKP-EETKII--------EGGSS  242 (331)
T ss_pred             ----------ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCc-hheeee--------cCCCC
Confidence                      34599999886666555543   358999999999998886332211111 111111        12334


Q ss_pred             cccHHHHHHHHHHhhccCCC
Q 020924          225 IVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~  244 (319)
                      -+..+++|.+++.=+.+.+.
T Consensus       243 ~~~~e~~a~~~~~~~~rg~f  262 (331)
T KOG1210|consen  243 VIKCEEMAKAIVKGMKRGNF  262 (331)
T ss_pred             CcCHHHHHHHHHhHHhhcCe
Confidence            58999999999988876543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.66  E-value=4.5e-15  Score=118.75  Aligned_cols=163  Identities=23%  Similarity=0.240  Sum_probs=120.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCC--ChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-------
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREP--SDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-------   76 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   76 (319)
                      +++||||+|.||..+++.|+++| .+|+++.|+.  .......+.++...+.+++++.+|++|++++.+++..       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            68999999999999999999997 5799999982  2224456666666667899999999999999998853       


Q ss_pred             cceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcc
Q 020924           77 CNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE  152 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  152 (319)
                      ++.|||+|+........    +.....+..-+.++.+|.++......+.+|.+||.+.+.+.++                
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g----------------  145 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG----------------  145 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT----------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc----------------
Confidence            58999999976432111    1234556777899999999998888999999999998877754                


Q ss_pred             ccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcc
Q 020924          153 YCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLV  191 (319)
Q Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v  191 (319)
                           ...|+.+....+.++..... .+.++..+..+..
T Consensus       146 -----q~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~W  178 (181)
T PF08659_consen  146 -----QSAYAAANAFLDALARQRRS-RGLPAVSINWGAW  178 (181)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred             -----hHhHHHHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence                 56699999999988887655 4889888876654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.64  E-value=1.9e-15  Score=118.87  Aligned_cols=269  Identities=14%  Similarity=0.104  Sum_probs=173.9

Q ss_pred             CCeEEEeCcchHHHHHHHH-----HHHHCC----CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc
Q 020924            5 KERVCVTGAGGFLASWVVK-----LLLSRD----YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      ..+.++-+++|+|+.+|.-     ++-+.+    |+|++++|.+.+.             ++++...|..-..      -
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-------------ritw~el~~~Gip------~   72 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-------------RITWPELDFPGIP------I   72 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------------ccccchhcCCCCc------e
Confidence            3567888999999988876     444444    9999999988743             4444444432221      1


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHH-----HHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVK-----GTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~-----~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .|+..++.++...... ...|...++-|+.     .+..|+++..++.  .+..|.+|.++.|-+.    ....++|+++
T Consensus        73 sc~a~vna~g~n~l~P-~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS----~s~eY~e~~~  147 (315)
T KOG3019|consen   73 SCVAGVNAVGNNALLP-IRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPS----ESQEYSEKIV  147 (315)
T ss_pred             ehHHHHhhhhhhccCc-hhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccc----cccccccccc
Confidence            3444555554332211 1123344555554     4677888887763  4579999886654433    3456777764


Q ss_pred             CCccccccCCchHHhhHHHHH--HHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAE--SEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e--~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                      ..-      .  --.|++..|  ...+...  ..++++++|.|.|.|.+-..-..++..|  +...|+++..|+++..||
T Consensus       148 ~qg------f--d~~srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gGGa~~~M~lpF--~~g~GGPlGsG~Q~fpWI  215 (315)
T KOG3019|consen  148 HQG------F--DILSRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGGGALAMMILPF--QMGAGGPLGSGQQWFPWI  215 (315)
T ss_pred             cCC------h--HHHHHHHHHHHHHhhccC--cceeEEEEEEeEEEecCCcchhhhhhhh--hhccCCcCCCCCeeeeee
Confidence            321      1  112332222  2222221  2589999999999998754433333222  566788888999999999


Q ss_pred             cHHHHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCC---CCCCC-----CCCC-----CceeechHHHH
Q 020924          227 DVRDVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYN---YPKSF-----TEKE-----DEVMLTSEKLQ  292 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~---~~~~~-----~~~~-----~~~~~d~~k~~  292 (319)
                      |++|++..+..+++++...|+.|.. ..+.+..|+++.+.++++...   +|...     ....     .....-..|+.
T Consensus       216 Hv~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral  295 (315)
T KOG3019|consen  216 HVDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRAL  295 (315)
T ss_pred             ehHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHh
Confidence            9999999999999998888877655 699999999999999997432   22211     1111     12445566778


Q ss_pred             HhCCccc--cHHHHHHHHH
Q 020924          293 KLGWSYR--SLEETLVDSV  309 (319)
Q Consensus       293 ~lg~~~~--~~~~~l~~~~  309 (319)
                      ++||++.  .+.+++++++
T Consensus       296 ~~Gf~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  296 ELGFEFKYPYVKDALRAIM  314 (315)
T ss_pred             hcCceeechHHHHHHHHHh
Confidence            8999887  7889888765

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.63  E-value=1.1e-14  Score=152.86  Aligned_cols=171  Identities=17%  Similarity=0.122  Sum_probs=133.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChh----------------------------------------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDE----------------------------------------   42 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~----------------------------------------   42 (319)
                      +++++|||||+|+||..++++|+++ |++|++++|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            3689999999999999999999988 69999999982100                                        


Q ss_pred             ------hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------CcceEEEecccCCCCC----CCCccchhhhhHHHH
Q 020924           43 ------KNARLYELEKASENLKLFKADLLDYDSVKSAIV------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKG  106 (319)
Q Consensus        43 ------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~  106 (319)
                            ....+..+...+.++.++.+|++|.+++.++++      .+|.|||+||......    ..+.+...+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                  001122222234578899999999999888775      3799999999754321    123357789999999


Q ss_pred             HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC-CceEEE
Q 020924          107 TLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-GLDVVT  185 (319)
Q Consensus       107 ~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~  185 (319)
                      +.++++++.....++||++||..++++.++                     ...|+.+|...+.+.+.++.++ +++++.
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~g---------------------qs~YaaAkaaL~~la~~la~~~~~irV~s 2214 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGNTG---------------------QSDYAMSNDILNKAALQLKALNPSAKVMS 2214 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCCCC---------------------cHHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            999999998877789999999988876643                     4559999999998888887665 689999


Q ss_pred             EecCcccCCC
Q 020924          186 ICPNLVLGPL  195 (319)
Q Consensus       186 lrp~~v~G~~  195 (319)
                      +.||.+-|..
T Consensus      2215 I~wG~wdtgm 2224 (2582)
T TIGR02813      2215 FNWGPWDGGM 2224 (2582)
T ss_pred             EECCeecCCc
Confidence            9999987754

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.62  E-value=6e-15  Score=116.38  Aligned_cols=206  Identities=22%  Similarity=0.179  Sum_probs=156.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      .+.++.|+.||.|+++++.-.+.|+.|-.+.|+..+.-      +.++...+.++.+|......+...+.++..++-+++
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~------l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g  126 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQT------LSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG  126 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcch------hhCCCcccchhhccccccCcchhhhcCCcccHHHhc
Confidence            56899999999999999999999999999999876431      122346788899999887778888889999999988


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ....      ...+..+|-....+-..++.++|+++|+|+|- ..++ -+.+                  . ...|-.+|
T Consensus       127 gfgn------~~~m~~ing~ani~a~kaa~~~gv~~fvyISa-~d~~-~~~~------------------i-~rGY~~gK  179 (283)
T KOG4288|consen  127 GFGN------IILMDRINGTANINAVKAAAKAGVPRFVYISA-HDFG-LPPL------------------I-PRGYIEGK  179 (283)
T ss_pred             Cccc------hHHHHHhccHhhHHHHHHHHHcCCceEEEEEh-hhcC-CCCc------------------c-chhhhccc
Confidence            6544      36788899999999999999999999999986 3232 2110                  1 23699999


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCcc----HHHHHHHHhcC------ccccCCcccccccHHHHHHHH
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTS----SLVLIKLLKEG------YESLENKLRMIVDVRDVAEAL  235 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~----~~~~~~~~~~~------~~~~~~~~~~~i~v~D~a~~~  235 (319)
                      .++|..+...   ++.+-+++|||.+||...-.....+    ...+.+..+..      ....|.-.+..+.++++|.+.
T Consensus       180 R~AE~Ell~~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aa  256 (283)
T KOG4288|consen  180 REAEAELLKK---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAA  256 (283)
T ss_pred             hHHHHHHHHh---cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHH
Confidence            9999887775   4688899999999998433222222    22333333333      222566788899999999999


Q ss_pred             HHhhccCCCCce
Q 020924          236 LLAYEKAEAEGR  247 (319)
Q Consensus       236 ~~~~~~~~~~~~  247 (319)
                      +.+++++...|+
T Consensus       257 l~ai~dp~f~Gv  268 (283)
T KOG4288|consen  257 LKAIEDPDFKGV  268 (283)
T ss_pred             HHhccCCCcCce
Confidence            999999876553

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.58  E-value=6.2e-14  Score=106.20  Aligned_cols=159  Identities=17%  Similarity=0.177  Sum_probs=121.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++|.++|.||||..|+.+++++++.+  -+|+++.|+......        ....+.....|....+++...++++|+.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------t~k~v~q~~vDf~Kl~~~a~~~qg~dV~   87 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------TDKVVAQVEVDFSKLSQLATNEQGPDVL   87 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------ccceeeeEEechHHHHHHHhhhcCCceE
Confidence            678899999999999999999999987  579999998532211        1234555667887778888888899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      +.+.|.+....-   .+.++++.=+-...++++|++.||++|+.+||..+-...                       .=.
T Consensus        88 FcaLgTTRgkaG---adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sS-----------------------rFl  141 (238)
T KOG4039|consen   88 FCALGTTRGKAG---ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSS-----------------------RFL  141 (238)
T ss_pred             EEeecccccccc---cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCccc-----------------------cee
Confidence            999886544321   255677777778889999999999999999996542211                       233


Q ss_pred             HHhhHHHHHHHHHHhhhhCCc-eEEEEecCcccCCCCCCC
Q 020924          161 YCLSKTEAESEALEFGKKTGL-DVVTICPNLVLGPLLQSK  199 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~-~~~~lrp~~v~G~~~~~~  199 (319)
                      |...|...|.-+.++    ++ .++|+|||.+.|......
T Consensus       142 Y~k~KGEvE~~v~eL----~F~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  142 YMKMKGEVERDVIEL----DFKHIIILRPGPLLGERTESR  177 (238)
T ss_pred             eeeccchhhhhhhhc----cccEEEEecCcceeccccccc
Confidence            999999999887776    33 578999999999876543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.55  E-value=4.8e-13  Score=116.75  Aligned_cols=212  Identities=24%  Similarity=0.209  Sum_probs=131.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHH-HHhc----Cc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVK-SAIV----GC   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~----~~   77 (319)
                      ++.++|+|+||||.+|+-+++.|+++|+.|+++.|+..+...  +......+.+...+..|.....+.. .+..    ..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~--~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAED--LLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhh--hhcccccccccceeeeccccccchhhhhhhhccccc
Confidence            355789999999999999999999999999999998774322  2112222345566666665544333 2332    23


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccC
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      .+++-+++.....  + ....-..+...|++|++++|..+|++|+|++||+..--...  +.  +.           ...
T Consensus       155 ~~v~~~~ggrp~~--e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~--~~--~~-----------~~~  216 (411)
T KOG1203|consen  155 VIVIKGAGGRPEE--E-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ--PP--NI-----------LLL  216 (411)
T ss_pred             eeEEecccCCCCc--c-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC--Cc--hh-----------hhh
Confidence            4666666544332  1 12344578899999999999999999999999865322111  00  00           000


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~  236 (319)
                      ...+-.+|..+|..+.+    .|++++||||+...-........        .....+.. .++...-.+.-.|+|+.++
T Consensus       217 ~~~~~~~k~~~e~~~~~----Sgl~ytiIR~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~r~~vael~~  284 (411)
T KOG1203|consen  217 NGLVLKAKLKAEKFLQD----SGLPYTIIRPGGLEQDTGGQREV--------VVDDEKELLTVDGGAYSISRLDVAELVA  284 (411)
T ss_pred             hhhhhHHHHhHHHHHHh----cCCCcEEEeccccccCCCCccee--------cccCccccccccccceeeehhhHHHHHH
Confidence            12244777677766654    59999999999876432111100        00001111 1111113578899999999


Q ss_pred             HhhccCCCCc
Q 020924          237 LAYEKAEAEG  246 (319)
Q Consensus       237 ~~~~~~~~~~  246 (319)
                      .++.+.....
T Consensus       285 ~all~~~~~~  294 (411)
T KOG1203|consen  285 KALLNEAATF  294 (411)
T ss_pred             HHHhhhhhcc
Confidence            9998876655

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.50  E-value=4.8e-13  Score=111.22  Aligned_cols=171  Identities=15%  Similarity=0.137  Sum_probs=123.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhh----HHHHhcC--c
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDS----VKSAIVG--C   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~----~~~~~~~--~   77 (319)
                      ++-.+|||||..||++.+++|+++|++|++++|+.++-... .+++... +-.++++..|.++.+.    +++.+.+  +
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v-~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAV-AKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            36799999999999999999999999999999998854221 1222221 2357888899987654    5555554  5


Q ss_pred             ceEEEecccCCCC--CC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           78 NGVFHIACPAPST--TV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        78 d~vi~~a~~~~~~--~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .++|||+|.....  ..    .......+.+|+.++..+.+.....    +-+-||++||.++..+.|.           
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~-----------  196 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPL-----------  196 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChh-----------
Confidence            7999999976521  11    1122456788988887777777644    4457999999877665542           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCC
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQ  197 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~  197 (319)
                                .+.|+.||...+.....+.++   +|+.+-.+-|..|-++...
T Consensus       197 ----------~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~  239 (312)
T KOG1014|consen  197 ----------LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK  239 (312)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence                      566999999888776666544   4899999999999887644

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.48  E-value=1.7e-13  Score=108.43  Aligned_cols=207  Identities=18%  Similarity=0.155  Sum_probs=138.4

Q ss_pred             CCCCC-CeEEEeCcchHHHHHHHHHHHHCCCeE--EEEEcCCChhhHHHHHhhh-ccCCCeEEEEccCCChhhHHHHhc-
Q 020924            1 MALEK-ERVCVTGAGGFLASWVVKLLLSRDYFV--HGTAREPSDEKNARLYELE-KASENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         1 m~~~~-~~vlItGatG~iG~~l~~~L~~~g~~V--~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      |+.++ +.+|+||++..||..++..+...+-+.  ++..|....     ++.+. ..+....+..+|++....+.+..+ 
T Consensus         1 m~~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~   75 (253)
T KOG1204|consen    1 MDLNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-----LEGLKVAYGDDFVHVVGDITEEQLLGALREA   75 (253)
T ss_pred             CCcccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-----ccceEEEecCCcceechHHHHHHHHHHHHhh
Confidence            66554 679999999999999999998877553  444443332     11110 011223344456665555555443 


Q ss_pred             ------CcceEEEecccCCCC-------CCCCccchhhhhHHHHHHHHHHHHHhC--C---CCEEEEeccccccccCCCC
Q 020924           76 ------GCNGVFHIACPAPST-------TVPNPQMELLEPAVKGTLNVVKACLEA--K---VKRVIVVSSGVAVGLNPRW  137 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~~-------~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~---~~~iv~~SS~~~~~~~~~~  137 (319)
                            +-|.||||||.....       ...+.|..+++.|+.+...|...+.+.  +   .+-+|++||.+++.+-+. 
T Consensus        76 ~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~-  154 (253)
T KOG1204|consen   76 PRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS-  154 (253)
T ss_pred             hhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH-
Confidence                  359999999966532       123446788999999999999888754  2   257999999887765432 


Q ss_pred             CCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCC---CccHH---HHHH
Q 020924          138 PKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKV---NTSSL---VLIK  209 (319)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~---~~~~~---~~~~  209 (319)
                                          ...|+.+|.+.+.+.+.++.+.  ++.+..++||.+-++.+....   ...+.   +++.
T Consensus       155 --------------------wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~e  214 (253)
T KOG1204|consen  155 --------------------WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKE  214 (253)
T ss_pred             --------------------HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHH
Confidence                                5669999999999999887553  899999999999876542111   11111   2222


Q ss_pred             HHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          210 LLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       210 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..         .....+...+.++.+..++++.
T Consensus       215 l~---------~~~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  215 LK---------ESGQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             HH---------hcCCcCChhhHHHHHHHHHHhc
Confidence            22         2334678899999999998875

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=3.3e-13  Score=101.94  Aligned_cols=212  Identities=18%  Similarity=0.128  Sum_probs=151.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      .++-..+||||.+.+|.+.+++|.+.|..|.+++...++.. ...+++   +.++.+...|++++.++.+++.       
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~-~vakel---g~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA-DVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch-HHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            35678999999999999999999999999999998766532 222333   4678899999999999998875       


Q ss_pred             CcceEEEecccCCCCC----------CCCccchhhhhHHHHHHHHHHHHHhC---------CC-CEEEEeccccccccCC
Q 020924           76 GCNGVFHIACPAPSTT----------VPNPQMELLEPAVKGTLNVVKACLEA---------KV-KRVIVVSSGVAVGLNP  135 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----------~~~~~~~~~~~Nv~~~~~l~~~~~~~---------~~-~~iv~~SS~~~~~~~~  135 (319)
                      ..|..+||||......          .-+.....+++|+.|+.|++....-.         |. .-||+.-|.+++.+.-
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~  162 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT  162 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc
Confidence            3699999999643210          01123567889999999998866421         11 2588888888776654


Q ss_pred             CCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHh
Q 020924          136 RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK  212 (319)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~  212 (319)
                      +                     ...|+.||.++-.+..-.++.   .|++++.+-|+.+-.|...    .++.-++..+.
T Consensus       163 g---------------------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tplls----slpekv~~fla  217 (260)
T KOG1199|consen  163 G---------------------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS----SLPEKVKSFLA  217 (260)
T ss_pred             c---------------------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhh----hhhHHHHHHHH
Confidence            3                     466999999876655554443   2899999999987666532    33444444443


Q ss_pred             cCccccCCcccccccHHHHHHHHHHhhccCCCCce
Q 020924          213 EGYESLENKLRMIVDVRDVAEALLLAYEKAEAEGR  247 (319)
Q Consensus       213 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  247 (319)
                      .... +   ....-|+.+.+..+..+++++-.+|.
T Consensus       218 ~~ip-f---psrlg~p~eyahlvqaiienp~lnge  248 (260)
T KOG1199|consen  218 QLIP-F---PSRLGHPHEYAHLVQAIIENPYLNGE  248 (260)
T ss_pred             HhCC-C---chhcCChHHHHHHHHHHHhCcccCCe
Confidence            3322 1   22345888999999999999877663

>PRK06720 hypothetical protein; Provisional

Probab=99.42  E-value=7.1e-12  Score=98.66  Aligned_cols=129  Identities=13%  Similarity=0.050  Sum_probs=85.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++++++||||+|+||+++++.|+++|++|++++|+.... .....++...+....++.+|+++.+++.++++     
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESG-QATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999875432 12223332223457788999999988887553     


Q ss_pred             --CcceEEEecccCCCC-CCCC-ccchhhhhHHHHHHHHHHHHH----hC-------CCCEEEEeccccc
Q 020924           76 --GCNGVFHIACPAPST-TVPN-PQMELLEPAVKGTLNVVKACL----EA-------KVKRVIVVSSGVA  130 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-~~~~-~~~~~~~~Nv~~~~~l~~~~~----~~-------~~~~iv~~SS~~~  130 (319)
                        .+|++|||||..... ...+ +.......|+.++......+.    +.       ...||..+||.++
T Consensus        91 ~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         91 FSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             cCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence              589999999965532 1111 111222444444433333332    22       2357888888654

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.28  E-value=5e-11  Score=102.86  Aligned_cols=179  Identities=13%  Similarity=0.068  Sum_probs=120.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      .+|+||+|+|++|.||+.++..|+.++  .++.++++....  ...++ +.+...  .....+.+|+.++.+.++++|+|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~--g~a~D-l~~~~~--~~~v~~~td~~~~~~~l~gaDvV   80 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP--GVAAD-LSHIDT--PAKVTGYADGELWEKALRGADLV   80 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc--ccccc-hhhcCc--CceEEEecCCCchHHHhCCCCEE
Confidence            467899999999999999999998655  789999984322  21221 111111  23345666766677889999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |++||.....  .......+..|+..+.++++++++++++++|+++|-.+..-...  ....+.+.+..+      +...
T Consensus        81 VitaG~~~~~--~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~--~~~~~~~~sg~p------~~~v  150 (321)
T PTZ00325         81 LICAGVPRKP--GMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPI--AAETLKKAGVYD------PRKL  150 (321)
T ss_pred             EECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHH--HHhhhhhccCCC------hhhe
Confidence            9999975432  12347889999999999999999999999999999543211100  000111223222      2566


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCC
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQ  197 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~  197 (319)
                      ||.+-+-.-++-...+++.++....++ +.|+|....
T Consensus       151 iG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        151 FGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             eechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            888744444555566777788888887 778887654

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.23  E-value=1.1e-10  Score=93.84  Aligned_cols=180  Identities=18%  Similarity=0.161  Sum_probs=120.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-----CeEEEEEcCCChhhHHHHHhhhccCC----CeEEEEccCCChhhHHHH
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-----YFVHGTAREPSDEKNARLYELEKASE----NLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~   73 (319)
                      |..|.++|||++++||-++|.+|++..     ..+.+.+|+.++. ......++..++    +++++.+|+++..++.++
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ka-e~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A   79 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKA-EAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRA   79 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHH-HHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHH
Confidence            345789999999999999999999754     3467788887753 223333333333    688999999999888877


Q ss_pred             hc-------CcceEEEecccCCCCC-------------------------------CCCccchhhhhHHHHHHHHHHHHH
Q 020924           74 IV-------GCNGVFHIACPAPSTT-------------------------------VPNPQMELLEPAVKGTLNVVKACL  115 (319)
Q Consensus        74 ~~-------~~d~vi~~a~~~~~~~-------------------------------~~~~~~~~~~~Nv~~~~~l~~~~~  115 (319)
                      .+       ..|.|+-|||....+.                               +.|.....+++||.|...+.....
T Consensus        80 ~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~  159 (341)
T KOG1478|consen   80 SKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELE  159 (341)
T ss_pred             HHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhh
Confidence            54       4699999999754321                               123345678999999998888776


Q ss_pred             hC----CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEec
Q 020924          116 EA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICP  188 (319)
Q Consensus       116 ~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp  188 (319)
                      ..    .-.++|++||..+--..       .--|+-.     +.....+|..||.+.+.+-....+.   .|+....+.|
T Consensus       160 pll~~~~~~~lvwtSS~~a~kk~-------lsleD~q-----~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~p  227 (341)
T KOG1478|consen  160 PLLCHSDNPQLVWTSSRMARKKN-------LSLEDFQ-----HSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQP  227 (341)
T ss_pred             hHhhcCCCCeEEEEeeccccccc-------CCHHHHh-----hhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccC
Confidence            54    22389999996442111       1111110     0112355999999988655554443   3677788888


Q ss_pred             CcccCCC
Q 020924          189 NLVLGPL  195 (319)
Q Consensus       189 ~~v~G~~  195 (319)
                      |......
T Consensus       228 g~~tt~~  234 (341)
T KOG1478|consen  228 GIFTTNS  234 (341)
T ss_pred             ceeecch
Confidence            8776544

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.19  E-value=6.1e-09  Score=82.98  Aligned_cols=212  Identities=15%  Similarity=0.123  Sum_probs=138.3

Q ss_pred             CCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      .|++|++||+|-.  .-|+..+++.|.+.|.++..+..++.  ...+++++........+++||+++.+++.++|.    
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~--l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER--LEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHH--HHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            5789999999954  67999999999999999988887653  333444443322345678999999999998875    


Q ss_pred             ---CcceEEEecccCCCCC--------CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCC-CCCCCc
Q 020924           76 ---GCNGVFHIACPAPSTT--------VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNP-RWPKGQ  141 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~--------~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~-~~~~~~  141 (319)
                         .+|.+||+.|......        ..+.....+++-.-....+..+++..  .-..+|-+|    |++.. -.|   
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~r~vP---  153 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSERVVP---  153 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccceeecC---
Confidence               4799999999765321        11122334445555566667777654  223555543    22221 000   


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                     ..+.-|.+|.+.|..+++++.+   .|+++..+-.|.+-+-....- ..+..++.......    
T Consensus       154 ---------------nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI-~~f~~~l~~~e~~a----  213 (259)
T COG0623         154 ---------------NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI-GDFRKMLKENEANA----  213 (259)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc-ccHHHHHHHHHhhC----
Confidence                           1456899999999999988765   378998888877754322111 11223333322222    


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                        +++.-+..+|++..-.+++.....
T Consensus       214 --Pl~r~vt~eeVG~tA~fLlSdLss  237 (259)
T COG0623         214 --PLRRNVTIEEVGNTAAFLLSDLSS  237 (259)
T ss_pred             --CccCCCCHHHhhhhHHHHhcchhc
Confidence              556678899999999999876543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.13  E-value=8.4e-10  Score=87.43  Aligned_cols=101  Identities=22%  Similarity=0.199  Sum_probs=74.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-------cc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-------CN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~d   78 (319)
                      |+++|||||||+|. +++.|+++|++|++++|++..... ....+. ....+.++.+|++|.+++..++++       +|
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~-l~~~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLEN-VKREST-TPESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHH-HHHHhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            47999999998876 999999999999999987543211 111121 134688889999999999887753       45


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC----EEEEecc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK----RVIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~----~iv~~SS  127 (319)
                      .+|+.+                  .+.++.++..+|++.+++    ++||+=.
T Consensus        78 ~lv~~v------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~g  112 (177)
T PRK08309         78 LAVAWI------------------HSSAKDALSVVCRELDGSSETYRLFHVLG  112 (177)
T ss_pred             EEEEec------------------cccchhhHHHHHHHHccCCCCceEEEEeC
Confidence            555543                  233467899999999998    8888743

>PLN00106 malate dehydrogenase

Probab=99.13  E-value=3.2e-10  Score=97.98  Aligned_cols=175  Identities=14%  Similarity=0.098  Sum_probs=119.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      ..||+|||++|.||+.++..|+.++  .++.++++++......-   +.+...  .....++++.+++.+.++++|+|||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~D---l~~~~~--~~~i~~~~~~~d~~~~l~~aDiVVi   92 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAAD---VSHINT--PAQVRGFLGDDQLGDALKGADLVII   92 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEch---hhhCCc--CceEEEEeCCCCHHHHcCCCCEEEE
Confidence            3689999999999999999998665  48999998773221111   111111  1223355555678889999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      .||.....  .......+..|+....++.+.+.+++.+.+|+++|--+-...+-  -...+...+...      +...||
T Consensus        93 tAG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i--~t~~~~~~s~~p------~~~viG  162 (323)
T PLN00106         93 PAGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPI--AAEVLKKAGVYD------PKKLFG  162 (323)
T ss_pred             eCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHH--HHHHHHHcCCCC------cceEEE
Confidence            99975442  23347889999999999999999999999999888332100000  000111222222      367799


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCC
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPL  195 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~  195 (319)
                      .+++-.+++-..++++.+++..-++- .|+|..
T Consensus       163 ~~~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGeH  194 (323)
T PLN00106        163 VTTLDVVRANTFVAEKKGLDPADVDV-PVVGGH  194 (323)
T ss_pred             EecchHHHHHHHHHHHhCCChhheEE-EEEEeC
Confidence            99988888888889988988877754 455654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.12  E-value=5.8e-09  Score=90.96  Aligned_cols=175  Identities=15%  Similarity=0.008  Sum_probs=105.3

Q ss_pred             CCCeEEEeCcchHHHHH--HHHHHHHCCCeEEEEEcCCChhh----------HHHHH-hhhccCCCeEEEEccCCChhhH
Q 020924            4 EKERVCVTGAGGFLASW--VVKLLLSRDYFVHGTAREPSDEK----------NARLY-ELEKASENLKLFKADLLDYDSV   70 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~-~~~~~~~~~~~~~~Dl~~~~~~   70 (319)
                      .+|++||||+++.+|.+  +++.| +.|++|+++++......          ..... .....+..+..+.+|+++.+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            35899999999999999  89999 99999999886432111          01111 1222233467889999999888


Q ss_pred             HHHhc-------CcceEEEecccCCCCCC---------CCcc---------------------------chhhhhHHHHH
Q 020924           71 KSAIV-------GCNGVFHIACPAPSTTV---------PNPQ---------------------------MELLEPAVKGT  107 (319)
Q Consensus        71 ~~~~~-------~~d~vi~~a~~~~~~~~---------~~~~---------------------------~~~~~~Nv~~~  107 (319)
                      .++++       ++|++||++|......+         -.|.                           +....+.|+|.
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg  198 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG  198 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence            87764       47999999996632110         0000                           00112234443


Q ss_pred             HHHHHHH---HhCC----CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC-
Q 020924          108 LNVVKAC---LEAK----VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-  179 (319)
Q Consensus       108 ~~l~~~~---~~~~----~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-  179 (319)
                      ......+   ...+    -.++|-+|...   +...+|.                -..+.-|.+|...|..+++++.+. 
T Consensus       199 edw~~Wi~al~~a~lla~g~~~va~TY~G---~~~t~p~----------------Y~~g~mG~AKa~LE~~~r~La~~L~  259 (398)
T PRK13656        199 EDWELWIDALDEAGVLAEGAKTVAYSYIG---PELTHPI----------------YWDGTIGKAKKDLDRTALALNEKLA  259 (398)
T ss_pred             chHHHHHHHHHhcccccCCcEEEEEecCC---cceeecc----------------cCCchHHHHHHHHHHHHHHHHHHhh
Confidence            2222222   1111    12666665522   1111111                002457999999999998887653 


Q ss_pred             --CceEEEEecCcccCCCCCC
Q 020924          180 --GLDVVTICPNLVLGPLLQS  198 (319)
Q Consensus       180 --~~~~~~lrp~~v~G~~~~~  198 (319)
                        |+++.++-.+.+.+.....
T Consensus       260 ~~giran~i~~g~~~T~Ass~  280 (398)
T PRK13656        260 AKGGDAYVSVLKAVVTQASSA  280 (398)
T ss_pred             hcCCEEEEEecCcccchhhhc
Confidence              7889999888887765443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.98  E-value=4.1e-09  Score=92.27  Aligned_cols=77  Identities=26%  Similarity=0.251  Sum_probs=65.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ||+|||.|+ |+||+.++..|+++| .+|++.+|+.++.  ..+...  ..++++..+.|+.|.+++.+++++.|+|||+
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~--~~i~~~--~~~~v~~~~vD~~d~~al~~li~~~d~VIn~   75 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKC--ARIAEL--IGGKVEALQVDAADVDALVALIKDFDLVINA   75 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHH--HHHHhh--ccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence            578999999 999999999999998 9999999987743  222221  1348999999999999999999999999999


Q ss_pred             ccc
Q 020924           84 ACP   86 (319)
Q Consensus        84 a~~   86 (319)
                      +..
T Consensus        76 ~p~   78 (389)
T COG1748          76 APP   78 (389)
T ss_pred             CCc
Confidence            854

>PRK09620 hypothetical protein; Provisional

Probab=98.89  E-value=3.4e-09  Score=87.30  Aligned_cols=82  Identities=20%  Similarity=0.210  Sum_probs=56.9

Q ss_pred             CCCCeEEEeCcc----------------hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC
Q 020924            3 LEKERVCVTGAG----------------GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD   66 (319)
Q Consensus         3 ~~~~~vlItGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   66 (319)
                      |++|+||||+|.                ||+|++++++|+++|++|+++++....... ...    ....+..+.++...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-~~~----~~~~~~~V~s~~d~   75 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-DIN----NQLELHPFEGIIDL   75 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-ccC----CceeEEEEecHHHH
Confidence            478999999875                999999999999999999998864321110 000    01123445553333


Q ss_pred             hhhHHHHhc--CcceEEEecccCCC
Q 020924           67 YDSVKSAIV--GCNGVFHIACPAPS   89 (319)
Q Consensus        67 ~~~~~~~~~--~~d~vi~~a~~~~~   89 (319)
                      .+.+.+++.  ++|+|||+||....
T Consensus        76 ~~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         76 QDKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHhcccCCCEEEECccccce
Confidence            457777774  68999999998654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.84  E-value=4.7e-08  Score=85.14  Aligned_cols=116  Identities=18%  Similarity=0.154  Sum_probs=79.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-------CeEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-------YFVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      .+|+||||+|++|++++..|+..+       .+|++++++....  ....++ +.+   .......|+....++.+.+++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D-l~d---~~~~~~~~~~~~~~~~~~l~~   78 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME-LQD---CAFPLLKSVVATTDPEEAFKD   78 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee-hhh---ccccccCCceecCCHHHHhCC
Confidence            479999999999999999998744       5899999965421  111110 000   000112355445677788899


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEecc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSS  127 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS  127 (319)
                      +|+|||+||...... .+. ...++.|+.....+...+.++. .+ .+|.+|.
T Consensus        79 aDiVI~tAG~~~~~~-~~R-~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          79 VDVAILVGAMPRKEG-MER-KDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             CCEEEEeCCcCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            999999999764421 233 7889999999999999998884 33 4555554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.76  E-value=1e-07  Score=82.73  Aligned_cols=171  Identities=15%  Similarity=0.136  Sum_probs=113.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCCh--hhHHHHHhhhcc---CCCeEEEEccCCChhhHHH
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSD--EKNARLYELEKA---SENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~   72 (319)
                      -+||.|+|++|.+|+.++-.|+..|.       ++.+++++...  .....++-....   ..+++     ++  ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----IT--DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Ee--cCcHH
Confidence            36899999999999999999998774       78999885442  222222111110   01111     11  12346


Q ss_pred             HhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC-C-EEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           73 AIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV-K-RVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        73 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~-~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      .++++|+||.+||...... .+. .+.+..|+.....+.+...+++. . .+|.+|-..-...       ...-..++. 
T Consensus        75 ~~~daDivvitaG~~~k~g-~tR-~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t-------~~~~k~sg~-  144 (322)
T cd01338          75 AFKDADWALLVGAKPRGPG-MER-ADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA-------LIAMKNAPD-  144 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCC-CcH-HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH-------HHHHHHcCC-
Confidence            6789999999999754322 233 67899999999999999998873 4 4555553210000       000011110 


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCC
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLL  196 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~  196 (319)
                          ..+...||.+++..+++...++++++++...+|..+|||+..
T Consensus       145 ----~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         145 ----IPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ----CChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence                012567999999999999999999999999999999999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.74  E-value=4.1e-08  Score=81.24  Aligned_cols=91  Identities=13%  Similarity=0.136  Sum_probs=57.2

Q ss_pred             cchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC--hhhHHHHhcCcceEEEecccCCCC
Q 020924           13 AGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD--YDSVKSAIVGCNGVFHIACPAPST   90 (319)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~vi~~a~~~~~~   90 (319)
                      +|||+|++++++|+++|++|+++.|+.....        ....+++++.++-.+  .+.+.+.+.++|+|||+||.....
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~~   95 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDYT   95 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECcccccC--------CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCce
Confidence            4799999999999999999999987643110        011356666544322  245556677899999999976532


Q ss_pred             CCCCccchhhhhHHHHHHHHHHHHH
Q 020924           91 TVPNPQMELLEPAVKGTLNVVKACL  115 (319)
Q Consensus        91 ~~~~~~~~~~~~Nv~~~~~l~~~~~  115 (319)
                          +....-..++..+.++.+.++
T Consensus        96 ----~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         96 ----PVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             ----ehhhhhhhhhhhhhhhhhhhc
Confidence                111112233444455555554

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.71  E-value=7.7e-08  Score=77.87  Aligned_cols=82  Identities=18%  Similarity=0.124  Sum_probs=62.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++++|+||||.+|+.+++.|++.|++|++++|+..+.. .....+.. ..+.....+|..+.+++.++++++|+||
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~-~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~diVi  102 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQ-KAADSLRA-RFGEGVGAVETSDDAARAAAIKGADVVF  102 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHh-hcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence            467789999999999999999999999999999998864321 11122211 1134555678889899999999999999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      ++..
T Consensus       103 ~at~  106 (194)
T cd01078         103 AAGA  106 (194)
T ss_pred             ECCC
Confidence            9654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.62  E-value=2.8e-07  Score=82.88  Aligned_cols=96  Identities=28%  Similarity=0.417  Sum_probs=68.7

Q ss_pred             EEEeCcchHHHHHHHHHHHHCC-C-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            8 VCVTGAGGFLASWVVKLLLSRD-Y-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|.|| |++|+.+++.|++++ + +|++.+|+..+.... .+++  ...+++++..|+.|.+++.++++++|+||||++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~-~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~g   76 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERL-AEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAG   76 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHH-HT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHH-Hhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCc
Confidence            799999 999999999999876 4 899999987643211 1111  236899999999999999999999999999997


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEec
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS  126 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~S  126 (319)
                      ...                  ...++++|.+.|+ ++|-.|
T Consensus        77 p~~------------------~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   77 PFF------------------GEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             GGG------------------HHHHHHHHHHHT--EEEESS
T ss_pred             cch------------------hHHHHHHHHHhCC-Ceeccc
Confidence            641                  2247777777776 666643

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.60  E-value=5.7e-07  Score=77.98  Aligned_cols=115  Identities=17%  Similarity=0.123  Sum_probs=80.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH---CCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLS---RDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |||+|+||||.+|++++..|..   .++++.+++|++.. ....++ +... +....+.+  ++.+++.+.++++|+||.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alD-l~~~-~~~~~i~~--~~~~d~~~~l~~~DiVIi   75 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVD-LSHI-PTAVKIKG--FSGEDPTPALEGADVVLI   75 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehh-hhcC-CCCceEEE--eCCCCHHHHcCCCCEEEE
Confidence            5899999999999999988854   35788888887432 111111 1111 11122232  223455667789999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ++|...... .+ ....+..|+.....+++++.+++.+++|.+.|
T Consensus        76 taG~~~~~~-~~-R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         76 SAGVARKPG-MD-RSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             cCCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            999754322 22 36889999999999999999999988888887

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.57  E-value=2.2e-07  Score=82.84  Aligned_cols=75  Identities=15%  Similarity=0.082  Sum_probs=59.1

Q ss_pred             CCCCeEEEeCc----------------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC
Q 020924            3 LEKERVCVTGA----------------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD   66 (319)
Q Consensus         3 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   66 (319)
                      +++|+|+||||                ||.+|.+++++|.++|++|++++++....       .   +.+  ...+|+++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~-------~---~~~--~~~~dv~~  253 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP-------T---PAG--VKRIDVES  253 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc-------C---CCC--cEEEccCC
Confidence            67899999999                89999999999999999999998865311       0   112  23569999


Q ss_pred             hhhHHHHhc----CcceEEEecccCCC
Q 020924           67 YDSVKSAIV----GCNGVFHIACPAPS   89 (319)
Q Consensus        67 ~~~~~~~~~----~~d~vi~~a~~~~~   89 (319)
                      .+++.+++.    .+|++||+||....
T Consensus       254 ~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        254 AQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHHHhcCCCCEEEEccccccc
Confidence            887776653    58999999997654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.52  E-value=4e-07  Score=77.29  Aligned_cols=88  Identities=17%  Similarity=0.188  Sum_probs=67.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHH----CCCeEEEEEcCCChhhHHHHHhhhccC----CCeEEEEccCCChhhHHH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLS----RDYFVHGTAREPSDEKNARLYELEKAS----ENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~   72 (319)
                      |+.+.--++|.|||||-|..+++++..    .|...-+..|++.+. .+.++++....    ....++.+|..|++++.+
T Consensus         1 M~~~~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL-~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~e   79 (423)
T KOG2733|consen    1 MAAIRYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKL-QEVLEKVGEKTGTDLSSSVILIADSANEASLDE   79 (423)
T ss_pred             CCCceeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHH-HHHHHHHhhccCCCcccceEEEecCCCHHHHHH
Confidence            443334589999999999999999998    788888899987753 33444443221    223388899999999999


Q ss_pred             HhcCcceEEEecccCCC
Q 020924           73 AIVGCNGVFHIACPAPS   89 (319)
Q Consensus        73 ~~~~~d~vi~~a~~~~~   89 (319)
                      ..+++.+|+||+|+...
T Consensus        80 mak~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   80 MAKQARVIVNCVGPYRF   96 (423)
T ss_pred             HHhhhEEEEecccccee
Confidence            99999999999997654

>cd00704 MDH Malate dehydrogenase

Probab=98.48  E-value=1.9e-06  Score=74.92  Aligned_cols=105  Identities=19%  Similarity=0.179  Sum_probs=75.3

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC-------CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh-----------h
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRD-------YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY-----------D   68 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----------~   68 (319)
                      +|.|+||+|.+|+.++..|+..|       +++..++++....             ..+....|+.|.           .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~-------------~~~g~~~Dl~d~~~~~~~~~~i~~   68 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMK-------------ALEGVVMELQDCAFPLLKGVVITT   68 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccC-------------ccceeeeehhhhcccccCCcEEec
Confidence            79999999999999999998755       2588888876210             112223343332           3


Q ss_pred             hHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEec
Q 020924           69 SVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVS  126 (319)
Q Consensus        69 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~S  126 (319)
                      ...+.++++|+|||.||...... .+ -.+.+..|+...+.+...+.+++ .. .+|.+|
T Consensus        69 ~~~~~~~~aDiVVitAG~~~~~g-~t-R~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          69 DPEEAFKDVDVAILVGAFPRKPG-ME-RADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             ChHHHhCCCCEEEEeCCCCCCcC-Cc-HHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            45678899999999999754332 22 36789999999999999999884 54 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.47  E-value=1.1e-06  Score=75.60  Aligned_cols=84  Identities=12%  Similarity=0.074  Sum_probs=62.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCC--hhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPS--DEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +++++++|+|| |++|++++..|++.|++ |++++|+..  .......+++.....++.....|+.+.+++...++.+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            46789999999 89999999999999986 999999862  111222233322223455667899888888888888999


Q ss_pred             EEEecccC
Q 020924           80 VFHIACPA   87 (319)
Q Consensus        80 vi~~a~~~   87 (319)
                      |||+....
T Consensus       203 lINaTp~G  210 (289)
T PRK12548        203 LVNATLVG  210 (289)
T ss_pred             EEEeCCCC
Confidence            99987544

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.44  E-value=8.4e-07  Score=77.01  Aligned_cols=74  Identities=26%  Similarity=0.234  Sum_probs=53.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHC-C-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSR-D-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      ++.+++|+||||+|+||++++++|+++ | .+++++.|+....  ..+..        ++..+++.   ++.+++.++|+
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl--~~La~--------el~~~~i~---~l~~~l~~aDi  218 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL--QELQA--------ELGGGKIL---SLEEALPEADI  218 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH--HHHHH--------HhccccHH---hHHHHHccCCE
Confidence            357799999999999999999999864 5 6899988875422  22111        11123433   46678889999


Q ss_pred             EEEecccCC
Q 020924           80 VFHIACPAP   88 (319)
Q Consensus        80 vi~~a~~~~   88 (319)
                      |||+++...
T Consensus       219 Vv~~ts~~~  227 (340)
T PRK14982        219 VVWVASMPK  227 (340)
T ss_pred             EEECCcCCc
Confidence            999998643

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.43  E-value=2.3e-06  Score=71.69  Aligned_cols=94  Identities=14%  Similarity=0.087  Sum_probs=69.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+|||+||||. |+.++++|.+.|++|++..++.....  .+..     .+...+..+..|.+++.+.+.  ++|+|||.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~--~~~~-----~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDA   72 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKH--LYPI-----HQALTVHTGALDPQELREFLKRHSIDILVDA   72 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccc--cccc-----cCCceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence            57999999999 99999999999999999999876321  1111     122344566778888888876  58999997


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEE
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV  122 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~i  122 (319)
                      +.+.         ..      ..+.+..++|.+.++.-+
T Consensus        73 tHPf---------A~------~is~~a~~a~~~~~ipyl   96 (256)
T TIGR00715        73 THPF---------AA------QITTNATAVCKELGIPYV   96 (256)
T ss_pred             CCHH---------HH------HHHHHHHHHHHHhCCcEE
Confidence            6322         21      237788999999998533

This enzyme was found to be a monomer by gel filtration.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.40  E-value=3.3e-06  Score=77.66  Aligned_cols=79  Identities=23%  Similarity=0.192  Sum_probs=59.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++++|+|+|+|+++ +|..+++.|+++|++|++.+++..........++..  .+++++.+|..+     ....++|+|
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~--~~~~~~~~~~~~-----~~~~~~d~v   72 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE--LGIELVLGEYPE-----EFLEGVDLV   72 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh--cCCEEEeCCcch-----hHhhcCCEE
Confidence            788899999999977 999999999999999999998753322222233321  256778888765     235678999


Q ss_pred             EEecccC
Q 020924           81 FHIACPA   87 (319)
Q Consensus        81 i~~a~~~   87 (319)
                      |++++..
T Consensus        73 v~~~g~~   79 (450)
T PRK14106         73 VVSPGVP   79 (450)
T ss_pred             EECCCCC
Confidence            9998763

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.38  E-value=5e-06  Score=72.37  Aligned_cols=106  Identities=20%  Similarity=0.192  Sum_probs=76.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh-----------
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD-----------   68 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------   68 (319)
                      +|.|+|++|.+|+.++..|+..|.       +++++++++...             ..+....|+.|..           
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------ccceeEeehhcccchhcCceeccC
Confidence            589999999999999999987542       688998865531             1222333444433           


Q ss_pred             hHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEecc
Q 020924           69 SVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSS  127 (319)
Q Consensus        69 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS  127 (319)
                      ...+.++++|+|||.||.....  .......+..|+...+.+.+.+.++. .+ .+|.+|-
T Consensus        68 ~~~~~~~~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        68 DPAVAFTDVDVAILVGAFPRKE--GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             ChHHHhCCCCEEEEcCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            4457788999999999975432  22247889999999999999999984 54 4555553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.25  E-value=4.2e-06  Score=70.61  Aligned_cols=84  Identities=14%  Similarity=0.113  Sum_probs=62.1

Q ss_pred             CCCCC-CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            1 MALEK-ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         1 m~~~~-~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |.|++ ..++|-|||||.|.-++++|+.+|.+-.+..|+..+.  ..+....  ++...  ..++-++..+++.+.+..+
T Consensus         1 ~~~e~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl--~~l~~~L--G~~~~--~~p~~~p~~~~~~~~~~~V   74 (382)
T COG3268           1 MPMEREYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKL--DALRASL--GPEAA--VFPLGVPAALEAMASRTQV   74 (382)
T ss_pred             CCCCcceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHH--HHHHHhc--Ccccc--ccCCCCHHHHHHHHhcceE
Confidence            55554 4699999999999999999999999987778876643  2222211  22233  3345558899999999999


Q ss_pred             EEEecccCCCC
Q 020924           80 VFHIACPAPST   90 (319)
Q Consensus        80 vi~~a~~~~~~   90 (319)
                      |+||+|+....
T Consensus        75 VlncvGPyt~~   85 (382)
T COG3268          75 VLNCVGPYTRY   85 (382)
T ss_pred             EEecccccccc
Confidence            99999987653

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.23  E-value=4.3e-06  Score=74.43  Aligned_cols=104  Identities=14%  Similarity=0.058  Sum_probs=71.1

Q ss_pred             CCCCeEEEeCc----------------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC
Q 020924            3 LEKERVCVTGA----------------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD   66 (319)
Q Consensus         3 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   66 (319)
                      +++++|+||||                ||.+|.+++++|..+|++|+++.++....          .+..+  ...|+++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~~~--~~~~v~~  250 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPPGV--KSIKVST  250 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCCCc--EEEEecc
Confidence            67899999998                46799999999999999999988765421          01222  3468888


Q ss_pred             hhhH-HHHh----cCcceEEEecccCCCCCC---CCcc---chhhhhHHHHHHHHHHHHHhCC
Q 020924           67 YDSV-KSAI----VGCNGVFHIACPAPSTTV---PNPQ---MELLEPAVKGTLNVVKACLEAK  118 (319)
Q Consensus        67 ~~~~-~~~~----~~~d~vi~~a~~~~~~~~---~~~~---~~~~~~Nv~~~~~l~~~~~~~~  118 (319)
                      .+++ ++++    .+.|++|++||.......   ...+   ...+..|+.-+..++...++..
T Consensus       251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       251 AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            8777 5444    357999999998755321   1111   1223456666777777776543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.22  E-value=2.6e-06  Score=70.41  Aligned_cols=64  Identities=13%  Similarity=0.080  Sum_probs=45.9

Q ss_pred             cchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh-------cCcceEEEecc
Q 020924           13 AGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI-------VGCNGVFHIAC   85 (319)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~~a~   85 (319)
                      +||+||++++++|+++|++|+++++....      ..     .  ....+|+.+.+++.+++       ..+|++||+||
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l------~~-----~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRAL------KP-----E--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhhc------cc-----c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            48999999999999999999998763210      00     0  01346888877766554       35799999999


Q ss_pred             cCCC
Q 020924           86 PAPS   89 (319)
Q Consensus        86 ~~~~   89 (319)
                      ....
T Consensus        90 v~d~   93 (227)
T TIGR02114        90 VSDY   93 (227)
T ss_pred             eccc
Confidence            7543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.21  E-value=9.9e-07  Score=56.52  Aligned_cols=41  Identities=24%  Similarity=0.336  Sum_probs=26.7

Q ss_pred             CCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          275 KSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       275 ~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      ..++.+.+....|++|+++ |||+|+ +++++|+++++|+++|
T Consensus        16 ~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n   58 (62)
T PF13950_consen   16 PRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN   58 (62)
T ss_dssp             ---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred             CCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence            3455666889999999998 999999 9999999999999876

...

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.20  E-value=1.4e-05  Score=60.85  Aligned_cols=112  Identities=20%  Similarity=0.176  Sum_probs=76.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHH--HHhhhccCC-CeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNAR--LYELEKASE-NLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |||.|+|++|.+|++++-.|...+  .++..++++........  +........ ......   .++    +.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc----cccccccEE
Confidence            589999999999999999999876  67999998865433322  222222221 122222   222    346789999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      |-.||...... .+ -.+.++.|....+.+.+.+.+.+.+ .++.+|
T Consensus        74 vitag~~~~~g-~s-R~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKPG-MS-RLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSSTT-SS-HHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEecccccccc-cc-HHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            99998754322 22 3678899999999999999998754 455544

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.16  E-value=0.00026  Score=64.81  Aligned_cols=204  Identities=19%  Similarity=0.137  Sum_probs=124.3

Q ss_pred             CCCeEEEeCcc-hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc----CCCeEEEEccCCChhhHHHHhc---
Q 020924            4 EKERVCVTGAG-GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA----SENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         4 ~~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      ..+.+|||||+ |-||..++..|++-|..|+++.-+.+......-..+...    +..+.++..+..++.+++++++   
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            45789999987 999999999999999999999887776544443333322    2346777788887777777652   


Q ss_pred             ------------------CcceEEEecccCCCCCCC--Cc-cchhhhhHHHHHHHHHHHHHhCC----CC---EEEEecc
Q 020924           76 ------------------GCNGVFHIACPAPSTTVP--NP-QMELLEPAVKGTLNVVKACLEAK----VK---RVIVVSS  127 (319)
Q Consensus        76 ------------------~~d~vi~~a~~~~~~~~~--~~-~~~~~~~Nv~~~~~l~~~~~~~~----~~---~iv~~SS  127 (319)
                                        .+|.+|-+|++.-.....  .+ -+..+++=+....+++-...+.+    +.   ++|...|
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS  554 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS  554 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence                              148999999876443211  11 12233444444555555444332    21   5666666


Q ss_pred             cc-ccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC----CceEEEEecCcccCCCCCCCCCc
Q 020924          128 GV-AVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT----GLDVVTICPNLVLGPLLQSKVNT  202 (319)
Q Consensus       128 ~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~G~~~~~~~~~  202 (319)
                      .- +.++                       ....||.+|.+.|.++..|..+.    .+.++..+.|.+-|.+.-.....
T Consensus       555 PNrG~FG-----------------------gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndi  611 (866)
T COG4982         555 PNRGMFG-----------------------GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDI  611 (866)
T ss_pred             CCCCccC-----------------------CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcch
Confidence            31 1111                       13559999999999999886543    24455555566655443222123


Q ss_pred             cHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          203 SSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      +...+.++          ..+.| +.+++|..++.++..
T Consensus       612 iv~aiEk~----------GV~ty-S~~EmA~~LLgL~sa  639 (866)
T COG4982         612 IVAAIEKA----------GVRTY-STDEMAFNLLGLASA  639 (866)
T ss_pred             hHHHHHHh----------Cceec-CHHHHHHHHHhhccH
Confidence            33222221          22333 677888888877764

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.12  E-value=0.0019  Score=49.13  Aligned_cols=186  Identities=19%  Similarity=0.197  Sum_probs=105.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC---hhhHH----HHhc--
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD---YDSVK----SAIV--   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~----~~~~--   75 (319)
                      -.+|+|-||-|-+|+++++.+..++|-|.-++..+.+..           ..-.++..|-+=   .+++.    ..+.  
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            358999999999999999999999999988887665321           111222233211   11222    2232  


Q ss_pred             CcceEEEecccCCCCCCCC-----ccchhhhhHHHHHHHHHHHHHhC-CCCEEEEecc-ccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTTVPN-----PQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSS-GVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~-----~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS-~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      ++|.|++.||-........     .-+.+++-.+....--...+.++ ...-++.+.. ..+..+.|+            
T Consensus        72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPg------------  139 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPG------------  139 (236)
T ss_pred             ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCc------------
Confidence            5799999998654432211     11333333333332222223222 2223444433 334444432            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh-CCc----eEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC-cc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK-TGL----DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN-KL  222 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~----~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  222 (319)
                               .-.||.+|.+..++++.++.+ .|+    -+..+-|-.+-.|..+.+                  .++ ..
T Consensus       140 ---------MIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw------------------MP~ADf  192 (236)
T KOG4022|consen  140 ---------MIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW------------------MPNADF  192 (236)
T ss_pred             ---------ccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc------------------CCCCcc
Confidence                     334999999999999998654 344    345555666656653322                  111 34


Q ss_pred             cccccHHHHHHHHHHhhc
Q 020924          223 RMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~  240 (319)
                      ..|.+..-+++.++.-..
T Consensus       193 ssWTPL~fi~e~flkWtt  210 (236)
T KOG4022|consen  193 SSWTPLSFISEHFLKWTT  210 (236)
T ss_pred             cCcccHHHHHHHHHHHhc
Confidence            457777778877776654

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.06  E-value=0.0002  Score=62.36  Aligned_cols=116  Identities=15%  Similarity=0.131  Sum_probs=79.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHH--hhhccCCCeEEEEccCCChhhHHHHhcC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLY--ELEKASENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      |+-.++||.|+|+ |.+|+.++-.|+..|.  ++.+++++........++  .......++....   .+   . +.+++
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~---~-~~~~~   73 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD---Y-SDCKD   73 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC---H-HHhCC
Confidence            4555689999998 9999999999998885  799999977654333322  2111111222221   12   2 34789


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      +|+||-.||...... .+. .+.+..|....+.+++.+.+++.+ .+|.+|
T Consensus        74 adivIitag~~~k~g-~~R-~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         74 ADLVVITAGAPQKPG-ETR-LDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CCEEEEecCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            999999998753322 222 678999999999999999988654 455544

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.03  E-value=5.7e-05  Score=62.40  Aligned_cols=74  Identities=19%  Similarity=0.165  Sum_probs=59.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      |+++|.|+ |-+|+.+++.|.+.|++|+++++++..... .+.    .......+.+|-+|++.++++ +.++|+++-..
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~-~~~----~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEE-FLA----DELDTHVVIGDATDEDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHH-Hhh----hhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence            57899988 999999999999999999999988764321 111    113578899999999999998 77899998765


Q ss_pred             c
Q 020924           85 C   85 (319)
Q Consensus        85 ~   85 (319)
                      +
T Consensus        75 ~   75 (225)
T COG0569          75 G   75 (225)
T ss_pred             C
Confidence            4

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.00  E-value=3.4e-05  Score=61.40  Aligned_cols=75  Identities=13%  Similarity=0.113  Sum_probs=48.3

Q ss_pred             CCCCeEEEeCc----------------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC
Q 020924            3 LEKERVCVTGA----------------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD   66 (319)
Q Consensus         3 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   66 (319)
                      +++|+||||+|                ||-.|.++++++..+|++|+.+..+..-.          .+++++.+.+  ..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~----------~p~~~~~i~v--~s   68 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP----------PPPGVKVIRV--ES   68 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEEE---SS
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc----------ccccceEEEe--cc
Confidence            46899999974                69999999999999999999998774311          1246666654  34


Q ss_pred             hhhH----HHHhcCcceEEEecccCCC
Q 020924           67 YDSV----KSAIVGCNGVFHIACPAPS   89 (319)
Q Consensus        67 ~~~~----~~~~~~~d~vi~~a~~~~~   89 (319)
                      .+++    .+.+.+.|++||+||+...
T Consensus        69 a~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   69 AEEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hhhhhhhhccccCcceeEEEecchhhe
Confidence            4333    3445578999999998765

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.98  E-value=4.4e-05  Score=57.77  Aligned_cols=77  Identities=22%  Similarity=0.198  Sum_probs=54.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++++++++|.|+ |..|+.++.+|.+.|.+ |++++|+.++.  ..+.+.. ....+.++.     .+++.+.+.++|+|
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra--~~l~~~~-~~~~~~~~~-----~~~~~~~~~~~Div   79 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERA--EALAEEF-GGVNIEAIP-----LEDLEEALQEADIV   79 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHH--HHHHHHH-TGCSEEEEE-----GGGHCHHHHTESEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHH--HHHHHHc-Cccccceee-----HHHHHHHHhhCCeE
Confidence            357899999998 88999999999999976 99999986642  2332221 112344433     23455778899999


Q ss_pred             EEecccC
Q 020924           81 FHIACPA   87 (319)
Q Consensus        81 i~~a~~~   87 (319)
                      |++.+..
T Consensus        80 I~aT~~~   86 (135)
T PF01488_consen   80 INATPSG   86 (135)
T ss_dssp             EE-SSTT
T ss_pred             EEecCCC
Confidence            9987643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.90  E-value=4.7e-05  Score=67.76  Aligned_cols=102  Identities=22%  Similarity=0.306  Sum_probs=64.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH-HhcCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS-AIVGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vi   81 (319)
                      ++++|.|.||||++|+.+++.|.++ +++|..+.++....+  .+...     ..+....|+.+.++++. .++++|+||
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~--~i~~~-----~~~l~~~~~~~~~~~~~~~~~~~DvVf  109 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQ--SFGSV-----FPHLITQDLPNLVAVKDADFSDVDAVF  109 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCC--Cchhh-----CccccCccccceecCCHHHhcCCCEEE
Confidence            3468999999999999999999987 689999887543221  11100     11122244443333332 257899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVG  132 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~  132 (319)
                      -+.+..                  .+..++..+ +.+ .++|-+||...+-
T Consensus       110 ~Alp~~------------------~s~~i~~~~-~~g-~~VIDlSs~fRl~  140 (381)
T PLN02968        110 CCLPHG------------------TTQEIIKAL-PKD-LKIVDLSADFRLR  140 (381)
T ss_pred             EcCCHH------------------HHHHHHHHH-hCC-CEEEEcCchhccC
Confidence            876321                  244566665 355 4899999976543

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.88  E-value=0.00018  Score=62.51  Aligned_cols=115  Identities=20%  Similarity=0.218  Sum_probs=74.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCC--ChhhHHHHH--hh-hccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREP--SDEKNARLY--EL-EKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~--~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |+|.|+|+||.+|+.++..|+..|+  +|++++|+.  +......++  .. ...+....+   ..+  .+. +.++++|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i---~~~--~d~-~~l~~aD   74 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEI---KIS--SDL-SDVAGSD   74 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEE---EEC--CCH-HHhCCCC
Confidence            5899999999999999999999886  499999854  221111111  00 000111111   111  122 3488999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSG  128 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~  128 (319)
                      +||-++|.....  ..+....++.|+.....+.+.+.+.+.+ .+|.+++.
T Consensus        75 iViitag~p~~~--~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          75 IVIITAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             EEEEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            999999864332  1122577889999999999998877543 67777764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.87  E-value=0.00043  Score=60.17  Aligned_cols=112  Identities=18%  Similarity=0.142  Sum_probs=75.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHH--Hhhhcc-CCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARL--YELEKA-SENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++|.|.|+ |.+|+.++..|+.+|  ++|.+++|+.........  ...... +.......   .+.    +.+.++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence            47999996 999999999999998  689999998775432222  111111 11222221   222    235799999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |.++|...... .+. ...++.|+.....+.+.+.+++.+ .+|.+|-
T Consensus        73 Iitag~~~~~g-~~R-~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          73 VITAGAPQKPG-ETR-LDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             EEccCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99998653321 233 678999999999999999988654 4555543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.84  E-value=0.00018  Score=66.19  Aligned_cols=79  Identities=16%  Similarity=0.061  Sum_probs=53.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-Ccce
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-GCNG   79 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~   79 (319)
                      |++++++|+|||++| +|..+++.|++.|++|++.+++..... .....+..  .++++..+..  ...   .+. .+|.
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~-~~~~~l~~--~g~~~~~~~~--~~~---~~~~~~d~   71 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSEN-PEAQELLE--EGIKVICGSH--PLE---LLDEDFDL   71 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccch-hHHHHHHh--cCCEEEeCCC--CHH---HhcCcCCE
Confidence            888899999999987 999999999999999999987653221 11122211  2445544321  112   233 4899


Q ss_pred             EEEecccCC
Q 020924           80 VFHIACPAP   88 (319)
Q Consensus        80 vi~~a~~~~   88 (319)
                      ||..+|...
T Consensus        72 vV~s~gi~~   80 (447)
T PRK02472         72 MVKNPGIPY   80 (447)
T ss_pred             EEECCCCCC
Confidence            999988653

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.81  E-value=0.001  Score=58.12  Aligned_cols=121  Identities=16%  Similarity=0.128  Sum_probs=80.0

Q ss_pred             CCC-CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhcc---CCCeEEEEccCCChhhHHHHhc
Q 020924            1 MAL-EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKA---SENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      |.| +++||.|+|+ |.+|+.++..|+..|. +|+++++++.......++.....   +...++...  +|   . +.++
T Consensus         1 ~~~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~   73 (321)
T PTZ00082          1 MTMIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIA   73 (321)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhC
Confidence            555 3478999996 9999999999998895 89999988775433333222111   111222211  22   3 3568


Q ss_pred             CcceEEEecccCCCCCCCC---ccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccc
Q 020924           76 GCNGVFHIACPAPSTTVPN---PQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSG  128 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~  128 (319)
                      ++|+||.+++........+   +....+..|+.....+++.+.+.+.+ .+|.+|-.
T Consensus        74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP  130 (321)
T PTZ00082         74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNP  130 (321)
T ss_pred             CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            9999999998654322110   23567788999999999999888765 67776653

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.79  E-value=0.00032  Score=61.58  Aligned_cols=105  Identities=11%  Similarity=0.108  Sum_probs=68.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh-------------------hhH----HHHHhhhccCCCeE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD-------------------EKN----ARLYELEKASENLK   58 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~----~~~~~~~~~~~~~~   58 (319)
                      ++.++|+|.|+ |.+|+++++.|+..|. ++++++++.-+                   .+.    ..+.++. ..-.++
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in-p~v~i~   99 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN-SEVEIV   99 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC-CCcEEE
Confidence            35678999998 7899999999999997 78888876310                   011    1222221 122456


Q ss_pred             EEEccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccc
Q 020924           59 LFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG  128 (319)
Q Consensus        59 ~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~  128 (319)
                      .+..|++ .+.++++++++|+||.+...        . ..        -..+-+.|++.++ ++|+.+..
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D~--------~-~~--------r~~in~~~~~~~i-p~i~~~~~  150 (338)
T PRK12475        100 PVVTDVT-VEELEELVKEVDLIIDATDN--------F-DT--------RLLINDLSQKYNI-PWIYGGCV  150 (338)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEEcCCC--------H-HH--------HHHHHHHHHHcCC-CEEEEEec
Confidence            6666775 45678888999999998521        1 11        1235567777786 67776553

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.78  E-value=0.00037  Score=51.63  Aligned_cols=97  Identities=22%  Similarity=0.307  Sum_probs=55.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCC-hhhHHHHHhhhccCCCe-EEEEccCCChhhHHHHhcCcceEEEe
Q 020924            7 RVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPS-DEKNARLYELEKASENL-KLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ||.|+||||++|+.+++.|.++ .+++..+..+.. ...  .+.......... .....+ .+.+.    +.++|+||.|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~Dvvf~a   73 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGK--PLSEVFPHPKGFEDLSVED-ADPEE----LSDVDVVFLA   73 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTS--BHHHTTGGGTTTEEEBEEE-TSGHH----HTTESEEEE-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCC--eeehhccccccccceeEee-cchhH----hhcCCEEEec
Confidence            6999999999999999999885 356554444333 211  111111101111 221122 23332    3789999998


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      .+..                  ....+...+.+.|+ ++|=.|+..
T Consensus        74 ~~~~------------------~~~~~~~~~~~~g~-~ViD~s~~~  100 (121)
T PF01118_consen   74 LPHG------------------ASKELAPKLLKAGI-KVIDLSGDF  100 (121)
T ss_dssp             SCHH------------------HHHHHHHHHHHTTS-EEEESSSTT
T ss_pred             Cchh------------------HHHHHHHHHhhCCc-EEEeCCHHH
Confidence            6321                  13446667778888 888877754

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.75  E-value=0.00046  Score=60.10  Aligned_cols=173  Identities=16%  Similarity=0.127  Sum_probs=98.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCCh--hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSD--EKNARLYELEKASENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      .||.|+|++|++|++++-.|+..|.       ++..++++...  .....++-.......    ..+..-.....+.+++
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~----~~~~~i~~~~~~~~~d   79 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPL----LAGVVATTDPEEAFKD   79 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccc----cCCcEEecChHHHhCC
Confidence            5899999999999999999988773       78999886532  222232211111000    0011001233466789


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC-CE-EEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV-KR-VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~-iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                      +|+||..||...... .+ -.+.+..|+.....+...+.+++. +- ++.+|-..-+.       ....-+.++.-   |
T Consensus        80 aDvVVitAG~~~k~g-~t-R~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~-------t~v~~k~s~g~---p  147 (323)
T TIGR01759        80 VDAALLVGAFPRKPG-ME-RADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTN-------ALIASKNAPDI---P  147 (323)
T ss_pred             CCEEEEeCCCCCCCC-Cc-HHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHH-------HHHHHHHcCCC---C
Confidence            999999999753321 23 378899999999999999999865 44 44444211000       00000111000   0


Q ss_pred             ccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCC
Q 020924          155 RTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLL  196 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~  196 (319)
                        +....|.+.+-.-++-...+++.+++..-++-..|+|...
T Consensus       148 --~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG  187 (323)
T TIGR01759       148 --PKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHS  187 (323)
T ss_pred             --HHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCC
Confidence              0222333433333444445566677777776666777654

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.74  E-value=0.00013  Score=72.36  Aligned_cols=77  Identities=19%  Similarity=0.126  Sum_probs=58.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCe-------------EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR-DYF-------------VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS   69 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   69 (319)
                      ++++|+|.|+ |++|+..++.|.+. +++             |.+.+++...  ...+.+.   .++++.+..|++|.++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~--a~~la~~---~~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKD--AKETVEG---IENAEAVQLDVSDSES  641 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHH--HHHHHHh---cCCCceEEeecCCHHH
Confidence            4689999998 99999999999875 333             7766666543  2222211   2367889999999999


Q ss_pred             HHHHhcCcceEEEeccc
Q 020924           70 VKSAIVGCNGVFHIACP   86 (319)
Q Consensus        70 ~~~~~~~~d~vi~~a~~   86 (319)
                      +.++++++|+||.+...
T Consensus       642 L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHHhhcCCCEEEECCCc
Confidence            99999999999998754

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.73  E-value=0.00035  Score=60.40  Aligned_cols=115  Identities=17%  Similarity=0.090  Sum_probs=77.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      |||.|+|++|.+|++++-.|+..|  .++.+++++  ......++ +.+..........  ...+++.+.++++|+||-.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alD-L~~~~~~~~i~~~--~~~~~~y~~~~daDivvit   75 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAAD-LSHINTPAKVTGY--LGPEELKKALKGADVVVIP   75 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehH-hHhCCCcceEEEe--cCCCchHHhcCCCCEEEEe
Confidence            489999999999999999998887  578888887  22222222 1111111122111  0122356778899999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ||...... ... .+.++.|......+.+...+++.+ .+|.+|-
T Consensus        76 aG~~~k~g-~tR-~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          76 AGVPRKPG-MTR-DDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             CCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            99753321 233 788999999999999999988654 4555554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.72  E-value=0.00056  Score=59.68  Aligned_cols=171  Identities=17%  Similarity=0.138  Sum_probs=96.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCCh--hhHHHH--Hhhh-ccCCCeEEEEccCCChhhHHH
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSD--EKNARL--YELE-KASENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~--~~~~-~~~~~~~~~~~Dl~~~~~~~~   72 (319)
                      .+||.|+|++|.+|+.++-.|+..|.       ++..+++++..  .....+  .... .....++     ++  ....+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~--~~~y~   76 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----IT--DDPNV   76 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Ee--cChHH
Confidence            46899999999999999999987663       78888885432  111121  1111 0001111     11  13345


Q ss_pred             HhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           73 AIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        73 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      .++++|+||-.||...... .+ -.+.+..|+...+.+.+...++. .+ .+|.+|-..-+..       ...-+.++.-
T Consensus        77 ~~~daDiVVitaG~~~k~g-~t-R~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t-------~v~~k~s~g~  147 (326)
T PRK05442         77 AFKDADVALLVGARPRGPG-ME-RKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNA-------LIAMKNAPDL  147 (326)
T ss_pred             HhCCCCEEEEeCCCCCCCC-Cc-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHH-------HHHHHHcCCC
Confidence            6789999999998643321 23 37889999999999999999854 33 5565553210000       0000001000


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCC
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLL  196 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~  196 (319)
                      |     +....|.+-+-.-++-...+++.+++..-++...|+|...
T Consensus       148 p-----~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG  188 (326)
T PRK05442        148 P-----AENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS  188 (326)
T ss_pred             C-----HHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence            0     0222333333333444445666677766666656677643

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.71  E-value=0.00012  Score=64.24  Aligned_cols=94  Identities=21%  Similarity=0.190  Sum_probs=60.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCe---EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYF---VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |++|+|.||||++|+.+++.|.++||.   +.++.+.........   +    .+......|+.+.     .++++|+||
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~---~----~g~~i~v~d~~~~-----~~~~vDvVf   68 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS---F----KGKELKVEDLTTF-----DFSGVDIAL   68 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee---e----CCceeEEeeCCHH-----HHcCCCEEE
Confidence            468999999999999999999998764   477776644322111   1    1123334455431     236899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      .+++...                  +..+.....+.|+ ++|=+||..
T Consensus        69 ~A~g~g~------------------s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         69 FSAGGSV------------------SKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             ECCChHH------------------HHHHHHHHHhCCC-EEEECCchh
Confidence            8764311                  2335555666777 788788754

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.69  E-value=0.0015  Score=56.57  Aligned_cols=113  Identities=15%  Similarity=0.151  Sum_probs=76.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhcc--C--CCeEEEEccCCChhhHHHHhcCcceE
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKA--S--ENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~--~--~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ||.|.|+ |.+|+.++-.|+.+|.  ++.+++.+.+......++-....  .  ..++...+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5899998 9999999999988873  79999987665444333322111  1  133443332       3467899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |-.||..........-.+.+..|+.....+...+.+++..-++.+-|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99999753322111026788999999999999999987655444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.69  E-value=0.00056  Score=60.09  Aligned_cols=107  Identities=16%  Similarity=0.165  Sum_probs=70.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh-------------------hhHHH-HHhhhccCC--CeEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD-------------------EKNAR-LYELEKASE--NLKL   59 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~-~~~~~~~~~--~~~~   59 (319)
                      ++.++|+|.|+ |.+|++++..|+..|. ++++++++.-+                   .+... .+.+....+  .++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            34678999998 9999999999999997 88888875310                   01111 112211123  3555


Q ss_pred             EEccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           60 FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        60 ~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      +..+++ .+.+.+++++.|+||.+..         .        ...-..+.++|++.++ ++|+.|+..
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D---------n--------~~~r~~ln~~~~~~~i-P~i~~~~~g  151 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATD---------N--------FETRFIVNDAAQKYGI-PWIYGACVG  151 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCC---------C--------HHHHHHHHHHHHHhCC-CEEEEeeee
Confidence            666664 4556777889999999842         1        1122347788888886 788877643

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.67  E-value=0.00065  Score=58.85  Aligned_cols=114  Identities=18%  Similarity=0.122  Sum_probs=76.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      ||.|+|++|.+|++++-.|+.++.  ++.++++++.....+-+..   ...........  +.+++.+.++++|+||-.|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~---~~~~~~i~~~~--~~~~~~~~~~daDivvita   75 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSH---IPTAASVKGFS--GEEGLENALKGADVVVIPA   75 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhc---CCcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence            589999999999999999988774  7888888763222222221   11111221101  1123567889999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |...... .+. .+.+..|+...+.+.+...+++.+ .+|.+|-
T Consensus        76 G~~~~~g-~~R-~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        76 GVPRKPG-MTR-DDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCCCCC-ccH-HHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            9753321 233 678999999999999999988655 4555544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.66  E-value=0.00054  Score=59.80  Aligned_cols=117  Identities=17%  Similarity=0.093  Sum_probs=77.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.++|.|+|| |.+|+.++..|+..| .++.+++++.+......++..... ..+..   ..+....+.+ .++++|+||
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~---~~i~~~~d~~-~l~~ADiVV   78 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSN---INILGTNNYE-DIKDSDVVV   78 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCC---eEEEeCCCHH-HhCCCCEEE
Confidence            5679999998 999999999998888 789999987654333332211110 00100   0111112344 668999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCE-EEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR-VIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~-iv~~SS  127 (319)
                      .+++...... .. ..+.+..|......+.+.+.+.+.+. +|++|-
T Consensus        79 itag~~~~~g-~~-r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         79 ITAGVQRKEE-MT-REDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             ECCCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9998643321 22 26788899999999999998886554 666654

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.62  E-value=0.00022  Score=62.90  Aligned_cols=101  Identities=23%  Similarity=0.313  Sum_probs=61.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEE-EccCCChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLF-KADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |++|+|+||||++|+.+++.|.++ ++++.++.++.....  .+.+.   .+.+..+ ..++.+.+..  ..+++|+|+-
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~--~l~~~---~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~   74 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGK--PLSDV---HPHLRGLVDLVLEPLDPE--ILAGADVVFL   74 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCc--chHHh---CcccccccCceeecCCHH--HhcCCCEEEE
Confidence            479999999999999999999876 688877776433211  11111   1111111 1123333322  4467999988


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAV  131 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~  131 (319)
                      |....                  ....+...+.++|+ ++|=.|+...+
T Consensus        75 alP~~------------------~~~~~v~~a~~aG~-~VID~S~~fR~  104 (343)
T PRK00436         75 ALPHG------------------VSMDLAPQLLEAGV-KVIDLSADFRL  104 (343)
T ss_pred             CCCcH------------------HHHHHHHHHHhCCC-EEEECCcccCC
Confidence            75321                  12346666666775 89999986644

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.61  E-value=0.00021  Score=62.51  Aligned_cols=99  Identities=20%  Similarity=0.228  Sum_probs=59.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCe---EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYF---VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |+ +|++|+|+||||++|+.+++.|.+++|.   +..+.......+.  +. +    .+   ...++.+.+.. + ++++
T Consensus         1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~--l~-~----~~---~~l~~~~~~~~-~-~~~v   67 (336)
T PRK05671          1 MS-QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHS--VP-F----AG---KNLRVREVDSF-D-FSQV   67 (336)
T ss_pred             CC-CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCe--ec-c----CC---cceEEeeCChH-H-hcCC
Confidence            66 4479999999999999999999977654   3333322221110  00 0    11   11233332222 2 4789


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAV  131 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~  131 (319)
                      |++|-+++. .         .        +..++..+.+.|+ ++|=.||....
T Consensus        68 D~vFla~p~-~---------~--------s~~~v~~~~~~G~-~VIDlS~~fR~  102 (336)
T PRK05671         68 QLAFFAAGA-A---------V--------SRSFAEKARAAGC-SVIDLSGALPS  102 (336)
T ss_pred             CEEEEcCCH-H---------H--------HHHHHHHHHHCCC-eEEECchhhcC
Confidence            999987641 0         0        2336777777887 78888887643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.60  E-value=0.00028  Score=64.97  Aligned_cols=72  Identities=13%  Similarity=0.133  Sum_probs=58.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++..  ...+.+    ..+++++.+|.++...++.+ ++++|.||-+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~--~~~~~~----~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER--LRRLQD----RLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH--HHHHHh----hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            47999998 999999999999999999999987653  222221    13578899999999999888 78899888865

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.58  E-value=0.0016  Score=55.98  Aligned_cols=114  Identities=19%  Similarity=0.136  Sum_probs=75.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHH--hhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLY--ELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +||.|+|+ |+||+.++-.|+.++  .++.+++++........++  ........-..+.+| .+    .+.++++|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            47999999 999999999998765  4899999985443322222  111111111112222 11    44567899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      -.||...-+. .+. .+.++.|......+.....+.+.+-+|.+-|
T Consensus        75 itAG~prKpG-mtR-~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          75 ITAGVPRKPG-MTR-LDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EeCCCCCCCC-CCH-HHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            9998654433 233 6889999999999999999887765555444

>PLN02602 lactate dehydrogenase

Probab=97.55  E-value=0.0032  Score=55.50  Aligned_cols=112  Identities=15%  Similarity=0.152  Sum_probs=74.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhh--hccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYEL--EKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +||.|+|+ |.+|+.++-.|+..|  .++.+++++........++-.  .......++.. + .+   . +.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~-~d---y-~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-S-TD---Y-AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-C-CC---H-HHhCCCCEEE
Confidence            69999996 999999999998877  478999987764433333211  11111222221 1 12   2 2378999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      -.||...... .+. .+.+..|+.....+.+.+.+++.+ .+|.+|
T Consensus       111 itAG~~~k~g-~tR-~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPG-ESR-LNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcC-CCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999753321 233 678899999999999999988654 455554

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.54  E-value=0.0015  Score=53.13  Aligned_cols=105  Identities=16%  Similarity=0.134  Sum_probs=66.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHH-HHHhhhccCCCe--EEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNA-RLYELEKASENL--KLFK   61 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~~~--~~~~   61 (319)
                      ++.++|+|.|+ |.+|+++++.|+..|. ++++++++.-+.                 +.. ..+.+....+.+  +.+.
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            35678999986 9999999999999996 788888762110                 111 111222222333  3333


Q ss_pred             ccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           62 ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ..+ +.+.+.+.++++|+||.+...        . .        .-..+-+.|++.++ .+|+.++
T Consensus        98 ~~i-~~~~~~~~~~~~D~Vi~~~d~--------~-~--------~r~~l~~~~~~~~i-p~i~~~~  144 (202)
T TIGR02356        98 ERV-TAENLELLINNVDLVLDCTDN--------F-A--------TRYLINDACVALGT-PLISAAV  144 (202)
T ss_pred             hcC-CHHHHHHHHhCCCEEEECCCC--------H-H--------HHHHHHHHHHHcCC-CEEEEEe
Confidence            344 345677788899999997521        1 1        12346678888886 6888665

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.53  E-value=0.00071  Score=59.90  Aligned_cols=37  Identities=27%  Similarity=0.377  Sum_probs=30.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREP   39 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~   39 (319)
                      |++++|+|+||||++|+++++.|.++. .++.++.++.
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            345799999999999999999998765 4888875554

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.50  E-value=0.0015  Score=56.95  Aligned_cols=117  Identities=18%  Similarity=0.173  Sum_probs=73.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      |+||.|+|+ |.+|+.++..|+..|. +|++++++++......++ +..... .......++...+. +.++++|+||.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~d-l~~~~~-~~~~~~~i~~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALD-IAEAAP-VEGFDTKITGTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHH-HHhhhh-hcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence            479999999 9999999999998875 999999977644332221 111000 00000111111123 346899999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ++......  ....+.+..|+.....+++.+.+...+ .+|.+|-
T Consensus        78 ~~~p~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         78 AGVPRKPG--MSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCCCCCcC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            87543221  122466778999999999998887554 4666554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.49  E-value=0.00098  Score=61.40  Aligned_cols=101  Identities=21%  Similarity=0.290  Sum_probs=70.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~   82 (319)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|++++++++..  ..+.+   ...++.++.+|.++.+.++++ ++++|.||-
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~--~~~~~---~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERA--EELAE---ELPNTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH--HHHHH---HCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            3578999999 9999999999999999999999876532  22221   124678899999999888654 467898875


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +..        +.     +.|..    ....+++.+.+++|...+
T Consensus       304 ~~~--------~~-----~~n~~----~~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        304 LTN--------DD-----EANIL----SSLLAKRLGAKKVIALVN  331 (453)
T ss_pred             CCC--------Cc-----HHHHH----HHHHHHHhCCCeEEEEEC
Confidence            432        11     23443    233455667767666554

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.47  E-value=0.0017  Score=59.72  Aligned_cols=79  Identities=15%  Similarity=0.131  Sum_probs=55.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++++++|+|+|+ |..|..+++.|.++|++|.+.+.+........++.   ...++.++.+...     ...+.++|.|
T Consensus         1 ~~~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~---~~~gi~~~~g~~~-----~~~~~~~d~v   71 (445)
T PRK04308          1 MTFQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK---MFDGLVFYTGRLK-----DALDNGFDIL   71 (445)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh---ccCCcEEEeCCCC-----HHHHhCCCEE
Confidence            8888899999998 68999999999999999999987655321112221   1125666554422     1234678999


Q ss_pred             EEecccCC
Q 020924           81 FHIACPAP   88 (319)
Q Consensus        81 i~~a~~~~   88 (319)
                      |...|...
T Consensus        72 v~spgi~~   79 (445)
T PRK04308         72 ALSPGISE   79 (445)
T ss_pred             EECCCCCC
Confidence            99888653

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.47  E-value=0.00054  Score=53.68  Aligned_cols=57  Identities=19%  Similarity=0.205  Sum_probs=46.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++|+|+|+++.+|..+++.|.++|.+|+++.|+.                            +++.+.+.++|+||
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------------~~l~~~l~~aDiVI   92 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------------KNLKEHTKQADIVI   92 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------------hhHHHHHhhCCEEE
Confidence            46789999999977889999999999999999888753                            23556777889999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+.+.
T Consensus        93 sat~~   97 (168)
T cd01080          93 VAVGK   97 (168)
T ss_pred             EcCCC
Confidence            87764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.46  E-value=0.0032  Score=56.93  Aligned_cols=113  Identities=18%  Similarity=0.126  Sum_probs=77.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-------CC--eEEEEEcCCChhhHHHHHhhhcc---CCCeEEEEccCCChhhHHHH
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-------DY--FVHGTAREPSDEKNARLYELEKA---SENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      -+|.|+|++|.+|++++-.|+..       |.  +++.++++.+......++-....   ...+.+. .  .+    .+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~----ye~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DP----YEV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CC----HHH
Confidence            47999999999999999999887       64  78888888776544444322211   1112111 1  12    356


Q ss_pred             hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHh-CCCC-EEEEecc
Q 020924           74 IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AKVK-RVIVVSS  127 (319)
Q Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~-~~~~-~iv~~SS  127 (319)
                      ++++|+||-.||...... .+. .+.++.|+.....+.....+ ++.. .+|.+|-
T Consensus       174 ~kdaDiVVitAG~prkpG-~tR-~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        174 FQDAEWALLIGAKPRGPG-MER-ADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             hCcCCEEEECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            789999999999753322 233 67899999999999999999 5544 5555553

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.46  E-value=0.0044  Score=53.89  Aligned_cols=110  Identities=16%  Similarity=0.198  Sum_probs=72.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHH--HhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARL--YELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |+|.|.|+ |.+|+.++..|+.+|  .+|.+++++.........  ..............   .+   . +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d---~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GD---Y-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CC---H-HHhCCCCEEE
Confidence            47999998 999999999999999  689999998754322222  21111111222221   12   2 3478999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEe
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV  125 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~  125 (319)
                      -+++.....  ..........|+.....+.+.+.+.+.+-++.+
T Consensus        73 ita~~~~~~--~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv  114 (308)
T cd05292          73 ITAGANQKP--GETRLDLLKRNVAIFKEIIPQILKYAPDAILLV  114 (308)
T ss_pred             EccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            999864332  122356788899999999999988765433333

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.41  E-value=0.0016  Score=55.29  Aligned_cols=112  Identities=17%  Similarity=0.079  Sum_probs=75.2

Q ss_pred             EEEeCcchHHHHHHHHHHHHCC----CeEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            8 VCVTGAGGFLASWVVKLLLSRD----YFVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |.|+||+|.+|..++..|+..|    .+|.+++++++......  ++......     ....++-..++.+.++++|+||
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-----~~~~i~~~~d~~~~~~~aDiVv   75 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-----ADIKVSITDDPYEAFKDADVVI   75 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-----cCcEEEECCchHHHhCCCCEEE
Confidence            5799999999999999999888    78999998775432222  22221110     0112221234567789999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      -.++....... .. ......|+.....+.+.+.+.+.+ .+|.+|
T Consensus        76 ~t~~~~~~~g~-~r-~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          76 ITAGVGRKPGM-GR-LDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             ECCCCCCCcCC-CH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99986544321 22 567888999999999999988654 444543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.41  E-value=0.00061  Score=52.83  Aligned_cols=76  Identities=17%  Similarity=0.069  Sum_probs=50.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +++++|+|+|+ |.+|+.+++.|.+.| ++|++.+|+.+... ...+.+.     ...+..+..+   ..++++++|+||
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~-~~~~~~~-----~~~~~~~~~~---~~~~~~~~Dvvi   86 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAK-ALAERFG-----ELGIAIAYLD---LEELLAEADLII   86 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHH-HHHHHHh-----hcccceeecc---hhhccccCCEEE
Confidence            45689999998 999999999999986 88999998765321 1112211     1111123333   334478899999


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      ++.....
T Consensus        87 ~~~~~~~   93 (155)
T cd01065          87 NTTPVGM   93 (155)
T ss_pred             eCcCCCC
Confidence            9986544

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.40  E-value=0.001  Score=58.82  Aligned_cols=102  Identities=20%  Similarity=0.226  Sum_probs=60.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCeEEEE-EcCCChhhHHHHHhhhccCCCeEEE-EccCCChhhHHHHhcCcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DYFVHGT-AREPSDEKNARLYELEKASENLKLF-KADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      ++|.|.||||++|+.+++.|.++ ++++..+ +++....+.  +...   .+.+... ..++.+ .+.+++.+++|+||-
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~--~~~~---~~~l~~~~~~~~~~-~~~~~~~~~~DvVf~   74 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKP--VSEV---HPHLRGLVDLNLEP-IDEEEIAEDADVVFL   74 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCC--hHHh---CccccccCCceeec-CCHHHhhcCCCEEEE
Confidence            47999999999999999999976 6788744 433321111  1110   1111111 111221 123344457999998


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVG  132 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~  132 (319)
                      |....                  ....++..+.+.|+ ++|=+||....-
T Consensus        75 alP~~------------------~s~~~~~~~~~~G~-~VIDlS~~fR~~  105 (346)
T TIGR01850        75 ALPHG------------------VSAELAPELLAAGV-KVIDLSADFRLK  105 (346)
T ss_pred             CCCch------------------HHHHHHHHHHhCCC-EEEeCChhhhcC
Confidence            76321                  13456667767774 899999876543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.40  E-value=0.0013  Score=48.27  Aligned_cols=69  Identities=22%  Similarity=0.270  Sum_probs=52.5

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      |+|.|. |-+|+.+++.|.+.+++|+++++++...  ..+.+     .++.++.+|.++.+.++++ +++++.++-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~--~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERV--EELRE-----EGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHH--HHHHH-----TTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHH--HHHHh-----cccccccccchhhhHHhhcCccccCEEEEcc
Confidence            678888 7899999999999777999999876532  22221     3578999999999999886 45788888765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.37  E-value=0.00075  Score=54.03  Aligned_cols=67  Identities=13%  Similarity=-0.064  Sum_probs=45.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |++.| ||+|.||+.++++|.+.||+|++.+|+.++......+.+.   +.        -...+..++.+.+|+||-..
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~---~~--------i~~~~~~dA~~~aDVVvLAV   68 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG---PL--------ITGGSNEDAAALADVVVLAV   68 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc---cc--------cccCChHHHHhcCCEEEEec
Confidence            44554 5679999999999999999999998876654332222221   11        12234566777889998754

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.37  E-value=0.0016  Score=55.32  Aligned_cols=100  Identities=15%  Similarity=0.158  Sum_probs=68.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .++++.|+|+.| +|+--++.-...|++|+++++...+ +.+.++.+     +.+.+..-..|++.++++.+..|.++|.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~k-keea~~~L-----GAd~fv~~~~d~d~~~~~~~~~dg~~~~  253 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKK-KEEAIKSL-----GADVFVDSTEDPDIMKAIMKTTDGGIDT  253 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchh-HHHHHHhc-----CcceeEEecCCHHHHHHHHHhhcCccee
Confidence            478999999988 9988887777889999999998643 33444433     4555543333788888888777888887


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +....    ..+           ...++..++..|  ++|+++=
T Consensus       254 v~~~a----~~~-----------~~~~~~~lk~~G--t~V~vg~  280 (360)
T KOG0023|consen  254 VSNLA----EHA-----------LEPLLGLLKVNG--TLVLVGL  280 (360)
T ss_pred             eeecc----ccc-----------hHHHHHHhhcCC--EEEEEeC
Confidence            75331    122           112566666555  7888865

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.35  E-value=0.0014  Score=54.06  Aligned_cols=36  Identities=14%  Similarity=0.067  Sum_probs=32.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |+|.|+||+|.+|+.++..|++.|++|.+.+|+++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            479999999999999999999999999999987654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.35  E-value=0.00072  Score=58.87  Aligned_cols=34  Identities=15%  Similarity=0.182  Sum_probs=31.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ++|.|+| +|.+|+.++..|+++|++|++.+|++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            5899998 599999999999999999999999865

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.34  E-value=0.0066  Score=52.80  Aligned_cols=114  Identities=14%  Similarity=0.090  Sum_probs=75.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      .+||.|+|+ |.+|+.++-.|+..|  -++.+++++........++-...  ......+...  .|   .+ .++++|+|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~-~~~~adiv   75 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YS-VTANSKVV   75 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC---HH-HhCCCCEE
Confidence            358999997 999999999998776  57899998776443333222111  1111122221  12   23 37899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |-+||...... .+. ...++.|....+.+.+.+.+++.+ .+|.+|-
T Consensus        76 vitaG~~~k~g-~~R-~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          76 IVTAGARQNEG-ESR-LDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             EECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            99998654321 233 678899999999999999998654 4555553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.33  E-value=0.00086  Score=57.44  Aligned_cols=75  Identities=19%  Similarity=0.194  Sum_probs=50.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHH-hhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLY-ELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ..+++++|+|+ |.+|++++..|...| .+|++++|+.++.  ..+. .+... ..+.+   ++    +....+.++|+|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a--~~l~~~~~~~-~~~~~---~~----~~~~~~~~~Div  189 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA--EELAKLFGAL-GKAEL---DL----ELQEELADFDLI  189 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH--HHHHHHhhhc-cceee---cc----cchhccccCCEE
Confidence            45789999997 999999999999999 7999999986533  2222 21110 00111   11    233456789999


Q ss_pred             EEecccCC
Q 020924           81 FHIACPAP   88 (319)
Q Consensus        81 i~~a~~~~   88 (319)
                      |++.....
T Consensus       190 InaTp~g~  197 (278)
T PRK00258        190 INATSAGM  197 (278)
T ss_pred             EECCcCCC
Confidence            99876543

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.31  E-value=0.00088  Score=60.51  Aligned_cols=171  Identities=14%  Similarity=0.075  Sum_probs=97.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC---C----CeEEEEEcC--CChhhHHHHHhhhcc----CCCeEEEEccCCChhhHHH
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR---D----YFVHGTARE--PSDEKNARLYELEKA----SENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~---g----~~V~~~~r~--~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~   72 (319)
                      -+|+||||+|.||.+|+-.+++-   |    ..+..++..  ........+ ++.+.    ...+.+. .      ...+
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~am-DL~D~a~pll~~v~i~-~------~~~e  195 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVM-EVEDLAFPLLRGISVT-T------DLDV  195 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHH-HHHHhHHhhcCCcEEE-E------CCHH
Confidence            47999999999999999999762   3    235555553  222122222 22211    1122222 1      2246


Q ss_pred             HhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           73 AIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        73 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      .++++|+||-.||...... .+. .+.++.|+........+..++..  .+++.+.|--+ .-.     ....-..+|.-
T Consensus       196 a~~daDvvIitag~prk~G-~~R-~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPv-D~~-----t~i~~k~apgi  267 (452)
T cd05295         196 AFKDAHVIVLLDDFLIKEG-EDL-EGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFL-NLK-----TSILIKYAPSI  267 (452)
T ss_pred             HhCCCCEEEECCCCCCCcC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcH-HHH-----HHHHHHHcCCC
Confidence            7889999999998653322 233 67899999999999999998865  56776665111 000     00000011000


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCC
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQ  197 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~  197 (319)
                         |  +...-|.+....-++....+++.+++..-|+-..|.|....
T Consensus       268 ---P--~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         268 ---P--RKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             ---C--HHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence               0  12334444444444445556666777777766677776544

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=97.31  E-value=0.0059  Score=45.58  Aligned_cols=96  Identities=17%  Similarity=0.177  Sum_probs=67.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +++++++.|. | -|.+++..|.+.|++|++++.++....  ...+     ..+.++..|+.+++  .++.+++|.|+-+
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~--~a~~-----~~~~~v~dDlf~p~--~~~y~~a~liysi   84 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVE--KAKK-----LGLNAFVDDLFNPN--LEIYKNAKLIYSI   84 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHH--HHHH-----hCCeEEECcCCCCC--HHHHhcCCEEEEe
Confidence            3578999987 5 888999999999999999998877432  1111     35789999999765  2345677888775


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      =         -| .++       ...+++.|++.++.-+|..=|
T Consensus        85 r---------pp-~el-------~~~~~~la~~~~~~~~i~~l~  111 (134)
T PRK04148         85 R---------PP-RDL-------QPFILELAKKINVPLIIKPLS  111 (134)
T ss_pred             C---------CC-HHH-------HHHHHHHHHHcCCCEEEEcCC
Confidence            2         11 121       345888999988876665443

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.31  E-value=0.002  Score=47.91  Aligned_cols=94  Identities=18%  Similarity=0.293  Sum_probs=55.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-CCCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLS-RDYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++|+|.|++|-+|+.+++.+.+ .|+++.+.. |+.++......-++.+    ..  ...+.-.++++++++.+|++|++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~----~~--~~~~~v~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAG----IG--PLGVPVTDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCT----SS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhC----cC--CcccccchhHHHhcccCCEEEEc
Confidence            4899999999999999999998 788866554 4442111100101100    00  01122235678888889999998


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEE
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV  124 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~  124 (319)
                      ..         | .        .+...++.|.++++ ++|.
T Consensus        75 T~---------p-~--------~~~~~~~~~~~~g~-~~Vi   96 (124)
T PF01113_consen   75 TN---------P-D--------AVYDNLEYALKHGV-PLVI   96 (124)
T ss_dssp             S----------H-H--------HHHHHHHHHHHHT--EEEE
T ss_pred             CC---------h-H--------HhHHHHHHHHhCCC-CEEE
Confidence            62         2 1        24457788888876 5554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.30  E-value=0.0012  Score=64.87  Aligned_cols=164  Identities=15%  Similarity=0.165  Sum_probs=105.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcC------
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVG------   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   76 (319)
                      |..+|+||-|..|..|+..|.++|.+ +...+|+--+.....  +......+-.+.+-..|++..+....++++      
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~ 1848 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGP 1848 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhccc
Confidence            67999999999999999999999976 444556543322111  111111122333344677777777766653      


Q ss_pred             cceEEEecccCCCCCCCCc----cchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           77 CNGVFHIACPAPSTTVPNP----QMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~----~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +-.|+|+|++....-.++.    ..+.-+--+.+|++|=...|+..  .+-||.+||.+.-.++.+              
T Consensus      1849 vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G-------------- 1914 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG-------------- 1914 (2376)
T ss_pred             ccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc--------------
Confidence            4788999886433211111    12223334667888888888774  468999999865445543              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLV  191 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v  191 (319)
                             .+-||.+..+.|+++.+-. ++|++-+.+.-|.|
T Consensus      1915 -------QtNYG~aNS~MERiceqRr-~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1915 -------QTNYGLANSAMERICEQRR-HEGFPGTAIQWGAI 1947 (2376)
T ss_pred             -------ccccchhhHHHHHHHHHhh-hcCCCcceeeeecc
Confidence                   3449999999999988754 35777776665543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.30  E-value=0.00095  Score=57.28  Aligned_cols=69  Identities=19%  Similarity=0.176  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++++|+|. |.+|+.+++.|...|.+|++.+|+....  .....     .+...     .+.+++.+.++++|+||+
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~--~~~~~-----~g~~~-----~~~~~l~~~l~~aDiVin  215 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL--ARITE-----MGLIP-----FPLNKLEEKVAEIDIVIN  215 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHH-----CCCee-----ecHHHHHHHhccCCEEEE
Confidence            56789999998 8899999999999999999999976532  11111     12222     134567778889999999


Q ss_pred             ec
Q 020924           83 IA   84 (319)
Q Consensus        83 ~a   84 (319)
                      +.
T Consensus       216 t~  217 (287)
T TIGR02853       216 TI  217 (287)
T ss_pred             CC
Confidence            75

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.30  E-value=0.001  Score=56.29  Aligned_cols=68  Identities=12%  Similarity=0.153  Sum_probs=45.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +++|+|+|++|.+|+.+++.+.+ .+.++.++......... .          .  -..++...+++.++++++|+||++
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~-~----------~--~~~~i~~~~dl~~ll~~~DvVid~   67 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLV-G----------Q--GALGVAITDDLEAVLADADVLIDF   67 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccc-c----------c--CCCCccccCCHHHhccCCCEEEEC
Confidence            36899999999999999998876 46887775543321110 0          0  112333445566677789999998


Q ss_pred             cc
Q 020924           84 AC   85 (319)
Q Consensus        84 a~   85 (319)
                      +.
T Consensus        68 t~   69 (257)
T PRK00048         68 TT   69 (257)
T ss_pred             CC
Confidence            73

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.28  E-value=0.0034  Score=47.47  Aligned_cols=104  Identities=16%  Similarity=0.188  Sum_probs=66.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHHHH-HhhhccCC--CeEEEEcc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNARL-YELEKASE--NLKLFKAD   63 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~~-~~~~~~~~--~~~~~~~D   63 (319)
                      .++|+|.|+ |.+|+.+++.|+..|. ++++++...-..                 +...+ +.+....+  +++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468999988 9999999999999996 688877541110                 11111 11111123  45566666


Q ss_pred             CCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccc
Q 020924           64 LLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG  128 (319)
Q Consensus        64 l~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~  128 (319)
                      + +.+...+.++++|+||.+...                 ......+.+.|++.+. ++|+.++.
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~~  126 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGVN  126 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred             c-ccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEee
Confidence            6 556778888899999998521                 1123347778888887 78887763

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.27  E-value=0.004  Score=54.04  Aligned_cols=116  Identities=16%  Similarity=0.116  Sum_probs=73.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |+|.|.|+ |.+|..++..|+.+|+ +|+++++.........++......  .......++-..++++ ++++|+||-++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~--~~~~~~~i~~t~d~~~-~~~aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASP--VGGFDTKVTGTNNYAD-TANSDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhh--ccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence            57999997 9999999999999886 899999866543323221111000  0000011111122333 57899999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      +.....  ...-.+.+..|......+++.+.+++.+ .+|.+|-
T Consensus        78 g~p~~~--~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        78 GLPRKP--GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            864332  1122567889999999999999887543 4666554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.24  E-value=0.0013  Score=56.15  Aligned_cols=56  Identities=13%  Similarity=0.130  Sum_probs=45.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++|+|+|.|++|.+|+.++..|+++|..|++..|+..                            .+.+.++++|+||
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~----------------------------~L~~~~~~aDIvI  207 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ----------------------------NLPELVKQADIIV  207 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch----------------------------hHHHHhccCCEEE
Confidence            357899999999999999999999999999998876321                            2344457889999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      ++.|
T Consensus       208 ~AtG  211 (283)
T PRK14192        208 GAVG  211 (283)
T ss_pred             EccC
Confidence            9886

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.21  E-value=0.0055  Score=50.12  Aligned_cols=108  Identities=18%  Similarity=0.183  Sum_probs=65.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh---h-------------hHHH-HHhhhccCC--CeEEEEc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD---E-------------KNAR-LYELEKASE--NLKLFKA   62 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~-------------~~~~-~~~~~~~~~--~~~~~~~   62 (319)
                      ++..+|+|.|+ |.+|+.+++.|+..|. ++++++.+.-+   .             +... .+.+....+  .++.+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            34578999987 9999999999999996 48887765210   0             1111 111111123  3444444


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVA  130 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~  130 (319)
                      .+++ +.+.+.++++|+||.+..        +. .        ....+.+.|++. ++ .+|+.+....
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D--------~~-~--------~r~~l~~~~~~~~~~-p~I~~~~~~~  154 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFD--------NA-E--------TKAMLVETVLEHPGK-KLVAASGMAG  154 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCC--------CH-H--------HHHHHHHHHHHhCCC-CEEEeehhhc
Confidence            4543 456677889999999741        11 1        123466777777 65 7887655433

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.21  E-value=0.0055  Score=49.60  Aligned_cols=110  Identities=16%  Similarity=0.173  Sum_probs=66.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-------------------hHH-HHHhhhccCCC--eEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-------------------KNA-RLYELEKASEN--LKLF   60 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~~-~~~~~~~~~~~--~~~~   60 (319)
                      +..+|+|.|++| +|+++++.|+..|. ++++++.+.-..                   +.. ..+.++...+.  ++.+
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~   96 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV   96 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            457899999855 99999999999994 577777542110                   000 01112222233  4444


Q ss_pred             EccCCC-hhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccccc
Q 020924           61 KADLLD-YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGL  133 (319)
Q Consensus        61 ~~Dl~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~  133 (319)
                      ..++.+ .+...+.++++|+||.+..         +        ......+-+.|++.++ ++|+.++ .+.++
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d---------~--------~~~~~~ln~~c~~~~i-p~i~~~~-~G~~G  151 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEE---------N--------YERTAKVNDVCRKHHI-PFISCAT-YGLIG  151 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEe-ecCEE
Confidence            445542 4456667788999997631         1        1112346688888887 7888776 44443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.18  E-value=0.0029  Score=51.32  Aligned_cols=72  Identities=21%  Similarity=0.235  Sum_probs=48.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++|+|.|| |-+|...++.|++.|++|+++++...+.    +..+.. ...+.+..-++.     ...+.++|.||
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~----l~~l~~-~~~i~~~~~~~~-----~~~l~~adlVi   75 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTEN----LVKLVE-EGKIRWKQKEFE-----PSDIVDAFLVI   75 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHH----HHHHHh-CCCEEEEecCCC-----hhhcCCceEEE
Confidence            568899999999 9999999999999999999998654332    111111 124555443332     22356778777


Q ss_pred             Eec
Q 020924           82 HIA   84 (319)
Q Consensus        82 ~~a   84 (319)
                      -+.
T Consensus        76 aaT   78 (202)
T PRK06718         76 AAT   78 (202)
T ss_pred             EcC
Confidence            653

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.18  E-value=0.0014  Score=57.65  Aligned_cols=92  Identities=16%  Similarity=0.171  Sum_probs=57.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEE---EEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVH---GTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +|+|.||||++|+.+++.|.+++|.+.   .+.+.....+...   +    .+......|+.     ...++++|++|-+
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~---~----~~~~~~~~~~~-----~~~~~~~D~v~~a   68 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT---F----KGKELEVNEAK-----IESFEGIDIALFS   68 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee---e----CCeeEEEEeCC-----hHHhcCCCEEEEC
Confidence            589999999999999999999887743   3345433221111   0    12344445553     1234789999998


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      ++...                  +..++..+.+.|+ ++|=.||..
T Consensus        69 ~g~~~------------------s~~~a~~~~~~G~-~VID~ss~~   95 (339)
T TIGR01296        69 AGGSV------------------SKEFAPKAAKCGA-IVIDNTSAF   95 (339)
T ss_pred             CCHHH------------------HHHHHHHHHHCCC-EEEECCHHH
Confidence            75321                  2335555566777 677777754

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.18  E-value=0.0035  Score=52.04  Aligned_cols=104  Identities=17%  Similarity=0.190  Sum_probs=64.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh-----------------hhHH-HHHhhhccCC--CeEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD-----------------EKNA-RLYELEKASE--NLKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------------~~~~-~~~~~~~~~~--~~~~~~~   62 (319)
                      ++++|+|.|+ |.+|+++++.|+..|. ++++++.+.-.                 .+.. ..+.+....+  +++.+..
T Consensus        20 ~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~   98 (228)
T cd00757          20 KNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE   98 (228)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence            4578999986 9999999999999995 56666432100                 0111 1112222223  3455555


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ++ +.+.+.+.++++|+||.+...        + .        .-..+-+.|++.++ .+|+.+.
T Consensus        99 ~i-~~~~~~~~~~~~DvVi~~~d~--------~-~--------~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757          99 RL-DAENAEELIAGYDLVLDCTDN--------F-A--------TRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             ee-CHHHHHHHHhCCCEEEEcCCC--------H-H--------HHHHHHHHHHHcCC-CEEEEEe
Confidence            55 345677788899999998631        1 1        12346778888886 7788655

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.15  E-value=0.0075  Score=50.37  Aligned_cols=104  Identities=16%  Similarity=0.133  Sum_probs=63.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHH-HHHhhhccCCCe--EEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNA-RLYELEKASENL--KLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~~~--~~~~~   62 (319)
                      +..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-..                 +.. ..+.+....+.+  +.+..
T Consensus        23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~  101 (240)
T TIGR02355        23 KASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA  101 (240)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            4578999988 9999999999999994 566666542211                 011 111121122333  33333


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .+ +.+.+.+.+++.|+||.+...        + .        ....+-++|++.++ ++|+-++
T Consensus       102 ~i-~~~~~~~~~~~~DlVvd~~D~--------~-~--------~r~~ln~~~~~~~i-p~v~~~~  147 (240)
T TIGR02355       102 KL-DDAELAALIAEHDIVVDCTDN--------V-E--------VRNQLNRQCFAAKV-PLVSGAA  147 (240)
T ss_pred             cC-CHHHHHHHhhcCCEEEEcCCC--------H-H--------HHHHHHHHHHHcCC-CEEEEEe
Confidence            33 345677788899999997521        1 1        12346678888886 7887554

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.14  E-value=0.0023  Score=53.15  Aligned_cols=115  Identities=17%  Similarity=0.099  Sum_probs=73.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEE---EEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVH---GTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +-||.|.||.|.||+-|...|. ....|.   ..+....+....-+..+   ..  .......+-.+.++.+++++|+||
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI---~T--~s~V~g~~g~~~L~~al~~advVv  101 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHI---NT--NSSVVGFTGADGLENALKGADVVV  101 (345)
T ss_pred             cceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCccccccccc---CC--CCceeccCChhHHHHHhcCCCEEE
Confidence            4689999999999999986654 443332   22222211111111111   11  112233445679999999999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      -=||...-+.+..  ++.+++|......|..++.+...+..|.+=|
T Consensus       102 IPAGVPRKPGMTR--DDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  102 IPAGVPRKPGMTR--DDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             ecCCCCCCCCCcH--HHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            9999765443332  5889999999999999999986654444433

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.14  E-value=0.0038  Score=53.60  Aligned_cols=83  Identities=11%  Similarity=0.031  Sum_probs=50.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCC-hhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPS-DEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      .++++++|.|+ |+.+++++-.|...|. +|++++|+.. ..+...+.+.............++.+.+.+.+.+.++|+|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            45789999998 6669999999999885 8999999864 1233333221110001111112332223345566789999


Q ss_pred             EEeccc
Q 020924           81 FHIACP   86 (319)
Q Consensus        81 i~~a~~   86 (319)
                      ||+...
T Consensus       201 INaTp~  206 (288)
T PRK12749        201 TNGTKV  206 (288)
T ss_pred             EECCCC
Confidence            997644

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.11  E-value=0.0062  Score=56.58  Aligned_cols=77  Identities=17%  Similarity=-0.013  Sum_probs=52.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +++++|+|.|+ |.+|..+++.|.++|++|++++++...........+..  .+++++.++-..      ...++|.||.
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~--~gv~~~~~~~~~------~~~~~D~Vv~   84 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA--LGATVRLGPGPT------LPEDTDLVVT   84 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH--cCCEEEECCCcc------ccCCCCEEEE
Confidence            45789999998 88999999999999999999987653221111222221  356666554222      2346899998


Q ss_pred             ecccCC
Q 020924           83 IACPAP   88 (319)
Q Consensus        83 ~a~~~~   88 (319)
                      ..|...
T Consensus        85 s~Gi~~   90 (480)
T PRK01438         85 SPGWRP   90 (480)
T ss_pred             CCCcCC
Confidence            877643

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.08  E-value=0.011  Score=45.03  Aligned_cols=102  Identities=16%  Similarity=0.116  Sum_probs=62.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHHH-HHhhhccCCC--eEEEEccCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNAR-LYELEKASEN--LKLFKADLL   65 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~~~~~~--~~~~~~Dl~   65 (319)
                      +|+|.|+ |.+|+++++.|+..|. ++++++.+.-..                 +... .+.+....+.  ++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899987 9999999999999996 688776541110                 1111 1111112233  344444444


Q ss_pred             ChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccc
Q 020924           66 DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG  128 (319)
Q Consensus        66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~  128 (319)
                      +. .....++++|+||.+...                 ......+.++|++.++ .+|..++.
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i-~~i~~~~~  123 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-----------------IAVRRALNRACKELGI-PVIDAGGL  123 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEcCC
Confidence            32 335677889999997632                 1123457788888886 77777663

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.07  E-value=0.0063  Score=54.53  Aligned_cols=104  Identities=15%  Similarity=0.092  Sum_probs=65.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCC-----------------hhhHHH-HHhhhccCCCe--EEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPS-----------------DEKNAR-LYELEKASENL--KLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-----------------~~~~~~-~~~~~~~~~~~--~~~~~   62 (319)
                      +.++|+|.|+ |.+|++++..|+..|. ++++++++.-                 ..+... .+.+....+.+  +.+..
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            4578999977 8899999999999996 6888887610                 001111 12222122333  34443


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .++ .+.+.+.++++|+||++...        . .        .-..+-++|++.++ .+|+.+.
T Consensus       213 ~~~-~~~~~~~~~~~D~Vv~~~d~--------~-~--------~r~~ln~~~~~~~i-p~i~~~~  258 (376)
T PRK08762        213 RVT-SDNVEALLQDVDVVVDGADN--------F-P--------TRYLLNDACVKLGK-PLVYGAV  258 (376)
T ss_pred             cCC-hHHHHHHHhCCCEEEECCCC--------H-H--------HHHHHHHHHHHcCC-CEEEEEe
Confidence            443 35667778899999998521        1 1        12236677888886 7888765

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.07  E-value=0.0026  Score=54.32  Aligned_cols=74  Identities=19%  Similarity=0.196  Sum_probs=48.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++++++|+|+ |.+|++++..|++.|++|++.+|+..+.. ...+.+.. .......  +..+     ....++|+||++
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~-~la~~~~~-~~~~~~~--~~~~-----~~~~~~DivIna  185 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE-ELAERFQR-YGEIQAF--SMDE-----LPLHRVDLIINA  185 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhh-cCceEEe--chhh-----hcccCccEEEEC
Confidence            4678999998 89999999999999999999998765321 11122211 1112221  1111     123478999999


Q ss_pred             cccC
Q 020924           84 ACPA   87 (319)
Q Consensus        84 a~~~   87 (319)
                      .+..
T Consensus       186 tp~g  189 (270)
T TIGR00507       186 TSAG  189 (270)
T ss_pred             CCCC
Confidence            8754

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.07  E-value=0.0027  Score=54.05  Aligned_cols=108  Identities=15%  Similarity=0.112  Sum_probs=61.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++|.|| |+-+++++..|++.| .+|+++.|+.++.  ..+.+.... ...+..  .++.+.+...    +.|+||
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra--~~La~~~~~~~~~~~~--~~~~~~~~~~----~~dliI  195 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERA--EELADLFGELGAAVEA--AALADLEGLE----EADLLI  195 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH--HHHHHHhhhccccccc--cccccccccc----ccCEEE
Confidence            4689999998 999999999999999 5899999987743  333222111 111111  1222222111    679999


Q ss_pred             EecccCCCCCCCC-c--------cchhhhhHHH-HHHHHHHHHHhCCCC
Q 020924           82 HIACPAPSTTVPN-P--------QMELLEPAVK-GTLNVVKACLEAKVK  120 (319)
Q Consensus        82 ~~a~~~~~~~~~~-~--------~~~~~~~Nv~-~~~~l~~~~~~~~~~  120 (319)
                      |+........... +        ....++++.. .--.+++.|++.|++
T Consensus       196 NaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         196 NATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             ECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            9876543322111 1        0112233322 233577788877764

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.06  E-value=0.0032  Score=55.44  Aligned_cols=96  Identities=17%  Similarity=0.161  Sum_probs=56.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC---eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY---FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .++|.|.||||++|+.+++.|.+++|   ++..+.......+....       .+......++. .    ..+.++|+||
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-------~~~~~~v~~~~-~----~~~~~~D~vf   74 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-------EGRDYTVEELT-E----DSFDGVDIAL   74 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-------cCceeEEEeCC-H----HHHcCCCEEE
Confidence            47899999999999999999998776   34333322221111000       11122222332 1    2346899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAV  131 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~  131 (319)
                      .+++.. .                 +..+...+.+.|+ ++|=.||....
T Consensus        75 ~a~p~~-~-----------------s~~~~~~~~~~g~-~VIDlS~~fR~  105 (344)
T PLN02383         75 FSAGGS-I-----------------SKKFGPIAVDKGA-VVVDNSSAFRM  105 (344)
T ss_pred             ECCCcH-H-----------------HHHHHHHHHhCCC-EEEECCchhhc
Confidence            876421 1                 2234455555676 78888886543

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.06  E-value=0.012  Score=52.37  Aligned_cols=113  Identities=14%  Similarity=0.105  Sum_probs=72.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-e----EEE--E--EcCCChhhHHHHHhhhcc---CCCeEEEEccCCChhhHHHH
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-F----VHG--T--AREPSDEKNARLYELEKA---SENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~----V~~--~--~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      -||.|+|++|.+|++++-.|+..|. .    |.+  +  +++.+......++-....   ..++.+. .  .+    .+.
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~----y~~  117 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DP----YEV  117 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CC----HHH
Confidence            4799999999999999999988762 2    333  3  665554433333222111   1112111 1  12    356


Q ss_pred             hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEecc
Q 020924           74 IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSS  127 (319)
Q Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS  127 (319)
                      ++++|+||-.||...... .+ -.+.++.|+...+.+...+.++. .. ++|.+|-
T Consensus       118 ~kdaDIVVitAG~prkpg-~t-R~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       118 FEDADWALLIGAKPRGPG-ME-RADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             hCCCCEEEECCCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            789999999998753321 23 36789999999999999999853 43 5666553

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.03  E-value=0.0023  Score=50.90  Aligned_cols=70  Identities=23%  Similarity=0.214  Sum_probs=49.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|. |-||+++++.|..-|.+|++.+|......  ....     ..+        ...++++++.++|+|+.
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~--~~~~-----~~~--------~~~~l~ell~~aDiv~~   97 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE--GADE-----FGV--------EYVSLDELLAQADIVSL   97 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH--HHHH-----TTE--------EESSHHHHHHH-SEEEE
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh--hccc-----ccc--------eeeehhhhcchhhhhhh
Confidence            56899999977 99999999999999999999999876432  1111     111        22367788889999998


Q ss_pred             ecccCC
Q 020924           83 IACPAP   88 (319)
Q Consensus        83 ~a~~~~   88 (319)
                      +...+.
T Consensus        98 ~~plt~  103 (178)
T PF02826_consen   98 HLPLTP  103 (178)
T ss_dssp             -SSSST
T ss_pred             hhcccc
Confidence            876543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08223 hypothetical protein; Validated

Probab=97.03  E-value=0.016  Score=49.37  Aligned_cols=107  Identities=11%  Similarity=0.074  Sum_probs=64.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHH-HHHhhhccCCC--eEEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNA-RLYELEKASEN--LKLFK   61 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~~--~~~~~   61 (319)
                      ++..+|+|.|+ |.+|++++..|+..|. ++.+++.+.-+.                 +.+ ..+.+....+.  ++.+.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34678999988 9999999999999994 566666431111                 000 11112222333  44454


Q ss_pred             ccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           62 ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ..++ .+...++++++|+||++.-.        +       ++..-..+-++|++.++ .+|+.|.
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D~--------~-------~~~~r~~ln~~c~~~~i-P~V~~~~  152 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLDF--------F-------EFDARRLVFAACQQRGI-PALTAAP  152 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCCC--------C-------cHHHHHHHHHHHHHcCC-CEEEEec
Confidence            4554 45577788899999875411        0       01113446678888886 7888544

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.03  E-value=0.0028  Score=53.87  Aligned_cols=58  Identities=19%  Similarity=0.184  Sum_probs=48.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++|+|+|+++.+|+.++..|.++|..|++..++.                            ..+.+.++++|+||
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------------~~l~~~~~~ADIVI  206 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------------KDMASYLKDADVIV  206 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHHhhCCEEE
Confidence            46789999999999999999999999999999887542                            13556677889999


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      ..+|..
T Consensus       207 sAvg~p  212 (286)
T PRK14175        207 SAVGKP  212 (286)
T ss_pred             ECCCCC
Confidence            887653

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.02  E-value=0.0036  Score=54.86  Aligned_cols=100  Identities=18%  Similarity=0.220  Sum_probs=60.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHH-CCCe---EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLS-RDYF---VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      |+-..++|.|.||||++|+.+++.|.+ ..+.   +..+....+..+..   .+.  ...+.+.  ++ +.+    .+.+
T Consensus         1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~---~~~--~~~l~v~--~~-~~~----~~~~   68 (347)
T PRK06728          1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV---QFK--GREIIIQ--EA-KIN----SFEG   68 (347)
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe---eeC--CcceEEE--eC-CHH----HhcC
Confidence            676678999999999999999999985 5666   55554332221111   110  1112221  22 222    2367


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAV  131 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~  131 (319)
                      +|++|.+++.. .                 +..+...+.+.|+ .+|=.||...+
T Consensus        69 ~Divf~a~~~~-~-----------------s~~~~~~~~~~G~-~VID~Ss~fR~  104 (347)
T PRK06728         69 VDIAFFSAGGE-V-----------------SRQFVNQAVSSGA-IVIDNTSEYRM  104 (347)
T ss_pred             CCEEEECCChH-H-----------------HHHHHHHHHHCCC-EEEECchhhcC
Confidence            89999876321 1                 3345666666776 78888886544

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.02  E-value=0.0011  Score=57.31  Aligned_cols=69  Identities=20%  Similarity=0.196  Sum_probs=50.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|+|. |.+|+.++..|...|.+|++.+|++..  ......     .+.+++     ..+.+.+.++++|+||+
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~--~~~~~~-----~G~~~~-----~~~~l~~~l~~aDiVI~  216 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH--LARITE-----MGLSPF-----HLSELAEEVGKIDIIFN  216 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHH-----cCCeee-----cHHHHHHHhCCCCEEEE
Confidence            35789999997 889999999999999999999998543  222221     122322     23466778889999999


Q ss_pred             ec
Q 020924           83 IA   84 (319)
Q Consensus        83 ~a   84 (319)
                      ++
T Consensus       217 t~  218 (296)
T PRK08306        217 TI  218 (296)
T ss_pred             CC
Confidence            75

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.01  E-value=0.0095  Score=48.16  Aligned_cols=103  Identities=13%  Similarity=0.145  Sum_probs=61.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHHH-HHhhhccCC--CeEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNAR-LYELEKASE--NLKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~~~~~--~~~~~~~   62 (319)
                      +.++|+|.|++| +|+++++.|+..|. ++++++...-..                 +... .+.+....+  .++.+..
T Consensus        20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~   98 (197)
T cd01492          20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD   98 (197)
T ss_pred             HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence            457899998755 99999999999995 577776542110                 0000 111111223  3444444


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .++  +...+.++++|+||.+..         +        ......+-+.|++.++ ++|+.++
T Consensus        99 ~~~--~~~~~~~~~~dvVi~~~~---------~--------~~~~~~ln~~c~~~~i-p~i~~~~  143 (197)
T cd01492          99 DIS--EKPEEFFSQFDVVVATEL---------S--------RAELVKINELCRKLGV-KFYATGV  143 (197)
T ss_pred             Ccc--ccHHHHHhCCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            444  234556788999997632         1        1123346678888887 7888776

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=96.99  E-value=0.0018  Score=56.48  Aligned_cols=38  Identities=24%  Similarity=0.342  Sum_probs=35.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      |++..|+|+|.|+ |-||..++..|.+.|++|+++.|+.
T Consensus         1 ~~~~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~   38 (313)
T PRK06249          1 MDSETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD   38 (313)
T ss_pred             CCCcCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            7888899999977 9999999999999999999999975

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.99  E-value=0.0047  Score=55.85  Aligned_cols=71  Identities=18%  Similarity=0.116  Sum_probs=53.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   80 (319)
                      .++|+|+|+|+ |.+|..++..+.+.|++|++++.++..... ...      .  .++..|..|.+.+.++++  ++|.|
T Consensus        10 ~~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-~~a------d--~~~~~~~~d~~~l~~~~~~~~id~v   79 (395)
T PRK09288         10 PSATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAM-QVA------H--RSHVIDMLDGDALRAVIEREKPDYI   79 (395)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchH-Hhh------h--heEECCCCCHHHHHHHHHHhCCCEE
Confidence            34679999987 789999999999999999999987653211 110      1  345678889888888887  78988


Q ss_pred             EEe
Q 020924           81 FHI   83 (319)
Q Consensus        81 i~~   83 (319)
                      +-.
T Consensus        80 i~~   82 (395)
T PRK09288         80 VPE   82 (395)
T ss_pred             EEe
Confidence            864

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.98  E-value=0.013  Score=50.78  Aligned_cols=111  Identities=19%  Similarity=0.144  Sum_probs=70.3

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHH--Hhhhcc-CCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARL--YELEKA-SENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      |.|+|+ |.+|+.++..|+.+|. +|++++++++......+  ...... .....+ ... .|   . +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCCCCEEEEe
Confidence            578998 9999999999998876 99999998664322222  111100 111121 110 12   2 347899999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ++...... .+ ....+..|+.....+++.+.+...+ .+|.+|-
T Consensus        74 ~g~p~~~~-~~-r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          74 AGIPRKPG-MS-RDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             cCCCCCcC-CC-HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            98643321 12 2456778999999999999887654 4455543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.98  E-value=0.012  Score=50.98  Aligned_cols=111  Identities=14%  Similarity=0.092  Sum_probs=73.6

Q ss_pred             EEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            8 VCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      |.|.|+ |.+|+.++-.|+..|  .++++++++.+......  +..........+....  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            468887 889999999999888  78999999876443322  2222111111122211  12    3477899999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      +|...... .+. ...+..|+...+.+.+.+++++.+ .+|.+|-
T Consensus        74 ag~p~~~~-~~R-~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          74 AGAPRKPG-ETR-LDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            98654322 233 677889999999999999988654 4555553

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.96  E-value=0.0037  Score=55.97  Aligned_cols=67  Identities=16%  Similarity=0.224  Sum_probs=53.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |++|+|.|+ |.+|+-++..+.+.|++|++++.++.... ...        --+++.+|..|.+.+.++.+.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa-~~~--------ad~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPA-AQV--------ADEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch-hHh--------CceEEecCCCCHHHHHHHHhcCCEEE
Confidence            468999999 89999999999999999999997655321 111        11456678999999999999999875

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.95  E-value=0.0029  Score=57.75  Aligned_cols=67  Identities=19%  Similarity=0.273  Sum_probs=46.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|.|+||+|.+|+.+++.|.+.|++|++.+|++..... ...+     .++.+       ..+..+.+.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~-~a~~-----~gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE-VAKE-----LGVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH-HHHH-----cCCee-------ccCHHHHhccCCEEEEecC
Confidence            479999999999999999999999999999987653211 1111     12211       1224455677899888763

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.95  E-value=0.0032  Score=56.83  Aligned_cols=74  Identities=11%  Similarity=0.073  Sum_probs=53.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.+++|+|.|+ |..|+.++..|..+| .++++.+|+...  ...+.+..   +.     +.....+++.+.+.++|+||
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~r--a~~La~~~---~~-----~~~~~~~~l~~~l~~aDiVI  247 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEK--AQKITSAF---RN-----ASAHYLSELPQLIKKADIII  247 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHH--HHHHHHHh---cC-----CeEecHHHHHHHhccCCEEE
Confidence            56789999988 999999999999999 479999998653  23332211   11     12233456778888999999


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      ++.+..
T Consensus       248 ~aT~a~  253 (414)
T PRK13940        248 AAVNVL  253 (414)
T ss_pred             ECcCCC
Confidence            998653

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.95  E-value=0.0075  Score=54.77  Aligned_cols=37  Identities=22%  Similarity=0.248  Sum_probs=33.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      .+|+|.|.|. |++|..++..|+++|++|++.++++..
T Consensus         2 ~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~   38 (415)
T PRK11064          2 SFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHA   38 (415)
T ss_pred             CccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence            3478999976 999999999999999999999988764

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.94  E-value=0.0053  Score=54.12  Aligned_cols=76  Identities=17%  Similarity=0.091  Sum_probs=49.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----Ccce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----GCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~   79 (319)
                      +++.|||.||+|.+|++.++-....|..++++.++.+.  .+..+.+     +... ..|..+++-.+...+    ++|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~--~~l~k~l-----GAd~-vvdy~~~~~~e~~kk~~~~~~Dv  228 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK--LELVKKL-----GADE-VVDYKDENVVELIKKYTGKGVDV  228 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch--HHHHHHc-----CCcE-eecCCCHHHHHHHHhhcCCCccE
Confidence            46899999999999999998777788444444555442  2233332     2222 247767544444443    5899


Q ss_pred             EEEecccC
Q 020924           80 VFHIACPA   87 (319)
Q Consensus        80 vi~~a~~~   87 (319)
                      |++|+|..
T Consensus       229 VlD~vg~~  236 (347)
T KOG1198|consen  229 VLDCVGGS  236 (347)
T ss_pred             EEECCCCC
Confidence            99999864

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.94  E-value=0.0091  Score=50.45  Aligned_cols=108  Identities=14%  Similarity=0.231  Sum_probs=64.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChh-----------------hHHH-HHhhhccCCCeEEEEc-
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDE-----------------KNAR-LYELEKASENLKLFKA-   62 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-----------------~~~~-~~~~~~~~~~~~~~~~-   62 (319)
                      +...+|+|.|+ |.+|+++++.|++.| -++++++.+.-..                 +... .+.+....+.+++... 
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            34678999987 999999999999999 6788877542110                 0001 1111122333333222 


Q ss_pred             cCCChhhHHHHhc-CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           63 DLLDYDSVKSAIV-GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        63 Dl~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      +..+.+...+.+. ++|+||.+....                 ..-..|.++|++.++ ++|..+.++
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD~~-----------------~~k~~L~~~c~~~~i-p~I~~gGag  156 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAIDSV-----------------RPKAALIAYCRRNKI-PLVTTGGAG  156 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCCCH-----------------HHHHHHHHHHHHcCC-CEEEECCcc
Confidence            2334555666664 689999875321                 113357888888887 677665533

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.94  E-value=0.0091  Score=51.92  Aligned_cols=67  Identities=15%  Similarity=0.162  Sum_probs=50.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|- |.||+.+++.|..-|.+|++.+|.....            +.+..+    ....++.++++++|+|+.
T Consensus       134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~------------~~~~~~----~~~~~l~e~l~~aDvvv~  196 (312)
T PRK15469        134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW------------PGVQSF----AGREELSAFLSQTRVLIN  196 (312)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC------------CCceee----cccccHHHHHhcCCEEEE
Confidence            56789999976 9999999999999999999998765421            111111    134578889999999998


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      +...
T Consensus       197 ~lPl  200 (312)
T PRK15469        197 LLPN  200 (312)
T ss_pred             CCCC
Confidence            7654

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.93  E-value=0.0043  Score=56.60  Aligned_cols=76  Identities=13%  Similarity=0.023  Sum_probs=54.5

Q ss_pred             CCCCeEEEeCc----------------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC
Q 020924            3 LEKERVCVTGA----------------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD   66 (319)
Q Consensus         3 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   66 (319)
                      +++|+||||+|                ||-.|.+|++++..+|++|+.+.-...-          ..+.+++++.+  ..
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~----------~~p~~v~~i~V--~t  321 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL----------ADPQGVKVIHV--ES  321 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC----------CCCCCceEEEe--cC
Confidence            67899999974                6999999999999999999998733221          01245666544  34


Q ss_pred             hhhHHHHhc---CcceEEEecccCCCC
Q 020924           67 YDSVKSAIV---GCNGVFHIACPAPST   90 (319)
Q Consensus        67 ~~~~~~~~~---~~d~vi~~a~~~~~~   90 (319)
                      .+++.+++.   ..|++|++|++....
T Consensus       322 a~eM~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        322 ARQMLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHHHHHhhCCCCEEEEecccccee
Confidence            444444443   379999999987653

>PRK08328 hypothetical protein; Provisional

Probab=96.93  E-value=0.014  Score=48.48  Aligned_cols=109  Identities=14%  Similarity=0.112  Sum_probs=65.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh------------------hHHH-HHhhhccCC--CeEEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE------------------KNAR-LYELEKASE--NLKLFK   61 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------------------~~~~-~~~~~~~~~--~~~~~~   61 (319)
                      ++.+|+|.|+ |.+|+++++.|+..|. ++++++.+.-+.                  +... .+.+....+  .++.+.
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~  104 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV  104 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            4578999988 9999999999999994 677776442111                  0000 011111123  344444


Q ss_pred             ccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccccc
Q 020924           62 ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGL  133 (319)
Q Consensus        62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~  133 (319)
                      ..+ +.+.+.+.+++.|+||.+...        + .        .-..+-++|++.++ ++|+-++ .+.++
T Consensus       105 ~~~-~~~~~~~~l~~~D~Vid~~d~--------~-~--------~r~~l~~~~~~~~i-p~i~g~~-~g~~G  156 (231)
T PRK08328        105 GRL-SEENIDEVLKGVDVIVDCLDN--------F-E--------TRYLLDDYAHKKGI-PLVHGAV-EGTYG  156 (231)
T ss_pred             ccC-CHHHHHHHHhcCCEEEECCCC--------H-H--------HHHHHHHHHHHcCC-CEEEEee-ccCEE
Confidence            444 345567778889999987521        1 1        12235567778886 7888665 33443

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.92  E-value=0.003  Score=53.98  Aligned_cols=58  Identities=16%  Similarity=0.121  Sum_probs=47.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+|+|.|.|.+|.+|+.++..|+++|+.|++..|...                            ++.++.+++|+||
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------------~l~e~~~~ADIVI  207 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------------DAKALCRQADIVV  207 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------------CHHHHHhcCCEEE
Confidence            467999999999999999999999999999999865432                            3555667788888


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      -+.|..
T Consensus       208 savg~~  213 (301)
T PRK14194        208 AAVGRP  213 (301)
T ss_pred             EecCCh
Confidence            887653

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.91  E-value=0.013  Score=46.36  Aligned_cols=101  Identities=16%  Similarity=0.132  Sum_probs=61.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCC---Chh-------------hHH-HHHhhhccCC--CeEEEEccCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREP---SDE-------------KNA-RLYELEKASE--NLKLFKADLLD   66 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~-------------~~~-~~~~~~~~~~--~~~~~~~Dl~~   66 (319)
                      +|+|.|+ |.+|+++++.|+..|. ++++++.+.   ++.             +.. ....+....+  +++.+...++ 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            5899987 9999999999999997 588888764   110             011 1111111123  3444444443 


Q ss_pred             hhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEecc
Q 020924           67 YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSS  127 (319)
Q Consensus        67 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS  127 (319)
                      .+.+.+.++++|+||.+...        + .        .-..+.+.+.+. ++ .+|+-+.
T Consensus        79 ~~~~~~~l~~~DlVi~~~d~--------~-~--------~r~~i~~~~~~~~~i-p~i~~~~  122 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFDN--------A-E--------TKAMLAESLLGNKNK-PVVCASG  122 (174)
T ss_pred             hhhHHHHhcCCCEEEECCCC--------H-H--------HHHHHHHHHHHHCCC-CEEEEeh
Confidence            35677788899999997421        1 1        122366677666 64 6776543

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.90  E-value=0.0057  Score=52.49  Aligned_cols=76  Identities=20%  Similarity=0.166  Sum_probs=49.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ..+++|+|.|+ |..|++++..|.+.|. +|++++|+..+.... .+.+....+...+..     .+++.+.+.++|+||
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~l-a~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVI  197 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAAL-ADELNARFPAARATA-----GSDLAAALAAADGLV  197 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHHHHhhCCCeEEEe-----ccchHhhhCCCCEEE
Confidence            34679999988 8899999999999996 799999986643221 122211111222211     123445667899999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      ++..
T Consensus       198 naTp  201 (284)
T PRK12549        198 HATP  201 (284)
T ss_pred             ECCc
Confidence            9853

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.90  E-value=0.024  Score=47.46  Aligned_cols=95  Identities=12%  Similarity=0.060  Sum_probs=70.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      +++|+|.|||+ =|+.+++.|.+.|+.|++..-.....    .     .......+.+-+.+.+.+.+.++  +++.||+
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~----~-----~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VID   71 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG----P-----ADLPGPVRVGGFGGAEGLAAYLREEGIDLVID   71 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC----c-----ccCCceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence            46899999986 69999999999999988766554322    0     12356777788879999999987  6999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEE
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV  124 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~  124 (319)
                      ..         +|....      .+.++.++|.+.++.-+=|
T Consensus        72 AT---------HPfA~~------is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         72 AT---------HPYAAQ------ISANAAAACRALGIPYLRL   98 (248)
T ss_pred             CC---------CccHHH------HHHHHHHHHHHhCCcEEEE
Confidence            64         442322      2678899999999853333

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.89  E-value=0.0018  Score=50.76  Aligned_cols=65  Identities=22%  Similarity=0.199  Sum_probs=44.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |++|.+.|- |-.|+.+++.|+++|++|++.+|++++.  ..+.+     .+++.       .++..++.+++|+|+-+.
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~--~~~~~-----~g~~~-------~~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKA--EALAE-----AGAEV-------ADSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH--HHHHH-----TTEEE-------ESSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhh--hhhHH-----hhhhh-------hhhhhhHhhcccceEeec
Confidence            579999987 9999999999999999999999886532  22221     12222       134566677778888875

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.89  E-value=0.0029  Score=56.59  Aligned_cols=35  Identities=23%  Similarity=0.330  Sum_probs=32.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTARE   38 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (319)
                      .+++|.|.||+|.+|+.+++.|.+.|++|++.+|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            35789999999999999999999999999999875

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.89  E-value=0.0092  Score=48.55  Aligned_cols=71  Identities=25%  Similarity=0.213  Sum_probs=51.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++|+|.|| |-+|..-++.|++.|.+|++++....+.    +..+.. ..+++++..+... +    .+++++.||
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~----l~~l~~-~~~i~~~~~~~~~-~----dl~~~~lVi   74 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESE----LTLLAE-QGGITWLARCFDA-D----ILEGAFLVI   74 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHH----HHHHHH-cCCEEEEeCCCCH-H----HhCCcEEEE
Confidence            467899999998 9999999999999999999998665432    112211 2478888887652 2    256777777


Q ss_pred             Ee
Q 020924           82 HI   83 (319)
Q Consensus        82 ~~   83 (319)
                      -+
T Consensus        75 ~a   76 (205)
T TIGR01470        75 AA   76 (205)
T ss_pred             EC
Confidence            54

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.87  E-value=0.014  Score=51.83  Aligned_cols=105  Identities=13%  Similarity=0.059  Sum_probs=64.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hH-HHHHhhhccCCC--eEEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KN-ARLYELEKASEN--LKLFK   61 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~-~~~~~~~~~~~~--~~~~~   61 (319)
                      +++.+|+|.|+ |.+|+++++.|+..|. ++++++.+.-..                 +. ...+.+....+.  ++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            34679999988 9999999999999995 577776542100                 11 111222222333  44444


Q ss_pred             ccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           62 ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ..++ .+...+.++++|+||.+...                 ...-..+-++|++.++ .+|+.++
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d~-----------------~~~r~~~n~~c~~~~i-p~v~~~~  151 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSDN-----------------FDTRHLASWAAARLGI-PHVWASI  151 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEE
Confidence            5554 34566778899999998621                 1112235667777776 6887655

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.85  E-value=0.0074  Score=53.85  Aligned_cols=75  Identities=11%  Similarity=-0.005  Sum_probs=54.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ...+|+|+|+ |-+|+.+++.|...|.+|++++|++..  ...+....   .  ..+..+..+.+.+.+.+.++|+||++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~--~~~l~~~~---g--~~v~~~~~~~~~l~~~l~~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDR--LRQLDAEF---G--GRIHTRYSNAYEIEDAVKRADLLIGA  237 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHH--HHHHHHhc---C--ceeEeccCCHHHHHHHHccCCEEEEc
Confidence            3467999988 999999999999999999999987542  22222111   1  11233556777888889999999998


Q ss_pred             ccc
Q 020924           84 ACP   86 (319)
Q Consensus        84 a~~   86 (319)
                      +..
T Consensus       238 ~~~  240 (370)
T TIGR00518       238 VLI  240 (370)
T ss_pred             ccc
Confidence            754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.84  E-value=0.016  Score=48.63  Aligned_cols=104  Identities=18%  Similarity=0.166  Sum_probs=64.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHHH-HHhhhccCC--CeEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNAR-LYELEKASE--NLKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~~~~~--~~~~~~~   62 (319)
                      +.++|+|.|+ |.+|+++++.|+..|. ++++++.+.-+.                 +... .+.+....+  .++.+..
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~  109 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA  109 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            4679999998 9999999999999994 677776541110                 0100 111221223  3444544


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .++ .+.+.+.++++|+||.+...        + .        .-..+-++|++.++ .+|+.++
T Consensus       110 ~i~-~~~~~~~~~~~DiVi~~~D~--------~-~--------~r~~ln~~~~~~~i-p~v~~~~  155 (245)
T PRK05690        110 RLD-DDELAALIAGHDLVLDCTDN--------V-A--------TRNQLNRACFAAKK-PLVSGAA  155 (245)
T ss_pred             cCC-HHHHHHHHhcCCEEEecCCC--------H-H--------HHHHHHHHHHHhCC-EEEEeee
Confidence            443 45567788899999998521        1 1        12346677877776 7887544

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.83  E-value=0.0057  Score=47.48  Aligned_cols=34  Identities=24%  Similarity=0.239  Sum_probs=31.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTA   36 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~   36 (319)
                      ++++++|+|.|| |-+|...++.|++.|++|++++
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            467899999998 9999999999999999999985

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.82  E-value=0.0068  Score=45.91  Aligned_cols=58  Identities=17%  Similarity=0.146  Sum_probs=47.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++|+|+|.|.+.-+|+.++..|.++|..|+...++..                            ++++..+++|+||
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------------~l~~~v~~ADIVv   76 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------------QLQSKVHDADVVV   76 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------------CHHHHHhhCCEEE
Confidence            468999999999999999999999999999988764322                            3455677888888


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      -..+..
T Consensus        77 sAtg~~   82 (140)
T cd05212          77 VGSPKP   82 (140)
T ss_pred             EecCCC
Confidence            887754

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.82  E-value=0.0011  Score=53.06  Aligned_cols=34  Identities=18%  Similarity=0.278  Sum_probs=27.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|.|.|. |++|..++..|++.||+|++++.++.
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~   34 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEE   34 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChH
Confidence            57999965 99999999999999999999998765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.81  E-value=0.021  Score=49.72  Aligned_cols=72  Identities=17%  Similarity=0.102  Sum_probs=51.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +++|+|+|+. .+|...++.....|.+|++++|++++.  +..+++     +...+. |-+|.+..+.+-+.+|++|.++
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~--e~a~~l-----GAd~~i-~~~~~~~~~~~~~~~d~ii~tv  237 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKL--ELAKKL-----GADHVI-NSSDSDALEAVKEIADAIIDTV  237 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHH--HHHHHh-----CCcEEE-EcCCchhhHHhHhhCcEEEECC
Confidence            6899999995 999999988888999999999998743  222332     223332 3235655665555599999998


Q ss_pred             c
Q 020924           85 C   85 (319)
Q Consensus        85 ~   85 (319)
                      +
T Consensus       238 ~  238 (339)
T COG1064         238 G  238 (339)
T ss_pred             C
Confidence            6

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.81  E-value=0.0059  Score=53.45  Aligned_cols=99  Identities=20%  Similarity=0.179  Sum_probs=57.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCC---CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRD---YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |. ++++|.|.||||++|+.+++.|.++.   .++..+....+..+...   +.  ...+.+-  ++   +.  ..+.++
T Consensus         1 ~~-~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~---~~--~~~~~v~--~~---~~--~~~~~~   67 (336)
T PRK08040          1 MS-EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR---FG--GKSVTVQ--DA---AE--FDWSQA   67 (336)
T ss_pred             CC-CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE---EC--CcceEEE--eC---ch--hhccCC
Confidence            53 55799999999999999999998843   55666554332211100   00  0011111  21   11  223578


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAV  131 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~  131 (319)
                      |++|.+++..                  .+..++..+.+.|+ ++|=.||....
T Consensus        68 Dvvf~a~p~~------------------~s~~~~~~~~~~g~-~VIDlS~~fRl  102 (336)
T PRK08040         68 QLAFFVAGRE------------------ASAAYAEEATNAGC-LVIDSSGLFAL  102 (336)
T ss_pred             CEEEECCCHH------------------HHHHHHHHHHHCCC-EEEECChHhcC
Confidence            9888876321                  13346666666777 78888886543

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.79  E-value=0.0032  Score=55.27  Aligned_cols=77  Identities=18%  Similarity=0.185  Sum_probs=47.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc---CCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA---SENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ||+|.|.|+ |.+|+.++..|++.|++|++.+|++...  ..+......   .+.... ...+.-..+..+.++++|+||
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi   76 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQA--AEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLIL   76 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEE
Confidence            368999987 9999999999999999999999875432  222211000   000000 001111224455677899999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      -+..
T Consensus        77 ~~v~   80 (325)
T PRK00094         77 VAVP   80 (325)
T ss_pred             EeCC
Confidence            8763

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.78  E-value=0.0062  Score=47.18  Aligned_cols=59  Identities=17%  Similarity=0.174  Sum_probs=43.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++|+|+|.|.+..+|+.++..|.++|..|+....+.                            .++++..+++|+||
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------------~~l~~~~~~ADIVV   84 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------------KNLQEITRRADIVV   84 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------------SSHHHHHTTSSEEE
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------------CcccceeeeccEEe
Confidence            36789999999999999999999999999998865432                            23555667889999


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      -.+|...
T Consensus        85 sa~G~~~   91 (160)
T PF02882_consen   85 SAVGKPN   91 (160)
T ss_dssp             E-SSSTT
T ss_pred             eeecccc
Confidence            8887643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.77  E-value=0.007  Score=51.93  Aligned_cols=78  Identities=19%  Similarity=0.050  Sum_probs=50.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .++++++|.|+ |..|++++..|.+.|. +|++++|+.++.  ..+.+.......+  .  .+...+++...+.++|+||
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka--~~La~~~~~~~~~--~--~~~~~~~~~~~~~~~DiVI  195 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKL--SRLVDLGVQVGVI--T--RLEGDSGGLAIEKAAEVLV  195 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHH--HHHHHHhhhcCcc--e--eccchhhhhhcccCCCEEE
Confidence            35789999987 9999999999999995 799999986633  2332211100111  1  1111233445557899999


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      |+....
T Consensus       196 naTp~g  201 (282)
T TIGR01809       196 STVPAD  201 (282)
T ss_pred             ECCCCC
Confidence            987543

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.76  E-value=0.0045  Score=58.63  Aligned_cols=71  Identities=11%  Similarity=0.084  Sum_probs=55.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      .+|+|.|+ |-+|++++++|.++|++|++++.+++.  ....++     .+...+.+|.+|++.++++ ++++|.++-+.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~--~~~~~~-----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTR--VDELRE-----RGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHH--HHHHHH-----CCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            46899987 999999999999999999999977653  222222     3678999999999988865 45778776543

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.76  E-value=0.0056  Score=52.43  Aligned_cols=56  Identities=14%  Similarity=0.118  Sum_probs=45.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++++|+|+|.|.++.+|+.++..|+++|+.|++.. |+.                             .+.++.+++|+|
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-----------------------------~l~e~~~~ADIV  205 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-----------------------------DLPAVCRRADIL  205 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-----------------------------CHHHHHhcCCEE
Confidence            46799999999999999999999999999999874 332                             135566678888


Q ss_pred             EEeccc
Q 020924           81 FHIACP   86 (319)
Q Consensus        81 i~~a~~   86 (319)
                      |-+.+.
T Consensus       206 Isavg~  211 (296)
T PRK14188        206 VAAVGR  211 (296)
T ss_pred             EEecCC
Confidence            888764

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.74  E-value=0.023  Score=53.01  Aligned_cols=78  Identities=12%  Similarity=-0.011  Sum_probs=51.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++.+++|+|.|. |..|..+++.|.++|++|++.+.+........++.   ...++++..++..     ...++++|.|
T Consensus         3 ~~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~---~~~~~~~~~g~~~-----~~~~~~~d~v   73 (498)
T PRK02006          3 GDLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAPPNLAALRA---ELPDAEFVGGPFD-----PALLDGVDLV   73 (498)
T ss_pred             cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCchhHHHHHh---hcCCcEEEeCCCc-----hhHhcCCCEE
Confidence            5666789999996 78999999999999999999987653211112221   1224455444321     1234578999


Q ss_pred             EEecccC
Q 020924           81 FHIACPA   87 (319)
Q Consensus        81 i~~a~~~   87 (319)
                      |...|..
T Consensus        74 v~sp~I~   80 (498)
T PRK02006         74 ALSPGLS   80 (498)
T ss_pred             EECCCCC
Confidence            9987754

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.74  E-value=0.0062  Score=55.50  Aligned_cols=72  Identities=21%  Similarity=0.203  Sum_probs=51.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.+++|+|.|+ |.+|+.+++.|...|. +|++.+|+....  ..+....    +.     +..+.+++.+.+.++|+||
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra--~~la~~~----g~-----~~~~~~~~~~~l~~aDvVI  247 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERA--EELAEEF----GG-----EAIPLDELPEALAEADIVI  247 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHH--HHHHHHc----CC-----cEeeHHHHHHHhccCCEEE
Confidence            46789999987 9999999999999997 799999876532  2121110    11     2223356677778999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+.+.
T Consensus       248 ~aT~s  252 (423)
T PRK00045        248 SSTGA  252 (423)
T ss_pred             ECCCC
Confidence            98754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.73  E-value=0.022  Score=52.41  Aligned_cols=119  Identities=15%  Similarity=0.127  Sum_probs=70.5

Q ss_pred             EeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecccCCC
Q 020924           10 VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPS   89 (319)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   89 (319)
                      |+||+|.+|.++++.|...|.+|++..+...+...       ....++.-+..|.+..+...+                 
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~-----------------   98 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-------GWGDRFGALVFDATGITDPAD-----------------   98 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc-------CcCCcccEEEEECCCCCCHHH-----------------
Confidence            88889999999999999999999987654431100       001122222233332221111                 


Q ss_pred             CCCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHH
Q 020924           90 TTVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE  167 (319)
Q Consensus        90 ~~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~  167 (319)
                                    +.+...+++++.+.  ...+||+++|.....+                        ...|+.+|.+
T Consensus        99 --------------l~~~~~~~~~~l~~l~~~griv~i~s~~~~~~------------------------~~~~~~akaa  140 (450)
T PRK08261         99 --------------LKALYEFFHPVLRSLAPCGRVVVLGRPPEAAA------------------------DPAAAAAQRA  140 (450)
T ss_pred             --------------HHHHHHHHHHHHHhccCCCEEEEEccccccCC------------------------chHHHHHHHH
Confidence                          11222333333322  2359999998644211                        1239999999


Q ss_pred             HHHHHHHhhhhC--CceEEEEecCc
Q 020924          168 AESEALEFGKKT--GLDVVTICPNL  190 (319)
Q Consensus       168 ~e~~~~~~~~~~--~~~~~~lrp~~  190 (319)
                      .+.+++.++++.  ++.+..+.|+.
T Consensus       141 l~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        141 LEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHHHHhhcCCEEEEEecCC
Confidence            998888877663  67887787653

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.72  E-value=0.013  Score=47.51  Aligned_cols=79  Identities=15%  Similarity=0.168  Sum_probs=52.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcC---CChhh-------------HHH-HHhhhccCC--CeEEEEc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTARE---PSDEK-------------NAR-LYELEKASE--NLKLFKA   62 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~-------------~~~-~~~~~~~~~--~~~~~~~   62 (319)
                      ++.++|+|.|+ |.+|+.++..|++.|. ++++++++   .++..             ... .+.+....+  .++.+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            34678999998 8899999999999998 68888876   22110             000 011111122  3455555


Q ss_pred             cCCChhhHHHHhcCcceEEEe
Q 020924           63 DLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +++ .+.+.+.++++|+||.+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            554 45677788899999997

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.72  E-value=0.0098  Score=53.12  Aligned_cols=69  Identities=28%  Similarity=0.148  Sum_probs=50.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|+|.|.|. |-||+.+++.|..-|.+|++.+|......  ....     .       ++.-..+++++++.+|+|+.
T Consensus       190 L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~--~~~~-----~-------g~~~~~~l~ell~~aDvV~l  254 (385)
T PRK07574        190 LEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEE--VEQE-----L-------GLTYHVSFDSLVSVCDVVTI  254 (385)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchh--hHhh-----c-------CceecCCHHHHhhcCCEEEE
Confidence            56789999977 99999999999999999999998753211  1100     1       12222357888999999988


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      +...
T Consensus       255 ~lPl  258 (385)
T PRK07574        255 HCPL  258 (385)
T ss_pred             cCCC
Confidence            7644

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.72  E-value=0.013  Score=48.50  Aligned_cols=106  Identities=14%  Similarity=0.138  Sum_probs=62.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHHH-HHhhhccCCC--eEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNAR-LYELEKASEN--LKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~~~~~~--~~~~~~   62 (319)
                      ++.+|+|.|. |.+|+++++.|++.|. ++++++.+.-..                 +.+. .+.+....+.  ++.+..
T Consensus        10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~   88 (231)
T cd00755          10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE   88 (231)
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence            4578999987 9999999999999995 677776442110                 0011 1111112233  333433


Q ss_pred             cCCChhhHHHHhc-CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           63 DLLDYDSVKSAIV-GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        63 Dl~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      .++ .+.+...+. ++|+||.+...                 ......|.+.|++.++ ++|...+.+
T Consensus        89 ~i~-~~~~~~l~~~~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~i-p~I~s~g~g  137 (231)
T cd00755          89 FLT-PDNSEDLLGGDPDFVVDAIDS-----------------IRAKVALIAYCRKRKI-PVISSMGAG  137 (231)
T ss_pred             ecC-HhHHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHhCC-CEEEEeCCc
Confidence            343 344555554 68999987521                 1123457788888886 676655533

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.71  E-value=0.0044  Score=56.29  Aligned_cols=72  Identities=17%  Similarity=0.195  Sum_probs=51.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.+++|+|.|+ |.+|+.+++.|...| .+|++++|+...... ....+     +...+     +.+++.+.+.++|+||
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~-la~~~-----g~~~i-----~~~~l~~~l~~aDvVi  245 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAED-LAKEL-----GGEAV-----KFEDLEEYLAEADIVI  245 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHHHc-----CCeEe-----eHHHHHHHHhhCCEEE
Confidence            45689999987 999999999999999 789999997653211 11111     11122     2346777788999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+.+.
T Consensus       246 ~aT~s  250 (417)
T TIGR01035       246 SSTGA  250 (417)
T ss_pred             ECCCC
Confidence            98653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.69  E-value=0.015  Score=50.63  Aligned_cols=79  Identities=18%  Similarity=0.127  Sum_probs=49.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH--HHH----HhhhccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN--ARL----YELEKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      .++|.|.|+ |.+|+.++..|+..|++|++.++++.....  ..+    ..+...+.........++-..+++++++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            368999987 999999999999999999999987653211  111    1110000000000011222235667888999


Q ss_pred             eEEEec
Q 020924           79 GVFHIA   84 (319)
Q Consensus        79 ~vi~~a   84 (319)
                      .|+-++
T Consensus        86 lViEav   91 (321)
T PRK07066         86 FIQESA   91 (321)
T ss_pred             EEEECC
Confidence            999976

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.69  E-value=0.013  Score=51.71  Aligned_cols=33  Identities=30%  Similarity=0.390  Sum_probs=27.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTARE   38 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (319)
                      ++|.|+|+||++|+++++.|.++. .++..+.++
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            479999999999999999998866 688877543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.68  E-value=0.0075  Score=55.45  Aligned_cols=36  Identities=17%  Similarity=0.289  Sum_probs=30.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSD   41 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~   41 (319)
                      ||+|.|.|. |++|..++..|+++  |++|+++++++..
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~   38 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR   38 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH
Confidence            468999966 99999999999988  5889999987664

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.66  E-value=0.0074  Score=46.55  Aligned_cols=69  Identities=17%  Similarity=0.215  Sum_probs=45.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|+++|+|= |.+|+.+++.|...|.+|++..+++-.......       .+++..        .+++++..+|++|.
T Consensus        21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-------dGf~v~--------~~~~a~~~adi~vt   84 (162)
T PF00670_consen   21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAM-------DGFEVM--------TLEEALRDADIFVT   84 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-------TT-EEE---------HHHHTTT-SEEEE
T ss_pred             eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-------cCcEec--------CHHHHHhhCCEEEE
Confidence            56899999977 999999999999999999999887653322222       334432        36678889999999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +.|..
T Consensus        85 aTG~~   89 (162)
T PF00670_consen   85 ATGNK   89 (162)
T ss_dssp             -SSSS
T ss_pred             CCCCc
Confidence            87754

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.66  E-value=0.0076  Score=52.53  Aligned_cols=72  Identities=18%  Similarity=0.165  Sum_probs=50.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.+++|+|.|+ |-+|+.+++.|...| .+|++++|++..... ...++     +..     ..+.+++.+.+.++|+||
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~-la~~~-----g~~-----~~~~~~~~~~l~~aDvVi  243 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE-LAKEL-----GGN-----AVPLDELLELLNEADVVI  243 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHc-----CCe-----EEeHHHHHHHHhcCCEEE
Confidence            35789999988 999999999998866 789999987653211 11111     112     223345777788899999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+.+.
T Consensus       244 ~at~~  248 (311)
T cd05213         244 SATGA  248 (311)
T ss_pred             ECCCC
Confidence            98753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.65  E-value=0.015  Score=49.55  Aligned_cols=71  Identities=13%  Similarity=0.031  Sum_probs=43.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHH--CCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLS--RDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++++|.|.|. |.||+.+++.|.+  .++++.++...... .........    +.      ..-..++++++.++|+|
T Consensus         4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~-~a~~~a~~~----g~------~~~~~~~eell~~~D~V   71 (271)
T PRK13302          4 RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQ-RHADFIWGL----RR------PPPVVPLDQLATHADIV   71 (271)
T ss_pred             CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHH-HHHHHHHhc----CC------CcccCCHHHHhcCCCEE
Confidence            66789999986 9999999999986  37888755443222 222211110    00      00112345556789999


Q ss_pred             EEecc
Q 020924           81 FHIAC   85 (319)
Q Consensus        81 i~~a~   85 (319)
                      +-++.
T Consensus        72 vi~tp   76 (271)
T PRK13302         72 VEAAP   76 (271)
T ss_pred             EECCC
Confidence            99875

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.64  E-value=0.004  Score=50.51  Aligned_cols=38  Identities=21%  Similarity=0.184  Sum_probs=33.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ++++|+|+|+|. |.+|+++++.|.+.|++|++.+++..
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~   62 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEE   62 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            367899999998 79999999999999999998887654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.63  E-value=0.0055  Score=57.34  Aligned_cols=37  Identities=19%  Similarity=-0.001  Sum_probs=33.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +++++++|+|+ |.+|++++..|++.|++|++++|+.+
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e  413 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYE  413 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            56789999999 89999999999999999999988754

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.62  E-value=0.003  Score=49.10  Aligned_cols=74  Identities=16%  Similarity=0.180  Sum_probs=46.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ||.|.|| |..|.+++..|.++|++|++..|+++.  ...++.-..   ..++.+.-. .+.=..+++++++++|+||-.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~--~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~Iiia   76 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQ--IEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIA   76 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHH--HHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHH--HHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEec
Confidence            6899988 999999999999999999999997642  222222111   011221111 111124577888999999875


Q ss_pred             c
Q 020924           84 A   84 (319)
Q Consensus        84 a   84 (319)
                      .
T Consensus        77 v   77 (157)
T PF01210_consen   77 V   77 (157)
T ss_dssp             S
T ss_pred             c
Confidence            4

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.62  E-value=0.0094  Score=53.23  Aligned_cols=73  Identities=19%  Similarity=0.228  Sum_probs=57.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++||.|+ |=+|.-++++|.++| .+|++.+|+..+.  ..+....    +     ++....+.+...+..+|+||
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA--~~La~~~----~-----~~~~~l~el~~~l~~~DvVi  243 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERA--EELAKKL----G-----AEAVALEELLEALAEADVVI  243 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHH--HHHHHHh----C-----CeeecHHHHHHhhhhCCEEE
Confidence            56789999998 999999999999999 7899999987743  3332221    1     56667778888999999999


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      .+.+..
T Consensus       244 ssTsa~  249 (414)
T COG0373         244 SSTSAP  249 (414)
T ss_pred             EecCCC
Confidence            987653

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.62  E-value=0.047  Score=47.24  Aligned_cols=108  Identities=15%  Similarity=0.075  Sum_probs=72.0

Q ss_pred             EeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhc--cC-CCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924           10 VTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEK--AS-ENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |.|+ |.+|+.++-.|+..+  -++.+++++........++-...  .. ..+++..   .+    .+.++++|+||-.|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence            4565 999999999998877  37899998766443333322111  11 1223321   22    35678999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |...... .+. .+.++.|+...+.+.+.+.+++.+ .+|.+|-
T Consensus        73 g~~rk~g-~~R-~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        73 GAPQKPG-ETR-LELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             CCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            9753322 233 688999999999999999988654 5555554

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.59  E-value=0.016  Score=50.95  Aligned_cols=117  Identities=20%  Similarity=0.085  Sum_probs=65.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeE-EEE---cc--CCChhhHHHHhcCcce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLK-LFK---AD--LLDYDSVKSAIVGCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~---~D--l~~~~~~~~~~~~~d~   79 (319)
                      |+|.|.|. |++|.-.+-.|++.||+|++++.++.+.....-...+-..++++ +++   .+  ++--.+.++++++.|+
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            57899965 99999999999999999999998876543222111111111110 000   01  2112356677888999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecccccc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAV  131 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~  131 (319)
                      +|-+.|-....        .-..+......+++...+...+ ++|.+=|+-.+
T Consensus        80 ~fIavgTP~~~--------dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPv  124 (414)
T COG1004          80 VFIAVGTPPDE--------DGSADLSYVEAVAKDIGEILDGKAVVVIKSTVPV  124 (414)
T ss_pred             EEEEcCCCCCC--------CCCccHHHHHHHHHHHHhhcCCCeEEEEcCCCCC
Confidence            99888743321        1122233344444444444322 66666554433

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.58  E-value=0.0028  Score=54.50  Aligned_cols=40  Identities=20%  Similarity=0.106  Sum_probs=35.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |.+.+++|.|.|+ |.+|+.++..|+..|++|++.+++++.
T Consensus         1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~   40 (286)
T PRK07819          1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEEL   40 (286)
T ss_pred             CCCCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            6666679999988 999999999999999999999998765

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.57  E-value=0.048  Score=45.70  Aligned_cols=94  Identities=17%  Similarity=0.202  Sum_probs=66.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+|||.|||+ =|+.+++.|.++|+ |++..-......  ...   ...+...++.+-+.+.+.+.+.++  +++.||+.
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~--~~~---~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGE--LLK---PELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA   73 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHh--hhc---cccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            6899999986 69999999999998 655443333211  110   112456778888879999999986  79999996


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCE
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR  121 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~  121 (319)
                      .         +|....+      +.+..++|++.++.-
T Consensus        74 T---------HPfA~~i------s~na~~a~~~~~ipy   96 (249)
T PF02571_consen   74 T---------HPFAAEI------SQNAIEACRELGIPY   96 (249)
T ss_pred             C---------CchHHHH------HHHHHHHHhhcCcce
Confidence            4         4433322      678899999999853

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.56  E-value=0.025  Score=50.43  Aligned_cols=104  Identities=16%  Similarity=0.118  Sum_probs=64.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHH-HHHhhhccCC--CeEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNA-RLYELEKASE--NLKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~--~~~~~~~   62 (319)
                      +..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-..                 +.. ..+.+....+  .++.+..
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~  118 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE  118 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence            4578999988 9999999999999994 788877651100                 111 1111111123  3445554


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .++ .+...+.++++|+||.|...                 ...-..+-++|++.++ .+|+.+.
T Consensus       119 ~i~-~~~~~~~~~~~DlVid~~Dn-----------------~~~r~~in~~~~~~~i-P~v~~~~  164 (370)
T PRK05600        119 RLT-AENAVELLNGVDLVLDGSDS-----------------FATKFLVADAAEITGT-PLVWGTV  164 (370)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEE
Confidence            554 45677788999999998621                 1112235567777776 6777554

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.54  E-value=0.027  Score=52.08  Aligned_cols=76  Identities=13%  Similarity=0.103  Sum_probs=51.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh----------------h
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY----------------D   68 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----------------~   68 (319)
                      +.+|+|+|+ |-+|...+..+...|.+|+++++++..  .+..+.+     +.+++..|..+.                +
T Consensus       165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~r--le~aesl-----GA~~v~i~~~e~~~~~~gya~~~s~~~~~  236 (509)
T PRK09424        165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEV--AEQVESM-----GAEFLELDFEEEGGSGDGYAKVMSEEFIK  236 (509)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc-----CCeEEEeccccccccccchhhhcchhHHH
Confidence            578999988 999999999999999999999987653  3333332     344443333221                1


Q ss_pred             hH----HHHhcCcceEEEecccCC
Q 020924           69 SV----KSAIVGCNGVFHIACPAP   88 (319)
Q Consensus        69 ~~----~~~~~~~d~vi~~a~~~~   88 (319)
                      ..    .+..+++|+||.+++...
T Consensus       237 ~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        237 AEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHhccCCCCEEEECCCCCc
Confidence            11    122356999999998654

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.53  E-value=0.011  Score=51.83  Aligned_cols=36  Identities=31%  Similarity=0.371  Sum_probs=32.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +.+++|+||+|.+|.++++.+...|.+|+++.+++.
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~  198 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE  198 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence            568999999999999999999999999999987654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.52  E-value=0.016  Score=55.26  Aligned_cols=71  Identities=14%  Similarity=0.216  Sum_probs=56.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      .+|+|+|. |-+|+.+++.|.++|+++++++.+++..  +..++     .+...+.+|.++++.++++ ++++|.+|-+.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v--~~~~~-----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAV--NLMRK-----YGYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHH--HHHHh-----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            57999986 9999999999999999999999876532  22222     3678899999999988876 56788888764

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.50  E-value=0.01  Score=51.76  Aligned_cols=36  Identities=19%  Similarity=0.197  Sum_probs=32.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ++|+|.|.|+ |.+|++++..|.+.|++|++.+|+..
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4578999976 99999999999999999999998754

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.49  E-value=0.015  Score=49.78  Aligned_cols=79  Identities=16%  Similarity=0.197  Sum_probs=49.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHh-hhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYE-LEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      .++++++|.|+ |+.|++++-.|++.|. +|++++|+.++.  ..+.+ +....+.......+   ...+...+.++|+|
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka--~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~div  198 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA--QALADVINNAVGREAVVGVD---ARGIEDVIAAADGV  198 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH--HHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEE
Confidence            35689999998 9999999999999995 799999976543  22222 11100110111122   22233345678999


Q ss_pred             EEecccC
Q 020924           81 FHIACPA   87 (319)
Q Consensus        81 i~~a~~~   87 (319)
                      ||+....
T Consensus       199 INaTp~G  205 (283)
T PRK14027        199 VNATPMG  205 (283)
T ss_pred             EEcCCCC
Confidence            9987543

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.48  E-value=0.018  Score=49.87  Aligned_cols=84  Identities=14%  Similarity=0.107  Sum_probs=53.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +.+|.|.||||++|..+++.|.++. .++..+..+...                     |+.   ..+..+.++|++|-+
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------------~~~---~~~~~~~~~DvvFla   57 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------------DAA---ARRELLNAADVAILC   57 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------------ccc---CchhhhcCCCEEEEC
Confidence            4689999999999999999998875 355555433221                     111   122345678988886


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAV  131 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~  131 (319)
                      .... .                 +..+...+.+.|+ ++|=+|+....
T Consensus        58 lp~~-~-----------------s~~~~~~~~~~g~-~VIDlSadfRl   86 (313)
T PRK11863         58 LPDD-A-----------------AREAVALIDNPAT-RVIDASTAHRT   86 (313)
T ss_pred             CCHH-H-----------------HHHHHHHHHhCCC-EEEECChhhhc
Confidence            5211 0                 2335555556676 79989886543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.47  E-value=0.012  Score=51.91  Aligned_cols=37  Identities=27%  Similarity=0.349  Sum_probs=32.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .+.+|+|+||+|.+|..+++.+...|.+|++++++.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~  187 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE  187 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            3579999999999999999888889999999887754

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.46  E-value=0.035  Score=50.00  Aligned_cols=109  Identities=17%  Similarity=0.015  Sum_probs=65.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHH-HHHhhhccCCC--eEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNA-RLYELEKASEN--LKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~~--~~~~~~   62 (319)
                      +..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-..                 +.. ..+.+....+.  ++.+..
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  119 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF  119 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence            4578999988 9999999999999985 566666431110                 011 11111112233  444555


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccccccc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGL  133 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~  133 (319)
                      .++ .+...+.++++|+||.+...                 ...-..+-++|++.++ .+|+.++ .++++
T Consensus       120 ~i~-~~~~~~~~~~~D~Vvd~~d~-----------------~~~r~~ln~~~~~~~~-p~v~~~~-~g~~G  170 (392)
T PRK07878        120 RLD-PSNAVELFSQYDLILDGTDN-----------------FATRYLVNDAAVLAGK-PYVWGSI-YRFEG  170 (392)
T ss_pred             cCC-hhHHHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe-ccCEE
Confidence            554 34566778899999987521                 1112336677787776 6887655 33443

>PLN00203 glutamyl-tRNA reductase

Probab=96.45  E-value=0.0079  Score=55.86  Aligned_cols=75  Identities=23%  Similarity=0.243  Sum_probs=51.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.+++|+|.|+ |.+|+.+++.|...|. +|++++|+....  ..+....   ++....   ....+++..++.++|+||
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era--~~La~~~---~g~~i~---~~~~~dl~~al~~aDVVI  334 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERV--AALREEF---PDVEII---YKPLDEMLACAAEADVVF  334 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHH--HHHHHHh---CCCceE---eecHhhHHHHHhcCCEEE
Confidence            55789999998 9999999999999996 799999886642  2222210   112111   123345667788999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+.+.
T Consensus       335 sAT~s  339 (519)
T PLN00203        335 TSTSS  339 (519)
T ss_pred             EccCC
Confidence            87643

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.44  E-value=0.013  Score=50.31  Aligned_cols=69  Identities=16%  Similarity=0.158  Sum_probs=45.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC----CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD----YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |..|+|.++| +|.+|+++++.|+++|    ++|++.+|+..+. ...+...    .+++..       .+..++.+++|
T Consensus         1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~-~~~l~~~----~g~~~~-------~~~~e~~~~aD   67 (279)
T PRK07679          1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETR-LQELHQK----YGVKGT-------HNKKELLTDAN   67 (279)
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHH-HHHHHHh----cCceEe-------CCHHHHHhcCC
Confidence            3446899998 5999999999999988    7899888865321 1121110    122221       12334567889


Q ss_pred             eEEEec
Q 020924           79 GVFHIA   84 (319)
Q Consensus        79 ~vi~~a   84 (319)
                      +||-+.
T Consensus        68 vVilav   73 (279)
T PRK07679         68 ILFLAM   73 (279)
T ss_pred             EEEEEe
Confidence            999876

>PRK07877 hypothetical protein; Provisional

Probab=96.43  E-value=0.049  Score=52.63  Aligned_cols=104  Identities=13%  Similarity=0.167  Sum_probs=66.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChh----------------hHH-HHHhhhccCC--CeEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDE----------------KNA-RLYELEKASE--NLKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~----------------~~~-~~~~~~~~~~--~~~~~~~   62 (319)
                      ++.+|+|.|+ | +|++++..|+..|.  ++++++.+.-+.                +.. ..+.+....+  .++.+..
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            4678999999 7 99999999999984  777777541110                000 1111111223  4566666


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG  128 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~  128 (319)
                      .++ .+.+.++++++|+||.|.-         .        +..-..+-++|.+.++ .+|+-++.
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D---------~--------~~~R~~ln~~a~~~~i-P~i~~~~~  230 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECD---------S--------LDVKVLLREAARARRI-PVLMATSD  230 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEcCC
Confidence            665 6778888999999999862         1        1122345577777776 78876653

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.41  E-value=0.0091  Score=52.51  Aligned_cols=35  Identities=34%  Similarity=0.305  Sum_probs=31.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +|+|.|.|+ |-+|..++..|++.|++|++.+|+++
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~   38 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPE   38 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            468999977 99999999999999999999999755

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.39  E-value=0.0093  Score=54.21  Aligned_cols=35  Identities=20%  Similarity=0.289  Sum_probs=31.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |+|.|.|. |++|..++..|++.|++|++.++++..
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~   35 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEK   35 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHH
Confidence            36999976 999999999999999999999987664

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.39  E-value=0.022  Score=45.35  Aligned_cols=80  Identities=10%  Similarity=-0.002  Sum_probs=53.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC-hhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD-YDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~v   80 (319)
                      ++++|+|+|.|.+..+|+-++..|+++|..|++.+.+..-.   .     ....+.........| ...+.+.++++|+|
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~---~-----~~~~~~~hs~t~~~~~~~~l~~~~~~ADIV  130 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV---F-----TRGESIRHEKHHVTDEEAMTLDCLSQSDVV  130 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc---c-----ccccccccccccccchhhHHHHHhhhCCEE
Confidence            47899999999999999999999999999999886443210   0     000000011111112 12477788899999


Q ss_pred             EEecccCCC
Q 020924           81 FHIACPAPS   89 (319)
Q Consensus        81 i~~a~~~~~   89 (319)
                      |-.+|....
T Consensus       131 IsAvG~~~~  139 (197)
T cd01079         131 ITGVPSPNY  139 (197)
T ss_pred             EEccCCCCC
Confidence            998886543

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.38  E-value=0.0054  Score=52.84  Aligned_cols=36  Identities=22%  Similarity=0.129  Sum_probs=32.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      .++|.|.|+ |.+|+.++..|++.|++|++.++++..
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            368999987 999999999999999999999987653

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.38  E-value=0.015  Score=52.53  Aligned_cols=67  Identities=15%  Similarity=0.101  Sum_probs=48.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|+|. |.||+.+++.|...|.+|++.++++........       .++++     .   .+.++++++|+||.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-------~G~~v-----~---~l~eal~~aDVVI~  273 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-------DGFRV-----M---TMEEAAELGDIFVT  273 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-------cCCEe-----c---CHHHHHhCCCEEEE
Confidence            46789999997 999999999999999999999887653211110       12221     1   24566778999998


Q ss_pred             ecc
Q 020924           83 IAC   85 (319)
Q Consensus        83 ~a~   85 (319)
                      +.|
T Consensus       274 aTG  276 (425)
T PRK05476        274 ATG  276 (425)
T ss_pred             CCC
Confidence            754

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.37  E-value=0.014  Score=49.59  Aligned_cols=58  Identities=12%  Similarity=0.017  Sum_probs=47.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+|+|+|+|.+..+|+.++..|+++|..|++..+...                            .+.+..+++|+||
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~----------------------------~l~~~~~~ADIvi  207 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK----------------------------NLRHHVRNADLLV  207 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC----------------------------CHHHHHhhCCEEE
Confidence            467899999999999999999999999999998764322                            2566677888888


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      ..+|..
T Consensus       208 ~avG~p  213 (285)
T PRK10792        208 VAVGKP  213 (285)
T ss_pred             EcCCCc
Confidence            887754

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.36  E-value=0.045  Score=50.54  Aligned_cols=76  Identities=18%  Similarity=0.241  Sum_probs=50.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+++|+|.|. |..|.++++.|.+.|++|++.++++..........+..  .++.++.++-.     .+.+.++|.||..
T Consensus        13 ~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~--~gi~~~~~~~~-----~~~~~~~dlVV~S   84 (458)
T PRK01710         13 KNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKE--LGVKLVLGENY-----LDKLDGFDVIFKT   84 (458)
T ss_pred             cCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHh--CCCEEEeCCCC-----hHHhccCCEEEEC
Confidence            4678999987 88999999999999999999998654221111111211  24556554321     1224678999998


Q ss_pred             cccC
Q 020924           84 ACPA   87 (319)
Q Consensus        84 a~~~   87 (319)
                      .|..
T Consensus        85 pgi~   88 (458)
T PRK01710         85 PSMR   88 (458)
T ss_pred             CCCC
Confidence            7654

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.35  E-value=0.011  Score=40.11  Aligned_cols=33  Identities=27%  Similarity=0.281  Sum_probs=30.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +|+|.|| |++|-.++..|.+.|.+|+++.|++.
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccch
Confidence            5889988 99999999999999999999999865

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.34  E-value=0.053  Score=50.10  Aligned_cols=78  Identities=22%  Similarity=0.140  Sum_probs=53.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEeccc
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACP   86 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   86 (319)
                      +|+|.|+ |..|...++.|.++|++|.+.+++...........+..  .+++++.+.-.+.+.+...+.++|.||...|.
T Consensus         2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~--~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi   78 (459)
T PRK02705          2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQ--EGITVKLGKPLELESFQPWLDQPDLVVVSPGI   78 (459)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHH--cCCEEEECCccchhhhhHHhhcCCEEEECCCC
Confidence            6899987 88999999999999999999998755322111111221  25666655433444455567789999997765


Q ss_pred             C
Q 020924           87 A   87 (319)
Q Consensus        87 ~   87 (319)
                      .
T Consensus        79 ~   79 (459)
T PRK02705         79 P   79 (459)
T ss_pred             C
Confidence            4

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.33  E-value=0.021  Score=48.66  Aligned_cols=67  Identities=15%  Similarity=0.169  Sum_probs=45.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh---hhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY---DSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~d~vi   81 (319)
                      +++|+|.| .|.+|+.+++.|.++|+.|.+++++.+......-.            ..++.|.   .........+|+||
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~------------~lgv~d~~~~~~~~~~~~~aD~Vi   69 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAAL------------ELGVIDELTVAGLAEAAAEADLVI   69 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHh------------hcCcccccccchhhhhcccCCEEE
Confidence            45777776 69999999999999999998888887653222211            1244443   12244556789999


Q ss_pred             Eec
Q 020924           82 HIA   84 (319)
Q Consensus        82 ~~a   84 (319)
                      -+.
T Consensus        70 vav   72 (279)
T COG0287          70 VAV   72 (279)
T ss_pred             Eec
Confidence            875

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.32  E-value=0.016  Score=53.95  Aligned_cols=39  Identities=15%  Similarity=0.140  Sum_probs=33.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |.|. |+|.|+|+ |.+|+.++..|++.|++|++.++++..
T Consensus         1 ~~~i-~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~   39 (495)
T PRK07531          1 MTMI-MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEA   39 (495)
T ss_pred             CCCc-CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            4443 57999976 999999999999999999999997664

>PRK06153 hypothetical protein; Provisional

Probab=96.30  E-value=0.043  Score=48.55  Aligned_cols=103  Identities=18%  Similarity=0.194  Sum_probs=63.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcC----------C---C-h------hhHHHHH-hhhccCCCeEEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTARE----------P---S-D------EKNARLY-ELEKASENLKLFK   61 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~----------~---~-~------~~~~~~~-~~~~~~~~~~~~~   61 (319)
                      ++.+|+|.|+ |.+|++++..|++.|. ++++++.+          .   . +      .+.+.+. .+...+.++..+.
T Consensus       175 ~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~~~  253 (393)
T PRK06153        175 EGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVPHP  253 (393)
T ss_pred             hhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEEEe
Confidence            4578999988 9999999999999984 56666533          1   0 0      0111111 1111234566666


Q ss_pred             ccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           62 ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ..+ +.+.+. .+.++|+||.|...                 ..+-..+.++|.+.++ .+|.++-
T Consensus       254 ~~I-~~~n~~-~L~~~DiV~dcvDn-----------------~~aR~~ln~~a~~~gI-P~Id~G~  299 (393)
T PRK06153        254 EYI-DEDNVD-ELDGFTFVFVCVDK-----------------GSSRKLIVDYLEALGI-PFIDVGM  299 (393)
T ss_pred             ecC-CHHHHH-HhcCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-CEEEeee
Confidence            555 445444 56889999998631                 2223446677777776 5676554

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.30  E-value=0.015  Score=50.94  Aligned_cols=74  Identities=24%  Similarity=0.202  Sum_probs=47.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH----Hh-cCcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS----AI-VGCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~----~~-~~~d   78 (319)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.+  +...+.++     ++..+ .|..+.+.+.+    .. +++|
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~--~~~~~~~l-----Ga~~v-i~~~~~~~~~~~~~~~~~~gvd  209 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDE--KVAYLKKL-----GFDVA-FNYKTVKSLEETLKKASPDGYD  209 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHc-----CCCEE-EeccccccHHHHHHHhCCCCeE
Confidence            3578999999999999999888889999999887654  33333332     22221 22222222222    21 2589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      +++++.|
T Consensus       210 vv~d~~G  216 (325)
T TIGR02825       210 CYFDNVG  216 (325)
T ss_pred             EEEECCC
Confidence            9999875

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.28  E-value=0.02  Score=50.39  Aligned_cols=67  Identities=12%  Similarity=0.020  Sum_probs=49.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|+|.|.|- |.||+.+++.|...|.+|++.+|......   ...     .++        ...++.++++++|+|+.
T Consensus       148 L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~-----~~~--------~~~~l~ell~~aDiV~l  210 (333)
T PRK13243        148 VYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEA---EKE-----LGA--------EYRPLEELLRESDFVSL  210 (333)
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhh---HHH-----cCC--------EecCHHHHHhhCCEEEE
Confidence            56899999987 99999999999999999999988754311   000     011        12357778889999998


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      +...
T Consensus       211 ~lP~  214 (333)
T PRK13243        211 HVPL  214 (333)
T ss_pred             eCCC
Confidence            8743

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.27  E-value=0.079  Score=45.92  Aligned_cols=102  Identities=22%  Similarity=0.210  Sum_probs=62.3

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHHH-HHhhhccCC--CeEEEEccCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNAR-LYELEKASE--NLKLFKADLL   65 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~~~~~--~~~~~~~Dl~   65 (319)
                      +|||.|+ |.+|.++++.|+..|. ++++++.+.-+.                 +... .+.+....+  .++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899987 9999999999999994 577766442111                 0110 111111122  4555666776


Q ss_pred             ChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           66 DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +.....+.++++|+||.+..         .        ...-..+-+.|+..++ .+|..++
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D---------n--------~~ar~~in~~c~~~~i-p~I~~gt  123 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD---------N--------LAARRHVNKMCLAADV-PLIESGT  123 (312)
T ss_pred             CccchHHHHhcCCEEEECCC---------C--------HHHHHHHHHHHHHCCC-CEEEEec
Confidence            64434567788999998642         1        1223346677777776 6777665

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.25  E-value=0.014  Score=49.55  Aligned_cols=57  Identities=14%  Similarity=0.085  Sum_probs=46.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++|+|.|.++.+|+.++..|.++|..|++.....                            .++.+.++++|+||
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------------~~l~~~~~~ADIVV  206 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------------RDLAAHTRQADIVV  206 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------------CCHHHHhhhCCEEE
Confidence            36789999999999999999999999999998754221                            13556777889999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      -.+|.
T Consensus       207 ~avG~  211 (285)
T PRK14189        207 AAVGK  211 (285)
T ss_pred             EcCCC
Confidence            98874

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.25  E-value=0.019  Score=50.00  Aligned_cols=67  Identities=12%  Similarity=0.120  Sum_probs=51.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |++|.|.|| |.+|+=++.+-...|++|++++-+++.... ..        .-..+..+.+|.+++.++.+.+|+|-
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~-~v--------a~~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAA-QV--------ADRVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchh-hc--------ccceeecCCCCHHHHHHHHhhCCEEE
Confidence            468999998 999999999999999999999876654321 11        11445567778899999888888775

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.25  E-value=0.02  Score=51.51  Aligned_cols=68  Identities=18%  Similarity=0.138  Sum_probs=52.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a   84 (319)
                      +|+|.|+ |.+|..+++.+.+.|++|++++.++..... ..        --+.+..|..|.+.+.++++  ++|+|+-..
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~-~~--------ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAM-QV--------AHRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchh-hh--------CceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            5899996 999999999999999999999987653211 11        01445678889988888887  699888543

This enzyme is an alternative to PurN (TIGR00639)

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.23  E-value=0.0077  Score=55.65  Aligned_cols=37  Identities=22%  Similarity=0.174  Sum_probs=32.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +.+++++|+|+ |.+|++++..|.+.|++|++.+|+..
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~  366 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKA  366 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46789999996 89999999999999999999888754

>PRK06849 hypothetical protein; Provisional

Probab=96.23  E-value=0.0089  Score=53.94  Aligned_cols=39  Identities=23%  Similarity=0.100  Sum_probs=34.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+ ++|+|||||++..+|..+++.|.+.|++|++++.++.
T Consensus         1 ~~-~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          1 MN-TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CC-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            55 4689999999999999999999999999999988754

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.20  E-value=0.0059  Score=43.74  Aligned_cols=89  Identities=20%  Similarity=0.245  Sum_probs=56.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++|||+|| |-+|..-++.|++.|.+|++++... .    ..+      +.+++..-++      +..+++.+.||
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~-~----~~~------~~i~~~~~~~------~~~l~~~~lV~   65 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI-E----FSE------GLIQLIRREF------EEDLDGADLVF   65 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE-H----HHH------TSCEEEESS-------GGGCTTESEEE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch-h----hhh------hHHHHHhhhH------HHHHhhheEEE
Confidence            578999999999 9999999999999999999998764 1    111      3455554443      23366778777


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      -+.+        ++ .    .    ...+.+.|++.++  +|+++.
T Consensus        66 ~at~--------d~-~----~----n~~i~~~a~~~~i--~vn~~D   92 (103)
T PF13241_consen   66 AATD--------DP-E----L----NEAIYADARARGI--LVNVVD   92 (103)
T ss_dssp             E-SS---------H-H----H----HHHHHHHHHHTTS--EEEETT
T ss_pred             ecCC--------CH-H----H----HHHHHHHHhhCCE--EEEECC
Confidence            4321        11 1    1    2347777777764  677665

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.20  E-value=0.015  Score=49.50  Aligned_cols=59  Identities=15%  Similarity=0.144  Sum_probs=47.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++|+|.|.|.+|.+|+.++..|+++|+.|++.. +..                           ..+.+..+++|+||
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~-s~t---------------------------~~l~~~~~~ADIVI  206 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH-SRT---------------------------RNLAEVARKADILV  206 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC-CCC---------------------------CCHHHHHhhCCEEE
Confidence            36789999999999999999999999999998861 111                           03566777899999


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      -++|...
T Consensus       207 ~avg~~~  213 (284)
T PRK14179        207 VAIGRGH  213 (284)
T ss_pred             EecCccc
Confidence            9887543

>PRK07411 hypothetical protein; Validated

Probab=96.19  E-value=0.055  Score=48.73  Aligned_cols=104  Identities=14%  Similarity=0.074  Sum_probs=61.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hH-HHHHhhhccCC--CeEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KN-ARLYELEKASE--NLKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~-~~~~~~~~~~~--~~~~~~~   62 (319)
                      +..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-..                 +. ...+.+....+  +++.+..
T Consensus        37 ~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~  115 (390)
T PRK07411         37 KAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET  115 (390)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence            4578999988 8999999999999995 566665431110                 00 01111211223  3455555


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .++. +...+.+.++|+||.+...         ..        .-..+-++|.+.++ .+|+.+.
T Consensus       116 ~~~~-~~~~~~~~~~D~Vvd~~d~---------~~--------~r~~ln~~~~~~~~-p~v~~~~  161 (390)
T PRK07411        116 RLSS-ENALDILAPYDVVVDGTDN---------FP--------TRYLVNDACVLLNK-PNVYGSI  161 (390)
T ss_pred             ccCH-HhHHHHHhCCCEEEECCCC---------HH--------HHHHHHHHHHHcCC-CEEEEEE
Confidence            5543 4566778899999998531         11        12235567777775 6776544

>PLN02928 oxidoreductase family protein

Probab=96.19  E-value=0.024  Score=50.09  Aligned_cols=81  Identities=14%  Similarity=0.043  Sum_probs=52.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|++.|.|- |-||+.+++.|..-|.+|++.+|+........+. ++.  ..+.-+........++.+++.++|+|+.
T Consensus       157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~L~ell~~aDiVvl  232 (347)
T PLN02928        157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLL-IPN--GDVDDLVDEKGGHEDIYEFAGEADIVVL  232 (347)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhc-ccc--ccccccccccCcccCHHHHHhhCCEEEE
Confidence            56899999987 9999999999999999999998864321110000 000  0001111011134578899999999998


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +....
T Consensus       233 ~lPlt  237 (347)
T PLN02928        233 CCTLT  237 (347)
T ss_pred             CCCCC
Confidence            87543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.18  E-value=0.018  Score=55.17  Aligned_cols=71  Identities=24%  Similarity=0.285  Sum_probs=56.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      .+|+|.|. |-+|+.+++.|.++|+++++++.+++..  +.+.+     .+..++.+|.++++-++++ +++++.+|-+.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v--~~~~~-----~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHI--ETLRK-----FGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHH--HHHHh-----cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            57999987 9999999999999999999999876632  22222     3678899999999988864 45788888764

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.18  E-value=0.021  Score=48.27  Aligned_cols=104  Identities=22%  Similarity=0.161  Sum_probs=63.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~   82 (319)
                      .+.+|+|+||+|-+|+-+.+--.-+|++|+++.=.++  +...+.+..+....+.+...|+  .+.+.++ -+++|+.|.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~e--K~~~l~~~lGfD~~idyk~~d~--~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAE--KCDFLTEELGFDAGIDYKAEDF--AQALKEACPKGIDVYFE  225 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHH--HHHHHHHhcCCceeeecCcccH--HHHHHHHCCCCeEEEEE
Confidence            3689999999999999877655568999999986655  4444444222222222222211  1233332 247899999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-C-CCEEEEecccccccc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-K-VKRVIVVSSGVAVGL  133 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~-~~~iv~~SS~~~~~~  133 (319)
                      |.|-.                      +++++... + -.||+.++-++.|..
T Consensus       226 NVGg~----------------------v~DAv~~~ln~~aRi~~CG~IS~YN~  256 (340)
T COG2130         226 NVGGE----------------------VLDAVLPLLNLFARIPVCGAISQYNA  256 (340)
T ss_pred             cCCch----------------------HHHHHHHhhccccceeeeeehhhcCC
Confidence            98742                      44444433 2 248999888776653

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.16  E-value=0.012  Score=51.43  Aligned_cols=74  Identities=22%  Similarity=0.286  Sum_probs=58.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh-hHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD-SVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~vi~   82 (319)
                      +++||+.|+ ||+.+-+++.|.+++ .+|++.+|...+  .+.+.+    +..++.+..|+++.+ .++...+..|.++.
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~--~~~~~~----~~~~~av~ldv~~~~~~L~~~v~~~D~viS   74 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKD--AEALVK----GINIKAVSLDVADEELALRKEVKPLDLVIS   74 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHH--HHHHhc----CCCccceEEEccchHHHHHhhhcccceeee
Confidence            578999987 999999999998764 789988887663  223222    235888999999988 88888888898887


Q ss_pred             ecc
Q 020924           83 IAC   85 (319)
Q Consensus        83 ~a~   85 (319)
                      +.-
T Consensus        75 LlP   77 (445)
T KOG0172|consen   75 LLP   77 (445)
T ss_pred             ecc
Confidence            654

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.021  Score=48.55  Aligned_cols=59  Identities=12%  Similarity=0.115  Sum_probs=47.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++|+|+|.+..+|+.++..|.++|..|++......                            ++.+..+++|+||
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~----------------------------~l~~~~~~ADIvv  212 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD----------------------------DLKKYTLDADILV  212 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC----------------------------CHHHHHhhCCEEE
Confidence            367899999999999999999999999999988663221                            2455667889999


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      ..+|...
T Consensus       213 ~AvG~p~  219 (287)
T PRK14176        213 VATGVKH  219 (287)
T ss_pred             EccCCcc
Confidence            8887643

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.15  E-value=0.11  Score=42.59  Aligned_cols=105  Identities=19%  Similarity=0.291  Sum_probs=65.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh-----------------hhHHH-HHhhhccCCCeEEEEc-c
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD-----------------EKNAR-LYELEKASENLKLFKA-D   63 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------------~~~~~-~~~~~~~~~~~~~~~~-D   63 (319)
                      +..+|+|.|. |.+|++.++.|++.|. ++++++-+.-.                 .+.+. .+.+....|..++... |
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            3468999988 9999999999999984 45555532110                 00111 1222223455555443 4


Q ss_pred             CCChhhHHHHhc-CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           64 LLDYDSVKSAIV-GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        64 l~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      .-.++.+++++. ++|+||++.-                 |+..-..|+..|+++++ ++|  ||+.
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD-----------------~v~~Kv~Li~~c~~~ki-~vI--ss~G  154 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAID-----------------SVRAKVALIAYCRRNKI-PVI--SSMG  154 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchh-----------------hhHHHHHHHHHHHHcCC-CEE--eecc
Confidence            567777888776 5899999752                 12334568999998887 444  5533

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.025  Score=48.07  Aligned_cols=58  Identities=12%  Similarity=0.039  Sum_probs=46.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+|+|+|.|.+..+|+.++..|+++|..|++.....                            .++.+..+++|+||
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t----------------------------~~l~~~~~~ADIvV  205 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT----------------------------KDLSFYTQNADIVC  205 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc----------------------------HHHHHHHHhCCEEE
Confidence            36789999999999999999999999999998763211                            12456677889998


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      -.+|..
T Consensus       206 ~AvG~p  211 (285)
T PRK14191        206 VGVGKP  211 (285)
T ss_pred             EecCCC
Confidence            887654

>PLN02256 arogenate dehydrogenase

Probab=96.14  E-value=0.026  Score=48.91  Aligned_cols=36  Identities=19%  Similarity=0.293  Sum_probs=32.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      +++++|.|.| .|.+|+.++..|.+.|++|++.+|+.
T Consensus        34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~   69 (304)
T PLN02256         34 SRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSD   69 (304)
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECcc
Confidence            4568999999 59999999999999999999999875

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.14  E-value=0.027  Score=49.13  Aligned_cols=69  Identities=17%  Similarity=0.120  Sum_probs=48.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|++.|.|. |-||+++++.|..-|.+|++.++.........               -......++++++.++|+|+.
T Consensus       140 l~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~---------------~~~~~~~~Ld~lL~~sDiv~l  203 (324)
T COG0111         140 LAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV---------------DGVVGVDSLDELLAEADILTL  203 (324)
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhcc---------------ccceecccHHHHHhhCCEEEE
Confidence            45799999977 99999999999999999999998433211000               011223457778888888877


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      ..-.+
T Consensus       204 h~PlT  208 (324)
T COG0111         204 HLPLT  208 (324)
T ss_pred             cCCCC
Confidence            66443

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.14  E-value=0.013  Score=51.12  Aligned_cols=39  Identities=18%  Similarity=0.178  Sum_probs=33.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |+. .++|.|.|+ |.+|+.++..|++.|++|++.+++.+.
T Consensus         1 ~~~-~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130          1 MNP-IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             CCC-ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            663 468999987 999999999999999999999987653

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.13  E-value=0.035  Score=50.06  Aligned_cols=67  Identities=13%  Similarity=0.075  Sum_probs=47.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|.|+ |.||+.++..+...|.+|+++++++...  .....     .++..+     +   +++++.++|+||.
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~--~~A~~-----~G~~~~-----~---~~e~v~~aDVVI~  263 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICA--LQAAM-----EGYEVM-----T---MEEAVKEGDIFVT  263 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhH--HHHHh-----cCCEEc-----c---HHHHHcCCCEEEE
Confidence            45789999988 9999999999999999999988876532  11111     123222     1   2355678999999


Q ss_pred             ecc
Q 020924           83 IAC   85 (319)
Q Consensus        83 ~a~   85 (319)
                      ++|
T Consensus       264 atG  266 (413)
T cd00401         264 TTG  266 (413)
T ss_pred             CCC
Confidence            765

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.12  E-value=0.054  Score=47.90  Aligned_cols=73  Identities=12%  Similarity=0.120  Sum_probs=46.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Ccce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   79 (319)
                      .+.+|+|+|+ |.+|...++.+...|. +|++++++++  +....+++     ++..+ .|..+. ++.+..+   ++|+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~--~~~~a~~l-----Ga~~v-i~~~~~-~~~~~~~~~g~~D~  238 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPR--SLSLAREM-----GADKL-VNPQND-DLDHYKAEKGYFDV  238 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHH--HHHHHHHc-----CCcEE-ecCCcc-cHHHHhccCCCCCE
Confidence            4678999986 9999999988888897 6888887765  33333332     22222 233322 2333222   3899


Q ss_pred             EEEeccc
Q 020924           80 VFHIACP   86 (319)
Q Consensus        80 vi~~a~~   86 (319)
                      +|.++|.
T Consensus       239 vid~~G~  245 (343)
T PRK09880        239 SFEVSGH  245 (343)
T ss_pred             EEECCCC
Confidence            9998863

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.12  E-value=0.023  Score=49.15  Aligned_cols=64  Identities=17%  Similarity=0.141  Sum_probs=44.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      ++|.|.|. |.+|..++..|++.|++|++.+|+++..  ..+...     ++.       ...+..++++++|+||-+.
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~--~~~~~~-----g~~-------~~~s~~~~~~~aDvVi~~v   65 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAV--DALVDK-----GAT-------PAASPAQAAAGAEFVITML   65 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHH--HHHHHc-----CCc-------ccCCHHHHHhcCCEEEEec
Confidence            47999975 9999999999999999999999876632  222111     111       1123445667788888775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	319
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		2e-50
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		3e-47
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		2e-37
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		7e-15
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		6e-14
2x4g_A	342	Crystal Structure Of Pa4631, A Nucleoside-Diphospha		2e-08
3ay3_A	267	Crystal Structure Of Glucuronic Acid Dehydrogeanse		2e-05
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		2e-05
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		3e-05
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		3e-05
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		9e-05
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		2e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/329 (36%), Positives = 180/329 (54%), Gaps = 15/329 (4%)
Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKL 59
           M  + E VCVTGA GF+ SW+V  LL R Y V  T R+P++ K  + L +L KA  +L L
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTL 60
Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK- 118
           +KADL D  S   AI GC GVFH+A P    +  +P+ E+++P ++G L ++K+C  AK 
Sbjct: 61  WKADLADEGSFDEAIKGCTGVFHVATPMDFES-KDPENEVIKPTIEGMLGIMKSCAAAKT 119
Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT--TNNW-YCLSKTEAESEALEF 175
           V+R++  SS   V +     +  + DE+CWSD E+CR      W Y +SKT AE  A ++
Sbjct: 120 VRRLVFTSSAGTVNIQEH--QLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKY 177
Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR--MIVDVRDVXX 233
            K+  +D +TI P LV+GP + S +  S +  +  +  G E+  + +R    V + D+  
Sbjct: 178 AKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPIT-GNEAHYSIIRQGQFVHLDDLCN 236
Query: 234 XXXXXXXXXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSF---TEKEDEVMLTSEK 290
                       GRYIC++H     DL   L+  YP YN P  F    E    V  +S+K
Sbjct: 237 AHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKK 296
Query: 291 LQKLGWSYR-SLEETLVDSVESYKKVGIL 318
           L  LG+ ++ SLE+    +V++ +  G+L
Sbjct: 297 LTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  185 bits (470), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/332 (36%), Positives = 184/332 (55%), Gaps = 20/332 (6%)
Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKAD 63
           K+  CV G  GF+AS +VKLLL + Y V+ T R+P ++K  + L EL++  + LK+F+AD
Sbjct: 9   KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD-LKIFRAD 67
Query: 64  LLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRV 122
           L D  S ++ I GC+ VFH+A P    +  +P+ ++++PA++G +NV+KAC  AK VKRV
Sbjct: 68  LTDELSFEAPIAGCDFVFHVATPVHFAS-EDPENDMIKPAIQGVVNVMKACTRAKSVKRV 126
Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN--NW-YCLSKTEAESEALEFGKKT 179
           I+ SS  AV +N     G ++DE  W+D E+  +     W Y  SKT AE  A +F ++ 
Sbjct: 127 ILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN 186
Query: 180 GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR---------MIVDVRD 230
            +D++T+ P L+ G  L S V  SS+ L   L  G E L N ++          I  V D
Sbjct: 187 NIDLITVIPTLMAGSSLTSDV-PSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVED 245
Query: 231 VXXXXXXXXXXXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE--KEDEVMLTS 288
           V              GRYIC A      +L   L   YP Y  P  F +   + +++++S
Sbjct: 246 VCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISS 305
Query: 289 EKLQKLGWSYR-SLEETLVDSVESYKKVGILN 319
           EKL K G+S++  +EE   +SVE +K  G+L 
Sbjct: 306 EKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 14/325 (4%)
Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN--ARLYELEKASENLKLFKA 62
           K RVCVTG  GFL SW++K LL   Y V+ T R   + K   + L  L  ASE L  F A
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60
Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKR 121
           DL + DS  +AI GC G+FH A P     V  P+  + +  V G L ++KAC+ +K VKR
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHTASPI-DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKR 119
Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN--NW-YCLSKTEAESEALEFGKK 178
            I  SSG AV  N +     ++DE+ WSD +  R+     W Y +SKT AE   LEFG++
Sbjct: 120 FIYTSSGSAVSFNGK--DKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ 177
Query: 179 TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVXXXXXXX 238
            G+DVVT+    ++G  +  K+  S    + L+    E +      +V V DV       
Sbjct: 178 NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL 237
Query: 239 XXXXXXXGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVM----LTSEKLQKL 294
                  GRY C+  ++   ++   L + YP Y        KE +      L ++KL   
Sbjct: 238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDA 297
Query: 295 GWSYR-SLEETLVDSVESYKKVGIL 318
           G+ ++ ++E+   D+++  K+ G L
Sbjct: 298 GFDFKYTIEDMFDDAIQCCKEKGYL 322

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 141/335 (42%), Gaps = 32/335 (9%)
Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKA 62
           E   V VTGA GF+AS VV+ LL   Y V GTAR  S   N  + ++ +           
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69
Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKR 121
           D+L   +    I G  GV HIA      +  N   E++ PA+ GTLN ++A      VKR
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHIAS---VVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKR 126
Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWS----DKEYCRTTNN-----W-YCLSKTEAESE 171
            ++ SS V+  +     +G  +DE  W+    DK      ++     W Y  SKTEAE  
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 172 ALEF--GKKTGLDVVTICPNLVLGPLLQSKVNTSSLV-LIKLLKEGYESLENKL---RMI 225
           A +F    K    +  + PN  +G +   +  + S    +  L  G  S    L   +  
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246
Query: 226 VDVRDVXXXXXXXXXXXXXXGRYI-CTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV 284
           V   D+               R +  TA       ++   + LYP+  +P  F ++  ++
Sbjct: 247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL 306
Query: 285 --MLTSEKLQKL------GWSYRSLEETLVDSVES 311
               T+  L+ L      GW  RS+EE++ D V S
Sbjct: 307 SKFDTAPSLEILKSLGRPGW--RSIEESIKDLVGS 339

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 139/335 (41%), Gaps = 32/335 (9%)
Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKA 62
           E   V VTGA GF+AS VV+ LL   Y V GTAR  S   N  + ++ +           
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69
Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKR 121
           D L   +    I G  GV HIA      +  N   E++ PA+ GTLN ++A      VKR
Sbjct: 70  DXLKQGAYDEVIKGAAGVAHIAS---VVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKR 126
Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWS----DKEYCRTTNN-----W-YCLSKTEAESE 171
            ++ SS V+  +     +G  +DE  W+    DK      ++     W Y  SKTEAE  
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 172 ALEFG--KKTGLDVVTICPNLVLGPLLQSKVN-TSSLVLIKLLKEGYESLENKL---RMI 225
           A +F    K    +  + PN  +G +   +    S+      L  G  S    L   +  
Sbjct: 187 AWKFXDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWXXSLFNGEVSPALALXPPQYY 246
Query: 226 VDVRDVXXXXXXXXXXXXXXGRYI-CTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV 284
           V   D+               R +  TA       ++   + LYP+  +P  F ++  ++
Sbjct: 247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL 306
Query: 285 --MLTSEKLQKL------GWSYRSLEETLVDSVES 311
               T+  L+ L      GW  RS+EE++ D V S
Sbjct: 307 SKFDTAPSLEILKSLGRPGW--RSIEESIKDLVGS 339

>pdb|2X4G|A Chain A, Crystal Structure Of Pa4631, A Nucleoside-Diphosphate-Sugar Epimerase From Pseudomonas Aeruginosa Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 12/207 (5%)
Query: 62  ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR 121
           A++LD+  ++ A+ G +GV   A   PS   P    E +  A+  T     ACL+A+V R
Sbjct: 63  AEMLDHAGLERALRGLDGVIFSAGYYPSR--PRRWQEEVASALGQTNPFYAACLQARVPR 120
Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGL 181
           ++ V S  A+   PR P+G    E  + D     +  + Y L K   + +A E   + GL
Sbjct: 121 ILYVGSAYAM---PRHPQGLPGHEGLFYDS--LPSGKSSYVLCKWALDEQAREQ-ARNGL 174
Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-YESLENKLRMIVDVRDVXXXXXXXXX 240
            VV   P +VLG L    +  ++  +I  +  G         R ++D  +          
Sbjct: 175 PVVIGIPGMVLGEL---DIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALE 231
Query: 241 XXXXXGRYICTAHMIRARDLVDKLKSL 267
                 RY+ T H +   DL  ++  L
Sbjct: 232 RGRIGERYLLTGHNLEMADLTRRIAEL 258

>pdb|3AY3|A Chain A, Crystal Structure Of Glucuronic Acid Dehydrogeanse From Chromohalobacter Salexigens Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 23/180 (12%)
Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R+ VTGA G + S +   L +  + V          + + + +L  A  + ++   DL D
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEV----------RLSDIVDLGAAEAHEEIVACDLAD 53
Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
             +V   +  C+G+ H+       +V  P  ++L+  + G  N+ +A       R++  S
Sbjct: 54  AQAVHDLVKDCDGIIHLG----GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109
Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S   +G  PR         T   D E  R  ++ Y LSK   E  A  +  K  ++ + I
Sbjct: 110 SNHTIGYYPR---------TTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNI 160

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 28/195 (14%)
Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-----------KNARLYELEKASE 55
           R+ VTG  GF+ S  V+ LL+  Y        P+DE             A L  ++ A  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAY-----PDVPADEVIVLDSLTYAGNRANLAPVD-ADP 55
Query: 56  NLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACL 115
            L+    D+ D   +   + G + + H A  +             E  V+GT  +++  +
Sbjct: 56  RLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAV 115
Query: 116 EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEF 175
           +A V RV+ VS+    G          +D   W++       N+ Y  SK  ++  A  +
Sbjct: 116 DAGVGRVVHVSTNQVYG---------SIDSGSWTESSPLE-PNSPYAASKAGSDLVARAY 165
Query: 176 GKKTGLDV-VTICPN 189
            +  GLDV +T C N
Sbjct: 166 HRTYGLDVRITRCCN 180

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 45/330 (13%)
Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R  +TG  GF+  ++   L  ++  V GT+R       A+L        N+++   D++D
Sbjct: 14  RALITGVAGFVGKYLANHLTEQNVEVFGTSR----NNEAKL-------PNVEMISLDIMD 62
Query: 67  YDSVKSAI--VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVI 123
              VK  I  +  + +FH+A  +        +       V GTL+V+ A  ++ +  R++
Sbjct: 63  SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 122
Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
            + S    G+        I+ E     +E      + Y +SK      A ++ K  G+D+
Sbjct: 123 TIGSSEEYGM--------ILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDI 174
Query: 184 V------TICPNLVLGPLLQSKVNTSSLVLIKLLKE----GYESLENKLRMIVDVRDVXX 233
           +       I P   LG + Q       +V I++ K+       +LE  +R   DVRD+  
Sbjct: 175 IHTRTFNHIGPGQSLGFVTQD--FAKQIVDIEMEKQEPIIKVGNLE-AVRDFTDVRDIVQ 231
Query: 234 XXXXXXXXXXXXGRY-ICTAHMIRARDLVDKLKSLYPNYNY-----PKSFTEKEDEVMLT 287
                         Y +C+    R +D++D L ++  N        P      E   ++ 
Sbjct: 232 AYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAM-ANVKIDTELNPLQLRPSEVPTLIG 290
Query: 288 SEKLQK--LGWSYR-SLEETLVDSVESYKK 314
           S K  K   GW  R  LE++L + ++SY++
Sbjct: 291 SNKRLKDSTGWKPRIPLEKSLFEILQSYRQ 320

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 28/195 (14%)
Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-----------KNARLYELEKASE 55
           R+ VTG  GF+ S  V+ LL+  Y        P+DE             A L  ++ A  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAY-----PDVPADEVIVLDSLTYAGNRANLAPVD-ADP 55
Query: 56  NLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACL 115
            L+    D+ D   +   + G + + H A  +             E  V+GT  +++  +
Sbjct: 56  RLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAV 115
Query: 116 EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEF 175
           +A V RV+ VS+    G          +D   W++       N+ Y  SK  ++  A  +
Sbjct: 116 DAGVGRVVHVSTDEVYG---------SIDSGSWTESSPLE-PNSPYAASKAGSDLVARAY 165
Query: 176 GKKTGLDV-VTICPN 189
            +  GLDV +T C N
Sbjct: 166 HRTYGLDVRITRCCN 180

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN----ARLYELEKASENLKLFKADLL 65
           +TG  GF+ S +++ LL  D  V G     +  +      R    EK   N K  + D+ 
Sbjct: 32  ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIR 91
Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           + D   +A  G + V H A         N  +      + G LN++ A  +AKV+     
Sbjct: 92  NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYA 151
Query: 126 SSGVAVGLNPRWPK 139
           +S    G +P  PK
Sbjct: 152 ASSSTYGDHPGLPK 165

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV VTG  GF+ S +V+ LL+R         E +   N    + E   + +  F+ DL D
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGL-------EVAVLDNLATGKRENVPKGVPFFRVDLRD 54
Query: 67  YDSVKSAI--VGCNGVFHIACPAP-STTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
            + V+ A        V H A  A    +V +P ++  E  + G LN+++AC +  V++++
Sbjct: 55  KEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLD-FEVNLLGGLNLLEACRQYGVEKLV 113
Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
             S+G A+      P+G+  +ET W  +       + Y  SK   E     +G+  GL  
Sbjct: 114 FASTGGAI--YGEVPEGERAEET-WPPR-----PKSPYAASKAAFEHYLSVYGQSYGLKW 165
Query: 184 VTICPNLVLGP 194
           V++    V GP
Sbjct: 166 VSLRYGNVYGP 176

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-151
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-149
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-149
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-116
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	6e-79
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-71
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-29
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-29
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-25
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-25
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-23
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-22
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	7e-22
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	1e-20
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-19
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-19
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-18
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-18
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	5e-18
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	6e-18
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-17
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	3e-17
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	3e-17
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-17
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	6e-17
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	9e-17
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	8e-16
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-15
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-15
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	9e-15
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-14
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	4e-14
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	5e-14
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	6e-14
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	6e-13
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-12
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	4e-12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	7e-12
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	7e-12
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	2e-11
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-11
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	6e-11
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	1e-10
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	5e-10
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	7e-10
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-09
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-09
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	1e-09
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	3e-09
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	5e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	7e-08
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	9e-08
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-07
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-07
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	5e-07
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-06
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	5e-06
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-05
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-05
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-05
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	4e-04
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	5e-04
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-04

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  427 bits (1100), Expect = e-151
 Identities = 120/328 (36%), Positives = 183/328 (55%), Gaps = 13/328 (3%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKL 59
           M  + E VCVTGA GF+ SW+V  LL R Y V  T R+P++ +K   L +L KA  +L L
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK- 118
           +KADL D  S   AI GC GVFH+A P       +P+ E+++P ++G L ++K+C  AK 
Sbjct: 61  WKADLADEGSFDEAIKGCTGVFHVATPMD-FESKDPENEVIKPTIEGMLGIMKSCAAAKT 119

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT---TNNWYCLSKTEAESEALEF 175
           V+R++  SS   V  N +  +  + DE+CWSD E+CR    T   Y +SKT AE  A ++
Sbjct: 120 VRRLVFTSSAGTV--NIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKY 177

Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM-IVDVRDVAEA 234
            K+  +D +TI P LV+GP + S +  S +  +  +           +   V + D+  A
Sbjct: 178 AKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNA 237

Query: 235 LLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE---VMLTSEKL 291
            +  +E  +AEGRYIC++H     DL   L+  YP YN P  F   ++    V  +S+KL
Sbjct: 238 HIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKL 297

Query: 292 QKLGWSYR-SLEETLVDSVESYKKVGIL 318
             LG+ ++ SLE+    +V++ +  G+L
Sbjct: 298 TDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  422 bits (1087), Expect = e-149
 Identities = 110/325 (33%), Positives = 166/325 (51%), Gaps = 14/325 (4%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD--EKNARLYELEKASENLKLFKA 62
           K RVCVTG  GFL SW++K LL   Y V+ T R   +     + L  L  ASE L  F A
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKR 121
           DL + DS  +AI GC G+FH A P     V  P+  + +  V G L ++KAC+ +K VKR
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHTASPID-FAVSEPEEIVTKRTVDGALGILKACVNSKTVKR 119

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW---YCLSKTEAESEALEFGKK 178
            I  SSG AV  +       ++DE+ WSD +  R+   +   Y +SKT AE   LEFG++
Sbjct: 120 FIYTSSGSAV--SFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ 177

Query: 179 TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLA 238
            G+DVVT+    ++G  +  K+  S    + L+    E +      +V V DVA A +  
Sbjct: 178 NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL 237

Query: 239 YEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE----VMLTSEKLQKL 294
            E +   GRY C+  ++   ++   L + YP Y        KE +      L ++KL   
Sbjct: 238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDA 297

Query: 295 GWSYR-SLEETLVDSVESYKKVGIL 318
           G+ ++ ++E+   D+++  K+ G L
Sbjct: 298 GFDFKYTIEDMFDDAIQCCKEKGYL 322

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  420 bits (1083), Expect = e-149
 Identities = 123/332 (37%), Positives = 186/332 (56%), Gaps = 20/332 (6%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKASENLKLFKA 62
            K+  CV G  GF+AS +VKLLL + Y V+ T R+P ++K    L EL++  + LK+F+A
Sbjct: 8   GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD-LKIFRA 66

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKR 121
           DL D  S ++ I GC+ VFH+A P       +P+ ++++PA++G +NV+KAC  AK VKR
Sbjct: 67  DLTDELSFEAPIAGCDFVFHVATPVHF-ASEDPENDMIKPAIQGVVNVMKACTRAKSVKR 125

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN---WYCLSKTEAESEALEFGKK 178
           VI+ SS  AV +N     G ++DE  W+D E+  +       Y  SKT AE  A +F ++
Sbjct: 126 VILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE 185

Query: 179 TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM---------IVDVR 229
             +D++T+ P L+ G  L S V +S  + + L+  G E L N ++          I  V 
Sbjct: 186 NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLIT-GNEFLINGMKGMQMLSGSVSIAHVE 244

Query: 230 DVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDE--VMLT 287
           DV  A +   EK  A GRYIC A      +L   L   YP Y  P  F +   +  ++++
Sbjct: 245 DVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIIS 304

Query: 288 SEKLQKLGWSYR-SLEETLVDSVESYKKVGIL 318
           SEKL K G+S++  +EE   +SVE +K  G+L
Sbjct: 305 SEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  339 bits (871), Expect = e-116
 Identities = 87/335 (25%), Positives = 138/335 (41%), Gaps = 28/335 (8%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKLFKA 62
           E   V VTGA GF+AS VV+ LL   Y V GTAR  S      + ++ +           
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKR 121
           D+L   +    I G  GV HIA      +  N   E++ PA+ GTLN ++A      VKR
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHIASV---VSFSNKYDEVVTPAIGGTLNALRAAAATPSVKR 126

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN----------WYCLSKTEAESE 171
            ++ SS V+  +     +G  +DE  W+ +   +               Y  SKTEAE  
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186

Query: 172 ALEFGK--KTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYESLENKLRM--I 225
           A +F    K    +  + PN  +G +   +    ++S  ++ L           +     
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246

Query: 226 VDVRDVAEALLLAYEKAEAEG-RYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV 284
           V   D+    L      + E  R   TA       ++   + LYP+  +P  F ++  ++
Sbjct: 247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL 306

Query: 285 M-----LTSEKLQKLG-WSYRSLEETLVDSVESYK 313
                  + E L+ LG   +RS+EE++ D V S  
Sbjct: 307 SKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  242 bits (621), Expect = 6e-79
 Identities = 73/344 (21%), Positives = 133/344 (38%), Gaps = 48/344 (13%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           +  V GA G L     + + +  + +    R  S  +     E E          A++LD
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE-------CRVAEMLD 67

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
           +  ++ A+ G +GV   A      + P    E +  A+  T     ACL+A+V R++ V 
Sbjct: 68  HAGLERALRGLDGVIFSA--GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVG 125

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S  A+    R P+G    E  + D     +  + Y L K   + +A E  +  GL VV  
Sbjct: 126 SAYAMP---RHPQGLPGHEGLFYD--SLPSGKSSYVLCKWALDEQAREQARN-GLPVVIG 179

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
            P +VLG L      T+  V+  +            R ++D  +    LL+A E+     
Sbjct: 180 IPGMVLGELDIG--PTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGE 237

Query: 247 RYICTAHMIRARDLVDKLKSLY---PNYNYPKS--------------FTEKEDEV----- 284
           RY+ T H +   DL  ++  L           +               + +   +     
Sbjct: 238 RYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAI 297

Query: 285 -MLT------SEKLQK-LGW-SYRSLEETLVDSVESYKKVGILN 319
            ++         K ++ LG+ S  +L++TL+ +++ ++  G  N
Sbjct: 298 EVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFN 341

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  218 bits (558), Expect = 6e-71
 Identities = 42/251 (16%), Positives = 88/251 (35%), Gaps = 33/251 (13%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
           + +++ + GA GF+ S ++   L+R + V    R P          ++  +E+LK+ KAD
Sbjct: 3   KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK--------IKIENEHLKVKKAD 54

Query: 64  LLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
           +   D V     G + V     P  +        ++ +  +K  L ++    +A V R +
Sbjct: 55  VSSLDEVCEVCKGADAVISAFNPGWNNP------DIYDETIKVYLTIIDGVKKAGVNRFL 108

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
           +V    ++ + P                +      N     K   E       K+  +D 
Sbjct: 109 MVGGAGSLFIAPGLR-----------LMDSGEVPENILPGVKALGEFYLNFLMKEKEIDW 157

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE 243
           V   P   + P +++            L +    ++      + V D A A++   E  +
Sbjct: 158 VFFSPAADMRPGVRTGRY--------RLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK 209

Query: 244 AEGRYICTAHM 254
                    ++
Sbjct: 210 HHQERFTIGYL 220

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  112 bits (282), Expect = 2e-29
 Identities = 41/189 (21%), Positives = 72/189 (38%), Gaps = 23/189 (12%)

Query: 6   ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
            R+ VTGA G + S +   L +  + V  +                 A  + ++   DL 
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLG----------AAEAHEEIVACDLA 52

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           D  +V   +  C+G+ H+     S  V  P  ++L+  + G  N+ +A       R++  
Sbjct: 53  DAQAVHDLVKDCDGIIHLG--GVS--VERPWNDILQANIIGAYNLYEAARNLGKPRIVFA 108

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVT 185
           SS   +G  PR  +   +D       E  R  ++ Y LSK   E  A  +  K  ++ + 
Sbjct: 109 SSNHTIGYYPRTTR---IDT------EVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLN 159

Query: 186 ICPNLVLGP 194
           I        
Sbjct: 160 IRIGSCFPK 168

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  111 bits (280), Expect = 4e-29
 Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 23/180 (12%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R+ VTGA G L   + + L      +      P          L+ A  N +  + DL D
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSP----------LDPAGPNEECVQCDLAD 54

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
            ++V + + GC+G+ H+     S  V  P  ++L+  + G  N+ +A       R++  S
Sbjct: 55  ANAVNAMVAGCDGIVHLG--GIS--VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFAS 110

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S   +G  P+  +   +        +     +  Y +SK   E+ A  +  K G +   +
Sbjct: 111 SNHTIGYYPQTER---LGP------DVPARPDGLYGVSKCFGENLARMYFDKFGQETALV 161

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  103 bits (258), Expect = 1e-25
 Identities = 62/329 (18%), Positives = 130/329 (39%), Gaps = 45/329 (13%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           + VTG+ G + + +V  L  +    +  A             +++ +  +K    D+ + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA----------SDIVQRDTGGIKFITLDVSNR 51

Query: 68  DSVKSAIV--GCNGVFHIACPAPSTTVPNPQ--MELLEPAVKGTLNVVKACLEAKVKRVI 123
           D +  A+     + +FH+A    +    +P    ++    + GT N+++A  + +V++V+
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
           + S+    G     PK ++   T              + ++K  AE     + +K GLDV
Sbjct: 109 IPSTIGVFGPET--PKNKVPSITIT-------RPRTMFGVTKIAAELLGQYYYEKFGLDV 159

Query: 184 VTI-CPNLVLGPLLQSKVNTSSLVLI--KLLKEG----YESLENKLRMIVDVRDVAEALL 236
            ++  P ++      +   T   V I    +K      Y +    L M+  + D  +AL+
Sbjct: 160 RSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMM-YMPDALKALV 218

Query: 237 LAYEKAEAEGR----YICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKED------EVML 286
             YE    +      Y  TA+     +L  K+K   P +        ++       E + 
Sbjct: 219 DLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLD 278

Query: 287 TSEKLQKLGWSYR-SLEETLVDSVESYKK 314
           +SE   + G+S    L+ T+ D ++   +
Sbjct: 279 SSEASNEWGFSIEYDLDRTIDDMIDHISE 307

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score =  100 bits (249), Expect = 3e-25
 Identities = 29/241 (12%), Positives = 72/241 (29%), Gaps = 36/241 (14%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ + GA G   S +++   +R + V    R            + +  +++ + + D+ D
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK--------ITQTHKDINILQKDIFD 53

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
                  +   N V      +P            E  V    +++         R++VV 
Sbjct: 54  LTLS--DLSDQNVVVDAYGISPDEA---------EKHVTSLDHLISVLNGTVSPRLLVVG 102

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
              ++ ++       +++     +  Y  T           A+        +       I
Sbjct: 103 GAASLQIDE--DGNTLLESKGLREAPYYPTARAQ-------AKQLEHLKSHQAEFSWTYI 153

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
            P+ +  P       T        + + +    +     + + D A A+L   E+     
Sbjct: 154 SPSAMFEP----GERTGDYQ----IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLN 205

Query: 247 R 247
            
Sbjct: 206 E 206

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 92.8 bits (231), Expect = 9e-23
 Identities = 33/242 (13%), Positives = 66/242 (27%), Gaps = 50/242 (20%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ + GA G      +   +   Y V    R+ S           +      +   D+L 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-------SEGPRPAHVVVGDVLQ 57

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
              V   + G + V  +       +      E       G  N+V A     V +V+  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGTRNDLSPTTVMSE-------GARNIVAAMKAHGVDKVVACT 110

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S   +    + P                                + L   +++GL  V +
Sbjct: 111 SAFLLWDPTKVP-----------------PRLQAVTDDHIRMH-KVL---RESGLKYVAV 149

Query: 187 CPN-LVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE 245
            P  +   PL  +           +  +G          ++   D+   +L      E +
Sbjct: 150 MPPHIGDQPLTGA---------YTVTLDG-----RGPSRVISKHDLGHFMLRCLTTDEYD 195

Query: 246 GR 247
           G 
Sbjct: 196 GH 197

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 91.6 bits (228), Expect = 3e-22
 Identities = 38/243 (15%), Positives = 86/243 (35%), Gaps = 53/243 (21%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL-L 65
           ++ + G+ G +   ++K L + DY ++  AR+                 N+K    D+  
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ---------VPQYNNVKAVHFDVDW 52

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
             + +   + G + + +++     +         L+  + G + +++A  +A+VKR I++
Sbjct: 53  TPEEMAKQLHGMDAIINVSGSGGKSL--------LKVDLYGAVKLMQAAEKAEVKRFILL 104

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVT 185
           S+ +      +W                       Y ++K  A+   L   K+T LD   
Sbjct: 105 ST-IFSLQPEKWIGAGFDALK-------------DYYIAKHFAD-LYLT--KETNLDYTI 147

Query: 186 ICP-NLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA 244
           I P  L                       G   + +++     + DVA+ +        +
Sbjct: 148 IQPGALTEEE-----------------ATGLIDINDEVSASNTIGDVADTIKELVMTDHS 190

Query: 245 EGR 247
            G+
Sbjct: 191 IGK 193

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 92.6 bits (231), Expect = 7e-22
 Identities = 46/328 (14%), Positives = 106/328 (32%), Gaps = 58/328 (17%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ VTG  GFL  +VV+ + +                        KA  + +   +D   
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIIL-----TRSIGN-----KAINDYEYRVSDYTL 53

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPA--VKGTLNVVKACLEAKVKRVIV 124
            D +   +   + V H+A              + E       T N+  AC E  +  ++ 
Sbjct: 54  EDLIN-QLNDVDAVVHLAATR---GSQGK---ISEFHDNEILTQNLYDACYENNISNIVY 106

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVV 184
            S+  A       P     +E            +  Y +SK   E     + +K GL + 
Sbjct: 107 ASTISAYSDETSLPW----NEKELPL------PDLMYGVSKLACEHIGNIYSRKKGLCIK 156

Query: 185 TI-CPNLVLGPLLQSKVNTSSLV--LIKLLKEGYESLE-----NKLRMIVDVRDVAEALL 236
            +   + + G         + ++    +    G E L         R  +  +D A++++
Sbjct: 157 NLRFAH-LYGF----NEKNNYMINRFFRQAFHG-EQLTLHANSVAKREFLYAKDAAKSVI 210

Query: 237 LAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLY-----PNYNYPKSFTEKEDEVMLTS-- 288
            A ++ +  G + I +   +   ++ + + + +          P       + +  +   
Sbjct: 211 YALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNP----NANEGIHSSYMD 266

Query: 289 -EKLQK-LGWSYR-SLEETLVDSVESYK 313
             K ++ L +S   +    + +     +
Sbjct: 267 SSKAKELLDFSTDYNFATAVEEIHLLMR 294

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 90.0 bits (224), Expect = 1e-20
 Identities = 66/343 (19%), Positives = 123/343 (35%), Gaps = 45/343 (13%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASE 55
           +  + +   +TG  GF+ S +++ LL  D  V G     T  + +     R    EK   
Sbjct: 23  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRN-LDEVRSLVSEKQWS 81

Query: 56  NLKLFKADLLDYDSVKSAIVGCNGVFHIACPA---PSTTVPNPQMELLEPAVKGTLNVVK 112
           N K  + D+ + D   +A  G + V H A       S  + +P +      + G LN++ 
Sbjct: 82  NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRS--INDP-ITSNATNIDGFLNMLI 138

Query: 113 ACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEA 172
           A  +AKV+     +S    G +P  PK +       S           Y ++K   E  A
Sbjct: 139 AARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSP----------YAVTKYVNELYA 188

Query: 173 LEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVL---IKLLKEGYESLE-----NKLRM 224
             F +  G   + +    V G   Q      + V+      + +G + +         R 
Sbjct: 189 DVFSRCYGFSTIGLRYFNVFGR-RQDPNGAYAAVIPKWTSSMIQG-DDVYINGDGETSRD 246

Query: 225 IVDVRDVAEALLLAYEK-AEAEGR-Y-ICTAHMIRARDLVDKLKSLY----PNYNYPKSF 277
              + +  +A LLA     +A  + Y I          L   L+        +Y+    +
Sbjct: 247 FCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY 306

Query: 278 TEKED-EVMLTS---EKLQK-LGWSYR-SLEETLVDSVESYKK 314
            +  + +V  +     K  K LG++ +  +   +  ++  Y  
Sbjct: 307 RDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 349

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 85.7 bits (212), Expect = 1e-19
 Identities = 49/259 (18%), Positives = 79/259 (30%), Gaps = 54/259 (20%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
              V VTGA G     V K L      +   G  R           ++   ++   +F  
Sbjct: 4   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ-----GKEKIGGEAD---VFIG 55

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVK-------------GTLN 109
           D+ D DS+  A  G + +  +    P         +   P                G  N
Sbjct: 56  DITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 115

Query: 110 VVKACLEAKVKRVIVVSS-GVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEA 168
            + A   A VK ++VV S G     +P    G                      + K +A
Sbjct: 116 QIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGN-----------------ILVWKRKA 158

Query: 169 ESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV 228
           E + L     +G     I    +L      +          L+ +  E L+   + +   
Sbjct: 159 E-QYL---ADSGTPYTIIRAGGLLDKEGGVRE--------LLVGKDDELLQTDTKTV-PR 205

Query: 229 RDVAEALLLAYEKAEAEGR 247
            DVAE  + A    EA+ +
Sbjct: 206 ADVAEVCIQALLFEEAKNK 224

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 83.9 bits (208), Expect = 4e-19
 Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 47/241 (19%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV V GA G +A +++  L ++ +      R    E+   L    +      +  A+L  
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE--EQGPEL----RERGASDIVVANLE- 75

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
            +    A    + V   A   P T      +  L     G +  ++   +  +KR I+VS
Sbjct: 76  -EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLW----GAIKTIQEAEKRGIKRFIMVS 130

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S V      + P                      Y ++K  A+ + L   K++ LD   +
Sbjct: 131 S-VGTVDPDQGPMN-----------------MRHYLVAKRLAD-DEL---KRSSLDYTIV 168

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
            P       L ++ +T  + +     E   S        +   DVA+ +    ++    G
Sbjct: 169 RP-----GPLSNEESTGKVTVSPHFSEITRS--------ITRHDVAKVIAELVDQQHTIG 215

Query: 247 R 247
           +
Sbjct: 216 K 216

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 83.5 bits (207), Expect = 2e-18
 Identities = 67/342 (19%), Positives = 114/342 (33%), Gaps = 53/342 (15%)

Query: 7   RVCVTGAGGFLASWVVKLLLSR--------DYFVHGTAREPSDEKNARLYELEKASENLK 58
            V V G  GF+ S +VK LL          D  +        D    R  E         
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSE--------- 84

Query: 59  LFKADLLDYDSVKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEA 117
                + D   + S     + VFH+A      +++ +P +   E     TL + +     
Sbjct: 85  ---TSITDDALLASLQDEYDYVFHLATYHGNQSSIHDP-LADHENNTLTTLKLYERLKHF 140

Query: 118 K-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFG 176
           K +K+V+  ++G ++              T  +D       ++ Y +SK   E  ++ + 
Sbjct: 141 KRLKKVVYSAAGCSIAEKTFDDA----KATEETDIVSLHNNDSPYSMSKIFGEFYSVYYH 196

Query: 177 KKTGLDVVTI-CPNLVLGP--------LLQSKVNTSSLVL---IKLLKEGYESLE----- 219
           K+  L  V     N V GP           +       V    I    +G   L      
Sbjct: 197 KQHQLPTVRARFQN-VYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKG-MPLPLENGG 254

Query: 220 NKLRMIVDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFT 278
              R  + V DVA  L+         G Y I +       DL  K+  +  N        
Sbjct: 255 VATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLP 314

Query: 279 EKEDEVMLTS----EKLQK-LGWSYR-SLEETLVDSVESYKK 314
           ++  +         EK ++ LG+S   S+++ L  ++E  K 
Sbjct: 315 KRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKA 356

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 83.2 bits (205), Expect = 3e-18
 Identities = 45/275 (16%), Positives = 82/275 (29%), Gaps = 34/275 (12%)

Query: 10  VTGAGGFLASWVVKLLLSRDYF-----VHGTAREPSDEKNARLYELEKASENLKLFKADL 64
           + G  G + + + ++L   D       V+G AR      +            +   + D+
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHED--------NPINYVQCDI 57

Query: 65  LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE--AKVKRV 122
            D D  ++ +     V H+            Q E  E   K   NV+ A +     +K +
Sbjct: 58  SDPDDSQAKLSPLTDVTHVF-YVTWANRSTEQ-ENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALE-FGKKTGL 181
             + +G    + P    G+I         E        Y     + E   LE   KK GL
Sbjct: 116 -SLQTGRKHYMGPFESYGKIESHDPPYT-EDLPRLK--YMNFYYDLEDIMLEEVEKKEGL 171

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE----------NKLRMIVDVRDV 231
                 P  + G    S +N    + +      +E             +      D   +
Sbjct: 172 TWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI 231

Query: 232 AEALLLAYEKAEAEGRY--ICTAHMIRARDLVDKL 264
           AE  + A     A+     +    + + +     L
Sbjct: 232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVL 266

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 82.3 bits (204), Expect = 5e-18
 Identities = 29/147 (19%), Positives = 57/147 (38%), Gaps = 12/147 (8%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASE 55
           +    +   +TG  GF+ S +++ LL  +  V G     T  + +     +     +   
Sbjct: 21  LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYN-LDEVKTLVSTEQWS 79

Query: 56  NLKLFKADLLDYDSVKSAIVGCNGVFHIACPA---PSTTVPNPQMELLEPAVKGTLNVVK 112
                + D+ D  + +  + G + V H A       S  + +P +      + G LN++ 
Sbjct: 80  RFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRS--IVDP-ITTNATNITGFLNILH 136

Query: 113 ACLEAKVKRVIVVSSGVAVGLNPRWPK 139
           A   A+V+     +S    G +P  PK
Sbjct: 137 AAKNAQVQSFTYAASSSTYGDHPALPK 163

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 80.1 bits (197), Expect = 6e-18
 Identities = 28/243 (11%), Positives = 61/243 (25%), Gaps = 34/243 (13%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ V GA G   S +V     R + V    R+P                   +       
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK---------AADRLGATVATLVKEP 52

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
               ++ +   + V         +             +    ++V     +    V ++ 
Sbjct: 53  LVLTEADLDSVDAVVDALSVPWGS-------GRGYLHLDFATHLVSLLRNSDTLAVFILG 105

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S          P      E+  S   Y      +Y     +  +          ++ + I
Sbjct: 106 SASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA---------NVNWIGI 156

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
            P+        +        L+         +    +  +   ++A A+L   E   A  
Sbjct: 157 SPSEAFPSGPATSYVAGKDTLL---------VGEDGQSHITTGNMALAILDQLEHPTAIR 207

Query: 247 RYI 249
             I
Sbjct: 208 DRI 210

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 78.7 bits (194), Expect = 3e-17
 Identities = 44/242 (18%), Positives = 78/242 (32%), Gaps = 51/242 (21%)

Query: 7   RVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
            V + GAGG +A  V+  L  +        AR+P+          +    N ++   D+L
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-------KPYPTNSQIIMGDVL 77

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           ++ ++K A+ G + V+                   E       +V+ A     VKR+I V
Sbjct: 78  NHAALKQAMQGQDIVYANLTG--------------EDLDIQANSVIAAMKACDVKRLIFV 123

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVT 185
            S   +G+    P             E+              A  +A+   + +GL+   
Sbjct: 124 LS---LGIYDEVPGKF---------VEWNNAVIGEPLKPFRRAA-DAI---EASGLEYTI 167

Query: 186 ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE 245
           + P  +    +     TS     K               IV  + VA  +    +K E  
Sbjct: 168 LRPAWLTDEDIIDYELTSRNEPFK-------------GTIVSRKSVAALITDIIDKPEKH 214

Query: 246 GR 247
             
Sbjct: 215 IG 216

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 60/343 (17%), Positives = 106/343 (30%), Gaps = 62/343 (18%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSR--------DYFVHGTAREPSDEKNARLYELEKAS 54
           +E   + VTG  GF+ S +VK L  +        D    GT        N     L   +
Sbjct: 44  IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-----KFVN-----LVDLN 93

Query: 55  ENLKLFKADLLDYDSVKSAIVGCNGVFHI-ACPAPSTTVPNPQMELLEPAVKGTLNVVKA 113
               + K D L              +FH  AC + +       M+      + +  ++  
Sbjct: 94  IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDN---NYQYSKELLHY 150

Query: 114 CLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEAL 173
           CLE ++  +   S+    G                 +        N +  SK   +    
Sbjct: 151 CLEREIPFLYASSAAT-YGGRTSDFI----------ESREYEKPLNVFGYSKFLFDEYVR 199

Query: 174 EFGKKTGLDVVTICPNL----VLGPLLQSKVNTSSLV--LIKLLKEG-----YESLENKL 222
           +   +    +V          V GP    K + +S+   L   L  G     +E  EN  
Sbjct: 200 QILPEANSQIVG----FRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK 255

Query: 223 RMIVDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYN-----YPKS 276
           R  V V DVA+  L   E     G + + T      + + D   + +         +P  
Sbjct: 256 RDFVYVGDVADVNLWFLEN-GVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDK 314

Query: 277 FTEKEDEVMLT---SEKLQKLGWSY--RSLEETLVDSVESYKK 314
              K      T      L+  G+    +++ E + + +    +
Sbjct: 315 L--KGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR 355

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 79.9 bits (198), Expect = 3e-17
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 48/194 (24%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASENLKLFK 61
           R+ +TG  GF+   + + L++    V              E   +  E            
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPV--------- 59

Query: 62  ADLLDYDSVKSAIVGCNGVFHIACPA--------PSTTVPNPQMELLEPAVKGTLNVVKA 113
                 +  +  +     V+H+A           P   + N         V    +++  
Sbjct: 60  -----LELEERDLSDVRLVYHLASHKSVPRSFKQPLDYLDN---------VDSGRHLLAL 105

Query: 114 CLEAKVKRVIVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEA 172
           C    V +V+V S+   V G     P      E               Y  SK   E  A
Sbjct: 106 CTSVGVPKVVVGSTC-EVYGQADTLPT----PEDSPLSPRSP------YAASKVGLEMVA 154

Query: 173 LEFGKKTGLDVVTI 186
               + +    V I
Sbjct: 155 GAHQRASVAPEVGI 168

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 79.6 bits (197), Expect = 4e-17
 Identities = 68/322 (21%), Positives = 115/322 (35%), Gaps = 35/322 (10%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           +V +TG  G + S + +LLL R   V G      +    R   L K   NL   +  + D
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVGI----DNFATGRREHL-KDHPNLTFVEGSIAD 77

Query: 67  YDSVKSAIVGCN--GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
           +  V   I       V H A    S   P+           G  NVV+A  +  V R + 
Sbjct: 78  HALVNQLIGDLQPDAVVHTAA---SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVY 134

Query: 125 VSSGVAVGLNPRW-PKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
             + +  G+ P   P                   N+ Y +SK+  E     + + +GLD 
Sbjct: 135 FQTALCYGVKPIQQPV----RLD-----HPRNPANSSYAISKSANED----YLEYSGLDF 181

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE 243
           VT     V+GP   S      +   +L +     +    R  V V+D+A A + A +   
Sbjct: 182 VTFRLANVVGPRNVSGP--LPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGV- 238

Query: 244 AEGRY-ICTAHMIRARDLVDKLKSLY-PNYNYPKSFTEK-EDEVMLT---SEKLQK-LGW 296
             G Y   +   +  ++L D +               E   D+         +  +  G 
Sbjct: 239 GHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGK 298

Query: 297 S-YRSLEETLVDSVESYKKVGI 317
             +  L+ET+  +V  +++ G+
Sbjct: 299 IEFTPLKETVAAAVAYFREYGV 320

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 79.3 bits (196), Expect = 6e-17
 Identities = 54/324 (16%), Positives = 109/324 (33%), Gaps = 24/324 (7%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
           E  ++ +TGAGGF+AS + + L    ++V  +     D K       +   +   L   D
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIAS-----DWKKNEHMTEDMFCDEFHL--VD 80

Query: 64  LLDYDSVKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           L   ++      G + VF++A        + +    ++      + N+++A     +KR 
Sbjct: 81  LRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRF 140

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
              SS        +            SD  +     + + L K   E     + K  G++
Sbjct: 141 FYASSACIYPEFKQLETTN--VSLKESD-AWPAEPQDAFGLEKLATEELCKHYNKDFGIE 197

Query: 183 VVTICPNLVLGPLLQSKVNTSSLV--LIKLLKEGYESLE-----NKLRMIVDVRDVAEAL 235
                 + + GP    K           +  +   +  E      + R    + +  E +
Sbjct: 198 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV 257

Query: 236 LLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVML----TSEKL 291
           L   +    E   I +  M+   ++ + + S       P       + V       +   
Sbjct: 258 LRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF-EEKKLPIHHIPGPEGVRGRNSDNNLIK 316

Query: 292 QKLGWSYR-SLEETLVDSVESYKK 314
           +KLGW+    L+E L  +    K+
Sbjct: 317 EKLGWAPNMRLKEGLRITYFWIKE 340

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 78.3 bits (194), Expect = 9e-17
 Identities = 69/333 (20%), Positives = 115/333 (34%), Gaps = 59/333 (17%)

Query: 7   RVCVTGAGGFLASWVVKLLLSR------DYFVHGTAREPSDEKNARLYELEKASENLKLF 60
            + VTG  GF+ S VV  L         D    G                E  +E  +L 
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNE--------------EFVNEAARLV 48

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPA---PSTTVPNPQMELLEPAVKGTLNVVKACLEA 117
           KADL   D +K  + G   V+HIA           P    E+    V  T  +++A  +A
Sbjct: 49  KADLAADD-IKDYLKGAEEVWHIAANPDVRIGAENP---DEIYRNNVLATYRLLEAMRKA 104

Query: 118 KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK 177
            V R++  S+    G     P      E            +  Y  SK   E+    +  
Sbjct: 105 GVSRIVFTSTSTVYGEAKVIPT----PED-----YPTHPISL-YGASKLACEALIESYCH 154

Query: 178 KTGLDVVTICP-NLVLGPLLQSKVNTSSLV-LIKLLKEGYESLE-----NKLRMIVDVRD 230
              +        N V+G     +     +   I  LK   E LE      + +  + + D
Sbjct: 155 TFDMQAWIYRFAN-VIGR----RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISD 209

Query: 231 VAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKE-------D 282
             +A+L      E    + I +   I+ + + + +       +    FT  +        
Sbjct: 210 CVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEEL-GLSPRFRFTGGDRGWKGDVP 268

Query: 283 EVMLTSEKLQKLGWSYR-SLEETLVDSVESYKK 314
            ++L+ EKL++LGW  R + EE +  +V    +
Sbjct: 269 VMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVE 301

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 75.7 bits (187), Expect = 8e-16
 Identities = 73/339 (21%), Positives = 115/339 (33%), Gaps = 63/339 (18%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASENLKLFK 61
           R+ VTG  GF+ S +V  L+   Y V       + R      +A L+             
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHV------------ 49

Query: 62  ADLLDYDSVKSAIVGCNGVFHIACPA---PSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
            DL DY     A +  + VFH A       STT P   +      V  T NV++   +  
Sbjct: 50  RDLKDYSWG--AGIKGDVVFHFAANPEVRLSTTEP---IVHFNENVVATFNVLEWARQTG 104

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK 178
           V+ V+  SS    G     P      E      E  +  +  Y  +K   E     + + 
Sbjct: 105 VRTVVFASSSTVYGDADVIPT----PEE-----EPYKPISV-YGAAKAAGEVMCATYARL 154

Query: 179 TGLDVVTICP-NLVLGPLLQSKVNTSSLVLIKLLKEGYESLE-----NKLRMIVDVRDVA 232
            G+  + +   N V+GP L+  V      ++KL +     LE      + +  + VRD  
Sbjct: 155 FGVRCLAVRYAN-VVGPRLRHGV--IYDFIMKLRRNP-NVLEVLGDGTQRKSYLYVRDAV 210

Query: 233 EALLLAYEKAEAEGRY-----ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV--- 284
           EA L A++K E          +     +R  D+   +  +               +    
Sbjct: 211 EATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVL-GLRPEIRLVPSTPDGRGW 269

Query: 285 -------MLTSEKLQK-LGWS-YRSLEETLVDSVESYKK 314
                   L   KL K  GW    +  E +  + E   K
Sbjct: 270 PGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAK 308

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 75.6 bits (186), Expect = 1e-15
 Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 17/145 (11%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           MA +K+ + V GA G   + ++++  +  + V              L    +A  N+ LF
Sbjct: 1   MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL----QAIPNVTLF 56

Query: 61  KADLLDY-DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
           +  LL+    + +   G +  F         T      E     +    ++  A   A  
Sbjct: 57  QGPLLNNVPLMDTLFEGAHLAFIN-------TTSQAGDE-----IAIGKDLADAAKRAGT 104

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMD 144
            +  + SS     L   WP   +  
Sbjct: 105 IQHYIYSSMPDHSLYGPWPAVPMWA 129

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 74.5 bits (184), Expect = 2e-15
 Identities = 63/339 (18%), Positives = 108/339 (31%), Gaps = 64/339 (18%)

Query: 8   VCVTGAGGFLASWVVKLLLSR--------DYFVHGTAREPSDEKNARLYELEKASENLKL 59
           + VTG  GF+ S +VK L  +        D    GT          +   L   +    +
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT----------KFVNLVDLNIADYM 51

Query: 60  FKADLLDYDSVKSAIVGCNGVFHI-ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
            K D L              +FH  AC + +       M+      + +  ++  CLE +
Sbjct: 52  DKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDN---NYQYSKELLHYCLERE 108

Query: 119 VKRVIVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK 177
           +   +  SS  A  G                  +EY +  N  Y  SK   +    +   
Sbjct: 109 IP-FLYASSA-ATYGGRTSDFI---------ESREYEKPLNV-YGYSKFLFDEYVRQILP 156

Query: 178 KTGLDVVTICPNL----VLGPLLQSKVNTSSLV--LIKLLKEG-----YESLENKLRMIV 226
           +    +V          V GP    K + +S+   L   L  G     +E  EN  R  V
Sbjct: 157 EANSQIVG----FRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV 212

Query: 227 DVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYN-----YPKSFTEK 280
            V DVA+  L   E     G + + T      + + D   + +         +P     K
Sbjct: 213 YVGDVADVNLWFLEN-GVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--K 269

Query: 281 EDEVMLT---SEKLQKLGWSY--RSLEETLVDSVESYKK 314
                 T      L+  G+    +++ E + + +    +
Sbjct: 270 GRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR 308

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 72.4 bits (178), Expect = 9e-15
 Identities = 45/261 (17%), Positives = 80/261 (30%), Gaps = 55/261 (21%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKL 59
           M  +K+ V V G  G     V + LL    F V    R P  +    L       +  ++
Sbjct: 2   MV-DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKEL-----RLQGAEV 55

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
            + D  D   ++ A+ G    F +      T       +  E  VK    +        +
Sbjct: 56  VQGDQDDQVIMELALNGAYATFIV------TNYWESCSQEQE--VKQGKLLADLARRLGL 107

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT 179
              +V S    +    +   G                    +   K E E    E+ +  
Sbjct: 108 HY-VVYSGLENIK---KLTAG---------------RLAAAHFDGKGEVE----EYFRDI 144

Query: 180 GLDVVTICP-----NLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAE- 233
           G+ + ++       NL+   L Q   +  S +L     +        +  +  V D+   
Sbjct: 145 GVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDV------PMDGM-SVSDLGPV 197

Query: 234 --ALLLAYEKAEAEGRYICTA 252
             +LL   EK    G+ I  +
Sbjct: 198 VLSLLKMPEK--YVGQNIGLS 216

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 45/332 (13%), Positives = 106/332 (31%), Gaps = 46/332 (13%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSR---DYFVHGTAREPSDEKNARLYELEKASENLKLFK 61
             ++ + GA G + + + + L      +  +       SD +      +     +     
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTENVI------ASDIRKLNTDVVN----SGPFEV 51

Query: 62  ADLLDYDSVKSAIV--GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
            + LD++ ++  +       ++ +A    +T   NP     +  +    +V+      K+
Sbjct: 52  VNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAW-DLNMNSLFHVLNLAKAKKI 110

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT-NNWYCLSKTEAESEALEFGKK 178
           K++   SS    G                   +Y     +  Y +SK   E     +   
Sbjct: 111 KKIFWPSSIAVFGPTTPKEN----------TPQYTIMEPSTVYGISKQAGERWCEYYHNI 160

Query: 179 TGLDVVTI-CPNLVLGPLLQSKVNTSSLVLI---KLLKEGYESLENKLRMIVD---VRDV 231
            G+DV +I  P  ++         T+   +    K + +            +    + D 
Sbjct: 161 YGVDVRSIRYPG-LISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDA 219

Query: 232 AEALLLAYEKAEAEGR----YICTAHMIRARDLVDKLKSLYPNY--NYPKSFTEKEDEVM 285
            +A +   +    + +    Y   A      ++ +++K   P +   Y   F +K  +  
Sbjct: 220 IDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSW 279

Query: 286 LTS---EKLQK-LGWSYR-SLEETLVDSVESY 312
             S    + ++   W +   LE    D +E  
Sbjct: 280 PASIDDSQAREDWDWKHTFDLESMTKDMIEHL 311

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 69.3 bits (169), Expect = 4e-14
 Identities = 32/240 (13%), Positives = 69/240 (28%), Gaps = 48/240 (20%)

Query: 7   RVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
            + + GA G +A  +   LL+  D  +    R+        + +     E + + +    
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIID----HERVTVIEGSFQ 62

Query: 66  DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
           +   ++ A+     VF          + +              ++VKA     ++RVI V
Sbjct: 63  NPGXLEQAVTNAEVVF-------VGAMESGS---------DMASIVKALSRXNIRRVIGV 106

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVT 185
           S     G  P   +    D                Y   + +A        +++ L+   
Sbjct: 107 SMAGLSGEFPVALEKWTFD-----------NLPISYVQGERQAR----NVLRESNLNYTI 151

Query: 186 ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE 245
           +        L      T   ++ +  +             V    V +A+      A+  
Sbjct: 152 LRL----TWLYNDPEXTDYELIPEGAQFNDAQ--------VSREAVVKAIFDILHAADET 199

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 71.1 bits (174), Expect = 5e-14
 Identities = 46/321 (14%), Positives = 92/321 (28%), Gaps = 67/321 (20%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
            + +TGA GF+   +   L S                   ++E+ + +            
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHH--------------IFEVHRQT-----------K 36

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
            + ++SA++  + + H+A         + + E     V    +V+        K  I++S
Sbjct: 37  EEELESALLKADFIVHLAGVN---RPEHDK-EFSLGNVSYLDHVLDILTRNTKKPAILLS 92

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           S +                            +N Y  SK + E    E+ ++ G  V   
Sbjct: 93  SSIQATQ------------------------DNPYGESKLQGEQLLREYAEEYGNTVYIY 128

Query: 187 -CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD---VRDVAEALLLAYEKA 242
             PN + G   +   N+        +    E   N   + +    V D+   +  A E  
Sbjct: 129 RWPN-LFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT 187

Query: 243 EAEGRYIC---TAHMIRARDLVDKLKSL---YPNYNYPK---SFTEKEDEVMLTSEKLQK 293
                 +        +   ++VD L        +   PK    F +      L+      
Sbjct: 188 PTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTD 247

Query: 294 LGWSYRSLEETLVDSVESYKK 314
             +      +      E  K 
Sbjct: 248 FSYPLLMNVDDRGSFTEFIKT 268

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 70.2 bits (173), Expect = 6e-14
 Identities = 78/342 (22%), Positives = 127/342 (37%), Gaps = 68/342 (19%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASENLKLFK 61
           RV VTG  GF+ S +V+ LL+R   V       T +  +  K    +             
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFR------------ 49

Query: 62  ADLLDYDSVKSAIVGCN--GVFHIACPAPSTTVPNPQMELLEPA------VKGTLNVVKA 113
            DL D + V+ A        V H A  A   +V    +E  +P       + G LN+++A
Sbjct: 50  VDLRDKEGVERAFREFRPTHVSHQA--A-QASVKV-SVE--DPVLDFEVNLLGGLNLLEA 103

Query: 114 CLEAKVKRVIVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEA 172
           C +  V++++  S+G A+ G  P   +    +ET        R  +  Y  SK   E   
Sbjct: 104 CRQYGVEKLVFASTGGAIYGEVPEGER---AEET-----WPPRPKSP-YAASKAAFEHYL 154

Query: 173 LEFGKKTGLDVVTICPNL----VLGPLLQSKVNTS--SLVLIKLLK--------EGYESL 218
             +G+  GL  V+    L    V GP           ++   ++LK              
Sbjct: 155 SVYGQSYGLKWVS----LRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGD 210

Query: 219 ENKLRMIVDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSF 277
           E  +R  V V DVAEA  LA      EG Y + T      R+++  +             
Sbjct: 211 EGCVRDYVYVGDVAEAHALALFS--LEGIYNVGTGEGHTTREVLMAVAEAA-GKAPEVQP 267

Query: 278 TEKE----DEVMLTSEKLQKLGWSYR-SLEETLVDSVESYKK 314
                   +  +L+  KL   GW  +   +E +  +V+ ++ 
Sbjct: 268 APPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRG 309

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 66.4 bits (162), Expect = 6e-13
 Identities = 38/248 (15%), Positives = 69/248 (27%), Gaps = 48/248 (19%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYF--VHGTAREPSDEKNARLYELEKASENLKLFKADL 64
            V + GA G     ++K +L +  F  V    R                 +N+     D 
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-------KNVNQEVVDF 72

Query: 65  LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPA-VKGTLNVVKACLEAKVKRVI 123
              D   SA  G +  F        TT      E          L   +       K   
Sbjct: 73  EKLDDYASAFQGHDVGFCCLG----TTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFN 128

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
           ++SS  A             D++      Y +         K E E   +   ++   D 
Sbjct: 129 LLSSKGA-------------DKSSNFL--YLQV--------KGEVE-AKV---EELKFDR 161

Query: 184 VTIC-PNLVLGPLLQSKVNTSSL-VLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK 241
            ++  P ++L    +S+     +      L + +         +  V  V  A+L    +
Sbjct: 162 YSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWA----SGHSV-PVVTVVRAMLNNVVR 216

Query: 242 AEAEGRYI 249
              +   +
Sbjct: 217 PRDKQMEL 224

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 64/341 (18%), Positives = 114/341 (33%), Gaps = 54/341 (15%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSR---------DYFVHGTAREPSDEKNARLYELEKA 53
           LE + + +TG  GF+ S +                D F   T    +   +   ++    
Sbjct: 8   LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFK-NLI 66

Query: 54  SENLKLFKADLLDYDSVKSAI-VGCNGVFHI-ACPAPSTTVPNPQMELLEPAVKGTLNVV 111
               ++  AD+ +   ++    +  + +FH  A     TT+ N +  +++   +  LN++
Sbjct: 67  GFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAV--SDTTMLNQE-LVMKTNYQAFLNLL 123

Query: 112 KACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESE 171
           +     K K VI  SS    G N + P     +E+            N Y  SK   +  
Sbjct: 124 EIARSKKAK-VIYASSAGVYG-NTKAPNVVGKNESP----------ENVYGFSKLCMDEF 171

Query: 172 ALEFGKKTGLDVVTICPNL----VLGPLLQSKVNTSSLV--LIKLLKEGYESLE-----N 220
            L          V     L    V GP    K  T+S+V  L        + ++      
Sbjct: 172 VLSHSN--DNVQVG----LRYFNVYGPREFYKEKTASMVLQLALGAMAF-KEVKLFEFGE 224

Query: 221 KLRMIVDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFTE 279
           +LR  V + DV +A + A + A+  G Y +  +      ++V  LK              
Sbjct: 225 QLRDFVYIEDVIQANVKAMK-AQKSGVYNVGYSQARSYNEIVSILKEHL-GDFKVTYIKN 282

Query: 280 KED-EVMLTS---EKLQK-LGWS-YRSLEETLVDSVESYKK 314
                   T    E     L ++    LE  + D +     
Sbjct: 283 PYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHA 323

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 47/343 (13%), Positives = 105/343 (30%), Gaps = 51/343 (14%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP--SDEKNARLYELEKASENLK 58
           +  +   + + GA G +   + + L+           +    D    +       S  + 
Sbjct: 10  LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID--VFQPEAPAGFSGAVD 67

Query: 59  LFKADLLDYDSVKSAI-VGCNGVFHIACPAPSTTVPNPQMELLEPA----VKGTLNVVKA 113
              ADL      +  +    + +FH+A         +             + GT  +  A
Sbjct: 68  ARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDK-----GYRINLDGTRYLFDA 122

Query: 114 CLEAKVKRV----IVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEA 168
              A  K      +V +S +AV G    +P   I DE       +     + Y   K   
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLPYP---IPDEF------HTTPLTS-YGTQKAIC 172

Query: 169 ESEALEFGKKTGLDVVTI-CPNLVLGPLLQSKVNTS--SLVLIKLLKEG----YESLENK 221
           E    ++ ++   D + I  P + + P   +   +   S +L + L             +
Sbjct: 173 ELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232

Query: 222 LRMIVD---VRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFT 278
                    V  +    ++  EK                 + ++ L+ +           
Sbjct: 233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGE-KAVALIR 291

Query: 279 EKEDEVM----------LTSEKLQKLGWSYR-SLEETLVDSVE 310
            + +E++            +++ ++LG++   S EE +   +E
Sbjct: 292 REPNEMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIE 334

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 64.8 bits (158), Expect = 7e-12
 Identities = 56/371 (15%), Positives = 103/371 (27%), Gaps = 70/371 (18%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHG----TAREPSDEKNA-----------RLYELE 51
           RV V G  G+        L  ++Y V        R    +              R+   +
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 52  KAS-ENLKLFKADLLDYDSVKSAIVGCN--GVFHIA--CPAP-STTVPNPQMELLEPAVK 105
             + ++++L+  D+ D++ +  +        V H      AP S    +  +      V 
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 132

Query: 106 GTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIM---DETCWSDKE-YCRTTNNWY 161
           GTLNV+ A  E   +  +V    +     P     +          +D   Y +  +++Y
Sbjct: 133 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 192

Query: 162 CLSKTEAESEALEFGKKTGLDVVTI-CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN 220
            LSK           K  G+    +     V G           L         + +  N
Sbjct: 193 HLSKVHDSHNIAFTCKAWGIRATDLNQGV-VYGVKTDETEMHEELRNRLDYDAVFGTALN 251

Query: 221 KLRMI---------------------VDVRDVAEALLLAYEKAEAEGRY----------- 248
             R                       +D+RD  + + +A       G +           
Sbjct: 252 --RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 309

Query: 249 ---ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVML-TSEKLQKLGWS-YRSLEE 303
              + +           KL         P    E E+        KL +LG   +   + 
Sbjct: 310 VNELASL----VTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDS 365

Query: 304 TLVDSVESYKK 314
            L   +    +
Sbjct: 366 LLDSLLNFAVQ 376

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 64.4 bits (157), Expect = 7e-12
 Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
            +++ ++V + G  GF+   + K +L    +         D +  RL +L K  E +  F
Sbjct: 20  GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGM----DMQTDRLGDLVK-HERMHFF 74

Query: 61  KADL-LDYDSVKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
           + D+ ++ + V+  +  C+ +  +   A P+T V  P + + E   +  L +V++ ++  
Sbjct: 75  EGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQP-LRVFELDFEANLPIVRSAVKYG 133

Query: 119 VKRVIVVSS 127
            K ++  S+
Sbjct: 134 -KHLVFPST 141

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 52/202 (25%)

Query: 7   RVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADL- 64
           RV + G  GF+ + + + LL    Y V+G      D  +  +        +    + D+ 
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGL-----DIGSDAISRF-LNHPHFHFVEGDIS 55

Query: 65  LDYDSVKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
           +  + ++  +  C+ V  +   A P     NP + + E   +  L +++ C++ + KR+I
Sbjct: 56  IHSEWIEYHVKKCDVVLPLVAIATPIEYTRNP-LRVFELDFEENLRIIRYCVKYR-KRII 113

Query: 124 VVS-----------------SGVAVG--LNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS 164
             S                 S + VG    PRW    I                     S
Sbjct: 114 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRW----IYSV------------------S 151

Query: 165 KTEAESEALEFGKKTGLDVVTI 186
           K   +     +G+K GL     
Sbjct: 152 KQLLDRVIWAYGEKEGLQFTLF 173

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 58/337 (17%), Positives = 111/337 (32%), Gaps = 39/337 (11%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV VTG  GF   W+   L +    V G +       +  L+E  + ++ ++    D+ D
Sbjct: 11  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS--LFETARVADGMQSEIGDIRD 68

Query: 67  YDSVKSAIVGCN--GVFHIAC-PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
            + +  +I       VFH+A  P    +   P +E     V GT+ +++A       + +
Sbjct: 69  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGGVKAV 127

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
           V  +      N  W  G   +E             + Y  SK  AE     +        
Sbjct: 128 VNITSDKCYDNKEWIWGYRENEAMGG--------YDPYSNSKGCAELVTSSYRNSFFNPA 179

Query: 184 VTICPNLVLGPLLQ-SKVNTSSLVLIKLLKEGYESLENK----LRMIVDVR------DVA 232
                   +  +   + +      L +++ +   + E      +R    +R      +  
Sbjct: 180 NYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL 239

Query: 233 EALLLAYEKAEAEGRYICTA--------HMIRARDLVDKLKSLYP-NYNYPKSFTEKEDE 283
              LL  +K   +G                   +++V+++   +    ++         E
Sbjct: 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHE 299

Query: 284 V---MLTSEKLQK-LGWSYR-SLEETLVDSVESYKKV 315
                L   K +  LGW  R +L  TL   V  +K  
Sbjct: 300 AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW 336

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 17/126 (13%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL 64
             ++ + G G  L   + + L ++ + V G  R             +     ++   AD+
Sbjct: 3   LSKILIAGCG-DLGLELARRLTAQGHEVTGLRRSA-----------QPMPAGVQTLIADV 50

Query: 65  LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
              D++ S +     +      A   +  + ++  +E    G  N + A   A ++ V  
Sbjct: 51  TRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVE----GLRNTLSALEGAPLQHVFF 106

Query: 125 VSS-GV 129
           VSS GV
Sbjct: 107 VSSTGV 112

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 37/206 (17%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASE 55
           M  +++R+ +TG  GF+ S +   L+   + V       T R                  
Sbjct: 23  MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR----------------KR 66

Query: 56  NLKLFKAD----LLDYDSVKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNV 110
           N++ +       L+++D V+   +  + ++H+A PA P   + NP ++ L+    GTLN+
Sbjct: 67  NVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNP-IKTLKTNTIGTLNM 125

Query: 111 VKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL--SKTEA 168
           +         R+++ S+    G     P      E  W    +        C    K  A
Sbjct: 126 LGLAKRVG-ARLLLASTSEVYGDPEVHP----QSEDYWG---HVNPIGPRACYDEGKRVA 177

Query: 169 ESEALEFGKKTGLDVVTICPNLVLGP 194
           E+    + K+ G++V         GP
Sbjct: 178 ETMCYAYMKQEGVEVRVARIFNTFGP 203

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 50/253 (19%), Positives = 82/253 (32%), Gaps = 54/253 (21%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYF--VHGTAREPSDEKNARLYELEKASENLK 58
           M    +RV + GA G     ++  +LS      V   AR+        L E  +    + 
Sbjct: 1   MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA-------LAEHPRLDNPVG 53

Query: 59  LFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
                L   D        C G                    ++      L V K  LE  
Sbjct: 54  PLAELLPQLDGSIDTAFCCLGTTI------KEAGSEEAFRAVD--FDLPLAVGKRALEMG 105

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK 178
            +  +VVS   A+G + +            S   Y R         K E E +AL   ++
Sbjct: 106 ARHYLVVS---ALGADAK------------SSIFYNRV--------KGELE-QAL---QE 138

Query: 179 TGLDVVTIC-PNLVLGPLLQSKVNTSSLVLI-KLLKEGYESLENKLRMIVDVRDVAEALL 236
            G   +TI  P+L+ GP  + ++       I ++L   Y          ++  D+A AL 
Sbjct: 139 QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHG--------IEACDLARALW 190

Query: 237 LAYEKAEAEGRYI 249
               +     R++
Sbjct: 191 RLALEEGKGVRFV 203

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 58.8 bits (142), Expect = 7e-10
 Identities = 63/319 (19%), Positives = 100/319 (31%), Gaps = 62/319 (19%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSR---DYFVHGTAREPSDEKNA--RLYEL-------- 50
           E   V +TGA GFL  ++V  LL R   D  +    R    +++A  RL +         
Sbjct: 72  ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR-AESDEDARRRLEKTFDSGDPEL 130

Query: 51  -----EKASENLKLFKADLL---------DYDSVKSAIVGCNGVFHIACPAPSTTVP-NP 95
                E A++ L++   D            +  +   +   + +   A  A    V   P
Sbjct: 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETV---DLIVDSA--AM---VNAFP 182

Query: 96  QMELLEPAVKGTLNVVKACLEAKVKRVIVVSS-GVAVGLNPRWPKGQIMDETCWSDKEYC 154
             EL  P V GT  +++  L  K+K    VS+  V   + P               +   
Sbjct: 183 YHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVD 242

Query: 155 RTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGP---------------LLQSK 199
                 Y  SK   E    E      L V      ++L                 ++ S 
Sbjct: 243 GGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL 302

Query: 200 VNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALL-LAYEKAEAEGRYICTAHM---- 254
           + T          +   + +      + V  VAEA+  L    A +      T H+    
Sbjct: 303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH 362

Query: 255 ---IRARDLVDKLKSL-YP 269
              I   + VD L    YP
Sbjct: 363 DDGIGLDEYVDWLIEAGYP 381

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 57.7 bits (139), Expect = 1e-09
 Identities = 15/127 (11%), Positives = 38/127 (29%), Gaps = 13/127 (10%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           +   K RV + GA GF+  +V    L      +  AR      +          +   + 
Sbjct: 6   VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIV 65

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
              + + ++++  +        ++                  ++   + +VKA       
Sbjct: 66  YGLINEQEAMEKILKEHEIDIVVSTVGG-------------ESILDQIALVKAMKAVGTI 112

Query: 121 RVIVVSS 127
           +  + S 
Sbjct: 113 KRFLPSE 119

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 57.6 bits (139), Expect = 1e-09
 Identities = 34/256 (13%), Positives = 76/256 (29%), Gaps = 42/256 (16%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENL--K 58
           M   + R+ + GA G++   V K  L   +      RE +   N+   +L ++ +     
Sbjct: 1   MG-SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN 59

Query: 59  LFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
           +    + D+ S+  A+   + V  I+                   ++  +N++KA  E  
Sbjct: 60  IVHGSIDDHASLVEAVKNVDVV--ISTVGS-------------LQIESQVNIIKAIKEVG 104

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK 178
             +    S     G +          ++ +  K   R                A+E    
Sbjct: 105 TVKRFFPSE---FGNDVDNVHAVEPAKSVFEVKAKVR---------------RAIE---A 143

Query: 179 TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAE--ALL 236
            G+    +  N   G  L+S          +           ++  +    D+       
Sbjct: 144 EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFV-KEEDIGTFTIKA 202

Query: 237 LAYEKAEAEGRYICTA 252
           +   +   +  Y+   
Sbjct: 203 VDDPRTLNKTLYLRLP 218

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 58/343 (16%), Positives = 107/343 (31%), Gaps = 78/343 (22%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEKASENLKLFK 61
           R+ +TG  G L S +++  L + + +       T +           E+      L + +
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR----------EVLPPVAGLSVIE 71

Query: 62  ADLLDYDSVKSAIVGCN--GVFHIACPAPSTTVPNPQMELLEPA---VKGTLNVVKACLE 116
             + D   ++ A        V H A  A      +      E A   V+G++NV KA  +
Sbjct: 72  GSVTDAGLLERAFDSFKPTHVVHSA--AAYKDPDDW----AEDAATNVQGSINVAKAASK 125

Query: 117 AKVKRVIVVSSGVAV-GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEF 175
           A VKR++   +     G     P    +               + Y +SKT  E     F
Sbjct: 126 AGVKRLLNFQTA-LCYGRPATVP----IPIDS-----PTAPFTS-YGISKTAGE----AF 170

Query: 176 GKKTGLDVVTICPNL----VLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD---- 227
              + + VV+    L    V GP L            +L            +        
Sbjct: 171 LMMSDVPVVS----LRLANVTGPRLAIGPI--PTFYKRLKA--------GQKCFCSDTVR 216

Query: 228 ----VRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKE- 281
               + D      L+ ++    G + + T      +++ D +          +       
Sbjct: 217 DFLDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIKEVFDVVLDY-VGATLAEPVPVVAP 275

Query: 282 -----DEVMLTSEKLQK-LGWS-YRSLEETLVDSVESYKKVGI 317
                  V+L   K +   GW      ++T+   +  Y K G+
Sbjct: 276 GADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGV 318

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 27/142 (19%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS-------DEKNARLYELEKA-- 53
           L+ + + +TG  G      V+ +L                     DE   +  E+     
Sbjct: 19  LDNQTILITGGTGSFGKCFVRKVLDTT--------NAKKIIVYSRDEL--KQSEMAMEFN 68

Query: 54  SENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLN 109
              ++ F  D+ D + +  A+ G +   H A       VP    NP +E ++  + G  N
Sbjct: 69  DPRMRFFIGDVRDLERLNYALEGVDICIHAAA---LKHVPIAEYNP-LECIKTNIMGASN 124

Query: 110 VVKACLEAKVKRVIVVSSGVAV 131
           V+ ACL+  + +VI +S+  A 
Sbjct: 125 VINACLKNAISQVIALSTDKAA 146

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 55.3 bits (133), Expect = 5e-09
 Identities = 39/251 (15%), Positives = 79/251 (31%), Gaps = 35/251 (13%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASE-NLKL 59
           M  +K RV + G  G++   +V   +S  +  +   R        ++  L    +   KL
Sbjct: 1   MD-KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 59

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
            +A L D+  +  A+   + V        S          L   +   L +V+A  EA  
Sbjct: 60  IEASLDDHQRLVDALKQVDVVI-------SALAGGV----LSHHILEQLKLVEAIKEAGN 108

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT 179
            +  + S     G++P   +  +   +                  K +    A+E     
Sbjct: 109 IKRFLPSE---FGMDPDIMEHALQPGSITFID-------------KRKVR-RAIE---AA 148

Query: 180 GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-YESLENKLRMIVDVRDVAEALLLA 238
            +    +  N+  G    S       ++    K   Y     K   + D  DV    + +
Sbjct: 149 SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWV-DEDDVGTYTIKS 207

Query: 239 YEKAEAEGRYI 249
            +  +   + +
Sbjct: 208 IDDPQTLNKTM 218

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 6e-09
 Identities = 54/305 (17%), Positives = 92/305 (30%), Gaps = 91/305 (29%)

Query: 38  EPSDEKNA-RLYE--LEKASENLKLFKADLL--DYDSVKSAI-VGCNGVFHIACPAPSTT 91
                    RL+   L K  E ++ F  ++L  +Y  + S I            P+  T 
Sbjct: 57  SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ------PSMMTR 110

Query: 92  VPNPQMELL----EPAVKGTLNVV---------KACLEAKVKRVIVVSSGVA-VGLNPRW 137
           +   Q + L    +   K   NV          +A LE +  + +++  GV   G     
Sbjct: 111 MYIEQRDRLYNDNQVFAK--YNVSRLQPYLKLRQALLELRPAKNVLID-GVLGSG----- 162

Query: 138 PKGQIMDETCWSDKEYCRTTNN--WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPL 195
            K  +  + C S K  C+      W            L              P  VL  L
Sbjct: 163 -KTWVALDVCLSYKVQCKMDFKIFW------------LNLKNCN-------SPETVLEML 202

Query: 196 ----LQSKVNTSSLVLI-KLLKEGYESLENKLRMIVDVRDVAEALL-LAYEKAEAEGRYI 249
                Q   N +S       +K    S++ +LR ++  +     LL L           +
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---------LNV 253

Query: 250 CTAHMIRA-----------RD--LVDKLKSLYPNY----NYPKSFTEKEDEVML---TSE 289
             A    A           R   + D L +    +    ++  + T  E + +L      
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 290 KLQKL 294
           + Q L
Sbjct: 314 RPQDL 318

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 9e-09
 Identities = 60/424 (14%), Positives = 119/424 (28%), Gaps = 145/424 (34%)

Query: 2   ALEKER----VCVTGAGGFLASWVVKLLLSRDYFVH------------GTAREPSD--EK 43
           AL + R    V + G  G   +WV   +    Y V                  P    E 
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVC-LSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201

Query: 44  NARLY--------ELEKASENLKL-----------------FKADLLDYDSVKSA-IVGC 77
             +L              S N+KL                 ++  LL   +V++A     
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN- 260

Query: 78  NGVFHIACPAPSTT----------VPNPQMELLEPAVKG-----TLNVVKACLEAKVK-- 120
              F+++C    TT                  L+            +++   L+ + +  
Sbjct: 261 --AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 121 -RVIVVSSGVAVGL-------NP-RW---------PKGQIMDET--CWSDKEY------- 153
            R ++ ++   + +           W             I++ +       EY       
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 154 --------------CRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK 199
                               W+ + K++      +  K +          LV     Q K
Sbjct: 379 SVFPPSAHIPTILLSLI---WFDVIKSDVMVVVNKLHKYS----------LVEK---QPK 422

Query: 200 VNTSSLVLIKLLKEGYESLENKL-RMIVDVRDVAEALLLAYEKAEAEGRYICTA---HMI 255
            +T S+  I L  +     E  L R IVD  ++ +             +Y  +    H+ 
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 256 RAR--DLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLG--WSYR-SLEETLVDSVE 310
                + +   + ++ ++     F E+         K++     W+   S+  TL   ++
Sbjct: 483 NIEHPERMTLFRMVFLDFR----FLEQ---------KIRHDSTAWNASGSILNTLQQ-LK 528

Query: 311 SYKK 314
            YK 
Sbjct: 529 FYKP 532

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 19/138 (13%)

Query: 10  VTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD 68
           +TGA G L + +    ++      H   R    EK             + + + D  + +
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVRNV--EKVPDD-----WRGKVSVRQLDYFNQE 57

Query: 69  SVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG 128
           S+  A  G + V  I      +    P++E          N+V A  ++ V   I+    
Sbjct: 58  SMVEAFKGMDTVVFIPSIIHPSFKRIPEVE----------NLVYAAKQSGVAH-IIFIGY 106

Query: 129 VAVGLNPRWPKGQIMDET 146
            A   N  +         
Sbjct: 107 YADQHNNPFHMSPYFGYA 124

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 19/123 (15%)

Query: 10  VTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           VTGA G L   V++ LL +     +    R    EK + L     A + +++   D    
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVRNV--EKASTL-----ADQGVEVRHGDYNQP 57

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
           +S++ A  G + +  I+ P    T+   Q            NVVKA  +A VK +     
Sbjct: 58  ESLQKAFAGVSKLLFISGPHYDNTLLIVQHA----------NVVKAARDAGVKHIAYTGY 107

Query: 128 GVA 130
             A
Sbjct: 108 AFA 110

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 26/142 (18%), Positives = 54/142 (38%), Gaps = 19/142 (13%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL 64
           K ++ + G  G++ + +VK  L   +  +   R P+  K   L E +  S    + K +L
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTR-PNSSKTTLLDEFQ--SLGAIIVKGEL 67

Query: 65  LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVI 123
            +++ +   +   + V  I+  A              P +     +++A   A  +KR +
Sbjct: 68  DEHEKLVELMKKVDVV--ISALAF-------------PQILDQFKILEAIKVAGNIKRFL 112

Query: 124 VVSSGVAVGLNPRWPKGQIMDE 145
               GV        P  + + E
Sbjct: 113 PSDFGVEEDRINALPPFEALIE 134

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 50.3 bits (120), Expect = 3e-07
 Identities = 22/156 (14%), Positives = 51/156 (32%), Gaps = 25/156 (16%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS-----DEKNARLYELEKASENLKL 59
           + ++ + G  G +   +V   +      +   R+       + K   +   +  S  + L
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVIL 59

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
            + D+ D++++  AI   + V  I                    ++  + ++KA  EA  
Sbjct: 60  LEGDINDHETLVKAIKQVDIV--ICAAGR-------------LLIEDQVKIIKAIKEAGN 104

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR 155
            +    S     GL+             + +K   R
Sbjct: 105 VKKFFPSE---FGLDVDRHDAVEPVRQVFEEKASIR 137

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 64/359 (17%), Positives = 129/359 (35%), Gaps = 69/359 (19%)

Query: 4   EKERVCVTGAGGFLASWVV-KLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
            + RV + G  GF+ + +  +LL    Y V+G   +   +  +R         +    + 
Sbjct: 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLN----HPHFHFVEG 367

Query: 63  DLLDYDS-VKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
           D+  +   ++  +  C+ V  +   A P     NP + + E   +  L +++ C++ + K
Sbjct: 368 DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNP-LRVFELDFEENLRIIRYCVKYR-K 425

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW-YCLSKTEAESEALEFGKKT 179
           R+I  S+    G+       +  DE   +          W Y +SK   +     +G+K 
Sbjct: 426 RIIFPSTSEVYGM----CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 481

Query: 180 GLDVVTICPNLVLGPLLQS----KVNTSSLVL-----------IKLLKEGYESLENKLRM 224
           GL      P   +GP L +    ++ +S  +            IKL+  G +      R 
Sbjct: 482 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK-----RC 536

Query: 225 IVDVRDVAEALLLAYEKAEAEGRYICTAHMIR---------ARDLVDKLKSLYPNYNYPK 275
             D+RD  EAL    E A       C   +I            +L + L + +  +    
Sbjct: 537 FTDIRDGIEALYRIIENAGN----RCDGEIINIGNPENEASIEELGEMLLASFEKHPLRH 592

Query: 276 SFTEKEDEVMLTSEKL-------------------QKLGWSYR-SLEETLVDSVESYKK 314
            F       ++ S                      + L W  +  ++ET+ ++++ + +
Sbjct: 593 HFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLR 651

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 48.4 bits (115), Expect = 1e-06
 Identities = 18/126 (14%), Positives = 49/126 (38%), Gaps = 17/126 (13%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL--EKASENLKLFK 61
             E++ + G  G++  ++V+  LS  +     AR  + +      +L  E  S  + + +
Sbjct: 3   HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE 62

Query: 62  ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR 121
            ++ +++ + S +   + V  I+                 P +   ++++ A   A   +
Sbjct: 63  GEMEEHEKMVSVLKQVDIV--ISALPF-------------PMISSQIHIINAIKAAGNIK 107

Query: 122 VIVVSS 127
             + S 
Sbjct: 108 RFLPSD 113

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 22/128 (17%)

Query: 10  VTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           +TGA G L  +V++ L+       +    R P   K   L     A++ + + +AD  D 
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVRNP--AKAQAL-----AAQGITVRQADYGDE 56

Query: 68  DSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS 127
            ++ SA+ G   +  I   +       PQ            NV+ A   A VK  I  +S
Sbjct: 57  AALTSALQGVEKLLLI--SSSEVGQRAPQHR----------NVINAAKAAGVKF-IAYTS 103

Query: 128 GVAVGLNP 135
            +    +P
Sbjct: 104 LLHADTSP 111

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 46.4 bits (111), Expect = 5e-06
 Identities = 28/132 (21%), Positives = 53/132 (40%), Gaps = 30/132 (22%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           R  +TG  GF+  ++   L  ++  V GT+R    +             N+++   D++D
Sbjct: 14  RALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL-----------PNVEMISLDIMD 62

Query: 67  YDSVKSAI--VGCNGVFHIAC--------PAPSTTVPNPQMELLEPAVKGTLNVVKACLE 116
              VK  I  +  + +FH+A              T            V GTL+V+ A  +
Sbjct: 63  SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTF--------STNVFGTLHVLDAVRD 114

Query: 117 AKVK-RVIVVSS 127
           + +  R++ + S
Sbjct: 115 SNLDCRILTIGS 126

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 60/311 (19%), Positives = 100/311 (32%), Gaps = 60/311 (19%)

Query: 8   VCVTGAG-GFLASWVVKLL--LSRDYFVHGTAREPSDEK--NARLYELEKASENLKLFKA 62
           V +TG   G      V+L    S+ + V+ T R+   +         L     +L+  + 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 63  DLLDYDSVKSAIVGCNGVFH-----------IACPAPSTTVPNPQM-ELLEPAVKGTLNV 110
           D+ D  SV +A      V             +    P   +    +  +L+  V GT+ +
Sbjct: 65  DVRDSKSVAAAR---ERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

Query: 111 VKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK- 165
           ++A L         RV+V  S V  GL    P                   N+ YC SK 
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGS-VG-GLMG-LP------------------FNDVYCASKF 160

Query: 166 -TEAESEAL--EFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL 222
             E   E+L        G+ +  I    V    ++  + +   VL +     +      L
Sbjct: 161 ALEGLCESLAVLL-LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL 219

Query: 223 RMIV--------DVRDVAEALLLAYEKAEAEGRYICT--AHMIRARDLVDKLKSLYPNYN 272
                       +  +VAE  L A    +   RY  T     +    L D   S Y    
Sbjct: 220 AHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNYVTAM 279

Query: 273 YPKSFTEKEDE 283
           + + F +   +
Sbjct: 280 HREVFGDVPAK 290

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 44/209 (21%), Positives = 72/209 (34%), Gaps = 48/209 (22%)

Query: 1   MALEKERVCVTGA-GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKL 59
           M+L+K+   VTGA GG      +   LSRD+ V+   R P       L  L    E ++ 
Sbjct: 1   MSLKKKIAVVTGATGGMGIE--IVKDLSRDHIVYALGRNP-----EHLAAL-AEIEGVEP 52

Query: 60  FKADLLDYDSVKSAIV------GCNGVFHIACPAPSTTVPNPQME----LLEPAVKGTLN 109
            ++D++     +  +         + + H A  A  TT+    +      L+  V     
Sbjct: 53  IESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAE 112

Query: 110 VVKACL---EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK- 165
           + +  L    A    VI ++SG   G +P                         Y  SK 
Sbjct: 113 LSRQLLPALRAASGCVIYINSGAGNGPHPGN---------------------TIYAASKH 151

Query: 166 -TEAESEAL--EFGKKTGLDVVTICPNLV 191
                ++A   E     G+ V T+ P   
Sbjct: 152 ALRGLADAFRKEEA-NNGIRVSTVSPGPT 179

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 50/287 (17%), Positives = 89/287 (31%), Gaps = 65/287 (22%)

Query: 1   MALEKERVCVTGAG-GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL----EKASE 55
           M + K+ + +TGA  GF      + L    + V+ + R+      + +  +         
Sbjct: 1   MVMSKKIILITGASSGFGRLTA-EALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDV 59

Query: 56  NLKLFKADLLDYDSVKSA---IVGCNG----VFH---IACPAPSTTVPNPQM-ELLEPAV 104
           +L+  + D+    SV  A   I+G +G    + H        P+      Q  EL +  V
Sbjct: 60  DLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINV 119

Query: 105 KGTLNVVKACL----EAKVKRVIVVSS-GVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN 159
             T  V +A L      K   +I +SS   A G  P                        
Sbjct: 120 LSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP---------------------YLA 158

Query: 160 WYCLSK--TEAESEAL-----EFGKKTGLDVVTICPNLV---LGPLLQSKVNTSSLVLIK 209
            Y  +K   +A +         +    G++   I P            S V        +
Sbjct: 159 PYFAAKAAMDAIAVQYARELSRW----GIETSIIVPGAFTSGTNHFAHSGVPDDHARQAE 214

Query: 210 LLKEGYESLENKLRMIV--------DVRDVAEALLLAYEKAEAEGRY 248
                   L  +++           DV  VA+A++     A  +  +
Sbjct: 215 YEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPF 261

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 40.2 bits (95), Expect = 5e-04
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 10 VTGA-GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD 68
          +TG  G +LA    KLLL + Y VHG     S +   RL EL     +++    D+ D  
Sbjct: 22 ITGQDGAYLA----KLLLEKGYRVHGLVARRSSDTRWRLRELGI-EGDIQYEDGDMADAC 76

Query: 69 SVKSAI 74
          SV+ A+
Sbjct: 77 SVQRAV 82

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 39/222 (17%), Positives = 65/222 (29%), Gaps = 66/222 (29%)

Query: 8   VCVTGAG---GFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
           V VTGA    G     +V+ L+       +  TAR+       +          + +   
Sbjct: 6   VVVTGANRGIGLG---LVQQLVKDKNIRHIIATARDVEKATELK----SIKDSRVHVLPL 58

Query: 63  DLLDYDSVKSA--------------IVGCN-GVFHIACPAPSTTVPNPQ--MELLEPAVK 105
            +    S+ +               ++  N GV        + T PN     E L+    
Sbjct: 59  TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL---SYGTNTEPNRAVIAEQLDVNTT 115

Query: 106 GTLNVVKACL---------------EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD 150
             + + +  L                     VI +SSG+          G I D T    
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL----------GSITDNT---- 161

Query: 151 KEYCRTTNNWYCLSKT----EAESEALEFGKKTGLDVVTICP 188
               +     Y +SK        + A++  K   + VV  CP
Sbjct: 162 SGSAQFPVLAYRMSKAAINMFGRTLAVDL-KDDNVLVVNFCP 202

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.98
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
1spx_A	278	Short-chain reductase family member (5L265); paral	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.96
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.96
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.96
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.96
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.96
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.96
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.96
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.96
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.96
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.96
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.96
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.96
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.96
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.96
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.96
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.96
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.95
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.95
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.95
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.95
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.95
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.95
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.95
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.95
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.95
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.95
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.95
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.95
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.95
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.95
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.95
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.95
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.95
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.95
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.95
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.95
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.95
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.94
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.94
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.94
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.94
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.94
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.94
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.94
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.94
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.94
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.94
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.94
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.94
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.94
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.94
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.94
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.94
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.94
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.94
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.94
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.94
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.94
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.94
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.94
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.94
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.94
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.94
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.94
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.93
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.93
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.93
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.93
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.93
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.93
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.93
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.93
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.93
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.93
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.93
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.93
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.92
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.92
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.91
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.91
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.91
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.91
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.9
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.89
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.89
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.89
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.88
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.87
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.86
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.85
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.85
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.85
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.84
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.82
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.79
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.78
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.78
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.77
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.77
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.76
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.76
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.72
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.72
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.56
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.54
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.38
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.37
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.21
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.1
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.04
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.98
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.96
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.95
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.86
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.83
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.79
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.71
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.7
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.69
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.66
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.63
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.61
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.58
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.46
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.44
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.43
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.37
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.26
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.26
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.21
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.18
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.09
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.08
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.06
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.06
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.03
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.02
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.02
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.96
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.94
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.93
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.93
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.88
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.88
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.86
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.85
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.84
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.83
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.82
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.8
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.8
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.79
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.78
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.77
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.76
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.76
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.76
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.73
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.73
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.69
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.68
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.68
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.67
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.66
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.63
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.63
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.62
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.62
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.59
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.57
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.57
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.57
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.56
1lnq_A	336	MTHK channels, potassium channel related protein;	97.56
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.56
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.55
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.55
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.54
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.53
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.5
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.48
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.48
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.47
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.47
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.47
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.45
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.45
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.45
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.44
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.43
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.43
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.43
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.42
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.4
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.38
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.38
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.37
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.36
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.32
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.32
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.3
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.3
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.29
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.27
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.26
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.26
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.24
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.24
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.23
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.22
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.22
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.21
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.2
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.18
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.17
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.17
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.16
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.16
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.16
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.15
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.15
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.14
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.14
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.14
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.1
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.1
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.1
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.1
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.1
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.09
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.08
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	97.08
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.08
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.06
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.06
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.05
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.04
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.04
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.04
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.03
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.02
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.01
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.01
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.0
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.0
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.99
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.98
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.97
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.97
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.96
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.96
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.96
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.94
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.94
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.93
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.93
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.93
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.92
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.92
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.92
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.91
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.89
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.89
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.89
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.88
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.88
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.86
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.85
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.85
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.85
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.85
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.84
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.82
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.8
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.8
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.79
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.79
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.78
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.78
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.77
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.76
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.75
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	96.74
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.73
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.72
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.72

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=2.8e-49  Score=348.94  Aligned_cols=305  Identities=17%  Similarity=0.198  Sum_probs=241.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   76 (319)
                      |++++|+|||||||||||++++++|+++|  ++|++++|.........+..+. ..++++++.+|++|.+.+.+++++  
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            45678999999999999999999999999  7888888765332222222221 135899999999999999999987  


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccccc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  156 (319)
                      +|+|||+|+........+.+...+++|+.++.+++++|++.++++|||+||.++|+..+   ...+++|+++..|     
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~---~~~~~~E~~~~~p-----  170 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLG---KTGRFTEETPLAP-----  170 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCC---SSCCBCTTSCCCC-----
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCC---cCCCcCCCCCCCC-----
Confidence            99999999977654333444789999999999999999999999999999977665432   3578899887665     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAE  233 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~  233 (319)
                       .++|+.+|.++|.+++.++++++++++++||+++||+..... ..+..++..+..+.+..   .|++.++|+|++|+|+
T Consensus       171 -~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  248 (346)
T 4egb_A          171 -NSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCS  248 (346)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHH
T ss_pred             -CChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHH
Confidence             788999999999999999988899999999999999986543 45667777888887655   3458899999999999


Q ss_pred             HHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCCC----CCCCCCCCCceeechHHHHH-hCCccc-cHHHHHH
Q 020924          234 ALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYNY----PKSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLV  306 (319)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~----~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~  306 (319)
                      +++.+++++..+++|++++ ..+|+.|+++.+.+.+|....    ..........+.+|++|+++ |||+|+ +++++|+
T Consensus       249 a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~  328 (346)
T 4egb_A          249 AIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQ  328 (346)
T ss_dssp             HHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred             HHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHH
Confidence            9999999887666898775 779999999999999984221    11122233557799999998 999999 9999999


Q ss_pred             HHHHHHHHcC
Q 020924          307 DSVESYKKVG  316 (319)
Q Consensus       307 ~~~~~~~~~~  316 (319)
                      ++++||+++.
T Consensus       329 ~~~~~~~~~~  338 (346)
T 4egb_A          329 ETVQWYEKNE  338 (346)
T ss_dssp             HHHHHHHHCH
T ss_pred             HHHHHHHhhh
Confidence            9999999864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=3.5e-49  Score=349.02  Aligned_cols=304  Identities=15%  Similarity=0.132  Sum_probs=244.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-----CCCeEEEEccCCChhhHHHHhc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-----SENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      |.|++|+|||||||||||++++++|+++|++|++++|+..... ..+..+...     ..+++++.+|++|.+++.++++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQ-YNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH-HHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCch-hhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            3467799999999999999999999999999999999765422 122222111     1578999999999999999999


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      ++|+|||+|+..........+...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++..|    
T Consensus       100 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~----~~~~~~E~~~~~p----  171 (351)
T 3ruf_A          100 GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDH----PALPKVEENIGNP----  171 (351)
T ss_dssp             TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC----CCSSBCTTCCCCC----
T ss_pred             CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCC----CCCCCccCCCCCC----
Confidence            99999999996543211122367889999999999999999999999999997766543    3578899987655    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccc---cCCcccccccHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYES---LENKLRMIVDVR  229 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~  229 (319)
                        .++|+.+|.++|.+++.++++++++++++||+++||++.....   ..+..++.....+.+..   .|++.++|+|++
T Consensus       172 --~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  249 (351)
T 3ruf_A          172 --LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYID  249 (351)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred             --CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHH
Confidence              7889999999999999998888999999999999999865431   35567777888887665   345889999999


Q ss_pred             HHHHHHHHhhccC--CCCceEEEe-cccCCHHHHHHHHHHhCCCCCC----CC----CCCCCCCceeechHHHHH-hCCc
Q 020924          230 DVAEALLLAYEKA--EAEGRYICT-AHMIRARDLVDKLKSLYPNYNY----PK----SFTEKEDEVMLTSEKLQK-LGWS  297 (319)
Q Consensus       230 D~a~~~~~~~~~~--~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~----~~----~~~~~~~~~~~d~~k~~~-lg~~  297 (319)
                      |+|++++.++...  ..+++||++ +..+|+.|+++.+.+.+|....    +.    ..........+|++|+++ |||+
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  329 (351)
T 3ruf_A          250 NVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYR  329 (351)
T ss_dssp             HHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCC
T ss_pred             HHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCC
Confidence            9999999999872  335589876 5899999999999999975211    11    112223568899999998 9999


Q ss_pred             cc-cHHHHHHHHHHHHHHc
Q 020924          298 YR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       298 ~~-~~~~~l~~~~~~~~~~  315 (319)
                      |+ +++++|+++++||+++
T Consensus       330 p~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          330 PNIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             CCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHh
Confidence            99 9999999999999875

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.9e-47  Score=332.36  Aligned_cols=287  Identities=15%  Similarity=0.178  Sum_probs=238.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +|+|||||||||||++++++|+++|++|++++|++...  . +       .+++++.+|++ .+++.++++++|+|||+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-~-------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a   70 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK--A-I-------NDYEYRVSDYT-LEDLINQLNDVDAVVHLA   70 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc--c-C-------CceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence            46899999999999999999999999999999984321  1 1       26899999999 999999999999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +.....   ++ ...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++..|      .++|+.+
T Consensus        71 ~~~~~~---~~-~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~----~~~~~~E~~~~~p------~~~Y~~s  136 (311)
T 3m2p_A           71 ATRGSQ---GK-ISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDE----TSLPWNEKELPLP------DLMYGVS  136 (311)
T ss_dssp             CCCCSS---SC-GGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCG----GGCSBCTTSCCCC------SSHHHHH
T ss_pred             ccCCCC---Ch-HHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCC----CCCCCCCCCCCCC------CchhHHH
Confidence            976553   33 78899999999999999999999999999996655433    3577889887665      7889999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhhcc
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      |.++|.+++.++++++++++++||+++||+..... ..+..++.....+.+..   .+++.++|+|++|+|++++.++++
T Consensus       137 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~  215 (311)
T 3m2p_A          137 KLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQ  215 (311)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhc
Confidence            99999999999988899999999999999986543 45667777777787765   245889999999999999999998


Q ss_pred             CCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC---C-CCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHHH
Q 020924          242 AEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK---S-FTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYKK  314 (319)
Q Consensus       242 ~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~---~-~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~  314 (319)
                      +..+++|+++ +..+|+.|+++.+.+.+|......   . .........+|++|+++ |||+|+ +++++|+++++|+++
T Consensus       216 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~  295 (311)
T 3m2p_A          216 EKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRG  295 (311)
T ss_dssp             TTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC
T ss_pred             CCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHh
Confidence            8766689776 589999999999999998422111   1 22334668999999999 999999 999999999999998


Q ss_pred             cCC
Q 020924          315 VGI  317 (319)
Q Consensus       315 ~~~  317 (319)
                      .+.
T Consensus       296 ~~~  298 (311)
T 3m2p_A          296 LDD  298 (311)
T ss_dssp             ---
T ss_pred             ccc
Confidence            765

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=1.4e-47  Score=336.92  Aligned_cols=313  Identities=38%  Similarity=0.683  Sum_probs=232.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh-HHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK-NARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |+.++|+|||||||||||++++++|+++|++|+++.|+..... ...+..+.....+++++.+|++|.+++.++++++|+
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   80 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTG   80 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSE
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCE
Confidence            7777899999999999999999999999999999999865321 111111111112578999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccc--c-c
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY--C-R  155 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~--~-~  155 (319)
                      |||+|+.... ...++....+++|+.++.+++++|++.+ +++|||+||.+++++.+.  ...+++|+++..++.  + .
T Consensus        81 Vih~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~  157 (337)
T 2c29_D           81 VFHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEH--QLPVYDESCWSDMEFCRAKK  157 (337)
T ss_dssp             EEECCCCCCS-SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSS--CCSEECTTCCCCHHHHHHHC
T ss_pred             EEEeccccCC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCC--CCcccCcccCCchhhhcccC
Confidence            9999986522 2233434588999999999999999887 899999999877775432  234678887544322  0 1


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHH---HHhcCccccCC-cccccccHHHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIK---LLKEGYESLEN-KLRMIVDVRDV  231 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~i~v~D~  231 (319)
                      .+.++|+.||.++|.++.+++++++++++++||+++|||.....  ... .+..   ...+.....+. ...+|+|++|+
T Consensus       158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dv  234 (337)
T 2c29_D          158 MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS--MPP-SLITALSPITGNEAHYSIIRQGQFVHLDDL  234 (337)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS--CCH-HHHHHTHHHHTCGGGHHHHTEEEEEEHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC--CCc-hHHHHHHHHcCCCccccccCCCCEEEHHHH
Confidence            13567999999999999998877799999999999999975433  111 1221   13333222111 23459999999


Q ss_pred             HHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCC---CCCceeechHHHHHhCCccc-cHHHHHHH
Q 020924          232 AEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE---KEDEVMLTSEKLQKLGWSYR-SLEETLVD  307 (319)
Q Consensus       232 a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~---~~~~~~~d~~k~~~lg~~~~-~~~~~l~~  307 (319)
                      |++++.+++++...++|++++..+|++|+++.+.+.++...++.....   ......+|++|+++|||+|+ ++++++++
T Consensus       235 a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~  314 (337)
T 2c29_D          235 CNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTG  314 (337)
T ss_dssp             HHHHHHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCCCHHHHHHH
T ss_pred             HHHHHHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCCCHHHHHHH
Confidence            999999998766667898888889999999999999865444432222   22457799999966999998 99999999


Q ss_pred             HHHHHHHcCCCC
Q 020924          308 SVESYKKVGILN  319 (319)
Q Consensus       308 ~~~~~~~~~~~~  319 (319)
                      +++|+++++.++
T Consensus       315 ~~~~~~~~~~~~  326 (337)
T 2c29_D          315 AVDTCRAKGLLP  326 (337)
T ss_dssp             HHHHHHHTTSSC
T ss_pred             HHHHHHHcCCCC
Confidence            999999988764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=6e-47  Score=333.36  Aligned_cols=304  Identities=17%  Similarity=0.160  Sum_probs=236.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc--Cc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV--GC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~   77 (319)
                      |+ ++|+|||||||||||++++++|+++|++|++++|+...... ....+.. .+.+++++.+|++|.+++.++++  ++
T Consensus         2 M~-~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (341)
T 3enk_A            2 MS-TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKRE-AIARIEKITGKTPAFHETDVSDERALARIFDAHPI   79 (341)
T ss_dssp             CC-SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTH-HHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCC
T ss_pred             CC-CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHH-HHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCC
Confidence            44 45799999999999999999999999999999997654321 1111111 13578999999999999999998  89


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccC
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |+|||+||........+.....+++|+.++.+++++|++.++++|||+||.++++ .+   ...+++|+++..|      
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g-~~---~~~~~~e~~~~~~------  149 (341)
T 3enk_A           80 TAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG-VP---ERSPIDETFPLSA------  149 (341)
T ss_dssp             CEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC-SC---SSSSBCTTSCCBC------
T ss_pred             cEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec-CC---CCCCCCCCCCCCC------
Confidence            9999999975432112223678899999999999999999999999999976654 33   3577888887654      


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCC-ceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhcC--ccc---------
Q 020924          158 NNWYCLSKTEAESEALEFGKKTG-LDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKEG--YES---------  217 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~~--~~~---------  217 (319)
                      .++|+.+|.++|.+++.++.+++ ++++++||+++||+.....        ...+..++.+...+.  ++.         
T Consensus       150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (341)
T 3enk_A          150 TNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTP  229 (341)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSST
T ss_pred             CChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCC
Confidence            78899999999999999988775 9999999999999864211        122333444544443  221         


Q ss_pred             cCCcccccccHHHHHHHHHHhhccC---CCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceeechH
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKA---EAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVMLTSE  289 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d~~  289 (319)
                      .|++.++|+|++|+|++++.++++.   ..+++||++ +..+|+.|+++.+.+.+|. +.+.    ..........+|++
T Consensus       230 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~  308 (341)
T 3enk_A          230 DGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR-AVPYELVARRPGDVAECYANPA  308 (341)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCSEECBCCH
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC-CcceeeCCCCCCCccccccCHH
Confidence            3458899999999999999999862   345689886 5899999999999999984 2221    12233456889999


Q ss_pred             HHHH-hCCccc-cHHHHHHHHHHHHHHcCC
Q 020924          290 KLQK-LGWSYR-SLEETLVDSVESYKKVGI  317 (319)
Q Consensus       290 k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~  317 (319)
                      |+++ |||+|+ +++++|+++++||+++..
T Consensus       309 k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~  338 (341)
T 3enk_A          309 AAAETIGWKAERDLERMCADHWRWQENNPR  338 (341)
T ss_dssp             HHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence            9998 999997 999999999999998753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1e-46  Score=328.07  Aligned_cols=291  Identities=20%  Similarity=0.222  Sum_probs=229.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      ||+|||||||||||++++++|+++|+. +++.+....... .      ...+++++.+|++| +++.++++++|+|||+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~-v~~~~~~~~~~~-~------~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNEI-VVIDNLSSGNEE-F------VNEAARLVKADLAA-DDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSCE-EEECCCSSCCGG-G------SCTTEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCE-EEEEcCCCCChh-h------cCCCcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence            468999999999999999999999954 445543332111 1      13578999999999 99999999999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +........+.+...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+.+..|      .++|+.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~----~~~~~~E~~~~~~------~~~Y~~s  141 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEA----KVIPTPEDYPTHP------ISLYGAS  141 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSC----SSSSBCTTSCCCC------CSHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcC----CCCCCCCCCCCCC------CCHHHHH
Confidence            97654433344588999999999999999999999999999997766543    3567888876655      7889999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC-ccc---cCCcccccccHHHHHHHHHHhhc
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-YES---LENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      |.++|.+++.++++++++++++||+++||+....  ..+..++.+...+. +..   .|++.++|+|++|+|++++.+++
T Consensus       142 K~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~  219 (313)
T 3ehe_A          142 KLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR  219 (313)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc
Confidence            9999999999999899999999999999997653  35566777776663 332   44588999999999999999999


Q ss_pred             cCCCCceEEEe-cccCCHHHHHHHHHHhCCCCC---CCCC---CCCCCCceeechHHHHHhCCccc-cHHHHHHHHHHHH
Q 020924          241 KAEAEGRYICT-AHMIRARDLVDKLKSLYPNYN---YPKS---FTEKEDEVMLTSEKLQKLGWSYR-SLEETLVDSVESY  312 (319)
Q Consensus       241 ~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~---~~~~---~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~  312 (319)
                      ....+++||++ +..+|+.|+++.+.+.+|...   .+..   .........+|++|+++|||+|+ +++++|+++++||
T Consensus       220 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~  299 (313)
T 3ehe_A          220 GDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDL  299 (313)
T ss_dssp             CCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHH
T ss_pred             cCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence            55556689876 589999999999999998421   1110   11222457899999977999999 9999999999999


Q ss_pred             HHcC
Q 020924          313 KKVG  316 (319)
Q Consensus       313 ~~~~  316 (319)
                      +++.
T Consensus       300 ~~~~  303 (313)
T 3ehe_A          300 VEDL  303 (313)
T ss_dssp             HHHH
T ss_pred             HhCc
Confidence            9864

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=8.5e-47  Score=332.02  Aligned_cols=313  Identities=38%  Similarity=0.621  Sum_probs=227.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh-HHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK-NARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +|+|||||||||||++++++|+++|++|+++.|+..... ...+..+. ...+++++.+|++|.+++.++++++|+|||+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            578999999999999999999999999999999765321 11122221 1247889999999999999999999999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccc--cccC-Cc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY--CRTT-NN  159 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~--~~~~-~~  159 (319)
                      |+.... ...++....+++|+.++.+++++|++.+ ++||||+||.+++++.+......+++|+++..++.  +..+ ..
T Consensus        88 A~~~~~-~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           88 ATPVHF-ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             SSCCCC----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred             CCccCC-CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence            986532 1223334589999999999999999985 89999999987665432111123778887544322  1111 23


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC--------CcccccccHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE--------NKLRMIVDVRDV  231 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~  231 (319)
                      +|+.||.++|.+++.++++++++++++||+++|||............+.....+.....+        ....+|+|++|+
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dv  246 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV  246 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHH
Confidence            599999999999999887779999999999999997654321111112222334322111        123389999999


Q ss_pred             HHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCC--CCCceeechHHHHHhCCccc-cHHHHHHHH
Q 020924          232 AEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE--KEDEVMLTSEKLQKLGWSYR-SLEETLVDS  308 (319)
Q Consensus       232 a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~--~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~  308 (319)
                      |++++.+++++...++|++++..+|+.|+++.+.+.++..++|.....  ......+|++|+++|||+|+ +++++|+++
T Consensus       247 a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~~gl~~~  326 (338)
T 2rh8_A          247 CRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDES  326 (338)
T ss_dssp             HHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCSSCSCCCCCHHHHHHTCCCSCCHHHHHHHH
T ss_pred             HHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCcCcceeechHHHHHhCCCCCCCHHHHHHHH
Confidence            999999998766667898888789999999999999875444332211  11237899999966999999 999999999


Q ss_pred             HHHHHHcCCCC
Q 020924          309 VESYKKVGILN  319 (319)
Q Consensus       309 ~~~~~~~~~~~  319 (319)
                      ++|+++++.++
T Consensus       327 ~~~~~~~~~~~  337 (338)
T 2rh8_A          327 VEYFKAKGLLQ  337 (338)
T ss_dssp             HHHHHHTTCC-
T ss_pred             HHHHHHcCCCC
Confidence            99999998764

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=8.9e-47  Score=329.64  Aligned_cols=311  Identities=35%  Similarity=0.580  Sum_probs=228.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc-CCCh-hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR-EPSD-EKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +|+|||||||||||++++++|+++|++|+++.| ++.. .....+..+.....+++++.+|++|.+++.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            478999999999999999999999999999998 5422 11111222111112578889999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCcccCCCCCCCccc--cccCCc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY--CRTTNN  159 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~--~~~~~~  159 (319)
                      +|+.... ...++...++++|+.++.+++++|++. ++++|||+||.+++++.+.  ...+++|+++..+++  +..+.+
T Consensus        81 ~A~~~~~-~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           81 TASPIDF-AVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGK--DKDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             CCCCC---------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSS--CCSEECTTCCCCHHHHHHHCCTT
T ss_pred             cCCcccC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCC--CCeecCCccccchhhhcccCccc
Confidence            9975421 222333458999999999999999988 7899999999877765432  235678887654322  112222


Q ss_pred             -hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHh
Q 020924          160 -WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLA  238 (319)
Q Consensus       160 -~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  238 (319)
                       +|+.||.++|.++.+++++++++++++||+++||+............+.....+.....+....+|+|++|+|++++.+
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~  237 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL  237 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHH
Confidence             6999999999999998887899999999999999975432111111122234444333333233899999999999999


Q ss_pred             hccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCCC--CCC--CCCceeechHHHHHhCCccc-cHHHHHHHHHHHHH
Q 020924          239 YEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKS--FTE--KEDEVMLTSEKLQKLGWSYR-SLEETLVDSVESYK  313 (319)
Q Consensus       239 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~--~~~--~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~~  313 (319)
                      ++.+...|.|++++..+|+.|+++.+.+.++..+++..  ...  ......+|++|+++|||+|+ +++++|+++++|++
T Consensus       238 ~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~  317 (322)
T 2p4h_X          238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCK  317 (322)
T ss_dssp             HHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHH
T ss_pred             hhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCCcceecccHHHHHhCCccCCCHHHHHHHHHHHHH
Confidence            98765556799878899999999999998875444432  111  11357899999966999999 99999999999999


Q ss_pred             HcCCC
Q 020924          314 KVGIL  318 (319)
Q Consensus       314 ~~~~~  318 (319)
                      +++.+
T Consensus       318 ~~~~~  322 (322)
T 2p4h_X          318 EKGYL  322 (322)
T ss_dssp             HHTCC
T ss_pred             hcCCC
Confidence            98764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=7.2e-47  Score=328.84  Aligned_cols=290  Identities=22%  Similarity=0.246  Sum_probs=232.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|||||||||||++++++|+++|++|++++|+.......       ...+++++.+|++|.+ +.+++++ |+|||+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------VNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------SCTTSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------cCCCceEEECccccHH-HHhhcCC-CEEEECCC
Confidence            5799999999999999999999999999999976542110       1357899999999998 8888887 99999999


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ........+.+...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++..|      .++|+.+|
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~----~~~~~~e~~~~~p------~~~Y~~sK  141 (312)
T 3ko8_A           72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDA----DVIPTPEEEPYKP------ISVYGAAK  141 (312)
T ss_dssp             SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC----SSSSBCTTSCCCC------CSHHHHHH
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCC----CCCCCCCCCCCCC------CChHHHHH
Confidence            6544333333478899999999999999999999999999997766543    3577888876655      78899999


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC-ccc---cCCcccccccHHHHHHHHHHhhcc
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-YES---LENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      .++|.+++.++++++++++++||+++||+....  ..+..++.+...+. ...   .+++.++|+|++|+|++++.++++
T Consensus       142 ~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          142 AAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK  219 (312)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence            999999999998889999999999999997653  34556677776664 322   345889999999999999999987


Q ss_pred             ---C-CCCceEEEe-cccCCHHHHHHHHHHhCCCCC----CCCC-----CCCCCCceeechHHHHH-hCCccc-cHHHHH
Q 020924          242 ---A-EAEGRYICT-AHMIRARDLVDKLKSLYPNYN----YPKS-----FTEKEDEVMLTSEKLQK-LGWSYR-SLEETL  305 (319)
Q Consensus       242 ---~-~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~----~~~~-----~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l  305 (319)
                         . ..+++||++ +..+|+.|+++.+.+.+|...    .+..     .+.......+|++|+++ |||+|+ +++++|
T Consensus       220 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l  299 (312)
T 3ko8_A          220 FEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAV  299 (312)
T ss_dssp             HHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHH
T ss_pred             ccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHH
Confidence               3 334588877 489999999999999997321    1110     12233558899999977 999999 999999


Q ss_pred             HHHHHHHHHcC
Q 020924          306 VDSVESYKKVG  316 (319)
Q Consensus       306 ~~~~~~~~~~~  316 (319)
                      +++++|+++++
T Consensus       300 ~~~~~~~~~~~  310 (312)
T 3ko8_A          300 KKTAEDLAKEL  310 (312)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhhh
Confidence            99999999875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=3.1e-46  Score=330.23  Aligned_cols=303  Identities=17%  Similarity=0.150  Sum_probs=238.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh--hHHHHH-hhhc-cCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE--KNARLY-ELEK-ASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |+||+|||||||||||++++++|+++|++|++++|+....  ....+. .+.. ...+++++.+|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            5678999999999999999999999999999999976421  111111 1100 02578999999999999999999999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      +|||+|+........+.+...+++|+.++.+++++|++.++++|||+||.++++..    ...+++|+++..|      .
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~----~~~~~~E~~~~~~------~  174 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDH----PGLPKVEDTIGKP------L  174 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC----CCSSBCTTCCCCC------C
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCC----CCCCCCCCCCCCC------C
Confidence            99999996542111122367899999999999999999999999999998776543    2467888887554      6


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccc---cCCcccccccHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVA  232 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a  232 (319)
                      ++|+.+|.++|.+++.++++++++++++||+.+||+.....   ...+..++.....+.+..   .+++.++|+|++|+|
T Consensus       175 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  254 (352)
T 1sb8_A          175 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV  254 (352)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence            78999999999999999887899999999999999976543   134556667777777654   345789999999999


Q ss_pred             HHHHHhhccC--CCCceEEEe-cccCCHHHHHHHHHHhC---CCCCC--CC---CCCCCCCceeechHHHHH-hCCccc-
Q 020924          233 EALLLAYEKA--EAEGRYICT-AHMIRARDLVDKLKSLY---PNYNY--PK---SFTEKEDEVMLTSEKLQK-LGWSYR-  299 (319)
Q Consensus       233 ~~~~~~~~~~--~~~~~~~~~-~~~~s~~e~~~~~~~~~---g~~~~--~~---~~~~~~~~~~~d~~k~~~-lg~~~~-  299 (319)
                      ++++.++...  ..+++|+++ +..+|+.|+++.+.+.+   |....  +.   ..+.......+|++|+++ |||+|. 
T Consensus       255 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  334 (352)
T 1sb8_A          255 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKY  334 (352)
T ss_dssp             HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred             HHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCC
Confidence            9999988763  235589876 58999999999999998   73211  11   112223457889999998 999998 


Q ss_pred             cHHHHHHHHHHHHHHc
Q 020924          300 SLEETLVDSVESYKKV  315 (319)
Q Consensus       300 ~~~~~l~~~~~~~~~~  315 (319)
                      +++++|+++++||+++
T Consensus       335 ~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          335 DVSAGVALAMPWYIMF  350 (352)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            9999999999999875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.5e-46  Score=328.79  Aligned_cols=301  Identities=19%  Similarity=0.220  Sum_probs=233.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++|+|||||||||||++++++|+++|  ++|++++|+........+..+.. ..+++++.+|++|.+.+.+++.++|+|
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED-DPRYTFVKGDVADYELVKELVRKVDGV   79 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHTCSEE
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhcc-CCceEEEEcCCCCHHHHHHHhhCCCEE
Confidence            345789999999999999999999986  99999999753211122222211 357899999999999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV-KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      ||+||........+.+...+++|+.++.+++++|.+.+. ++|||+||.++|+..    ...+++|+++..+      .+
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~----~~~~~~E~~~~~~------~~  149 (336)
T 2hun_A           80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDI----LKGSFTENDRLMP------SS  149 (336)
T ss_dssp             EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCC----SSSCBCTTBCCCC------CS
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCC----CCCCcCCCCCCCC------CC
Confidence            999997542111122367899999999999999998865 799999997765433    2457888876554      67


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~  236 (319)
                      +|+.+|.++|.+++.++.+++++++++||+.+||+..... ..+..++.....+.+..   .+++.++|+|++|+|++++
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  228 (336)
T 2hun_A          150 PYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIE  228 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHH
Confidence            8999999999999999888899999999999999986432 34456666777766544   3447899999999999999


Q ss_pred             HhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC-CC---CCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHH
Q 020924          237 LAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN-YP---KSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSV  309 (319)
Q Consensus       237 ~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-~~---~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~  309 (319)
                      .+++....+++|++++ ..+|+.|+++.+.+.+|... ..   ...+.......+|++|+++ |||+|. +++++|++++
T Consensus       229 ~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~  308 (336)
T 2hun_A          229 LVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTI  308 (336)
T ss_dssp             HHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHH
T ss_pred             HHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence            9998765556898875 78999999999999998421 11   1111222346789999998 999998 9999999999


Q ss_pred             HHHHHc
Q 020924          310 ESYKKV  315 (319)
Q Consensus       310 ~~~~~~  315 (319)
                      +||+++
T Consensus       309 ~~~~~~  314 (336)
T 2hun_A          309 DWYLKN  314 (336)
T ss_dssp             HHHHHT
T ss_pred             HHHHhC
Confidence            999875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=9.2e-47  Score=332.97  Aligned_cols=291  Identities=20%  Similarity=0.197  Sum_probs=236.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .++|+|||||||||||++++++|+++|++|++++|+...             .+++++.+|++|.+.+.++++++|+|||
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIMGVSAVLH   83 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence            457899999999999999999999999999999998763             3678899999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +|+......  ..+...+++|+.++.+++++|++.++++|||+||.++|+...  +...+++|+++..|      .++|+
T Consensus        84 ~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~--~~~~~~~E~~~~~~------~~~Y~  153 (347)
T 4id9_A           84 LGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENR--PEFLPVTEDHPLCP------NSPYG  153 (347)
T ss_dssp             CCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTS--CSSSSBCTTSCCCC------CSHHH
T ss_pred             CCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCC--CCCCCcCCCCCCCC------CChHH
Confidence            999765431  223678999999999999999999999999999977665421  13578899887655      78899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCccc-------------CCCCCCC----------CCccHHHHHHHHhcCccc--
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVL-------------GPLLQSK----------VNTSSLVLIKLLKEGYES--  217 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~-------------G~~~~~~----------~~~~~~~~~~~~~~~~~~--  217 (319)
                      .+|.++|.+++.++++++++++++||+.+|             |+.....          ...+..++.....+.+..  
T Consensus       154 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (347)
T 4id9_A          154 LTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHIL  233 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEe
Confidence            999999999999998889999999999999             7653321          234455666666776644  


Q ss_pred             -cCCccccc----ccHHHHHHHHHHhhccCC-CCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCCCCCCCCceeechHH
Q 020924          218 -LENKLRMI----VDVRDVAEALLLAYEKAE-AEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEK  290 (319)
Q Consensus       218 -~~~~~~~~----i~v~D~a~~~~~~~~~~~-~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~k  290 (319)
                       .+++.++|    +|++|+|++++.+++++. .+++||++ +..+|+.|+++.+.+.+|........+.......+|++|
T Consensus       234 g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~d~~k  313 (347)
T 4id9_A          234 ARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDGVYYHTSNER  313 (347)
T ss_dssp             EECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCCCBCCBCCHH
T ss_pred             CCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcccccccCHHH
Confidence             34578899    999999999999999873 45689876 588999999999999998421111122233368899999


Q ss_pred             HHH-hCCccc-cHHHHHHHHHHHHHHcC
Q 020924          291 LQK-LGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       291 ~~~-lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                      +++ |||+|. +++++|+++++||+++.
T Consensus       314 ~~~~lG~~p~~~~~~~l~~~~~~~~~~~  341 (347)
T 4id9_A          314 IRNTLGFEAEWTMDRMLEEAATARRQRL  341 (347)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            998 999999 99999999999998753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=4.3e-46  Score=330.56  Aligned_cols=296  Identities=18%  Similarity=0.118  Sum_probs=235.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHH--CCCeEEEEEcCCChhhH--------HHHHhhhccCCCeEEEEccCCChhhH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLS--RDYFVHGTAREPSDEKN--------ARLYELEKASENLKLFKADLLDYDSV   70 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (319)
                      |+|++|+|||||||||||++++++|++  +|++|++++|+......        .....  ....+++++.+|++|.+.+
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKN--LIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGG--GTTCCSEEEECCTTCHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhh--ccccCceEEECCCCCHHHH
Confidence            456789999999999999999999999  99999999997652100        00011  1134679999999999999


Q ss_pred             HHH-hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           71 KSA-IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        71 ~~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      ..+ ..++|+|||+||.... . ...+...+++|+.++.+++++|++.+++ |||+||.++|+ ..    ..+++|+++.
T Consensus        84 ~~~~~~~~D~vih~A~~~~~-~-~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg-~~----~~~~~E~~~~  155 (362)
T 3sxp_A           84 RRLEKLHFDYLFHQAAVSDT-T-MLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYG-NT----KAPNVVGKNE  155 (362)
T ss_dssp             HHHTTSCCSEEEECCCCCGG-G-CCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGC-SC----CSSBCTTSCC
T ss_pred             HHhhccCCCEEEECCccCCc-c-ccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhC-CC----CCCCCCCCCC
Confidence            999 7899999999996543 1 2344789999999999999999999986 99999966554 32    3388898876


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccc---cCCccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYES---LENKLR  223 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~  223 (319)
                      .|      .++|+.+|.++|.+++.++.+  ++++++||+++|||+....   ...+..++.....+.+..   .|++.+
T Consensus       156 ~p------~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (362)
T 3sxp_A          156 SP------ENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLR  227 (362)
T ss_dssp             CC------SSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEE
T ss_pred             CC------CChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEE
Confidence            55      788999999999999999875  8999999999999986543   145566777777777655   344889


Q ss_pred             ccccHHHHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCCC---CCCCCceeechHHHHH-hCCcc
Q 020924          224 MIVDVRDVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKSF---TEKEDEVMLTSEKLQK-LGWSY  298 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~---~~~~~~~~~d~~k~~~-lg~~~  298 (319)
                      +|+|++|+|++++.+++.+.. |+|+++ +..+|+.|+++.+.+.+|...+....   ........+|++|+++ |||+|
T Consensus       228 ~~i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  306 (362)
T 3sxp_A          228 DFVYIEDVIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTP  306 (362)
T ss_dssp             ECEEHHHHHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHCCCEEECCC-------CCCCBCCHHHHHHHCCCC
T ss_pred             ccEEHHHHHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcCCCceEECCCCCcCcccceecCHHHHHHHhCCCC
Confidence            999999999999999998765 499876 58999999999999999832211111   2233568899999977 99999


Q ss_pred             c-cHHHHHHHHHHHHHHc
Q 020924          299 R-SLEETLVDSVESYKKV  315 (319)
Q Consensus       299 ~-~~~~~l~~~~~~~~~~  315 (319)
                      . +++++|+++++||+++
T Consensus       307 ~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          307 LYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             CCCHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            9 9999999999999754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.4e-47  Score=337.55  Aligned_cols=301  Identities=18%  Similarity=0.274  Sum_probs=236.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC-ChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL-DYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~v   80 (319)
                      |+||+|||||||||||++++++|+++ |++|++++|+......  +.    ...+++++.+|++ |.+.+.++++++|+|
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~----~~~~v~~~~~Dl~~d~~~~~~~~~~~d~V   95 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGD--LV----KHERMHFFEGDITINKEWVEYHVKKCDVI   95 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGG--GG----GSTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhh--hc----cCCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence            67789999999999999999999998 9999999998764211  11    1258999999999 999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccc-ccCCc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC-RTTNN  159 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~  159 (319)
                      ||+|+..........+...+++|+.++.+++++|++.+ ++|||+||.++|+..    ...+++|+++..+..+ ..|.+
T Consensus        96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~----~~~~~~e~~~~~~~~p~~~p~~  170 (372)
T 3slg_A           96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMC----ADEQFDPDASALTYGPINKPRW  170 (372)
T ss_dssp             EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSC----CCSSBCTTTCCEEECCTTCTTH
T ss_pred             EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCC----CCCCCCccccccccCCCCCCCC
Confidence            99999765421112236788999999999999999999 899999996655433    3567778775422111 13467


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-------CCccHHHHHHHHhcCccc---cCCcccccccHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-------VNTSSLVLIKLLKEGYES---LENKLRMIVDVR  229 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~  229 (319)
                      +|+.+|.++|.+++.++++ +++++++||+++||++....       ...+..++..+..+.+..   .|++.++|+|++
T Consensus       171 ~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  249 (372)
T 3slg_A          171 IYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVD  249 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHH
Confidence            8999999999999999887 99999999999999986531       235566777888887665   345889999999


Q ss_pred             HHHHHHHHhhccCC---CCceEEEec--ccCCHHHHHHHHHHhCCCCCCC------CC------------CCCCCCceee
Q 020924          230 DVAEALLLAYEKAE---AEGRYICTA--HMIRARDLVDKLKSLYPNYNYP------KS------------FTEKEDEVML  286 (319)
Q Consensus       230 D~a~~~~~~~~~~~---~~~~~~~~~--~~~s~~e~~~~~~~~~g~~~~~------~~------------~~~~~~~~~~  286 (319)
                      |+|++++.+++++.   .+++|++++  ..+|+.|+++.+.+.+|.....      ..            .........+
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (372)
T 3slg_A          250 DGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVP  329 (372)
T ss_dssp             HHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCB
T ss_pred             HHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeec
Confidence            99999999999874   456898876  5999999999999998731100      00            0012345788


Q ss_pred             chHHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          287 TSEKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       287 d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |++|+++ |||+|+ +++++|+++++||+++
T Consensus       330 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          330 KIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             CCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999998 999999 9999999999999854

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=8.7e-46  Score=326.84  Aligned_cols=304  Identities=16%  Similarity=0.219  Sum_probs=235.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |+ .||+|||||||||||++++++|+++  |++|++++|+........+..+.  ..+++++.+|++|.+++.++++++|
T Consensus         1 Ms-~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d   77 (348)
T 1oc2_A            1 MS-QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAAKAD   77 (348)
T ss_dssp             ---CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCS
T ss_pred             CC-cCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCC
Confidence            55 2579999999999999999999998  89999999975322112222221  2578999999999999999999999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC--------CCCCcccCCCCCCC
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPR--------WPKGQIMDETCWSD  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~--------~~~~~~~~E~~~~~  150 (319)
                      +|||+|+..........+...+++|+.++.+++++|++.++ +|||+||.++|+....        .+...+++|+++..
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (348)
T 1oc2_A           78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN  156 (348)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC
Confidence            99999997542111122367899999999999999999888 9999999776643210        00125778877654


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~  227 (319)
                      +      .++|+.+|.++|.+++.++.+++++++++||+.+||+..... ..+..++.....+.+..   .+++.++|+|
T Consensus       157 ~------~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  229 (348)
T 1oc2_A          157 P------SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIH  229 (348)
T ss_dssp             C------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred             C------CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEE
Confidence            4      678999999999999999888899999999999999986432 34556667777776554   3457899999


Q ss_pred             HHHHHHHHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC--CC--CCCCCCCCceeechHHHHH-hCCccc-c
Q 020924          228 VRDVAEALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN--YP--KSFTEKEDEVMLTSEKLQK-LGWSYR-S  300 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~--~~--~~~~~~~~~~~~d~~k~~~-lg~~~~-~  300 (319)
                      ++|+|++++.+++.+..+++|++++ ..+|+.|+++.+.+.+|...  +.  ...+.......+|++|+++ |||+|+ +
T Consensus       230 v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  309 (348)
T 1oc2_A          230 TNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFT  309 (348)
T ss_dssp             HHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCC
T ss_pred             HHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCCC
Confidence            9999999999998765556898775 78999999999999998432  11  1111222346799999998 999998 7


Q ss_pred             -HHHHHHHHHHHHHHc
Q 020924          301 -LEETLVDSVESYKKV  315 (319)
Q Consensus       301 -~~~~l~~~~~~~~~~  315 (319)
                       ++++|+++++|++++
T Consensus       310 ~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          310 DFSEGLEETIQWYTDN  325 (348)
T ss_dssp             CHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHh
Confidence             999999999999875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.1e-45  Score=322.98  Aligned_cols=298  Identities=22%  Similarity=0.253  Sum_probs=234.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC---C---CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR---D---YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |+|||||||||||++++++|+++   |   ++|++++|+........+..+. ...+++++.+|++|.+++.+++.++|+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~   79 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLARELRGVDA   79 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence            47999999999999999999997   8   9999999975321111222221 135789999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      |||+|+..........+...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++..|      .+
T Consensus        80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~----~~~~~~E~~~~~~------~~  149 (337)
T 1r6d_A           80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSI----DSGSWTESSPLEP------NS  149 (337)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCC----SSSCBCTTSCCCC------CS
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCC----CCCCCCCCCCCCC------CC
Confidence            9999986542111122367899999999999999999999999999997765433    2457788876554      67


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~  236 (319)
                      +|+.+|.++|.+++.++++++++++++||+.+||+..... ..+..++.....+.+..   .+++.++|+|++|+|++++
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  228 (337)
T 1r6d_A          150 PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHH
Confidence            8999999999999999888899999999999999986432 34556667777776544   3457899999999999999


Q ss_pred             HhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC--CC--CCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHH
Q 020924          237 LAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN--YP--KSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSV  309 (319)
Q Consensus       237 ~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~--~~--~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~  309 (319)
                      .+++.+..+++|++++ ..+|+.|+++.+.+.+|...  +.  ...+.....+.+|++|+++ |||+|. +++++|++++
T Consensus       229 ~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~  308 (337)
T 1r6d_A          229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTV  308 (337)
T ss_dssp             HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHH
T ss_pred             HHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence            9998765556898875 78999999999999988421  11  1111122346799999998 999998 9999999999


Q ss_pred             HHHHHc
Q 020924          310 ESYKKV  315 (319)
Q Consensus       310 ~~~~~~  315 (319)
                      +||+++
T Consensus       309 ~~~~~~  314 (337)
T 1r6d_A          309 RWYREN  314 (337)
T ss_dssp             HHHHHC
T ss_pred             HHHHhc
Confidence            999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-45  Score=321.68  Aligned_cols=300  Identities=20%  Similarity=0.171  Sum_probs=234.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   81 (319)
                      .+|+|||||||||||++++++|+++|++|++++|+........+..+. ...+++++.+|++|.+++.+++++  +|+||
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            357999999999999999999999999999999986642222222221 124689999999999999999985  69999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV-KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |+|+..........+...+++|+.++.+++++|++.++ ++|||+||.++|+..    ...+++|+++..|      .++
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~----~~~~~~E~~~~~p------~~~  161 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLI----QAERQDENTPFYP------RSP  161 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSC----SSSSBCTTSCCCC------CSH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCC----CCCCCCcccCCCC------CCh
Confidence            99996543211223478899999999999999999886 899999997765543    2457888887655      678


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc----cCCcccccccHHHHHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES----LENKLRMIVDVRDVAEA  234 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~D~a~~  234 (319)
                      |+.+|.++|.+++.++++++++++++||+++||++.....  ..+..++.+...+....    .+++.++|+|++|+|++
T Consensus       162 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a  241 (335)
T 1rpn_A          162 YGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA  241 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHH
Confidence            9999999999999998888999999999999999764332  12344555666665322    34588999999999999


Q ss_pred             HHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCC-----CCC--CCCCCCCceeechHHHHH-hCCccc-cHHHH
Q 020924          235 LLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYN-----YPK--SFTEKEDEVMLTSEKLQK-LGWSYR-SLEET  304 (319)
Q Consensus       235 ~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~-----~~~--~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~  304 (319)
                      ++.+++++. .++||++ +..+|+.|+++.+.+.+|...     +..  ..+.......+|++|+++ |||+|. +++++
T Consensus       242 ~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~  320 (335)
T 1rpn_A          242 MWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDEL  320 (335)
T ss_dssp             HHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHH
T ss_pred             HHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHH
Confidence            999998765 4789776 578999999999999998421     111  111222457789999998 999998 99999


Q ss_pred             HHHHHHHHHHc
Q 020924          305 LVDSVESYKKV  315 (319)
Q Consensus       305 l~~~~~~~~~~  315 (319)
                      |+++++|++++
T Consensus       321 l~~~~~~~~~~  331 (335)
T 1rpn_A          321 IRMMVEADLRR  331 (335)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=2.8e-45  Score=320.03  Aligned_cols=292  Identities=22%  Similarity=0.283  Sum_probs=231.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   81 (319)
                      ++|+|||||||||||++++++|+++|++|++++|+... ..     +     +++++.+|++|.+++.+++++  +|+||
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----P-----NVEMISLDIMDSQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----T-----TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----c-----eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            46899999999999999999999999999999998653 11     1     578999999999999999986  99999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |+||........+.+...+++|+.++.+++++|++. ++++|||+||.++|+...  +...+++|+++..|      .++
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~--~~~~~~~E~~~~~~------~~~  151 (321)
T 2pk3_A           80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMIL--PEESPVSEENQLRP------MSP  151 (321)
T ss_dssp             ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCC--GGGCSBCTTSCCBC------CSH
T ss_pred             EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCC--CCCCCCCCCCCCCC------CCc
Confidence            999975432112234789999999999999999876 689999999987665331  02467888886554      678


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHh---c--Cccc---cCCcccccccHHHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK---E--GYES---LENKLRMIVDVRDVA  232 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~---~--~~~~---~~~~~~~~i~v~D~a  232 (319)
                      |+.+|.++|.+++.++++++++++++||+++||++.... ..+..++.....   +  .+..   .+++.++|+|++|+|
T Consensus       152 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          152 YGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence            999999999999999888899999999999999986542 234455555555   5  2322   345789999999999


Q ss_pred             HHHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC----CCC-CCCCCCCceeechHHHHH-hCCccc-cHHHH
Q 020924          233 EALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN----YPK-SFTEKEDEVMLTSEKLQK-LGWSYR-SLEET  304 (319)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~----~~~-~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~  304 (319)
                      ++++.+++.+..+++|++++ ..+|+.|+++.+.+.+|...    .|. ..+.......+|++|+++ |||+|+ +++++
T Consensus       231 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~  310 (321)
T 2pk3_A          231 QAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKS  310 (321)
T ss_dssp             HHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred             HHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHH
Confidence            99999998775566898865 79999999999999998421    111 111223558899999998 999999 99999


Q ss_pred             HHHHHHHHHHc
Q 020924          305 LVDSVESYKKV  315 (319)
Q Consensus       305 l~~~~~~~~~~  315 (319)
                      |+++++||+++
T Consensus       311 l~~~~~~~~~~  321 (321)
T 2pk3_A          311 LFEILQSYRQA  321 (321)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHhcC
Confidence            99999999753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=9.8e-46  Score=327.64  Aligned_cols=302  Identities=19%  Similarity=0.170  Sum_probs=234.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   80 (319)
                      |++|+|||||||||||++++++|+++|++|++++|+...... ....+. ...+++++.+|++|.+++.+++++  +|+|
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-LFETAR-VADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-HHHHTT-TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccch-hhHhhc-cCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            457899999999999999999999999999999998654211 111111 135789999999999999999986  8999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      ||+||..........+...+++|+.++.+++++|++.+ +++|||+||.++|+...   ...+++|+++..+      .+
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~---~~~~~~E~~~~~~------~~  155 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE---WIWGYRENEAMGG------YD  155 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC---SSSCBCTTSCBCC------SS
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCC---cCCCCCCCCCCCC------CC
Confidence            99998643211112236789999999999999999886 88999999977655332   1246777765443      67


Q ss_pred             hHHhhHHHHHHHHHHhhhhC---------CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc--CCcccccccH
Q 020924          160 WYCLSKTEAESEALEFGKKT---------GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL--ENKLRMIVDV  228 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~---------~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v  228 (319)
                      +|+.+|.++|.+++.++.++         +++++++||+.+||++.......+..++.....+.+...  +++.++|+|+
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v  235 (357)
T 1rkx_A          156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHV  235 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEET
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeH
Confidence            89999999999999987654         899999999999999764333456677777777776553  4578999999


Q ss_pred             HHHHHHHHHhhcc-----CCCCceEEEec---ccCCHHHHHHHHHHhCCCC-CC--CC-CCCCCCCceeechHHHHH-hC
Q 020924          229 RDVAEALLLAYEK-----AEAEGRYICTA---HMIRARDLVDKLKSLYPNY-NY--PK-SFTEKEDEVMLTSEKLQK-LG  295 (319)
Q Consensus       229 ~D~a~~~~~~~~~-----~~~~~~~~~~~---~~~s~~e~~~~~~~~~g~~-~~--~~-~~~~~~~~~~~d~~k~~~-lg  295 (319)
                      +|+|++++.+++.     ...+++||+++   ..+|+.|+++.+.+.+|.. .+  +. ..+.......+|++|+++ ||
T Consensus       236 ~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  315 (357)
T 1rkx_A          236 LEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLG  315 (357)
T ss_dssp             HHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHhC
Confidence            9999999999874     13456898873   6899999999999998731 11  11 011223457899999998 99


Q ss_pred             Cccc-cHHHHHHHHHHHHHHc
Q 020924          296 WSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       296 ~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |+|. +++++|+++++||+++
T Consensus       316 ~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          316 WHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCcCCcHHHHHHHHHHHHHHH
Confidence            9998 9999999999999864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=8.8e-45  Score=323.93  Aligned_cols=302  Identities=16%  Similarity=0.137  Sum_probs=237.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+++||+|||||||||||++++++|+++|++|++++|+.......       ...+++++.+|++|.+++.++++++|+|
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~~~d~V   97 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTEGVDHV   97 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------ccCCceEEECCCCCHHHHHHHhCCCCEE
Confidence            455678999999999999999999999999999999986542110       1246889999999999999999999999


Q ss_pred             EEecccCCCCCC-CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC-CCCCcccCCCCCCCccccccCC
Q 020924           81 FHIACPAPSTTV-PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPR-WPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        81 i~~a~~~~~~~~-~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      ||+|+....... .+.+...+++|+.++.+++++|++.++++|||+||.++++.... .+...+++|+++.    +..+.
T Consensus        98 ih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~----~~~~~  173 (379)
T 2c5a_A           98 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQ  173 (379)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS----SBCCS
T ss_pred             EECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC----CCCCC
Confidence            999997543111 23347889999999999999999999999999999776553321 1112456776522    12346


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCc-cc---cCCcccccccHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGY-ES---LENKLRMIVDVRDV  231 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~---~~~~~~~~i~v~D~  231 (319)
                      ++|+.+|.++|.+++.++++++++++++||+.+||+......   ..+..++.....+.+ +.   .+++.++|+|++|+
T Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv  253 (379)
T 2c5a_A          174 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC  253 (379)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHH
Confidence            789999999999999998878999999999999999764321   245667777777765 32   34578999999999


Q ss_pred             HHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC-C--CCCCCceeechHHHHH-hCCccc-cHHHHH
Q 020924          232 AEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKS-F--TEKEDEVMLTSEKLQK-LGWSYR-SLEETL  305 (319)
Q Consensus       232 a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~-~--~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l  305 (319)
                      |++++.+++++ .+++|+++ +..+|+.|+++.+.+.+|.. .+.. .  +.......+|++|+++ |||+|+ +++++|
T Consensus       254 a~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l  331 (379)
T 2c5a_A          254 VEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKK-LPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGL  331 (379)
T ss_dssp             HHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCC-CCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHH
T ss_pred             HHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCC-CceeeCCCCCCcccccCCHHHHHHHhCCCCCCCHHHHH
Confidence            99999999876 45688776 48999999999999999842 1111 1  1123457899999998 999998 999999


Q ss_pred             HHHHHHHHHc
Q 020924          306 VDSVESYKKV  315 (319)
Q Consensus       306 ~~~~~~~~~~  315 (319)
                      +++++|++++
T Consensus       332 ~~~~~~~~~~  341 (379)
T 2c5a_A          332 RITYFWIKEQ  341 (379)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999865

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=7.3e-45  Score=318.64  Aligned_cols=294  Identities=18%  Similarity=0.234  Sum_probs=228.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      ||+|||||||||||++++++|+++|++|++++|+.....    ..+   ..+++++.+|++|.+.+.++++  ++|+|||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE----DAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGS---CTTSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch----hhc---CCCcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            478999999999999999999999999999998765321    111   1368899999999999999998  8999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +|+........+.+...+++|+.++.+++++|++.++++|||+||.++++..    ...+++|+++..|      .++|+
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~----~~~~~~E~~~~~~------~~~Y~  143 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEV----DVDLITEETMTNP------TNTYG  143 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSC----SSSSBCTTSCCCC------SSHHH
T ss_pred             CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCC----CCCCCCcCCCCCC------CChHH
Confidence            9986543111122367899999999999999999999999999997665432    3567889887654      68899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCC--------CCCccHHHHHHHHhcCc-cc---------cCCcccc
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQS--------KVNTSSLVLIKLLKEGY-ES---------LENKLRM  224 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~-~~---------~~~~~~~  224 (319)
                      .+|.++|.+++.++++++++++++||+++||+....        ....+..++.....+.+ +.         .|++.++
T Consensus       144 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  223 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRD  223 (330)
T ss_dssp             HHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEe
Confidence            999999999999988889999999999999996321        11223333333332222 21         2457889


Q ss_pred             cccHHHHHHHHHHhhccCCC---CceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC----CCCCCCceeechHHHHH-hC
Q 020924          225 IVDVRDVAEALLLAYEKAEA---EGRYICT-AHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDEVMLTSEKLQK-LG  295 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~----~~~~~~~~~~d~~k~~~-lg  295 (319)
                      |+|++|+|++++.+++++..   +++||++ +..+|+.|+++.+.+.+|. +.+..    .........+|++|+++ ||
T Consensus       224 ~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  302 (330)
T 2c20_A          224 YIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH-EIPAEVAPRRAGDPARLVASSQKAKEKLG  302 (330)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS-CCCEEEECCCSSCCSEECBCCHHHHHHHC
T ss_pred             eEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCCcccccccCHHHHHHHhC
Confidence            99999999999999986432   4589876 5899999999999999984 22211    12223468899999988 99


Q ss_pred             Cccc--cHHHHHHHHHHHHHHcC
Q 020924          296 WSYR--SLEETLVDSVESYKKVG  316 (319)
Q Consensus       296 ~~~~--~~~~~l~~~~~~~~~~~  316 (319)
                      |+|+  +++++|+++++|++++.
T Consensus       303 ~~p~~~~l~~~l~~~~~~~~~~~  325 (330)
T 2c20_A          303 WDPRYVNVKTIIEHAWNWHQKQP  325 (330)
T ss_dssp             CCCSCCCHHHHHHHHHHHHHHCS
T ss_pred             CCCccCCHHHHHHHHHHHHHHhh
Confidence            9997  89999999999998864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1.5e-45  Score=328.69  Aligned_cols=300  Identities=21%  Similarity=0.189  Sum_probs=229.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++||+|||||||||||++++++|+++| ++|++++|+..... ..   +. ...+++++.+|++|.+.+.++++++|+||
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~---l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK-IN---VP-DHPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG-GG---SC-CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch-hh---cc-CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            567899999999999999999999999 99999999765321 11   11 13578999999999999999999999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCcccC--CCCCCCccccc-cC
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWPKGQIMD--ETCWSDKEYCR-TT  157 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~--E~~~~~~~~~~-~~  157 (319)
                      |+|+..........+...+++|+.++.+++++|++. ++++|||+||.++|+..    ...+++  |+++..|   . .+
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~----~~~~~~~~E~~~~~~---~~~~  177 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEK----TFDDAKATEETDIVS---LHNN  177 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC------------------CCCCCCC---SSCC
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCC----CCCCcCccccccccc---ccCC
Confidence            999875432111123678999999999999999998 89999999997665433    244677  7762111   1 23


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCC---------CCC---CCccHHHHHHHHhcCccc---cCCcc
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLL---------QSK---VNTSSLVLIKLLKEGYES---LENKL  222 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~---------~~~---~~~~~~~~~~~~~~~~~~---~~~~~  222 (319)
                      .++|+.+|.++|.+++.++++++++++++||+.+||+..         ...   ...+..++..+..+.+..   .+++.
T Consensus       178 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~  257 (377)
T 2q1s_A          178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT  257 (377)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence            678999999999999999887899999999999999976         210   234566777777777654   34588


Q ss_pred             cccccHHHHHHH-HHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCC-CCC--CCCCCCCC-ceeechHHHHH-hC
Q 020924          223 RMIVDVRDVAEA-LLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNY-NYP--KSFTEKED-EVMLTSEKLQK-LG  295 (319)
Q Consensus       223 ~~~i~v~D~a~~-~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~-~~~--~~~~~~~~-~~~~d~~k~~~-lg  295 (319)
                      ++|+|++|+|++ ++.+++.+. .|+|++++ ..+|+.|+++.+.+.+|.. .+.  ...+.... ...+|++|+++ ||
T Consensus       258 ~~~i~v~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~lG  336 (377)
T 2q1s_A          258 RDFIFVEDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELG  336 (377)
T ss_dssp             ECCEEHHHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHHHC
T ss_pred             EeeEEHHHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHHHHcC
Confidence            999999999999 999998766 44898765 8999999999999999842 111  11122234 68899999987 99


Q ss_pred             Cccc-cHHHHHHHHHHHHHHc
Q 020924          296 WSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       296 ~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |+|. +++++|+++++||+++
T Consensus       337 ~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          337 FSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHHh
Confidence            9998 9999999999999875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-45  Score=321.97  Aligned_cols=304  Identities=17%  Similarity=0.183  Sum_probs=229.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~   82 (319)
                      ||+|||||||||||++++++|+++|++|++++|+...........+.. ..+++++.+|++|.+++.+++++  +|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            468999999999999999999999999999998643222222222221 24689999999999999999988  999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCC------------CCcccCCCCCC
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWP------------KGQIMDETCWS  149 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~------------~~~~~~E~~~~  149 (319)
                      +|+........+.+...+++|+.++.+++++|++.+++ +|||+||.++|+.....+            ...+++|+++.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~  159 (347)
T 1orr_A           80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  159 (347)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC
Confidence            99975421111223678999999999999999998885 999999977655332100            01224555544


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcC-----ccc---cC
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEG-----YES---LE  219 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~-----~~~---~~  219 (319)
                      .      +.++|+.+|.++|.+++.++++++++++++||+.+||+......  ..+..++.+...+.     +..   .|
T Consensus       160 ~------~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  233 (347)
T 1orr_A          160 D------FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG  233 (347)
T ss_dssp             C------CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred             C------CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCC
Confidence            3      37889999999999999998888999999999999999764321  23455666666655     333   34


Q ss_pred             CcccccccHHHHHHHHHHhhcc-CCC-CceEEEecc---cCCHHHHHHHHHHhCCCCC-CC--CCCCCCCCceeechHHH
Q 020924          220 NKLRMIVDVRDVAEALLLAYEK-AEA-EGRYICTAH---MIRARDLVDKLKSLYPNYN-YP--KSFTEKEDEVMLTSEKL  291 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~-~~~-~~~~~~~~~---~~s~~e~~~~~~~~~g~~~-~~--~~~~~~~~~~~~d~~k~  291 (319)
                      ++.++|+|++|+|++++.+++. ... +.+|++++.   .+|+.|+++.+.+.+|... +.  ...........+|++|+
T Consensus       234 ~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~  313 (347)
T 1orr_A          234 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKI  313 (347)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHH
T ss_pred             cceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCHHHH
Confidence            5889999999999999999985 222 348988763   4999999999999998421 10  11122334578999999


Q ss_pred             HH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          292 QK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       292 ~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      ++ |||+|. +++++|+++++|++++
T Consensus       314 ~~~lG~~p~~~~~e~l~~~~~~~~~~  339 (347)
T 1orr_A          314 TNAIDWSPKVSAKDGVQKMYDWTSSI  339 (347)
T ss_dssp             HHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             HHHHCCCccCCHHHHHHHHHHHHHHH
Confidence            88 999997 9999999999999876

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=1.7e-45  Score=320.11  Aligned_cols=291  Identities=24%  Similarity=0.286  Sum_probs=229.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+|||||||||||++++++|+++|++|++++|......    ..+   ..+++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   73 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR----ENV---PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQ   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG----GGS---CTTCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch----hhc---ccCeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            47999999999999999999999999999998543211    011   1367888999999999999998  79999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccC-CCCCCCcccCCCCCCCccccccCCchHH
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLN-PRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      |+........+.+...+++|+.++.+++++|++.++++||++||.+.+|+. .   ...+++|+++..|      .++|+
T Consensus        74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~---~~~~~~E~~~~~~------~~~Y~  144 (311)
T 2p5y_A           74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVP---EGERAEETWPPRP------KSPYA  144 (311)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCC---TTCCBCTTSCCCC------CSHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCC---CCCCcCCCCCCCC------CChHH
Confidence            986542111122367899999999999999999999999999997344443 2   2457788876544      67899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc-c-----C--CcccccccHHHHH
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES-L-----E--NKLRMIVDVRDVA  232 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~-~-----~--~~~~~~i~v~D~a  232 (319)
                      .+|.++|.+++.++++++++++++||+++|||+.....  ..+..++.++..+.+.. .     +  ++.++|+|++|+|
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  224 (311)
T 2p5y_A          145 ASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVA  224 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHH
Confidence            99999999999998888999999999999999765431  23455666666776543 3     3  4778999999999


Q ss_pred             HHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceeechHHHHHhCCccc-cHHHHHH
Q 020924          233 EALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVMLTSEKLQKLGWSYR-SLEETLV  306 (319)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~  306 (319)
                      ++++.+++.+  +++|+++ +..+|+.|+++.+.+.+|.. .+.    ..........+|++|+++|||+|. +++++|+
T Consensus       225 ~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~  301 (311)
T 2p5y_A          225 EAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKA-PEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIR  301 (311)
T ss_dssp             HHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHH
T ss_pred             HHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-CCceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHH
Confidence            9999999875  5689876 58899999999999998742 111    112223568899999988999998 9999999


Q ss_pred             HHHHHHHHc
Q 020924          307 DSVESYKKV  315 (319)
Q Consensus       307 ~~~~~~~~~  315 (319)
                      ++++|++++
T Consensus       302 ~~~~~~~~~  310 (311)
T 2p5y_A          302 LTVDHFRGA  310 (311)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHhh
Confidence            999999753

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2e-44  Score=317.36  Aligned_cols=298  Identities=24%  Similarity=0.323  Sum_probs=229.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +|+|||||||||||++++++|+++|++|++++|+.....  .+.     ..+++++.+|++|.+++.++++++|+|||+|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~-----~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a   85 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ--RLA-----YLEPECRVAEMLDHAGLERALRGLDGVIFSA   85 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG--GGG-----GGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh--hhc-----cCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            468999999999999999999999999999999876421  111     1368899999999999999999999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +.... . .+.+...+++|+.++.+++++|++.++++|||+||.++++..+.  ...+ +|+++..|...  ..+.|+.+
T Consensus        86 ~~~~~-~-~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~--~~~~-~E~~~~~p~~~--~~~~Y~~s  158 (342)
T 2x4g_A           86 GYYPS-R-PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQ--GLPG-HEGLFYDSLPS--GKSSYVLC  158 (342)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTT--SSCB-CTTCCCSSCCT--TSCHHHHH
T ss_pred             ccCcC-C-CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCC--CCCC-CCCCCCCcccc--ccChHHHH
Confidence            96542 1 23347889999999999999999999999999999877654321  1134 78876554110  15789999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      |.++|.+++.+++. +++++++||+.+||+..... . +..++.....+.....+++.++|+|++|+|++++.+++++..
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  235 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI  235 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC
Confidence            99999999999877 99999999999999976211 2 345566666665444467889999999999999999987766


Q ss_pred             CceEEEecccCCHHHHHHHHHHhCCCCC---CCCCC---------------C-------C----CCCceeechHHHHH-h
Q 020924          245 EGRYICTAHMIRARDLVDKLKSLYPNYN---YPKSF---------------T-------E----KEDEVMLTSEKLQK-L  294 (319)
Q Consensus       245 ~~~~~~~~~~~s~~e~~~~~~~~~g~~~---~~~~~---------------~-------~----~~~~~~~d~~k~~~-l  294 (319)
                      +++|++++..+|+.|+++.+.+.+|...   +|...               .       .    ......+|++|+++ |
T Consensus       236 g~~~~v~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  315 (342)
T 2x4g_A          236 GERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREEL  315 (342)
T ss_dssp             TCEEEECCEEEEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHH
T ss_pred             CceEEEcCCcccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhC
Confidence            6689887633999999999999987421   11110               0       0    01357799999998 9


Q ss_pred             CC-ccccHHHHHHHHHHHHHHcCCCC
Q 020924          295 GW-SYRSLEETLVDSVESYKKVGILN  319 (319)
Q Consensus       295 g~-~~~~~~~~l~~~~~~~~~~~~~~  319 (319)
                      || +|.+++++++++++||+++|.++
T Consensus       316 G~~~p~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          316 GFFSTTALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            99 99999999999999999999875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.5e-45  Score=319.06  Aligned_cols=290  Identities=12%  Similarity=0.134  Sum_probs=227.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   80 (319)
                      +|+|||||||||||++++++|+++  |++|++++|+.....  ..       .+++++.+|++|.+++.++++  ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~~D~~d~~~~~~~~~~~~~d~v   72 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VV-------NSGPFEVVNALDFNQIEHLVEVHKITDI   72 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HH-------HSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--cc-------CCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence            368999999999999999999998  899999999866421  11       256789999999999999998  89999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+|+........+ +...+++|+.++.+++++|++.++++|||+||.++|+...   ...+.+|+++..|      .++
T Consensus        73 ih~a~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~---~~~~~~e~~~~~~------~~~  142 (312)
T 2yy7_A           73 YLMAALLSATAEKN-PAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTT---PKENTPQYTIMEP------STV  142 (312)
T ss_dssp             EECCCCCHHHHHHC-HHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTS---CSSSBCSSCBCCC------CSH
T ss_pred             EECCccCCCchhhC-hHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCC---CCCCccccCcCCC------Cch
Confidence            99998653211123 3678999999999999999999999999999977665432   2356777765544      788


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccc---cCCcccccccHHHHHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEA  234 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~  234 (319)
                      |+.+|.++|.+++.++++++++++++||+++||+...+..   ......+.+...+....   .+++.++|+|++|+|++
T Consensus       143 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  222 (312)
T 2yy7_A          143 YGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDA  222 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHH
Confidence            9999999999999998878999999999999997643321   12333334444444332   34588999999999999


Q ss_pred             HHHhhccCCC----CceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCC-----CCCceeechHHHHH-hCCccc-cHHH
Q 020924          235 LLLAYEKAEA----EGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE-----KEDEVMLTSEKLQK-LGWSYR-SLEE  303 (319)
Q Consensus       235 ~~~~~~~~~~----~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~-----~~~~~~~d~~k~~~-lg~~~~-~~~~  303 (319)
                      ++.+++++..    +++||+++..+|+.|+++.+.+.+|...++.....     ......+|++|+++ |||+|+ ++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~  302 (312)
T 2yy7_A          223 TINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLES  302 (312)
T ss_dssp             HHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHH
T ss_pred             HHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHH
Confidence            9999987653    26899888899999999999999984322211110     11235789999998 999998 9999


Q ss_pred             HHHHHHHHHH
Q 020924          304 TLVDSVESYK  313 (319)
Q Consensus       304 ~l~~~~~~~~  313 (319)
                      +|+++++||+
T Consensus       303 ~l~~~~~~~k  312 (312)
T 2yy7_A          303 MTKDMIEHLS  312 (312)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            9999999984

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=5.8e-45  Score=312.98  Aligned_cols=272  Identities=15%  Similarity=0.095  Sum_probs=218.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-cceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-CNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~vi   81 (319)
                      |+||+||||| +||||++++++|+++|++|++++|+.+..           ..+++++.+|++|.+.+.+++++ +|+||
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   68 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVHLRPEILV   68 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGGGCCSEEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhcCCCCEEE
Confidence            4467999999 59999999999999999999999987631           35789999999999999999987 99999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      |+|+....    ++ ...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++..|      .++|
T Consensus        69 h~a~~~~~----~~-~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~----~~~~~~E~~~~~p------~~~Y  133 (286)
T 3gpi_A           69 YCVAASEY----SD-EHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQE----VEEWLDEDTPPIA------KDFS  133 (286)
T ss_dssp             ECHHHHHH----C------CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCC----CSSEECTTSCCCC------CSHH
T ss_pred             EeCCCCCC----CH-HHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCC----CCCCCCCCCCCCC------CChh
Confidence            99986432    23 67889999999999999999999999999997665443    3577899987665      7889


Q ss_pred             HhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc-ccCCcccccccHHHHHHHHHHhhc
Q 020924          162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE-SLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      +.+|.++|.+ +.+     ++++++||+++||+...       .++..+.. ... ..++..++|+|++|+|++++.+++
T Consensus       134 ~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~  199 (286)
T 3gpi_A          134 GKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQ  199 (286)
T ss_dssp             HHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHH-Hhc-----CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHh
Confidence            9999999998 553     89999999999999753       23444444 222 245688999999999999999999


Q ss_pred             cC---CCCceEEEec-ccCCHHHHHHHHHHhCCCCCCCCCCCCCCCceeechHHHHHhCCccc--cHHHHHHHHHHHHHH
Q 020924          241 KA---EAEGRYICTA-HMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYR--SLEETLVDSVESYKK  314 (319)
Q Consensus       241 ~~---~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~--~~~~~l~~~~~~~~~  314 (319)
                      ++   ..+++|++++ ..+|+.|+++.+.+.+|........+.......+|++|++.|||+|+  +|+++|+++++|+..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~  279 (286)
T 3gpi_A          200 QRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATPPVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE  279 (286)
T ss_dssp             HHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCCCBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC
T ss_pred             hhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCcccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhc
Confidence            83   4566898874 88999999999999998422222222344678899999988999998  599999999999875


Q ss_pred             c
Q 020924          315 V  315 (319)
Q Consensus       315 ~  315 (319)
                      +
T Consensus       280 ~  280 (286)
T 3gpi_A          280 G  280 (286)
T ss_dssp             -
T ss_pred             c
Confidence            4

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.5e-45  Score=317.44  Aligned_cols=291  Identities=13%  Similarity=0.107  Sum_probs=226.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cce
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNG   79 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   79 (319)
                      +|+||+|||||||||||++++++|+++|+      +....            ...++++.+|++|.+.+.+++++  +|+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------WVFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence            46789999999999999999999999998      11110            12344557899999999999987  999


Q ss_pred             EEEecccCCCC-CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           80 VFHIACPAPST-TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        80 vi~~a~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      |||+|+..... ...+.+...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++...  ++.+.
T Consensus        65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~----~~~~~~E~~~~~~--~~~p~  138 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDK----TTYPIDETMIHNG--PPHNS  138 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSS----CCSSBCGGGGGBS--CCCSS
T ss_pred             EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCC----CCCCccccccccC--CCCCC
Confidence            99999975421 11223377899999999999999999999999999997655433    3678888873211  11223


Q ss_pred             c-hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHH----HHhcCccc---cCCccccccc
Q 020924          159 N-WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIK----LLKEGYES---LENKLRMIVD  227 (319)
Q Consensus       159 ~-~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~----~~~~~~~~---~~~~~~~~i~  227 (319)
                      + +|+.+|.++|.+++.++++++++++++||+++||++....   ...+..++.+    ...+.++.   .|++.++|+|
T Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (319)
T 4b8w_A          139 NFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIY  218 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEe
Confidence            4 6999999999999999988899999999999999986532   2344555555    66776655   3458899999


Q ss_pred             HHHHHHHHHHhhccCCC--CceEEEe-cccCCHHHHHHHHHHhCCCCC-C--CCCCCCCCCceeechHHHHH-hCCccc-
Q 020924          228 VRDVAEALLLAYEKAEA--EGRYICT-AHMIRARDLVDKLKSLYPNYN-Y--PKSFTEKEDEVMLTSEKLQK-LGWSYR-  299 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~--~~~~~~~-~~~~s~~e~~~~~~~~~g~~~-~--~~~~~~~~~~~~~d~~k~~~-lg~~~~-  299 (319)
                      ++|+|++++.+++++..  +++||++ +..+|+.|+++.+.+.+|... +  ............+|++|+++ |||.|. 
T Consensus       219 v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~  298 (319)
T 4b8w_A          219 SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFT  298 (319)
T ss_dssp             HHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCC
T ss_pred             HHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCC
Confidence            99999999999987543  3378765 699999999999999998421 1  11122233557899999999 999998 


Q ss_pred             cHHHHHHHHHHHHHHcC
Q 020924          300 SLEETLVDSVESYKKVG  316 (319)
Q Consensus       300 ~~~~~l~~~~~~~~~~~  316 (319)
                      +++++|+++++||+++.
T Consensus       299 ~~~~~l~~~~~~~~~~~  315 (319)
T 4b8w_A          299 PFKQAVKETCAWFTDNY  315 (319)
T ss_dssp             CHHHHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            99999999999999864

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.6e-44  Score=320.23  Aligned_cols=302  Identities=18%  Similarity=0.228  Sum_probs=232.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      |+|||||||||||++++++|+++ |++|++++|+........+..+.. ..+++++.+|++|.+++.++++  ++|+|||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE-SNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            47999999999999999999997 799999999753211112222211 3578999999999999999998  8999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC--CCC-------EEEEeccccccccCCC------CCCCcccCCCC
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA--KVK-------RVIVVSSGVAVGLNPR------WPKGQIMDETC  147 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~-------~iv~~SS~~~~~~~~~------~~~~~~~~E~~  147 (319)
                      +||........+.+...+++|+.++.+++++|++.  +++       +|||+||.++++....      .....+++|++
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            99975421111223778999999999999999988  877       9999999766543210      00011677877


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  224 (319)
                      +..+      .++|+.+|.++|.+++.++.+++++++++||+.+||+..... ..+..++..+..+.+..   .+++.++
T Consensus       160 ~~~~------~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (361)
T 1kew_A          160 AYAP------SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRD  232 (361)
T ss_dssp             CCCC------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred             CCCC------CCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEe
Confidence            6544      688999999999999999888899999999999999986432 34455667777776544   3457899


Q ss_pred             cccHHHHHHHHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCC-CC--C--------CCCCCCCCceeechHHHH
Q 020924          225 IVDVRDVAEALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNY-NY--P--------KSFTEKEDEVMLTSEKLQ  292 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~-~~--~--------~~~~~~~~~~~~d~~k~~  292 (319)
                      |+|++|+|++++.+++....+++|++++ ..+|+.|+++.+.+.+|.. +.  |        ...+.......+|++|++
T Consensus       233 ~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (361)
T 1kew_A          233 WLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKIS  312 (361)
T ss_dssp             EEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHH
T ss_pred             eEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHH
Confidence            9999999999999998765556898875 7899999999999988621 10  0        001111234678999999


Q ss_pred             H-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          293 K-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       293 ~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      + |||+|. +++++|+++++|++++
T Consensus       313 ~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          313 RELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             HHhCCCCccCHHHHHHHHHHHHHhc
Confidence            8 999998 9999999999999875

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=4.3e-44  Score=315.56  Aligned_cols=301  Identities=18%  Similarity=0.261  Sum_probs=231.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh-hhHHHHhcCcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY-DSVKSAIVGCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vi~~   83 (319)
                      |+|||||||||||++++++|+++ |++|++++|+.....  .   +. ...+++++.+|++|. +.+.++++++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~---~~-~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~   74 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS--R---FL-NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG--G---GT-TCTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHH--H---hh-cCCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence            47999999999999999999998 899999999865321  1   11 135789999999984 5688888999999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccc-cCCchHH
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR-TTNNWYC  162 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~Y~  162 (319)
                      ||..........+...+++|+.++.+++++|++.+ ++|||+||.++++..    ...+++|+++..+..+. .+.+.|+
T Consensus        75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~----~~~~~~e~~~~~~~~~~~~~~~~Y~  149 (345)
T 2bll_A           75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMC----SDKYFDEDHSNLIVGPVNKPRWIYS  149 (345)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTC----CCSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCC----CCCCcCCcccccccCcccCcccccH
Confidence            98654311111236788999999999999999988 899999997765433    24567888764321111 2356899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-------CCccHHHHHHHHhcCccc---cCCcccccccHHHHH
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-------VNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVA  232 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a  232 (319)
                      .+|.++|.+++.++++++++++++||+.+||+.....       ...+..++.....+.+..   .+++.++|+|++|+|
T Consensus       150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  229 (345)
T 2bll_A          150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI  229 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHH
Confidence            9999999999999887899999999999999986431       123456677777777654   345889999999999


Q ss_pred             HHHHHhhccCC---CCceEEEec-c-cCCHHHHHHHHHHhCCCCC----CCCCCC--------------CCCCceeechH
Q 020924          233 EALLLAYEKAE---AEGRYICTA-H-MIRARDLVDKLKSLYPNYN----YPKSFT--------------EKEDEVMLTSE  289 (319)
Q Consensus       233 ~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~~~~~~g~~~----~~~~~~--------------~~~~~~~~d~~  289 (319)
                      ++++.+++++.   .+++|++++ . .+|+.|+++.+.+.+|...    ++....              .......+|++
T Consensus       230 ~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  309 (345)
T 2bll_A          230 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR  309 (345)
T ss_dssp             HHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCH
T ss_pred             HHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHH
Confidence            99999998763   345898876 4 7999999999999886321    121110              11234678999


Q ss_pred             HHHH-hCCccc-cHHHHHHHHHHHHHHcCC
Q 020924          290 KLQK-LGWSYR-SLEETLVDSVESYKKVGI  317 (319)
Q Consensus       290 k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~  317 (319)
                      |+++ |||+|. +++++|+++++|++++.-
T Consensus       310 k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~  339 (345)
T 2bll_A          310 NAHRCLDWEPKIDMQETIDETLDFFLRTVD  339 (345)
T ss_dssp             HHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             HHHHhcCCCccccHHHHHHHHHHHHHHcCC
Confidence            9998 999998 999999999999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=9.3e-44  Score=313.35  Aligned_cols=301  Identities=19%  Similarity=0.193  Sum_probs=231.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   80 (319)
                      |++|+|||||||||||++++++|+++|++|++++|+........+..+. ...+++++.+|++|.+++.+++++  +|+|
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            4568999999999999999999999999999999987643222333221 124789999999999999999885  6999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV-KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      ||+||........+.+...+++|+.++.+++++|++.++ ++|||+||.++|+..    ...+++|+++..|      .+
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~----~~~~~~e~~~~~~------~~  149 (345)
T 2z1m_A           80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKV----QEIPQTEKTPFYP------RS  149 (345)
T ss_dssp             EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSC----SSSSBCTTSCCCC------CS
T ss_pred             EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC----CCCCCCccCCCCC------CC
Confidence            999997543211233478899999999999999998887 899999997765543    2457888876554      67


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCcc--c--cCCcccccccHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYE--S--LENKLRMIVDVRDVAE  233 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~--~~~~~~~~i~v~D~a~  233 (319)
                      +|+.+|.++|.+++.++.+++++++++|++++|||+.....  ..+..++.+...+...  .  .+++.++|+|++|+|+
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~  229 (345)
T 2z1m_A          150 PYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVE  229 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHH
Confidence            89999999999999998888999999999999999754321  1122334444555432  2  3347789999999999


Q ss_pred             HHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC-C-----CCC------------------CCCCCCCceeech
Q 020924          234 ALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY-N-----YPK------------------SFTEKEDEVMLTS  288 (319)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~-~-----~~~------------------~~~~~~~~~~~d~  288 (319)
                      +++.+++++. .++|+++ +..+|+.|+++.+.+.+|.. +     +|.                  ..+.......+|+
T Consensus       230 a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (345)
T 2z1m_A          230 AMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNP  308 (345)
T ss_dssp             HHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred             HHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCH
Confidence            9999998765 4788775 58899999999999999842 1     110                  0111123467899


Q ss_pred             HHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          289 EKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       289 ~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      +|+++ |||+|. +++++++++++|++++
T Consensus       309 ~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          309 EKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence            99998 999998 9999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=5.2e-44  Score=315.47  Aligned_cols=299  Identities=18%  Similarity=0.170  Sum_probs=227.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh--------hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD--------EKNARLYELEKASENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      +|+|||||||||||++++++|+++|++|++++|+...        .....+...  .+.+++++.+|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--cCCceEEEECCCCCHHHHHHHHHh
Confidence            4689999999999999999999999999999986542        111122211  13578999999999999999998 


Q ss_pred             -CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           76 -GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                       ++|+|||+|+........+.+...+++|+.++.+++++|++.++++|||+||.++++..    ...+++|+++..|   
T Consensus        80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~----~~~~~~E~~~~~p---  152 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNP----QYLPLDEAHPTGG---  152 (348)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSC----SSSSBCTTSCCCC---
T ss_pred             cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCC----CCCCcCCCCCCCC---
Confidence             79999999986542111122367899999999999999999999999999997665432    3567888876543   


Q ss_pred             ccCCchHHhhHHHHHHHHHHhhhh-CCceEEEEecCcccCCCCCC---------CCCccHHHHHHHH-hcCccc------
Q 020924          155 RTTNNWYCLSKTEAESEALEFGKK-TGLDVVTICPNLVLGPLLQS---------KVNTSSLVLIKLL-KEGYES------  217 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~v~G~~~~~---------~~~~~~~~~~~~~-~~~~~~------  217 (319)
                        ..++|+.+|.++|.+++.++++ .+++++++||+++||+....         ...++..++.... .+..+.      
T Consensus       153 --~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (348)
T 1ek6_A          153 --CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY  230 (348)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             --CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcc
Confidence              1577999999999999999876 23999999999999985311         1123333333333 233322      


Q ss_pred             ---cCCcccccccHHHHHHHHHHhhccC--CCC-ceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC----CCCCCCceee
Q 020924          218 ---LENKLRMIVDVRDVAEALLLAYEKA--EAE-GRYICT-AHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDEVML  286 (319)
Q Consensus       218 ---~~~~~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~----~~~~~~~~~~  286 (319)
                         .|++.++|+|++|+|++++.+++++  ..+ ++||++ +..+|+.|+++.+.+.+|. +.+..    .........+
T Consensus       231 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~  309 (348)
T 1ek6_A          231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVARREGDVAACYA  309 (348)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCSEECB
T ss_pred             cCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCccchhhcc
Confidence               2457899999999999999999865  233 589876 5889999999999999984 22211    1222345789


Q ss_pred             chHHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          287 TSEKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       287 d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |++|+++ |||+|+ +++++|+++++|++++
T Consensus       310 d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  340 (348)
T 1ek6_A          310 NPSLAQEELGWTAALGLDRMCEDLWRWQKQN  340 (348)
T ss_dssp             CCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence            9999988 999998 9999999999999876

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.4e-44  Score=315.52  Aligned_cols=288  Identities=16%  Similarity=0.142  Sum_probs=226.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +++|+|||||||||||++++++|+++|++|++++|+....  ....+.... ...+++++.+|++          ++|+|
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~----------~~d~v   73 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS----------DVRLV   73 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT----------TEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc----------cCCEE
Confidence            4578999999999999999999999999999999976520  000111100 1134455555554          88999


Q ss_pred             EEecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           81 FHIACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        81 i~~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      ||+|+...... ..++ ...++ |+.++.+++++|++.++++|||+||.++|+..    ...+++|+++..|      .+
T Consensus        74 i~~a~~~~~~~~~~~~-~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~----~~~~~~E~~~~~p------~~  141 (321)
T 3vps_A           74 YHLASHKSVPRSFKQP-LDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQA----DTLPTPEDSPLSP------RS  141 (321)
T ss_dssp             EECCCCCCHHHHTTST-TTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC----SSSSBCTTSCCCC------CS
T ss_pred             EECCccCChHHHHhCH-HHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCC----CCCCCCCCCCCCC------CC
Confidence            99999765321 1233 56677 99999999999999999999999997765543    3568889887665      78


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCc-eEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGL-DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEAL  235 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~-~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~  235 (319)
                      .|+.+|.++|.+++.+++++++ +++++||+++||+..... ..+..++.....+.+..   .+++.++|+|++|+|+++
T Consensus       142 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~  220 (321)
T 3vps_A          142 PYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKL  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHH
Confidence            8999999999999999988899 999999999999986542 45667777777777655   345889999999999999


Q ss_pred             HHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceeechHHHHH-hCCcc-c-cHHHHHHH
Q 020924          236 LLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVMLTSEKLQK-LGWSY-R-SLEETLVD  307 (319)
Q Consensus       236 ~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d~~k~~~-lg~~~-~-~~~~~l~~  307 (319)
                      +.+++++..+ +|+++ +..+|+.|+++.+. .+|.. .+.    ..........+|++|+++ |||+| . +++++|++
T Consensus       221 ~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~  297 (321)
T 3vps_A          221 VALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPA-AEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRL  297 (321)
T ss_dssp             HHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTT-CEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHH
T ss_pred             HHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCC-CccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHH
Confidence            9999987765 99887 58899999999999 88842 111    122334568999999999 99999 5 99999999


Q ss_pred             HHHHHHHcCC
Q 020924          308 SVESYKKVGI  317 (319)
Q Consensus       308 ~~~~~~~~~~  317 (319)
                      +++||++++.
T Consensus       298 ~~~~~~~~~~  307 (321)
T 3vps_A          298 TLEWWQSRDL  307 (321)
T ss_dssp             HHHHHHTSCT
T ss_pred             HHHHHHhCCC
Confidence            9999998764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-43  Score=314.62  Aligned_cols=300  Identities=15%  Similarity=0.153  Sum_probs=227.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc----cCCCeEEEEccCCChhhHHHHhcC--cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK----ASENLKLFKADLLDYDSVKSAIVG--CN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~--~d   78 (319)
                      ||+|||||||||||++++++|+++|++|++++|+........+..+..    ...+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            478999999999999999999999999999999765321112222211    124788999999999999999885  79


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV---KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~---~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      +|||+||........+.+...+++|+.++.+++++|++.++   ++||++||.++|+..    ...+++|+++..|    
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~----~~~~~~E~~~~~~----  152 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLV----QEIPQKETTPFYP----  152 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTC----CSSSBCTTSCCCC----
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCC----CCCCCCccCCCCC----
Confidence            99999997654332333467889999999999999999987   799999997765433    2457888876654    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCcc--c--cCCcccccccHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYE--S--LENKLRMIVDVR  229 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~--~~~~~~~~i~v~  229 (319)
                        .++|+.+|.++|.+++.++++++++++++|++++|||+.....  ..+..++.....+...  .  .+++.++|+|++
T Consensus       153 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          153 --RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             --CChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence              6789999999999999998888999999999999999754321  1233445555566532  2  345889999999


Q ss_pred             HHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC-C-----CCC---------------------------
Q 020924          230 DVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY-N-----YPK---------------------------  275 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~-~-----~~~---------------------------  275 (319)
                      |+|++++.+++++. .++||++ +..+|+.|+++.+.+.+|.. +     +|.                           
T Consensus       231 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (372)
T 1db3_A          231 DYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPR  309 (372)
T ss_dssp             HHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGG
T ss_pred             HHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeecccc
Confidence            99999999998765 4789776 57899999999999999731 1     110                           


Q ss_pred             -CCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          276 -SFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       276 -~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                       ..+.......+|++|+++ |||+|. +++++|+++++||+++
T Consensus       310 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  352 (372)
T 1db3_A          310 YFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA  352 (372)
T ss_dssp             GCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence             011112346789999988 999997 9999999999999864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1e-43  Score=319.82  Aligned_cols=307  Identities=16%  Similarity=0.153  Sum_probs=230.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh---------------HHHHHhhh-ccCCCeEEEEccCCCh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK---------------NARLYELE-KASENLKLFKADLLDY   67 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~~~~~-~~~~~~~~~~~Dl~~~   67 (319)
                      .|++|||||||||||++++++|+++|++|++++|......               ...+.... ....+++++.+|++|.
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            5789999999999999999999999999999998643211               00111110 1135789999999999


Q ss_pred             hhHHHHhcC--cceEEEecccCCCCC-CCCcc--chhhhhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCc
Q 020924           68 DSVKSAIVG--CNGVFHIACPAPSTT-VPNPQ--MELLEPAVKGTLNVVKACLEAKV-KRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        68 ~~~~~~~~~--~d~vi~~a~~~~~~~-~~~~~--~~~~~~Nv~~~~~l~~~~~~~~~-~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                      +++.+++++  +|+|||+||...... ..++.  ...+++|+.++.+++++|++.++ ++|||+||.++|+ ..    ..
T Consensus        90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg-~~----~~  164 (404)
T 1i24_A           90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYG-TP----NI  164 (404)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGC-CC----SS
T ss_pred             HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhC-CC----CC
Confidence            999999987  999999999754321 12221  24789999999999999999887 5999999976554 32    24


Q ss_pred             ccCCCCCCCc--------cccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC--------------
Q 020924          142 IMDETCWSDK--------EYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK--------------  199 (319)
Q Consensus       142 ~~~E~~~~~~--------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~--------------  199 (319)
                      +++|+.+...        ..+..+.++|+.||.++|.+++.++++++++++++||+++|||+....              
T Consensus       165 ~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~  244 (404)
T 1i24_A          165 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA  244 (404)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred             CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence            5666522100        012234788999999999999999887899999999999999976321              


Q ss_pred             --CCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhhccCCC-C--ceEEEecccCCHHHHHHHHHHh---C
Q 020924          200 --VNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAYEKAEA-E--GRYICTAHMIRARDLVDKLKSL---Y  268 (319)
Q Consensus       200 --~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~-~--~~~~~~~~~~s~~e~~~~~~~~---~  268 (319)
                        ...+..++.++..+.+..   .|++.++|+|++|+|++++.+++++.. +  .+||+++..+|+.|+++.+.+.   +
T Consensus       245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~~  324 (404)
T 1i24_A          245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKL  324 (404)
T ss_dssp             TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTT
T ss_pred             chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHhh
Confidence              234567778888887654   345789999999999999999987654 3  3898887889999999999998   5


Q ss_pred             CCC-C---CCCCCCC-CCCceeechHHHHHhCCccc-cHHHHHHHHHHHHHHc
Q 020924          269 PNY-N---YPKSFTE-KEDEVMLTSEKLQKLGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       269 g~~-~---~~~~~~~-~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      |.. +   .|..... ......+|++|+++|||+|+ +++++++++++|++..
T Consensus       325 g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~  377 (404)
T 1i24_A          325 GLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF  377 (404)
T ss_dssp             TCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             CCCccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhh
Confidence            531 1   1111111 12346789999988999999 9999999999999754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-43  Score=316.26  Aligned_cols=299  Identities=19%  Similarity=0.158  Sum_probs=230.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-----cCCCeEEEEccCCChhhHHHHhcC--cc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-----ASENLKLFKADLLDYDSVKSAIVG--CN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~--~d   78 (319)
                      |+|||||||||||++++++|+++|++|++++|+........+..+..     ...+++++.+|++|.+++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999865311111111100     124688999999999999999885  69


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV---KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~---~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      +|||+||........+.+...+++|+.++.+++++|++.++   ++|||+||.++++..    ...+++|+++..|    
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~----~~~~~~E~~~~~~----  176 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKV----QEIPQKETTPFYP----  176 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSC----SSSSBCTTSCCCC----
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCC----CCCCCCccCCCCC----
Confidence            99999997543211122367899999999999999999987   899999997766543    2467888876554    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCcc--c--cCCcccccccHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYE--S--LENKLRMIVDVR  229 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~--~~~~~~~~i~v~  229 (319)
                        .++|+.+|.++|.+++.++.+++++++++||+++|||......  ..+..++.++..+...  .  .+++.++|+|++
T Consensus       177 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  254 (375)
T 1t2a_A          177 --RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK  254 (375)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred             --CChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence              6789999999999999998888999999999999999754321  1223455555666532  2  345889999999


Q ss_pred             HHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC-C-----CCCC------------------CCCCCCce
Q 020924          230 DVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY-N-----YPKS------------------FTEKEDEV  284 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~-~-----~~~~------------------~~~~~~~~  284 (319)
                      |+|++++.+++++. .++|+++ +..+|+.|+++.+.+.+|.. +     +|..                  .+......
T Consensus       255 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (375)
T 1t2a_A          255 DYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFL  333 (375)
T ss_dssp             HHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBC
T ss_pred             HHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhh
Confidence            99999999998765 4788775 58899999999999999842 1     1100                  11122346


Q ss_pred             eechHHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          285 MLTSEKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       285 ~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      .+|++|+++ |||+|+ +++++|+++++|+++.
T Consensus       334 ~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  366 (375)
T 1t2a_A          334 QGDCTKAKQKLNWKPRVAFDELVREMVHADVEL  366 (375)
T ss_dssp             CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence            789999998 999998 9999999999999875

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.6e-44  Score=312.99  Aligned_cols=287  Identities=17%  Similarity=0.193  Sum_probs=225.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   80 (319)
                      |++|+|||||||||||++++++|+++|++|+++.|+..                     +|++|.+++.++++  ++|+|
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~---------------------~D~~d~~~~~~~~~~~~~d~v   59 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------LNLLDSRAVHDFFASERIDQV   59 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------CCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc---------------------CCccCHHHHHHHHHhcCCCEE
Confidence            45679999999999999999999999999999877531                     69999999999998  89999


Q ss_pred             EEecccCCCC-CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccC-C
Q 020924           81 FHIACPAPST-TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT-N  158 (319)
Q Consensus        81 i~~a~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~  158 (319)
                      ||+|+..... .....+...+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++...  +..| .
T Consensus        60 ih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~----~~~~~~E~~~~~~--~~~p~~  133 (321)
T 1e6u_A           60 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKL----AKQPMAESELLQG--TLEPTN  133 (321)
T ss_dssp             EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTT----CCSSBCGGGTTSS--CCCGGG
T ss_pred             EEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCC----CCCCcCccccccC--CCCCCC
Confidence            9999875421 01112367899999999999999999999999999997765533    3567888774321  1122 3


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhc-----Cccc---cCCccccccc
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKE-----GYES---LENKLRMIVD  227 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~-----~~~~---~~~~~~~~i~  227 (319)
                      ++|+.+|.++|.+++.++++++++++++||+.+||+.....   ...+..++..+..+     .+..   .+++.++|+|
T Consensus       134 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~  213 (321)
T 1e6u_A          134 EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLH  213 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEE
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEE
Confidence            58999999999999999887899999999999999976532   13455566665542     3332   3558899999


Q ss_pred             HHHHHHHHHHhhccCCC---------CceEEEe-cccCCHHHHHHHHHHhCCCCC-CC--CCCCCCCCceeechHHHHHh
Q 020924          228 VRDVAEALLLAYEKAEA---------EGRYICT-AHMIRARDLVDKLKSLYPNYN-YP--KSFTEKEDEVMLTSEKLQKL  294 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~---------~~~~~~~-~~~~s~~e~~~~~~~~~g~~~-~~--~~~~~~~~~~~~d~~k~~~l  294 (319)
                      ++|+|++++.+++++..         +++||++ +..+|+.|+++.+.+.+|... +.  ...+.......+|++|+++|
T Consensus       214 v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~l  293 (321)
T 1e6u_A          214 VDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQL  293 (321)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHT
T ss_pred             HHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHHhc
Confidence            99999999999987654         3689886 588999999999999998321 11  11122345678999999889


Q ss_pred             CCccc-cHHHHHHHHHHHHHHcC
Q 020924          295 GWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       295 g~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                      ||+|. +++++|+++++||+++.
T Consensus       294 G~~p~~~~~~~l~~~~~~~~~~~  316 (321)
T 1e6u_A          294 GWYHEISLEAGLASTYQWFLENQ  316 (321)
T ss_dssp             TCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             CCccCCcHHHHHHHHHHHHHHHH
Confidence            99998 99999999999998764

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=2.1e-43  Score=316.98  Aligned_cols=304  Identities=18%  Similarity=0.193  Sum_probs=228.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH-HCCCeEEEEEcCCChhh-------HHHH----Hhhhcc--CCC---eEEEEccCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLL-SRDYFVHGTAREPSDEK-------NARL----YELEKA--SEN---LKLFKADLLDY   67 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~-------~~~~----~~~~~~--~~~---~~~~~~Dl~~~   67 (319)
                      +|+|||||||||||++++++|+ ++|++|++++|+.....       ...+    ..+...  ..+   ++++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3689999999999999999999 99999999999765310       1112    122111  124   89999999999


Q ss_pred             hhHHHHhc--C-cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC---CCCCc
Q 020924           68 DSVKSAIV--G-CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPR---WPKGQ  141 (319)
Q Consensus        68 ~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~---~~~~~  141 (319)
                      +.+.++++  + +|+|||+|+........+.+...+++|+.++.+++++|++.++++|||+||.++++....   .+...
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            99999987  6 999999999754321112236789999999999999999999999999999665543210   00146


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCC--------CCCccHHHH----HH
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQS--------KVNTSSLVL----IK  209 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~--------~~~~~~~~~----~~  209 (319)
                      +++|+++..|      .++|+.+|.++|.+++.++.+++++++++||+++||+....        ...++..++    .+
T Consensus       162 ~~~E~~~~~p------~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~  235 (397)
T 1gy8_A          162 PIDINAKKSP------ESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD  235 (397)
T ss_dssp             CBCTTSCCBC------SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHH
T ss_pred             CcCccCCCCC------CCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHH
Confidence            7888876544      68899999999999999988889999999999999996421        112333333    14


Q ss_pred             HHhcCc------------cc---------cCCcccccccHHHHHHHHHHhhccCC-C-----C---ceEEEe-cccCCHH
Q 020924          210 LLKEGY------------ES---------LENKLRMIVDVRDVAEALLLAYEKAE-A-----E---GRYICT-AHMIRAR  258 (319)
Q Consensus       210 ~~~~~~------------~~---------~~~~~~~~i~v~D~a~~~~~~~~~~~-~-----~---~~~~~~-~~~~s~~  258 (319)
                      +..+..            +.         .|++.++|||++|+|++++.+++.+. .     .   ++||++ +..+|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  315 (397)
T 1gy8_A          236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (397)
T ss_dssp             HSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             HHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHH
Confidence            434432            21         23578999999999999999997643 2     2   689886 5889999


Q ss_pred             HHHHHHHHhCCCCCCCCC----CCCCCCceeechHHHHH-hCCccc--cHHHHHHHHHHHHHHc
Q 020924          259 DLVDKLKSLYPNYNYPKS----FTEKEDEVMLTSEKLQK-LGWSYR--SLEETLVDSVESYKKV  315 (319)
Q Consensus       259 e~~~~~~~~~g~~~~~~~----~~~~~~~~~~d~~k~~~-lg~~~~--~~~~~l~~~~~~~~~~  315 (319)
                      |+++.+.+.+|. +.+..    .........+|++|+++ |||+|+  +++++|+++++|++++
T Consensus       316 e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          316 EVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             HHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCC-CCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            999999999884 22221    12233468899999988 999998  9999999999999876

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=5.2e-43  Score=308.47  Aligned_cols=299  Identities=18%  Similarity=0.232  Sum_probs=228.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +++|+|||||||||||++++++|+++|++|++++|+...... .+..+. ...+++++.+|+++..     +.++|+|||
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~-----~~~~d~vih   97 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR-NVEHWI-GHENFELINHDVVEPL-----YIEVDQIYH   97 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-GTGGGT-TCTTEEEEECCTTSCC-----CCCCSEEEE
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh-hhhhhc-cCCceEEEeCccCChh-----hcCCCEEEE
Confidence            567899999999999999999999999999999997543211 111111 1357899999998763     568999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +|+..........+...+++|+.++.+++++|++.++ +|||+||.++|+..    ...+++|+.+.... +..+.+.|+
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~----~~~~~~E~~~~~~~-~~~~~~~Y~  171 (343)
T 2b69_A           98 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDP----EVHPQSEDYWGHVN-PIGPRACYD  171 (343)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSC----SSSSBCTTCCCBCC-SSSTTHHHH
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCC----CCCCCcccccccCC-CCCCCCchH
Confidence            9997543211122367899999999999999999887 99999997665433    24677887543221 223468899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-CCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHh
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLA  238 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~  238 (319)
                      .+|.++|.+++.++++++++++++||+++||+..... ...+..++.+...+.+..   .+++.++|+|++|+|++++.+
T Consensus       172 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  251 (343)
T 2b69_A          172 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL  251 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHH
Confidence            9999999999999887899999999999999976432 234556777777777654   345789999999999999999


Q ss_pred             hccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCC-CC--CCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHH
Q 020924          239 YEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYN-YP--KSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESY  312 (319)
Q Consensus       239 ~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-~~--~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~  312 (319)
                      ++.+. +++|++++ ..+|+.|+++.+.+.+|... +.  ...........+|++|+++ |||+|. +++++|+++++|+
T Consensus       252 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~  330 (343)
T 2b69_A          252 MNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF  330 (343)
T ss_dssp             HTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             HhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence            98653 56887765 88999999999999998421 11  0111223457889999998 999997 9999999999999


Q ss_pred             HHc
Q 020924          313 KKV  315 (319)
Q Consensus       313 ~~~  315 (319)
                      +++
T Consensus       331 ~~~  333 (343)
T 2b69_A          331 RKE  333 (343)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.1e-42  Score=305.21  Aligned_cols=291  Identities=21%  Similarity=0.241  Sum_probs=223.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   80 (319)
                      ++||+|||||||||||++++++|+++|++|++++|+..... ..+..    ..+++++.+|++|.+++.+++++  +|+|
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~v   93 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR-EHLKD----HPNLTFVEGSIADHALVNQLIGDLQPDAV   93 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGSCC----CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch-hhHhh----cCCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence            56789999999999999999999999999999999754321 11111    14789999999999999999987  9999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC-c
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN-N  159 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~  159 (319)
                      ||+||..... ....+.  +++|+.++.+++++|++.++++|||+||.++++..+..... +++|++  .|      . +
T Consensus        94 ih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p------~~~  161 (333)
T 2q1w_A           94 VHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NP------ANS  161 (333)
T ss_dssp             EECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CC------TTC
T ss_pred             EECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CC------CCC
Confidence            9999976542 112212  89999999999999999999999999997765411100122 677776  22      4 7


Q ss_pred             hHHhhHHHHHHHHHH-hhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc-CCcccccccHHHHHHHHHH
Q 020924          160 WYCLSKTEAESEALE-FGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL-ENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~-~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~  237 (319)
                      +|+.+|.++|.+++. ++     +++++||+++||++..  ...+..++.....+. ... +++.++|+|++|+|++++.
T Consensus       162 ~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~ai~~  233 (333)
T 2q1w_A          162 SYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLARATVR  233 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHHHHHHH
Confidence            799999999999988 65     7899999999999832  234555666666665 222 4578999999999999999


Q ss_pred             hhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCCCCCCC--CC----CCCceeechHHHHHhCCccc-cHHHHHHHHH
Q 020924          238 AYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYNYPKSF--TE----KEDEVMLTSEKLQKLGWSYR-SLEETLVDSV  309 (319)
Q Consensus       238 ~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~~--~~----~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~  309 (319)
                      +++.+. +++|++++ ..+|+.|+++.+.+.+|...+....  .+    ......+|++|++++||+|. +++++|++++
T Consensus       234 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~  312 (333)
T 2q1w_A          234 AVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAV  312 (333)
T ss_dssp             HHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred             HHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHHH
Confidence            998776 66898764 8899999999999999853111100  00    11457899999998899997 9999999999


Q ss_pred             HHHHHcCCCC
Q 020924          310 ESYKKVGILN  319 (319)
Q Consensus       310 ~~~~~~~~~~  319 (319)
                      +||++++.++
T Consensus       313 ~~~~~~~~~~  322 (333)
T 2q1w_A          313 AYFREYGVSG  322 (333)
T ss_dssp             HHHHHHCC--
T ss_pred             HHHHHHCCCC
Confidence            9999998764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=7.8e-43  Score=306.73  Aligned_cols=299  Identities=18%  Similarity=0.136  Sum_probs=222.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      |+|||||||||||++++++|+++|++|++++|.....  ....+....  +.+++++.+|++|.+++.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            4799999999999999999999999999998753321  111222211  2467889999999999999887  489999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      |+||........+.+...+++|+.++.+++++|++.++++|||+||.++++..    ...+++|+++..|     +.++|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~----~~~~~~e~~~~~~-----~~~~Y  149 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDN----PKIPYVESFPTGT-----PQSPY  149 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC----CSSSBCTTSCCCC-----CSSHH
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCC----CCCCcCcccCCCC-----CCChH
Confidence            99986532111112367889999999999999999899999999997655432    2467788775432     25779


Q ss_pred             HhhHHHHHHHHHHhhhhC-CceEEEEecCcccCCCCC------CC--CCccHHHHHHHHhc--Cccc---------cCCc
Q 020924          162 CLSKTEAESEALEFGKKT-GLDVVTICPNLVLGPLLQ------SK--VNTSSLVLIKLLKE--GYES---------LENK  221 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~------~~--~~~~~~~~~~~~~~--~~~~---------~~~~  221 (319)
                      +.||.++|.+++.++.++ +++++++||+++||+...      ..  ...+...+.+...+  ....         .|++
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  229 (338)
T 1udb_A          150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTG  229 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCce
Confidence            999999999999998776 899999999999998431      11  11222333333332  2211         2457


Q ss_pred             ccccccHHHHHHHHHHhhccC--CCC-ceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC----CCCCCCceeechHHHHH
Q 020924          222 LRMIVDVRDVAEALLLAYEKA--EAE-GRYICT-AHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDEVMLTSEKLQK  293 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~----~~~~~~~~~~d~~k~~~  293 (319)
                      .++|||++|+|++++.+++..  ..+ ++||++ +..+|+.|+++.+.+.+|. +.+..    .........+|++|+++
T Consensus       230 ~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~  308 (338)
T 1udb_A          230 VRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASKADR  308 (338)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBCCBCCHHHHH
T ss_pred             eeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCC-CCcceeCCCCCCchhhhhcCHHHHHH
Confidence            789999999999999998763  232 479886 5889999999999999873 22211    12223457799999988


Q ss_pred             -hCCccc-cHHHHHHHHHHHHHHcC
Q 020924          294 -LGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       294 -lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                       |||+|+ +++++|+++++|++++.
T Consensus       309 ~lG~~p~~~l~~~l~~~~~w~~~~~  333 (338)
T 1udb_A          309 ELNWRVTRTLDEMAQDTWHWQSRHP  333 (338)
T ss_dssp             HHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HcCCCcCCCHHHHHHHHHHHHHhcc
Confidence             999998 99999999999998763

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=4.8e-43  Score=308.41  Aligned_cols=306  Identities=28%  Similarity=0.369  Sum_probs=233.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh-hc-cCCCeEEE-EccCCChhhHHHHhcCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL-EK-ASENLKLF-KADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~-~~~~~~~~-~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +++|+|||||||||||++++++|+++|++|++++|+....  ..+... .. .+.+++++ .+|++|.+.+.++++++|+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL--ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccH--HHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            5678999999999999999999999999999999975432  111111 10 12478888 7999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHh-CCCCEEEEeccccccccCCCCCCCcccCCCCCCCcc------
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE------  152 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~------  152 (319)
                      |||+|+.....  .+ +...+++|+.++.+++++|++ .++++|||+||.++++.........+++|+++....      
T Consensus        87 vih~A~~~~~~--~~-~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSFS--NK-YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSCC--SC-HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCCC--CC-HHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            99999976542  23 377899999999999999985 578999999998776533110112678888743210      


Q ss_pred             ----ccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc-cCC-cc
Q 020924          153 ----YCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES-LEN-KL  222 (319)
Q Consensus       153 ----~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~-~~~-~~  222 (319)
                          .+..+.++|+.||.++|.+++.+++++  +++++++||+++||+......  ..+..++.++..+.+.. .++ +.
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPP  243 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCS
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCc
Confidence                012336789999999999999998765  789999999999999765432  25566777777777654 333 67


Q ss_pred             cccccHHHHHHHHHHhhccCCCCc-eEEEecccCCHHHHHHHHHHhCCCCCCCCCCCC-CCCceeechHHHHH-hCC---
Q 020924          223 RMIVDVRDVAEALLLAYEKAEAEG-RYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE-KEDEVMLTSEKLQK-LGW---  296 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~k~~~-lg~---  296 (319)
                      ++|+|++|+|++++.+++++...+ .+++++..+|+.|+++.+.+.+|...++..... ......+|++|+++ |||   
T Consensus       244 ~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~  323 (342)
T 1y1p_A          244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGR  323 (342)
T ss_dssp             EEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTC
T ss_pred             CCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCccccccccCChHHHHHHHhhccc
Confidence            899999999999999998765444 566777889999999999999985333322221 22347789999998 887   


Q ss_pred             -ccccHHHHHHHHHHHHH
Q 020924          297 -SYRSLEETLVDSVESYK  313 (319)
Q Consensus       297 -~~~~~~~~l~~~~~~~~  313 (319)
                       .+++++++|+++++|++
T Consensus       324 ~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          324 PGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             CSCCCHHHHHHHHHCCSC
T ss_pred             CCcCCHHHHHHHHHHHhh
Confidence             34599999999999874

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=3.2e-43  Score=311.53  Aligned_cols=291  Identities=16%  Similarity=0.149  Sum_probs=226.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----C
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----G   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~   76 (319)
                      +++|+|||||||||||++++++|+++| ++|++++|+......   ..+    .++. +.+|++|.+.+..+++     +
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~----~~~~-~~~d~~~~~~~~~~~~~~~~~~  115 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---VNL----VDLN-IADYMDKEDFLIQIMAGEEFGD  115 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG---GGT----TTSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh---hcc----cCce-EeeecCcHHHHHHHHhhcccCC
Confidence            456899999999999999999999999 999999997654211   111    1233 6789999999999887     5


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccccc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  156 (319)
                      +|+|||+|+.... . ...+...+++|+.++.+++++|++.++ +|||+||.++++..    ...+++|+++..|     
T Consensus       116 ~d~Vih~A~~~~~-~-~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~----~~~~~~E~~~~~p-----  183 (357)
T 2x6t_A          116 VEAIFHEGACSST-T-EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR----TSDFIESREYEKP-----  183 (357)
T ss_dssp             CCEEEECCSCCCT-T-CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSC----SSCCCSSGGGCCC-----
T ss_pred             CCEEEECCcccCC-c-cCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCC----CCCCcCCcCCCCC-----
Confidence            9999999997654 2 233478899999999999999999998 99999997765433    2457788775544     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccc-c--CCc-ccccccHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYES-L--ENK-LRMIVDVR  229 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~-~~~~i~v~  229 (319)
                       .++|+.+|.++|.+++.++++++++++++||+.+||++....   ...+..++..+..+.... .  +++ .++|+|++
T Consensus       184 -~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  262 (357)
T 2x6t_A          184 -LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  262 (357)
T ss_dssp             -SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred             -CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence             678999999999999999888899999999999999976432   134556667777776544 3  346 88999999


Q ss_pred             HHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC-CC-----CCCCceeechHHHHHhCC-ccc-c
Q 020924          230 DVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKS-FT-----EKEDEVMLTSEKLQKLGW-SYR-S  300 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~-~~-----~~~~~~~~d~~k~~~lg~-~~~-~  300 (319)
                      |+|++++.+++++. +++|+++ +..+|+.|+++.+.+.+|...++.. .+     .......+|++|+++||| .|. +
T Consensus       263 Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~  341 (357)
T 2x6t_A          263 DVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKT  341 (357)
T ss_dssp             HHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCC
T ss_pred             HHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCCC
Confidence            99999999998876 6789886 5899999999999999985311111 01     112346789999999999 676 9


Q ss_pred             HHHHHHHHHHHHHHc
Q 020924          301 LEETLVDSVESYKKV  315 (319)
Q Consensus       301 ~~~~l~~~~~~~~~~  315 (319)
                      ++++|+++++||+++
T Consensus       342 l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          342 VAEGVTEYMAWLNRD  356 (357)
T ss_dssp             HHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999999763

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=3.4e-43  Score=306.36  Aligned_cols=289  Identities=18%  Similarity=0.218  Sum_probs=225.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            7 RVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      +|||||||||||++++++|+++  |++|++++|+....            .+++++.+|++|.+++.++++  ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            5999999999999999999998  89999999876532            146788999999999999998  8999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +|+........+ +...+++|+.++.+++++|++.++++|||+||.++++...   ...+.+|+++..|      .++|+
T Consensus        69 ~a~~~~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~---~~~~~~e~~~~~p------~~~Y~  138 (317)
T 3ajr_A           69 LAGILSAKGEKD-PALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPET---PKNKVPSITITRP------RTMFG  138 (317)
T ss_dssp             CCCCCHHHHHHC-HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTS---CSSSBCSSSCCCC------CSHHH
T ss_pred             CCcccCCccccC-hHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCC---CCCCccccccCCC------CchHH
Confidence            998643211123 3678999999999999999999999999999977665432   2345667765544      78899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHH
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~  236 (319)
                      .+|.++|.+++.++++++++++++||+++||+...+..   ......+.+...+....   .+++.++|+|++|+|++++
T Consensus       139 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  218 (317)
T 3ajr_A          139 VTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALV  218 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHH
Confidence            99999999999988878999999999999997643221   12233334444444322   3458899999999999999


Q ss_pred             HhhccCCC----CceEEEecccCCHHHHHHHHHHhCCCCCCCCCCC-----CCCCceeechHHHHH-hCCccc-cHHHHH
Q 020924          237 LAYEKAEA----EGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFT-----EKEDEVMLTSEKLQK-LGWSYR-SLEETL  305 (319)
Q Consensus       237 ~~~~~~~~----~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~-----~~~~~~~~d~~k~~~-lg~~~~-~~~~~l  305 (319)
                      .+++++..    +++|++++..+|+.|+++.+.+.+|...++....     .......+|++|+++ |||+|. ++++++
T Consensus       219 ~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l  298 (317)
T 3ajr_A          219 DLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTI  298 (317)
T ss_dssp             HHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHH
T ss_pred             HHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHH
Confidence            99987643    3589988888999999999999998433221110     011235689999998 999998 999999


Q ss_pred             HHHHHHHHHcCC
Q 020924          306 VDSVESYKKVGI  317 (319)
Q Consensus       306 ~~~~~~~~~~~~  317 (319)
                      +++++|++++..
T Consensus       299 ~~~~~~~~~~~~  310 (317)
T 3ajr_A          299 DDMIDHISEKLG  310 (317)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHhhhc
Confidence            999999987643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1e-42  Score=304.99  Aligned_cols=290  Identities=18%  Similarity=0.196  Sum_probs=225.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--Ccce
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNG   79 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   79 (319)
                      ++++|+|||||||||||++++++|+++|++|++++|+..... .....    ..+++++.+|++|.+++.++++  ++|+
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~----l~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR-EVLPP----VAGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG-GGSCS----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch-hhhhc----cCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            467789999999999999999999999999999999754321 01111    1478999999999999999998  8999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      |||+||..... ..+.+.  +++|+.++.+++++|++.++++|||+||.++++....  ...+++|++  .+      .+
T Consensus        92 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~--~~~~~~E~~--~~------~~  158 (330)
T 2pzm_A           92 VVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPAT--VPIPIDSPT--AP------FT  158 (330)
T ss_dssp             EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSS--SSBCTTCCC--CC------CS
T ss_pred             EEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCcc--CCCCcCCCC--CC------CC
Confidence            99999976542 122223  8999999999999999999999999999876543211  012677776  22      57


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHH-HHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAE-ALL  236 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~-~~~  236 (319)
                      .|+.+|.++|.+++.+    +++++++||+++|||+..  ...+..++.....+. ..  .+. .++|+|++|+|+ +++
T Consensus       159 ~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~  230 (330)
T 2pzm_A          159 SYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADL  230 (330)
T ss_dssp             HHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHH
Confidence            7999999999998876    789999999999999852  234455556665555 22  334 789999999999 999


Q ss_pred             HhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCCCCCCC-CCCCCceeechHHH-----HHhCCccc-cHHHHHHHH
Q 020924          237 LAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYNYPKSF-TEKEDEVMLTSEKL-----QKLGWSYR-SLEETLVDS  308 (319)
Q Consensus       237 ~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~k~-----~~lg~~~~-~~~~~l~~~  308 (319)
                      .+++.+. +++|++++ ..+|+.|+++.+.+.+|..++.... ........+|++|+     ++|||+|. +++++|+++
T Consensus       231 ~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~  309 (330)
T 2pzm_A          231 SLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQ  309 (330)
T ss_dssp             HTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCSSCCCEECCCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred             HHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCCCceeCCCCcchhhccCCHHHHhhchHHHcCCcccCCHHHHHHHH
Confidence            9998765 66898875 7899999999999999853111100 01234567777777     77999997 999999999


Q ss_pred             HHHHHHcCCC
Q 020924          309 VESYKKVGIL  318 (319)
Q Consensus       309 ~~~~~~~~~~  318 (319)
                      ++||++++.+
T Consensus       310 ~~~~~~~~~~  319 (330)
T 2pzm_A          310 LAWYDKYGVT  319 (330)
T ss_dssp             HHHHHHHCSC
T ss_pred             HHHHHhhCcc
Confidence            9999999876

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-43  Score=302.82  Aligned_cols=268  Identities=16%  Similarity=0.092  Sum_probs=220.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+|||||||||||++++++|+++|++|++++|..                      +|++|.+.+.++++  ++|+|||+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------~D~~d~~~~~~~~~~~~~d~vi~~   63 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL----------------------LDITNISQVQQVVQEIRPHIIIHC   63 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT----------------------SCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc----------------------cCCCCHHHHHHHHHhcCCCEEEEC
Confidence            3899999999999999999999999999999831                      69999999999998  69999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+........+.+...+++|+.++.+++++|++.++ ||||+||.++|++.    ...+++|+++..|      .++|+.
T Consensus        64 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~----~~~~~~E~~~~~p------~~~Y~~  132 (287)
T 3sc6_A           64 AAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGD----RPEGYDEFHNPAP------INIYGA  132 (287)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCC----CSSCBCTTSCCCC------CSHHHH
T ss_pred             CcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCC----CCCCCCCCCCCCC------CCHHHH
Confidence            997654322233478999999999999999999998 79999997765543    3578899987655      788999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccC
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +|.++|.+++.++.    +++++||+.+||+...   ..+..++.....+.+.. .+++.++|+|++|+|++++.+++++
T Consensus       133 sK~~~E~~~~~~~~----~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  205 (287)
T 3sc6_A          133 SKYAGEQFVKELHN----KYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTS  205 (287)
T ss_dssp             HHHHHHHHHHHHCS----SEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHhCC----CcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCC
Confidence            99999999998754    6799999999998643   34555666666666655 6678899999999999999999987


Q ss_pred             CCCceEEEec-ccCCHHHHHHHHHHhCCCCC----CC----CCCCCCCCceeechHHHHHhCCccc-cHHHHHHHHHHHH
Q 020924          243 EAEGRYICTA-HMIRARDLVDKLKSLYPNYN----YP----KSFTEKEDEVMLTSEKLQKLGWSYR-SLEETLVDSVESY  312 (319)
Q Consensus       243 ~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~----~~----~~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~  312 (319)
                      . +++|++++ ..+|+.|+++.+.+.+|...    ++    ...........+|++|++.|||.|. +++++|+++++|+
T Consensus       206 ~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~  284 (287)
T 3sc6_A          206 L-YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIET  284 (287)
T ss_dssp             C-CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHT
T ss_pred             C-CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHH
Confidence            7 67898765 78999999999999998421    11    1112223457899999999999998 9999999999998


Q ss_pred             HH
Q 020924          313 KK  314 (319)
Q Consensus       313 ~~  314 (319)
                      ++
T Consensus       285 ~~  286 (287)
T 3sc6_A          285 KS  286 (287)
T ss_dssp             C-
T ss_pred             hc
Confidence            65

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-43  Score=303.59  Aligned_cols=287  Identities=16%  Similarity=0.144  Sum_probs=214.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-----cceE
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-----CNGV   80 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~d~v   80 (319)
                      +|||||||||||++++++|+++| ++|++++|+........+.       ++. +.+|++|.+.+..++++     +|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-------cce-eccccccHHHHHHHHhccccCCCcEE
Confidence            58999999999999999999999 9999999987643222222       223 67899999999999875     9999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+|+.... . ...+...+++|+.++.+++++|++.++ +|||+||.++|+..    ...+++|+++..|      .++
T Consensus        73 i~~a~~~~~-~-~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~----~~~~~~E~~~~~p------~~~  139 (310)
T 1eq2_A           73 FHEGACSST-T-EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR----TSDFIESREYEKP------LNV  139 (310)
T ss_dssp             EECCSCCCT-T-CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTC----CSCBCSSGGGCCC------SSH
T ss_pred             EECcccccC-c-ccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCC----CCCCCCCCCCCCC------CCh
Confidence            999997654 2 233478899999999999999999999 99999997765433    2447788775544      678


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccc-c--CCc-ccccccHHHHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYES-L--ENK-LRMIVDVRDVAE  233 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~-~~~~i~v~D~a~  233 (319)
                      |+.+|.++|.+++.++++++++++++||+.+||+.....   ...+..++.....+.+.. .  |++ .++|+|++|+|+
T Consensus       140 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence            999999999999999888899999999999999975421   234556667777776544 3  447 899999999999


Q ss_pred             HHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCCC-C-----CCCCceeechHHHHHhCC-ccc-cHHHH
Q 020924          234 ALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKSF-T-----EKEDEVMLTSEKLQKLGW-SYR-SLEET  304 (319)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~-~-----~~~~~~~~d~~k~~~lg~-~~~-~~~~~  304 (319)
                      +++.+++++. +++|+++ +..+|+.|+++.+.+.+|...+.... +     .......+|++|+++||| .|. +++++
T Consensus       220 ~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~  298 (310)
T 1eq2_A          220 VNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEG  298 (310)
T ss_dssp             HHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHH
T ss_pred             HHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHH
Confidence            9999998876 6789886 58999999999999998843111110 1     112346789999999999 676 99999


Q ss_pred             HHHHHHHHHHc
Q 020924          305 LVDSVESYKKV  315 (319)
Q Consensus       305 l~~~~~~~~~~  315 (319)
                      |+++++||+++
T Consensus       299 l~~~~~~~~~~  309 (310)
T 1eq2_A          299 VTEYMAWLNRD  309 (310)
T ss_dssp             HHHHHHHTC--
T ss_pred             HHHHHHHHHhc
Confidence            99999999764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=7e-43  Score=311.98  Aligned_cols=298  Identities=17%  Similarity=0.144  Sum_probs=228.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc----cCC-CeEEEEccCCChhhHHHHhcC--cc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK----ASE-NLKLFKADLLDYDSVKSAIVG--CN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~-~~~~~~~Dl~~~~~~~~~~~~--~d   78 (319)
                      |+|||||||||||++++++|+++|++|++++|+........+..+..    .+. +++++.+|++|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999865311111111100    012 788999999999999999885  69


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-----EEEEeccccccccCCCCCCCcccCCCCCCCccc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-----RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-----~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  153 (319)
                      +|||+|+........+.+...+++|+.++.+++++|++.+++     +|||+||.++|+..    .. +++|+++..|  
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~----~~-~~~E~~~~~~--  181 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST----PP-PQSETTPFHP--  181 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS----CS-SBCTTSCCCC--
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCC----CC-CCCCCCCCCC--
Confidence            999999975432111223678999999999999999988765     99999997765543    23 7888876554  


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc----cCCccccccc
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES----LENKLRMIVD  227 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~i~  227 (319)
                          .+.|+.+|.++|.+++.++.+++++++++|++++|||+.....  ..+..++.+...+....    .+++.++|+|
T Consensus       182 ----~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~  257 (381)
T 1n7h_A          182 ----RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  257 (381)
T ss_dssp             ----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEE
Confidence                6789999999999999998888999999999999999754321  12234445555665322    3458899999


Q ss_pred             HHHHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCC-----CCC--CCCCCCCceeechHHHHH-hCCcc
Q 020924          228 VRDVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYN-----YPK--SFTEKEDEVMLTSEKLQK-LGWSY  298 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~-----~~~--~~~~~~~~~~~d~~k~~~-lg~~~  298 (319)
                      ++|+|++++.+++.+. .++|+++ +..+|+.|+++.+.+.+|...     +..  ..+.......+|++|+++ |||+|
T Consensus       258 v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  336 (381)
T 1n7h_A          258 AGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKP  336 (381)
T ss_dssp             HHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcc
Confidence            9999999999998765 4788776 578999999999999998421     111  111222446789999998 99999


Q ss_pred             c-cHHHHHHHHHHHHHHc
Q 020924          299 R-SLEETLVDSVESYKKV  315 (319)
Q Consensus       299 ~-~~~~~l~~~~~~~~~~  315 (319)
                      . +++++|+++++||.++
T Consensus       337 ~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          337 QVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             CSCHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHhh
Confidence            7 9999999999999864

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=2.4e-43  Score=304.77  Aligned_cols=275  Identities=13%  Similarity=0.020  Sum_probs=221.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~   83 (319)
                      |+|||||||||||++++++|+ +|++|++++|+..                  ++.+|++|.+++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~~~d~vih~   61 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKLRPDVIVNA   61 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence            479999999999999999999 8999999998752                  245899999999999986  9999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+..........+...+++|+.++.+++++|++.++ ||||+||.++|++.    ...+++|+++..|      .++|+.
T Consensus        62 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~----~~~~~~E~~~~~p------~~~Y~~  130 (299)
T 1n2s_A           62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGT----GDIPWQETDATSP------LNVYGK  130 (299)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCC----TTCCBCTTSCCCC------SSHHHH
T ss_pred             cccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCC----CCCCCCCCCCCCC------ccHHHH
Confidence            997543211233478899999999999999999887 89999997765543    2467888886655      678999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccC
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +|.++|.+++.++.    +++++||+++||+...   ..+..++.....+.+.. .+++.++|+|++|+|++++.+++++
T Consensus       131 sK~~~E~~~~~~~~----~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  203 (299)
T 1n2s_A          131 TKLAGEKALQDNCP----KHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVA  203 (299)
T ss_dssp             HHHHHHHHHHHHCS----SEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC----CeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHh
Confidence            99999999988743    8999999999999754   34455666666776654 6678899999999999999999876


Q ss_pred             --C--CCceEEEec-ccCCHHHHHHHHHHhCCCCC----------CCC----CCCCCCCceeechHHHHH-hCCccccHH
Q 020924          243 --E--AEGRYICTA-HMIRARDLVDKLKSLYPNYN----------YPK----SFTEKEDEVMLTSEKLQK-LGWSYRSLE  302 (319)
Q Consensus       243 --~--~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~----------~~~----~~~~~~~~~~~d~~k~~~-lg~~~~~~~  302 (319)
                        .  .+++|++++ +.+|+.|+++.+.+.+|...          .+.    ..........+|++|+++ |||+|++++
T Consensus       204 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  283 (299)
T 1n2s_A          204 LNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWE  283 (299)
T ss_dssp             HHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHH
T ss_pred             ccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCCHH
Confidence              2  356898765 88999999999999886211          110    001122457899999998 999999999


Q ss_pred             HHHHHHHHHHHHcCC
Q 020924          303 ETLVDSVESYKKVGI  317 (319)
Q Consensus       303 ~~l~~~~~~~~~~~~  317 (319)
                      ++|+++++||+++.-
T Consensus       284 ~~l~~~~~~~~~~~~  298 (299)
T 1n2s_A          284 LGVKRMLTEMFTTTT  298 (299)
T ss_dssp             HHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999999998754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.5e-42  Score=301.94  Aligned_cols=280  Identities=18%  Similarity=0.188  Sum_probs=195.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~   82 (319)
                      +|+|||||||||||++++++|+++|++|++++|+...             ++  ++.+|++|.+++.+++++  +|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            4689999999999999999999999999999987542             12  677999999999998875  899999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +||..........+...+++|+.++.+++++|++.++ +|||+||.+++++ .    ..+++|+++..|      .+.|+
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~----~~~~~E~~~~~~------~~~Y~  134 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-T----NPPYREEDIPAP------LNLYG  134 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-S----SCSBCTTSCCCC------CSHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-C----CCCCCCCCCCCC------cCHHH
Confidence            9997654322334478899999999999999999887 9999999876554 2    567888886554      67899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHH-hcCccc-cCCcccccccHHHHHHHHHHhhc
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL-KEGYES-LENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      .+|.++|.+++.+    +++++++||+.+||+........+..++.... .+.... .+++.++|+|++|+|++++.+++
T Consensus       135 ~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  210 (315)
T 2ydy_A          135 KTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAE  210 (315)
T ss_dssp             HHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHH
Confidence            9999999999886    46679999999999876522123333445554 455443 56688999999999999999987


Q ss_pred             cC----CCCceEEEec-ccCCHHHHHHHHHHhCCCCC-----CCC---CCCCCCCceeechHHHHHhCCccc-cHHHHHH
Q 020924          241 KA----EAEGRYICTA-HMIRARDLVDKLKSLYPNYN-----YPK---SFTEKEDEVMLTSEKLQKLGWSYR-SLEETLV  306 (319)
Q Consensus       241 ~~----~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~-----~~~---~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~  306 (319)
                      +.    ..+++|++++ ..+|+.|+++.+.+.+|...     ++.   ..........+|++|++++||+|. +++++|+
T Consensus       211 ~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~  290 (315)
T 2ydy_A          211 KRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIK  290 (315)
T ss_dssp             HHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHH
T ss_pred             hhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHH
Confidence            64    3456887764 89999999999999998421     111   011122457899999998999987 9999999


Q ss_pred             HHHHHHHHc
Q 020924          307 DSVESYKKV  315 (319)
Q Consensus       307 ~~~~~~~~~  315 (319)
                      ++++||+++
T Consensus       291 ~~~~~~~~~  299 (315)
T 2ydy_A          291 ESLWPFLID  299 (315)
T ss_dssp             HHHGGGCC-
T ss_pred             HHHHHHccc
Confidence            999998765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.4e-42  Score=305.60  Aligned_cols=298  Identities=14%  Similarity=0.064  Sum_probs=230.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCC-------CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRD-------YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      .|++|+|||||||||||++++++|+++|       ++|++++|+......       ....+++++.+|++|.+++.+++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHHHH
Confidence            4678899999999999999999999999       899999997653211       01346889999999999999998


Q ss_pred             c-CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-----CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           75 V-GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-----VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        75 ~-~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-----~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      + ++|+|||+||...... .+.+...+++|+.++.+++++|++.+     +++|||+||.++++..    ...+++|+++
T Consensus        84 ~~~~d~vih~A~~~~~~~-~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----~~~~~~E~~~  158 (342)
T 2hrz_A           84 EARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP----LPYPIPDEFH  158 (342)
T ss_dssp             HTCCSEEEECCCCCHHHH-HHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS----CCSSBCTTCC
T ss_pred             hcCCCEEEECCccCcccc-cccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC----CCCCcCCCCC
Confidence            5 8999999998653211 12236789999999999999999876     7899999997655432    2467888887


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccC-CCCCCC--CCccHHHHHHHHhcCccc---cCCcc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLG-PLLQSK--VNTSSLVLIKLLKEGYES---LENKL  222 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G-~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~  222 (319)
                      ..|      .++|+.+|.++|.++++++++++++++++|++.+|| |+....  ..++..++.....+.+..   .++..
T Consensus       159 ~~~------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T 2hrz_A          159 TTP------LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR  232 (342)
T ss_dssp             CCC------SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred             CCC------cchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence            654      678999999999999999888889999999999998 553221  123445566666666543   22356


Q ss_pred             cccccHHHHHHHHHHhhccCC----CCceEEEecccCCHHHHHHHHHHhCCCCC--CCCCCCC-------CCCceeechH
Q 020924          223 RMIVDVRDVAEALLLAYEKAE----AEGRYICTAHMIRARDLVDKLKSLYPNYN--YPKSFTE-------KEDEVMLTSE  289 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~~~s~~e~~~~~~~~~g~~~--~~~~~~~-------~~~~~~~d~~  289 (319)
                      .+++|++|+|++++.+++.+.    .+++||+++..+|+.|+++.+.+.+|...  .....+.       ......+|++
T Consensus       233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  312 (342)
T 2hrz_A          233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAK  312 (342)
T ss_dssp             EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCH
T ss_pred             eeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChH
Confidence            778999999999999998754    34589888888999999999999987321  1111111       0112368999


Q ss_pred             HHHHhCCccc-cHHHHHHHHHHHHHHcCCC
Q 020924          290 KLQKLGWSYR-SLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       290 k~~~lg~~~~-~~~~~l~~~~~~~~~~~~~  318 (319)
                      |+++|||+|. +++++|+++++|++ .|.+
T Consensus       313 k~~~lG~~p~~~l~e~l~~~~~~~~-~~~~  341 (342)
T 2hrz_A          313 RARELGFTAESSFEEIIQVHIEDEL-GGSL  341 (342)
T ss_dssp             HHHHTTCCCCSSHHHHHHHHHHHHS-TTCC
T ss_pred             HHHHcCCCCCCCHHHHHHHHHHHhc-CCCC
Confidence            9988999998 99999999999998 4444

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=1.6e-41  Score=325.19  Aligned_cols=308  Identities=15%  Similarity=0.146  Sum_probs=228.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh--HHHHHhhhccCCCeEEEEccCCChhhHHHHhc--C
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK--NARLYELEKASENLKLFKADLLDYDSVKSAIV--G   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   76 (319)
                      |++++|+|||||||||||++++++|+++|++|++++|+.....  ...+..+  ...+++++.+|++|.+++.++++  +
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~v~~v~~Dl~d~~~l~~~~~~~~   84 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYK   84 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc--cCCceEEEEcCCCCHHHHHHHHHhCC
Confidence            3466789999999999999999999999999999999754321  1112211  13578899999999999999998  7


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccccc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  156 (319)
                      +|+|||+||........+.....+++|+.++.+++++|++.++++||++||.++++.....+...+++|+++..|     
T Consensus        85 ~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p-----  159 (699)
T 1z45_A           85 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGP-----  159 (699)
T ss_dssp             CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC-----
T ss_pred             CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCC-----
Confidence            999999999754211111225688999999999999999999999999999776543321122356778776544     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhh--CCceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhc--Cccc-c-----
Q 020924          157 TNNWYCLSKTEAESEALEFGKK--TGLDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKE--GYES-L-----  218 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~--~~~~-~-----  218 (319)
                       .++|+.+|.++|.+++.++.+  .+++++++||+++||+.....        ...+..++.+...+  .++. .     
T Consensus       160 -~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  238 (699)
T 1z45_A          160 -TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD  238 (699)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred             -CChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCccc
Confidence             678999999999999998776  689999999999999853211        11223344444433  2322 2     


Q ss_pred             ---CCcccccccHHHHHHHHHHhhccC------C-CCceEEEe-cccCCHHHHHHHHHHhCCCCCCCCC----CCCCCCc
Q 020924          219 ---ENKLRMIVDVRDVAEALLLAYEKA------E-AEGRYICT-AHMIRARDLVDKLKSLYPNYNYPKS----FTEKEDE  283 (319)
Q Consensus       219 ---~~~~~~~i~v~D~a~~~~~~~~~~------~-~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~----~~~~~~~  283 (319)
                         |++.++|||++|+|++++.+++..      . .+++||++ +..+|+.|+++.+.+.+|. +++..    .......
T Consensus       239 ~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~  317 (699)
T 1z45_A          239 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRRAGDVLN  317 (699)
T ss_dssp             -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC---------CCC
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCC-CCCceecCCCCCcccc
Confidence               457899999999999999998742      1 23478775 5889999999999999874 22221    1223355


Q ss_pred             eeechHHHHH-hCCccc-cHHHHHHHHHHHHHHcCC
Q 020924          284 VMLTSEKLQK-LGWSYR-SLEETLVDSVESYKKVGI  317 (319)
Q Consensus       284 ~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~  317 (319)
                      ..+|++|+++ |||+|. +++++|+++++|++++..
T Consensus       318 ~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~  353 (699)
T 1z45_A          318 LTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF  353 (699)
T ss_dssp             CCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             ccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence            8899999988 999998 999999999999998753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-42  Score=296.34  Aligned_cols=266  Identities=15%  Similarity=0.105  Sum_probs=215.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |+|||||||||||++++++|+++|++|++++|+.                      +|++|.+++.++++  ++|+|||+
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------~Dl~d~~~~~~~~~~~~~d~vih~   70 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEKKPNVVINC   70 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------------------CCCCCHHHHHHHHHhcCCCEEEEC
Confidence            6899999999999999999999999999998851                      69999999999998  79999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+........+.+...+++|+.++.+++++|++.++ +|||+||.++|++.    ...+++|+++..|      .++|+.
T Consensus        71 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~----~~~~~~E~~~~~~------~~~Y~~  139 (292)
T 1vl0_A           71 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGE----AKEPITEFDEVNP------QSAYGK  139 (292)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSC----CSSCBCTTSCCCC------CSHHHH
T ss_pred             CccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCC----CCCCCCCCCCCCC------ccHHHH
Confidence            996543111123477899999999999999999888 99999997765543    2467888887654      678999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccC
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +|.++|.+++.++    .+++++||+.+||+ ..   ..+..++.....+.+.. .+++.++|+|++|+|++++.+++.+
T Consensus       140 sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          140 TKLEGENFVKALN----PKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             HHHHHHHHHHHHC----SSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence            9999999998874    36899999999999 22   34455556666666554 5678899999999999999999876


Q ss_pred             CCCceEEEec-ccCCHHHHHHHHHHhCCCCC----CCCC----CCCCCCceeechHHHHH-hCCccccHHHHHHHHHHHH
Q 020924          243 EAEGRYICTA-HMIRARDLVDKLKSLYPNYN----YPKS----FTEKEDEVMLTSEKLQK-LGWSYRSLEETLVDSVESY  312 (319)
Q Consensus       243 ~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~----~~~~----~~~~~~~~~~d~~k~~~-lg~~~~~~~~~l~~~~~~~  312 (319)
                       .+++|++++ ..+|+.|+++.+.+.+|...    ++..    .........+|++|+++ |||+|++++++|+++++||
T Consensus       212 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~  290 (292)
T 1vl0_A          212 -NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLL  290 (292)
T ss_dssp             -CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHH
T ss_pred             -CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHh
Confidence             566887765 88999999999999988321    1211    11122457899999999 9999999999999999998


Q ss_pred             H
Q 020924          313 K  313 (319)
Q Consensus       313 ~  313 (319)
                      +
T Consensus       291 ~  291 (292)
T 1vl0_A          291 Q  291 (292)
T ss_dssp             T
T ss_pred             c
Confidence            6

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=8.7e-42  Score=324.61  Aligned_cols=305  Identities=17%  Similarity=0.269  Sum_probs=236.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh-HHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS-VKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~v   80 (319)
                      +++|+|||||||||||++++++|+++ |++|++++|+......     +. ...+++++.+|++|.++ +..+++++|+|
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~-----~~-~~~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR-----FL-NHPHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG-----GT-TCTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh-----hc-cCCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            35789999999999999999999998 8999999998654211     10 13578999999999765 77788899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccc-ccCCc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC-RTTNN  159 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~  159 (319)
                      ||+||..........+...+++|+.++.+++++|++.+ ++|||+||.++|+..    ...+++|+++..+..+ ..+.+
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~----~~~~~~E~~~~~~~~p~~~p~~  461 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMC----SDKYFDEDHSNLIVGPVNKPRW  461 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTC----CSSSBCTTTCCEEECCTTCTTH
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCC----CCcccCCCccccccCcccCCCC
Confidence            99999754321112236789999999999999999998 899999997766543    2457888876422111 13467


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCC-------CCCccHHHHHHHHhcCccc---cCCcccccccHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQS-------KVNTSSLVLIKLLKEGYES---LENKLRMIVDVR  229 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~  229 (319)
                      .|+.||.++|.+++.++++++++++++||+++||+....       ....+..++.+...+.+..   .+++.++|+|++
T Consensus       462 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~  541 (660)
T 1z7e_A          462 IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR  541 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHH
T ss_pred             CcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHH
Confidence            899999999999999988789999999999999998642       1234566777777777654   345889999999


Q ss_pred             HHHHHHHHhhccCC---CCceEEEec-c-cCCHHHHHHHHHHhCCCC----CCCCCCC--------------CCCCceee
Q 020924          230 DVAEALLLAYEKAE---AEGRYICTA-H-MIRARDLVDKLKSLYPNY----NYPKSFT--------------EKEDEVML  286 (319)
Q Consensus       230 D~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~~~~~~g~~----~~~~~~~--------------~~~~~~~~  286 (319)
                      |+|++++.+++.+.   .+++|++++ + .+|+.|+++.+.+.+|..    .++....              .......+
T Consensus       542 Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  621 (660)
T 1z7e_A          542 DGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKP  621 (660)
T ss_dssp             HHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCB
T ss_pred             HHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhccc
Confidence            99999999998764   344788875 4 799999999999988631    1222110              11235778


Q ss_pred             chHHHHH-hCCccc-cHHHHHHHHHHHHHHcCCC
Q 020924          287 TSEKLQK-LGWSYR-SLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       287 d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~~  318 (319)
                      |++|+++ |||+|. +++++|+++++||+++..+
T Consensus       622 d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~  655 (660)
T 1z7e_A          622 SIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred             CHHHHHHhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence            9999998 999997 9999999999999987653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=2.5e-40  Score=284.08  Aligned_cols=261  Identities=15%  Similarity=0.141  Sum_probs=205.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +||+|||||| ||||++++++|+++|++|++++|+..+.  ..+..     .+++++.+|++|.+     +.++|+|||+
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-----~~~~~~~~D~~d~~-----~~~~d~vi~~   70 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM--EAIRA-----SGAEPLLWPGEEPS-----LDGVTHLLIS   70 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH--HHHHH-----TTEEEEESSSSCCC-----CTTCCEEEEC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh--hhHhh-----CCCeEEEecccccc-----cCCCCEEEEC
Confidence            4579999998 9999999999999999999999987532  22221     47899999999954     7899999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHh--CCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE--AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~--~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      |+.....   ++          .+.++++++++  .++++|||+||.++|+..    ...+++|+++..|      .++|
T Consensus        71 a~~~~~~---~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~----~~~~~~E~~~~~p------~~~Y  127 (286)
T 3ius_A           71 TAPDSGG---DP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDH----DGAWVDETTPLTP------TAAR  127 (286)
T ss_dssp             CCCBTTB---CH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCC----TTCEECTTSCCCC------CSHH
T ss_pred             CCccccc---cH----------HHHHHHHHHHhhcCCceEEEEeecceecCCC----CCCCcCCCCCCCC------CCHH
Confidence            9865431   11          25789999998  688999999997655433    3567899987665      6889


Q ss_pred             HhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHHhh
Q 020924          162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      +.+|.++|.+++.+   ++++++++||+++||++....        .++..+....  .+++.++|+|++|+|++++.++
T Consensus       128 ~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  196 (286)
T 3ius_A          128 GRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASM  196 (286)
T ss_dssp             HHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS--------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH--------HHHhcCCccccCCCCcccceEEHHHHHHHHHHHH
Confidence            99999999999987   589999999999999975432        2223444333  3358899999999999999999


Q ss_pred             ccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCC---CCCCCC--------CCceeechHHHHH-hCCccc--cHHHH
Q 020924          240 EKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYP---KSFTEK--------EDEVMLTSEKLQK-LGWSYR--SLEET  304 (319)
Q Consensus       240 ~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~---~~~~~~--------~~~~~~d~~k~~~-lg~~~~--~~~~~  304 (319)
                      +++..+++||++ +..+|+.|+++.+.+.+|.....   ......        .....+|++|+++ |||+|+  +++++
T Consensus       197 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~  276 (286)
T 3ius_A          197 ARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVG  276 (286)
T ss_dssp             HSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHH
T ss_pred             hCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHH
Confidence            988766699876 58899999999999999842111   111111        1457899999999 999998  59999


Q ss_pred             HHHHHHH
Q 020924          305 LVDSVES  311 (319)
Q Consensus       305 l~~~~~~  311 (319)
                      |+++++.
T Consensus       277 l~~~~~~  283 (286)
T 3ius_A          277 LEALQAD  283 (286)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9998864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=2.3e-39  Score=287.44  Aligned_cols=291  Identities=16%  Similarity=0.146  Sum_probs=223.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-----CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC---
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-----YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG---   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   76 (319)
                      +|+|||||||||||++++++|+++|     ++|++++|+.....      .  ...+++++.+|++|.+++.+++++   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~   72 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------H--EDNPINYVQCDISDPDDSQAKLSPLTD   72 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------C--CSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------c--ccCceEEEEeecCCHHHHHHHHhcCCC
Confidence            4789999999999999999999999     99999999876421      0  135789999999999999999988   


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEE-------EeccccccccCCCCCCCcccCCCC
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVI-------VVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv-------~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      +|+|||+|+....    + +...+++|+.++.+++++|++.  +++++|       |+||.++|+...  +...+++|++
T Consensus        73 ~d~vih~a~~~~~----~-~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~--~~~~~~~E~~  145 (364)
T 2v6g_A           73 VTHVFYVTWANRS----T-EQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIE--SHDPPYTEDL  145 (364)
T ss_dssp             CCEEEECCCCCCS----S-HHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSC--CCCSSBCTTS
T ss_pred             CCEEEECCCCCcc----h-HHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccc--cCCCCCCccc
Confidence            9999999986532    3 3788999999999999999988  789998       799976554321  1246788888


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhCC-ceEEEEecCcccCCCCCCCCC-ccHHHHHHHH---hcCccc-cCC-
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG-LDVVTICPNLVLGPLLQSKVN-TSSLVLIKLL---KEGYES-LEN-  220 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~lrp~~v~G~~~~~~~~-~~~~~~~~~~---~~~~~~-~~~-  220 (319)
                      +..|     +.+.|    ..+|.++++++++++ ++++++||+.+||+....... ....++.+.+   .+.+.. .++ 
T Consensus       146 ~~~~-----~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  216 (364)
T 2v6g_A          146 PRLK-----YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCK  216 (364)
T ss_dssp             CCCS-----SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCH
T ss_pred             cCCc-----cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCc
Confidence            6544     14567    458899988887777 999999999999998753322 2223233332   565544 332 


Q ss_pred             ----cccccccHHHHHHHHHHhhccCCC-CceEEEec-ccCCHHHHHHHHHHhCCCC------CCCCC------------
Q 020924          221 ----KLRMIVDVRDVAEALLLAYEKAEA-EGRYICTA-HMIRARDLVDKLKSLYPNY------NYPKS------------  276 (319)
Q Consensus       221 ----~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~~~~~~g~~------~~~~~------------  276 (319)
                          ...+++|++|+|++++.+++++.. +++||+++ ..+|+.|+++.+.+.+|..      .+|..            
T Consensus       217 ~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~  296 (364)
T 2v6g_A          217 AAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVW  296 (364)
T ss_dssp             HHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHH
T ss_pred             ccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHH
Confidence                446778889999999999987654 44898875 6899999999999998732      22221            


Q ss_pred             -----C---CCC---C------------Cc-eeechHHHHHhCCccc-cHHHHHHHHHHHHHHcCCCC
Q 020924          277 -----F---TEK---E------------DE-VMLTSEKLQKLGWSYR-SLEETLVDSVESYKKVGILN  319 (319)
Q Consensus       277 -----~---~~~---~------------~~-~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~~~~~~~~  319 (319)
                           .   ...   .            .. ..+|++|+++|||+|. +++++++++++||+++|.+|
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp  364 (364)
T 2v6g_A          297 EEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP  364 (364)
T ss_dssp             HHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence                 0   000   0            22 4799999988999987 99999999999999999986

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.3e-38  Score=271.73  Aligned_cols=269  Identities=17%  Similarity=0.168  Sum_probs=199.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |||||||||||||++|+++|+++||+|++++|++...             .   +..|    +...+.++++|+|||+|+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------------~---~~~~----~~~~~~l~~~d~vihla~   60 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------------R---ITWD----ELAASGLPSCDAAVNLAG   60 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------E---EEHH----HHHHHCCCSCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------------e---eecc----hhhHhhccCCCEEEEecc
Confidence            5799999999999999999999999999999986531             1   1111    233455678999999998


Q ss_pred             cCCCCCC----CCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           86 PAPSTTV----PNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        86 ~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      .......    .......++.|+.++.+|++++...+.  +++|+.||+++|+..    ...+.+|++|..+      .+
T Consensus        61 ~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~----~~~~~~E~~p~~~------~~  130 (298)
T 4b4o_A           61 ENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPS----LTAEYDEDSPGGD------FD  130 (298)
T ss_dssp             CCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCC----SSCCBCTTCCCSC------SS
T ss_pred             CcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCC----CCCcccccCCccc------cc
Confidence            5432211    111245788999999999999998765  458888886655433    3678888887655      56


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~  237 (319)
                      .|+..|...|...  .....+++++++||+.+||+...    .+..++.....+....  .|++.++|||++|+|++++.
T Consensus       131 ~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~----~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~  204 (298)
T 4b4o_A          131 FFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGG----AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTH  204 (298)
T ss_dssp             HHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTSH----HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCCC----chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHH
Confidence            6888877776543  33446899999999999999642    3344444444444333  55699999999999999999


Q ss_pred             hhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCC---CCCCCCC-----C-----CCceeechHHHHHhCCccc--cH
Q 020924          238 AYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYN---YPKSFTE-----K-----EDEVMLTSEKLQKLGWSYR--SL  301 (319)
Q Consensus       238 ~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~---~~~~~~~-----~-----~~~~~~d~~k~~~lg~~~~--~~  301 (319)
                      +++++...|+||++ ++++|++|+++.+++.+|...   +|.+...     .     .....++++|++++||+++  ++
T Consensus       205 ~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l  284 (298)
T 4b4o_A          205 ALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPEL  284 (298)
T ss_dssp             HHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSH
T ss_pred             HHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCH
Confidence            99998888899876 489999999999999998532   2211100     0     0235678899999999987  79


Q ss_pred             HHHHHHHHH
Q 020924          302 EETLVDSVE  310 (319)
Q Consensus       302 ~~~l~~~~~  310 (319)
                      +++|+++++
T Consensus       285 ~~al~~l~~  293 (298)
T 4b4o_A          285 GAALKEIAE  293 (298)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999886

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=1.2e-37  Score=265.49  Aligned_cols=259  Identities=18%  Similarity=0.154  Sum_probs=202.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~   83 (319)
                      |+|||||||||||++++++|+ +|++|++++|+....            ++   +.+|++|.+++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~   64 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------------GG---YKLDLTDFPRLEDFIIKKRPDVIINA   64 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------------TC---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------------CC---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence            479999999999999999999 489999999987421            12   78999999999999986  9999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      ||........+.+...+++|+.++.+++++|++.+. +|||+||.+++.+.     ..+++|+++..|      .+.|+.
T Consensus        65 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~-----~~~~~e~~~~~~------~~~Y~~  132 (273)
T 2ggs_A           65 AAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGE-----KGNYKEEDIPNP------INYYGL  132 (273)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSS-----SCSBCTTSCCCC------SSHHHH
T ss_pred             CcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCC-----CCCcCCCCCCCC------CCHHHH
Confidence            996543211123478899999999999999999887 99999998776543     237888876554      678999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccC
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +|.++|.+++.      ++++++||+.+||+.     .....++.....+.+.. .++ .++++|++|+|++++.+++++
T Consensus       133 sK~~~e~~~~~------~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          133 SKLLGETFALQ------DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELR  200 (273)
T ss_dssp             HHHHHHHHHCC------TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhC------CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcC
Confidence            99999998866      567999999999821     23334445555555444 444 889999999999999999876


Q ss_pred             CCCceEEEecccCCHHHHHHHHHHhCCCCC-C--C----CCCCCCCCceeechHHHHH-hCCcc-c-cHHHHH
Q 020924          243 EAEGRYICTAHMIRARDLVDKLKSLYPNYN-Y--P----KSFTEKEDEVMLTSEKLQK-LGWSY-R-SLEETL  305 (319)
Q Consensus       243 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~-~--~----~~~~~~~~~~~~d~~k~~~-lg~~~-~-~~~~~l  305 (319)
                      . .++|++++..+|+.|+++.+.+.+|... +  +    ...........+|++|+++ |||+| . ++++++
T Consensus       201 ~-~g~~~i~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          201 K-TGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             C-CEEEECCCCCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             c-CCeEEECCCcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            4 5689887788999999999999998421 1  1    1112223457899999998 99999 4 888865

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=5.6e-37  Score=277.68  Aligned_cols=302  Identities=17%  Similarity=0.130  Sum_probs=221.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH-HHHHh-h---------hccCCCeEEEEccCCChhhHH
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYE-L---------EKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~-~---------~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      +.+|+|||||||||||++++++|++.|++|++++|+...... ..+.. +         .....+++++.+|++|.+.+.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            346799999999999999999999999999999999873211 11110 0         011368999999999988887


Q ss_pred             HHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCC-CCCCCcccCCCCCCC
Q 020924           72 SAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNP-RWPKGQIMDETCWSD  150 (319)
Q Consensus        72 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~-~~~~~~~~~E~~~~~  150 (319)
                       .+.++|+|||+||.....   .++...+++|+.++.+++++|.+ ++++|||+||.++ +... ..+...+++|+++..
T Consensus       147 -~~~~~d~Vih~A~~~~~~---~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~  220 (427)
T 4f6c_A          147 -LPENMDTIIHAGARTDHF---GDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK  220 (427)
T ss_dssp             -CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS
T ss_pred             -CcCCCCEEEECCcccCCC---CCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccccc
Confidence             777899999999976532   33478899999999999999999 7889999999876 3211 112467888888744


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC------CccHHHHHHHHhcCcccc--CCcc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV------NTSSLVLIKLLKEGYESL--ENKL  222 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~  222 (319)
                      +.   .+.+.|+.+|.++|.+++.+++ .|++++++||++|||+......      ..+..++.....+.....  ++..
T Consensus       221 ~~---~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (427)
T 4f6c_A          221 GQ---LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP  296 (427)
T ss_dssp             SC---CCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCE
T ss_pred             CC---CCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccce
Confidence            31   2478899999999999999865 5999999999999999765431      235566777777766653  5788


Q ss_pred             cccccHHHHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC--CC-----CC------------CCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK--SF-----TE------------KED  282 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~--~~-----~~------------~~~  282 (319)
                      ++|++++|+|++++.++..+..+++|+++ +.++++.|+++.+.+ ++...++.  +.     ..            ...
T Consensus       297 ~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  375 (427)
T 4f6c_A          297 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQDMYETIGLTSVDREQQ  375 (427)
T ss_dssp             ECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCHHHHHHHHHHHTSE
T ss_pred             EEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCchhhhhhhhccccCC
Confidence            99999999999999999887756689876 589999999999998 44100000  00     00            112


Q ss_pred             ceeechHHHH----HhCCccc-cHHHHHHHHHHHHHHc
Q 020924          283 EVMLTSEKLQ----KLGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       283 ~~~~d~~k~~----~lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      ...+|+++.+    ++||.+. .-++.++++++|+++.
T Consensus       376 ~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~  413 (427)
T 4f6c_A          376 LAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  413 (427)
T ss_dssp             ECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             ceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            3567777664    3799987 4455889999888764

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.7e-36  Score=251.40  Aligned_cols=223  Identities=20%  Similarity=0.214  Sum_probs=173.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+ +||+|||||||||||++++++|+++|++|++++|++....        ....+++++.+|++|.+++.++++++|+|
T Consensus         1 M~-~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   71 (227)
T 3dhn_A            1 ME-KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK--------IENEHLKVKKADVSSLDEVCEVCKGADAV   71 (227)
T ss_dssp             ---CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC--------CCCTTEEEECCCTTCHHHHHHHHTTCSEE
T ss_pred             CC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch--------hccCceEEEEecCCCHHHHHHHhcCCCEE
Confidence            55 3579999999999999999999999999999999865321        11257899999999999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+|+....    +  ...+++|+.++.+++++|++.++++|||+||.+++++.+     ....|+.+..|      .++
T Consensus        72 i~~a~~~~~----~--~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-----~~~~~~~~~~p------~~~  134 (227)
T 3dhn_A           72 ISAFNPGWN----N--PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAP-----GLRLMDSGEVP------ENI  134 (227)
T ss_dssp             EECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEET-----TEEGGGTTCSC------GGG
T ss_pred             EEeCcCCCC----C--hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCC-----CCccccCCcch------HHH
Confidence            999976422    2  248899999999999999999999999999988776653     22234443333      678


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc-cccCCcccccccHHHHHHHHHHhh
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY-ESLENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      |+.+|...|.+++.++++++++++++||+.+||+........         .+.. .......++|+|++|+|++++.++
T Consensus       135 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l  205 (227)
T 3dhn_A          135 LPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR---------LGKDDMIVDIVGNSHISVEDYAAAMIDEL  205 (227)
T ss_dssp             HHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE---------EESSBCCCCTTSCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee---------ecCCCcccCCCCCcEEeHHHHHHHHHHHH
Confidence            999999999999999877899999999999999976433111         1222 222223489999999999999999


Q ss_pred             ccCCCCc-eEEEec-ccCCHH
Q 020924          240 EKAEAEG-RYICTA-HMIRAR  258 (319)
Q Consensus       240 ~~~~~~~-~~~~~~-~~~s~~  258 (319)
                      +++...+ +|++++ ++.++.
T Consensus       206 ~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          206 EHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             HSCCCCSEEEEEECCSCCC--
T ss_pred             hCccccCcEEEEEeehhcccC
Confidence            9987655 787765 777664

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=7.6e-37  Score=268.78  Aligned_cols=236  Identities=16%  Similarity=0.225  Sum_probs=191.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC-CC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR-DY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++|+||||||||+||++++++|+++ |+ +|++++|++.+... ....+.  ..+++++.+|++|.+++.++++++|+|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~-~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSE-MAMEFN--DPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHH-HHHHHC--CTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHH-HHHHhc--CCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            56789999999999999999999999 97 99999997543211 111221  257899999999999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+||..........+...+++|+.++.+++++|++.++++||++||..++.+                        .++
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p------------------------~~~  151 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP------------------------INL  151 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC------------------------CSH
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC------------------------ccH
Confidence            99999754321111236789999999999999999999999999999654321                        456


Q ss_pred             HHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC-ccc--cCCcccccccHHHHHHH
Q 020924          161 YCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-YES--LENKLRMIVDVRDVAEA  234 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~i~v~D~a~~  234 (319)
                      |+.||.++|.+++.++++   .+++++++||+++||+..    ..+..++..+..+. ++.  .++..++|+|++|+|++
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~  227 (344)
T 2gn4_A          152 YGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSF  227 (344)
T ss_dssp             HHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHH
Confidence            999999999999998764   589999999999999863    34456666666776 444  45578899999999999


Q ss_pred             HHHhhccCCCCceEEEecccCCHHHHHHHHHHhCC
Q 020924          235 LLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYP  269 (319)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  269 (319)
                      ++.++++...+.+|++++..+|+.|+++.+.+..+
T Consensus       228 v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          228 VLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP  262 (344)
T ss_dssp             HHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred             HHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence            99999887655589888878999999999987664

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.8e-37  Score=285.49  Aligned_cols=275  Identities=13%  Similarity=0.084  Sum_probs=202.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +|+|||||||||||++|+++|+++|++|++++|+..+.               ..+.+|+.+.  +.++++++|+|||+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------~~v~~d~~~~--~~~~l~~~D~Vih~A  209 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------GKRFWDPLNP--ASDLLDGADVLVHLA  209 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------TCEECCTTSC--CTTTTTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------cceeecccch--hHHhcCCCCEEEECC
Confidence            78999999999999999999999999999999987632               1256787643  456678999999999


Q ss_pred             ccCCCC-CCCCccchhhhhHHHHHHHHHHH-HHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           85 CPAPST-TVPNPQMELLEPAVKGTLNVVKA-CLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        85 ~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~-~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +..... ...+....++++|+.++.+|+++ +++.++++|||+||+++|+...   ...+++|+++. +      .+.|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~---~~~~~~E~~~~-~------~~~y~  279 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDR---GDEILTEESES-G------DDFLA  279 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEE---EEEEECTTSCC-C------SSHHH
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCC---CCCccCCCCCC-C------cChHH
Confidence            975432 12233467889999999999999 5666889999999977654222   35678888865 2      57799


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHHhhc
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      .+|...|.++... ...|++++++||+++||+..    ..+..++.....+....  .|++.++|||++|+|++++.+++
T Consensus       280 ~~~~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~  354 (516)
T 3oh8_A          280 EVCRDWEHATAPA-SDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIV  354 (516)
T ss_dssp             HHHHHHHHTTHHH-HHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHh
Confidence            9999999876654 44699999999999999873    23333433333333333  45588999999999999999999


Q ss_pred             cCCCCceEEEe-cccCCHHHHHHHHHHhCCCC---CCCCCCCC-----C------CCceeechHHHHHhCCccc-c-HHH
Q 020924          241 KAEAEGRYICT-AHMIRARDLVDKLKSLYPNY---NYPKSFTE-----K------EDEVMLTSEKLQKLGWSYR-S-LEE  303 (319)
Q Consensus       241 ~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~---~~~~~~~~-----~------~~~~~~d~~k~~~lg~~~~-~-~~~  303 (319)
                      ++...++||++ +..+|+.|+++.+.+.+|..   ++|.....     .      .....++++|+++|||+|+ + +++
T Consensus       355 ~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e  434 (516)
T 3oh8_A          355 DAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGA  434 (516)
T ss_dssp             CTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHH
T ss_pred             CcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHH
Confidence            88777888766 58999999999999988732   22222111     1      1246789999999999998 5 999


Q ss_pred             HHHHHHHH
Q 020924          304 TLVDSVES  311 (319)
Q Consensus       304 ~l~~~~~~  311 (319)
                      +|+++++.
T Consensus       435 ~l~~~l~~  442 (516)
T 3oh8_A          435 AIAHELGY  442 (516)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHhCc
Confidence            99998864

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=3.9e-36  Score=277.78  Aligned_cols=300  Identities=17%  Similarity=0.130  Sum_probs=220.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH-HHH-Hhh---------hccCCCeEEEEccCCChhhHHHH
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARL-YEL---------EKASENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~-~~~---------~~~~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      +|+|||||||||||++++++|++.|++|++++|+...... ..+ ..+         .....+++++.+|+++.+.+. +
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  228 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  228 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence            5799999999999999999999999999999998874211 111 000         112468999999999988777 7


Q ss_pred             hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCC-CCCCCcccCCCCCCCcc
Q 020924           74 IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNP-RWPKGQIMDETCWSDKE  152 (319)
Q Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~-~~~~~~~~~E~~~~~~~  152 (319)
                      ..++|+|||||+....   ..++...+++|+.++.+++++|++ +.++|||+||.++ +... ......+++|+++..+.
T Consensus       229 ~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~  303 (508)
T 4f6l_B          229 PENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQ  303 (508)
T ss_dssp             SSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSB
T ss_pred             ccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccccc
Confidence            7789999999997643   234478899999999999999998 7789999999876 2211 11245788888874431


Q ss_pred             ccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC------CccHHHHHHHHhcCcccc--CCcccc
Q 020924          153 YCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV------NTSSLVLIKLLKEGYESL--ENKLRM  224 (319)
Q Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~  224 (319)
                         .+.+.|+.+|..+|.+++.+++ .|++++++||++|||+......      ..+..++.....+.....  +++.++
T Consensus       304 ---~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~  379 (508)
T 4f6l_B          304 ---LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVD  379 (508)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEE
T ss_pred             ---cCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEE
Confidence               2478899999999999999865 5999999999999999765431      235566666666665553  568899


Q ss_pred             cccHHHHHHHHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhCCCCCCC--CCC-----------------CCCCCce
Q 020924          225 IVDVRDVAEALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLYPNYNYP--KSF-----------------TEKEDEV  284 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~--~~~-----------------~~~~~~~  284 (319)
                      |+|++|+|++++.++..+..+++|++++ ..+++.|+++.+.+.. ...++  .+.                 .......
T Consensus       380 ~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~  458 (508)
T 4f6l_B          380 FSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQQLA  458 (508)
T ss_dssp             CEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEEC
T ss_pred             EEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccCcce
Confidence            9999999999999999877666898764 8899999999999754 10000  000                 0011235


Q ss_pred             eechHHH----HHhCCccc-cHHHHHHHHHHHHHHc
Q 020924          285 MLTSEKL----QKLGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       285 ~~d~~k~----~~lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      .+|+++.    +++||.+. .-++.++++++|+++.
T Consensus       459 ~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~  494 (508)
T 4f6l_B          459 MIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  494 (508)
T ss_dssp             EECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred             ecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence            6776665    34799987 5577788888888763

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4e-35  Score=268.66  Aligned_cols=257  Identities=23%  Similarity=0.176  Sum_probs=194.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC---CCeEEEEEcCCChhhH-HHHHhhhc-------------cCCCeEEEEccCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR---DYFVHGTAREPSDEKN-ARLYELEK-------------ASENLKLFKADLL   65 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~-~~~~~~~~-------------~~~~~~~~~~Dl~   65 (319)
                      .++|+|||||||||||++++++|+++   |++|++++|+...... ..+.+...             ...+++++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            46789999999999999999999998   9999999998774321 11111111             1358999999998


Q ss_pred             ------ChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCC
Q 020924           66 ------DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        66 ------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                            |.+.+..+++++|+|||+||....    .++...+++|+.++.+++++|++.++++|||+||.+++...    .
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~----~  222 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAI----E  222 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTS----C
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCcc----C
Confidence                  667899999999999999997654    33478899999999999999999999999999997654432    3


Q ss_pred             CcccCCCCCCCcccc-----ccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCC----CCCccHHHHHHH
Q 020924          140 GQIMDETCWSDKEYC-----RTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQS----KVNTSSLVLIKL  210 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~-----~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~----~~~~~~~~~~~~  210 (319)
                      ..+++|+++..|..+     ....+.|+.||.++|.++++++++.+++++++||++|||+....    ...++..++...
T Consensus       223 ~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~  302 (478)
T 4dqv_A          223 PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL  302 (478)
T ss_dssp             TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred             CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence            567788776443211     01125599999999999999988779999999999999985421    123444444444


Q ss_pred             HhcCcc-c-c---------CCcccccccHHHHHHHHHHhhcc----CC-CCceEEEec-cc--CCHHHHHHHHHHh
Q 020924          211 LKEGYE-S-L---------ENKLRMIVDVRDVAEALLLAYEK----AE-AEGRYICTA-HM--IRARDLVDKLKSL  267 (319)
Q Consensus       211 ~~~~~~-~-~---------~~~~~~~i~v~D~a~~~~~~~~~----~~-~~~~~~~~~-~~--~s~~e~~~~~~~~  267 (319)
                      ...+.. . .         ++..++|+|++|+|++++.++.+    +. .+++||+++ ..  +|+.|+++.+.+.
T Consensus       303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            332221 1 1         14678999999999999999875    32 345898875 55  9999999999986

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=1e-35  Score=252.89  Aligned_cols=235  Identities=19%  Similarity=0.209  Sum_probs=190.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      ||+|||||||||||++++++|+++|++|++++|+.....          ..+++++.+|++|.+.+.++++++|+|||+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------EAHEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------CTTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------CCCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            468999999999999999999999999999999865311          1367889999999999999999999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +...    ...+...+++|+.++.++++++++.++++|||+||..+++..+   ...+++|+++..|      .+.|+.+
T Consensus        72 ~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~---~~~~~~E~~~~~~------~~~Y~~s  138 (267)
T 3ay3_A           72 GVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYP---RTTRIDTEVPRRP------DSLYGLS  138 (267)
T ss_dssp             SCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSB---TTSCBCTTSCCCC------CSHHHHH
T ss_pred             cCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCC---CCCCCCCCCCCCC------CChHHHH
Confidence            8752    2334788999999999999999999999999999987665433   3467888886654      6789999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      |.++|.+++.++++++++++++||+.+|+...                     .++..++|+|++|+|++++.+++++..
T Consensus       139 K~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~---------------------~~~~~~~~~~~~dva~~~~~~~~~~~~  197 (267)
T 3ay3_A          139 KCFGEDLASLYYHKFDIETLNIRIGSCFPKPK---------------------DARMMATWLSVDDFMRLMKRAFVAPKL  197 (267)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC---------------------SHHHHHHBCCHHHHHHHHHHHHHSSCC
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeceeecCCCC---------------------CCCeeeccccHHHHHHHHHHHHhCCCC
Confidence            99999999998877899999999999984311                     112356799999999999999987755


Q ss_pred             C-ceEEEecccCCHHHHHHHHHHhCCCCCCCCCCCCCCCceeechHHHHHhCCccc-cHHHHHHHHHH
Q 020924          245 E-GRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLTSEKLQKLGWSYR-SLEETLVDSVE  310 (319)
Q Consensus       245 ~-~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~  310 (319)
                      . ++|++.+.                           ....+.|..+++.|||+|+ +++++++++.+
T Consensus       198 ~~~~~~~~~~---------------------------~~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~  238 (267)
T 3ay3_A          198 GCTVVYGASA---------------------------NTESWWDNDKSAFLGWVPQDSSEIWREEIEQ  238 (267)
T ss_dssp             CEEEEEECCS---------------------------CSSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred             CceeEecCCC---------------------------ccccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence            3 35655321                           1224467777733999999 99999988765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=3.4e-35  Score=252.22  Aligned_cols=251  Identities=19%  Similarity=0.176  Sum_probs=193.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      |+|||||||||||++++++|+++  |++|++++|+..+..  .+.     ..+++++.+|++|.+++.++++++|+|||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   73 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS--TLA-----DQGVEVRHGDYNQPESLQKAFAGVSKLLFI   73 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH--HHH-----HTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh--HHh-----hcCCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence            47999999999999999999998  999999999865422  221     146889999999999999999999999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+.. .       ..  ++|+.++.+++++|++.++++|||+||.+++ ..                       ..+|+.
T Consensus        74 a~~~-~-------~~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~-----------------------~~~y~~  119 (287)
T 2jl1_A           74 SGPH-Y-------DN--TLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ES-----------------------IIPLAH  119 (287)
T ss_dssp             CCCC-S-------CH--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGG-GC-----------------------CSTHHH
T ss_pred             CCCC-c-------Cc--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CC-----------------------CCchHH
Confidence            9852 1       11  6799999999999999999999999997653 11                       124999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHH-hcCccc-cCCcccccccHHHHHHHHHHhhcc
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL-KEGYES-LENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      +|..+|.+++.    ++++++++||+.++|+...   ..    +.+.. .+.... .+++.++|+|++|+|++++.++++
T Consensus       120 ~K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  188 (287)
T 2jl1_A          120 VHLATEYAIRT----TNIPYTFLRNALYTDFFVN---EG----LRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTE  188 (287)
T ss_dssp             HHHHHHHHHHH----TTCCEEEEEECCBHHHHSS---GG----GHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHH----cCCCeEEEECCEeccccch---hh----HHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcC
Confidence            99999998864    5899999999998876411   12    22222 233222 466889999999999999999987


Q ss_pred             CCCC-ceEEEec-ccCCHHHHHHHHHHhCCCCCCCCC-CC-----------CCC----------------CceeechHHH
Q 020924          242 AEAE-GRYICTA-HMIRARDLVDKLKSLYPNYNYPKS-FT-----------EKE----------------DEVMLTSEKL  291 (319)
Q Consensus       242 ~~~~-~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~-~~-----------~~~----------------~~~~~d~~k~  291 (319)
                      +... ++|++++ ..+|+.|+++.+.+.+|. +.+.. .+           ...                .....|++|+
T Consensus       189 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (287)
T 2jl1_A          189 EGHENKTYNLVSNQPWTFDELAQILSEVSGK-KVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDL  267 (287)
T ss_dssp             SSCTTEEEEECCSSCBCHHHHHHHHHHHHSS-CCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHH
T ss_pred             CCCCCcEEEecCCCcCCHHHHHHHHHHHHCC-cceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHH
Confidence            6544 4788775 699999999999999984 21111 00           000                1245688999


Q ss_pred             HH-hCCccccHHHHHHHHHH
Q 020924          292 QK-LGWSYRSLEETLVDSVE  310 (319)
Q Consensus       292 ~~-lg~~~~~~~~~l~~~~~  310 (319)
                      ++ || .+++++++++++++
T Consensus       268 ~~~lG-~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          268 QKLIG-SLTPLKETVKQALK  286 (287)
T ss_dssp             HHHHS-SCCCHHHHHHHHHT
T ss_pred             HHHhC-CCCCHHHHHHHHhc
Confidence            98 99 55699999999875

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=4.9e-35  Score=248.55  Aligned_cols=214  Identities=19%  Similarity=0.210  Sum_probs=179.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |+||+||||||||+||++++++|+++|++|++++|+.....          ..+++++.+|++|.+++.++++++|+|||
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   70 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVH   70 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            44679999999999999999999999999999999876421          35789999999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      |||...    .+++...+++|+.++.++++++++.+.++|||+||..+++..+   ...+++|+.+..+      .+.|+
T Consensus        71 ~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~---~~~~~~e~~~~~~------~~~Y~  137 (267)
T 3rft_A           71 LGGISV----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYP---QTERLGPDVPARP------DGLYG  137 (267)
T ss_dssp             CCSCCS----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSB---TTSCBCTTSCCCC------CSHHH
T ss_pred             CCCCcC----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCC---CCCCCCCCCCCCC------CChHH
Confidence            999843    2455789999999999999999999999999999988775443   3567888876655      68899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .||.++|.+++.++++++++++++||+.++|+...                     +...++|++++|+++++..+++.+
T Consensus       138 ~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~---------------------~~~~~~~~~~~d~a~~~~~~~~~~  196 (267)
T 3rft_A          138 VSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN---------------------YRMLSTWFSHDDFVSLIEAVFRAP  196 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS---------------------TTHHHHBCCHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC---------------------CCceeeEEcHHHHHHHHHHHHhCC
Confidence            99999999999999888999999999999987432                     124567899999999999999987


Q ss_pred             CCCc-eE-EEecccCCHHHH
Q 020924          243 EAEG-RY-ICTAHMIRARDL  260 (319)
Q Consensus       243 ~~~~-~~-~~~~~~~s~~e~  260 (319)
                      ..++ ++ ++++...++.++
T Consensus       197 ~~~~~~~~~~s~~~~~~~~~  216 (267)
T 3rft_A          197 VLGCPVVWGASANDAGWWDN  216 (267)
T ss_dssp             CCCSCEEEECCCCTTCCBCC
T ss_pred             CCCceEEEEeCCCCCCcccC
Confidence            7654 44 556666555444

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.1e-34  Score=248.95  Aligned_cols=252  Identities=18%  Similarity=0.142  Sum_probs=188.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +|||||||||||++++++|+++  |++|++++|++.+..  .+..     .+++++.+|++|.+++.++++++|+|||+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~-----~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ--ALAA-----QGITVRQADYGDEAALTSALQGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH--HHHH-----TTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh--hhhc-----CCCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            5899999999999999999998  999999999866422  1211     468899999999999999999999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +..       +     ..|+.++.+++++|++.++++||++||.+++ ..                       ..+|+.+
T Consensus        74 ~~~-------~-----~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~-----------------------~~~y~~s  117 (286)
T 2zcu_A           74 SSE-------V-----GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD-TS-----------------------PLGLADE  117 (286)
T ss_dssp             --------------------CHHHHHHHHHHHHTCCEEEEEEETTTT-TC-----------------------CSTTHHH
T ss_pred             CCC-------c-----hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CC-----------------------cchhHHH
Confidence            852       1     1478899999999999999999999996653 11                       1249999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHHhhccC
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      |..+|.++++    .+++++++||+.++++..        .++.+...+....  .+++.++|+|++|+|++++.++.++
T Consensus       118 K~~~e~~~~~----~~~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  185 (286)
T 2zcu_A          118 HIETEKMLAD----SGIVYTLLRNGWYSENYL--------ASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA  185 (286)
T ss_dssp             HHHHHHHHHH----HCSEEEEEEECCBHHHHH--------TTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHH----cCCCeEEEeChHHhhhhH--------HHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCC
Confidence            9999998865    489999999987766431        1122333333322  4568899999999999999999876


Q ss_pred             CC-CceEEEec-ccCCHHHHHHHHHHhCCCC----CCCCCC-------CCCC----------------CceeechHHHHH
Q 020924          243 EA-EGRYICTA-HMIRARDLVDKLKSLYPNY----NYPKSF-------TEKE----------------DEVMLTSEKLQK  293 (319)
Q Consensus       243 ~~-~~~~~~~~-~~~s~~e~~~~~~~~~g~~----~~~~~~-------~~~~----------------~~~~~d~~k~~~  293 (319)
                      .. +++|++++ ..+|+.|+++.+.+.+|..    +++...       ....                .....|++|+++
T Consensus       186 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (286)
T 2zcu_A          186 GHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSK  265 (286)
T ss_dssp             SCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHH
T ss_pred             CCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHH
Confidence            44 44888876 6999999999999998832    111110       0000                124568899998


Q ss_pred             -hCCccccHHHHHHHHHHHHH
Q 020924          294 -LGWSYRSLEETLVDSVESYK  313 (319)
Q Consensus       294 -lg~~~~~~~~~l~~~~~~~~  313 (319)
                       |||.+++++++++++++||.
T Consensus       266 ~lg~~~~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          266 LIGHPTTTLAESVSHLFNVNN  286 (286)
T ss_dssp             HHTSCCCCHHHHHHGGGC---
T ss_pred             HhCcCCCCHHHHHHHHHhhcC
Confidence             99877799999999998873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=1.1e-34  Score=239.26  Aligned_cols=208  Identities=17%  Similarity=0.198  Sum_probs=170.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC-hhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD-YDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~vi~~a   84 (319)
                      |+||||||||+||++++++|+++|++|++++|+......         ..+++++.+|++| .+++.++++++|+|||+|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a   71 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVS   71 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence            479999999999999999999999999999998653211         1578999999999 999999999999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      |...        ...+++|+.++.+++++|++.++++||++||.+++.+       .+..| .      +..+.+.|+.+
T Consensus        72 g~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~e-~------~~~~~~~Y~~s  129 (219)
T 3dqp_A           72 GSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP-------EKWIG-A------GFDALKDYYIA  129 (219)
T ss_dssp             CCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG-------GGCCS-H------HHHHTHHHHHH
T ss_pred             cCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC-------Ccccc-c------ccccccHHHHH
Confidence            8753        2478899999999999999999999999999765432       22333 1      22346789999


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      |.++|.+++   +..+++++++||+.+||+.....                ...++..++|++++|+|++++.++.++..
T Consensus       130 K~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~----------------~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  190 (219)
T 3dqp_A          130 KHFADLYLT---KETNLDYTIIQPGALTEEEATGL----------------IDINDEVSASNTIGDVADTIKELVMTDHS  190 (219)
T ss_dssp             HHHHHHHHH---HSCCCEEEEEEECSEECSCCCSE----------------EEESSSCCCCEEHHHHHHHHHHHHTCGGG
T ss_pred             HHHHHHHHH---hccCCcEEEEeCceEecCCCCCc----------------cccCCCcCCcccHHHHHHHHHHHHhCccc
Confidence            999999987   44699999999999999864322                11246788999999999999999998765


Q ss_pred             Cc-eEEEecccCCHHHHHHH
Q 020924          245 EG-RYICTAHMIRARDLVDK  263 (319)
Q Consensus       245 ~~-~~~~~~~~~s~~e~~~~  263 (319)
                      .+ +|++++...+++|+.+.
T Consensus       191 ~g~~~~i~~g~~~~~e~~~~  210 (219)
T 3dqp_A          191 IGKVISMHNGKTAIKEALES  210 (219)
T ss_dssp             TTEEEEEEECSEEHHHHHHT
T ss_pred             cCcEEEeCCCCccHHHHHHH
Confidence            44 78887777999998764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=3.5e-34  Score=238.92  Aligned_cols=216  Identities=19%  Similarity=0.214  Sum_probs=169.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCe-EEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENL-KLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      .+++|+||||||||+||++++++|+++|++|++++|+....  ..+..     .++ +++.+|++  +.+.+++.++|+|
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~--~~~~~-----~~~~~~~~~Dl~--~~~~~~~~~~D~v   88 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG--PELRE-----RGASDIVVANLE--EDFSHAFASIDAV   88 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHH-----TTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH--HHHHh-----CCCceEEEcccH--HHHHHHHcCCCEE
Confidence            36789999999999999999999999999999999987642  22221     368 99999999  7788888999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+||....    +.+...+++|+.++.+++++|++.++++||++||.....+           |..+       .+.+.
T Consensus        89 i~~ag~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-----------~~~~-------~~~~~  146 (236)
T 3e8x_A           89 VFAAGSGPH----TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-----------DQGP-------MNMRH  146 (236)
T ss_dssp             EECCCCCTT----SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-----------GGSC-------GGGHH
T ss_pred             EECCCCCCC----CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-----------CCCh-------hhhhh
Confidence            999997543    3347899999999999999999999999999999443221           1111       12577


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhc
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      |+.+|.++|.+++    ..+++++++||+.++|+........             ...++..+++++++|+|++++.+++
T Consensus       147 Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-------------~~~~~~~~~~i~~~Dva~~~~~~~~  209 (236)
T 3e8x_A          147 YLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV-------------SPHFSEITRSITRHDVAKVIAELVD  209 (236)
T ss_dssp             HHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE-------------ESSCSCCCCCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe-------------ccCCCcccCcEeHHHHHHHHHHHhc
Confidence            9999999999886    4699999999999999864322100             1123356899999999999999999


Q ss_pred             cCCCCc-eEEEecccCCHHHHHHHHH
Q 020924          241 KAEAEG-RYICTAHMIRARDLVDKLK  265 (319)
Q Consensus       241 ~~~~~~-~~~~~~~~~s~~e~~~~~~  265 (319)
                      ++...+ +|++++...++.|+++.+.
T Consensus       210 ~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          210 QQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             CGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             CccccCCeEEEeCCCcCHHHHHHHhc
Confidence            875544 7888766899999998765

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=1.5e-33  Score=250.54  Aligned_cols=209  Identities=18%  Similarity=0.149  Sum_probs=178.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |+|||||||||||++++++|+++|+ +|++++|+                          +|.+++.++++++|+|||+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~~~d~Vih~a   54 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALLKADFIVHLA   54 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHHHCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhccCCEEEECC
Confidence            5799999999999999999999998 77765543                          57788888899999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      +....   .++ ...+++|+.++.+++++|++.+++ +|||+||.+++.                         .++|+.
T Consensus        55 ~~~~~---~~~-~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-------------------------~~~Y~~  105 (369)
T 3st7_A           55 GVNRP---EHD-KEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-------------------------DNPYGE  105 (369)
T ss_dssp             CSBCT---TCS-TTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-------------------------CSHHHH
T ss_pred             cCCCC---CCH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-------------------------CCCchH
Confidence            97654   233 678999999999999999999987 999999976543                         244999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHHhhc
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      +|.++|.++++++++++++++++||+++||+...+.. ..+..++.....+.+..  .+++.++|+|++|+|++++.+++
T Consensus       106 sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  185 (369)
T 3st7_A          106 SKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIE  185 (369)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHh
Confidence            9999999999999888999999999999999776543 45666777777777666  35588999999999999999999


Q ss_pred             cCCC--CceEEEe-cccCCHHHHHHHHHHhCC
Q 020924          241 KAEA--EGRYICT-AHMIRARDLVDKLKSLYP  269 (319)
Q Consensus       241 ~~~~--~~~~~~~-~~~~s~~e~~~~~~~~~g  269 (319)
                      .+..  +++|+++ +..+|+.|+++.+.+.+|
T Consensus       186 ~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          186 GTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             TCCCEETTEECCSCCEEEEHHHHHHHHHHHHH
T ss_pred             CCcccCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence            8876  5688776 589999999999999987

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=2.1e-32  Score=226.23  Aligned_cols=217  Identities=12%  Similarity=0.063  Sum_probs=162.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|||||||||||++++++|+++|++|++++|+..+.  ..   +  ...+++++.+|++|.+.  +++.++|+|||+||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~---~--~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   71 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA--AD---R--LGATVATLVKEPLVLTE--ADLDSVDAVVDALS   71 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HH---H--TCTTSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc--cc---c--cCCCceEEecccccccH--hhcccCCEEEECCc
Confidence            4799999999999999999999999999999986532  11   1  12578999999999887  78889999999998


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ....       ....++|+.++.+++++|++.+ ++||++||.++++..+.. ...+.+|....      .+.+.|+.+|
T Consensus        72 ~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~-~~~~~~~~~~~------~~~~~y~~sK  136 (224)
T 3h2s_A           72 VPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGAD-HPMILDFPESA------ASQPWYDGAL  136 (224)
T ss_dssp             CCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCS-SCGGGGCCGGG------GGSTTHHHHH
T ss_pred             cCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCC-ccccccCCCCC------ccchhhHHHH
Confidence            7521       1346789999999999999999 899999998777765421 11233333322      2367799999


Q ss_pred             HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCCC
Q 020924          166 TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE  245 (319)
Q Consensus       166 ~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  245 (319)
                      ...|. +..+.++.+++++++||+.+||++....  ..       ........++..+++++++|+|++++.+++++...
T Consensus       137 ~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~  206 (224)
T 3h2s_A          137 YQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS--YV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAI  206 (224)
T ss_dssp             HHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC--EE-------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCT
T ss_pred             HHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC--ce-------ecccccccCCCCCceEeHHHHHHHHHHHhcCcccc
Confidence            99994 4556556799999999999999853221  10       01112224456789999999999999999988764


Q ss_pred             c-eEEEec-ccCC
Q 020924          246 G-RYICTA-HMIR  256 (319)
Q Consensus       246 ~-~~~~~~-~~~s  256 (319)
                      + +|++++ ...+
T Consensus       207 g~~~~~~~~~~~~  219 (224)
T 3h2s_A          207 RDRIVVRDADLEH  219 (224)
T ss_dssp             TSEEEEEECC---
T ss_pred             CCEEEEecCcchh
Confidence            4 787776 4443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=8.5e-33  Score=243.51  Aligned_cols=270  Identities=14%  Similarity=0.133  Sum_probs=190.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh--hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--Ccc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD--EKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   78 (319)
                      |.+|+|||||||||||++++++|+++|++|++++|+...  .....+..+.  ..+++++.+|++|.+++.++++  ++|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence            456799999999999999999999999999999998732  2222222322  2579999999999999999999  999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccC
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      +|||+|+.               .|+.++.+++++|++.+ +++||+ |+   ++        ...+|..+..|      
T Consensus        86 ~Vi~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S~---~g--------~~~~e~~~~~p------  132 (346)
T 3i6i_A           86 IVVSTVGG---------------ESILDQIALVKAMKAVGTIKRFLP-SE---FG--------HDVNRADPVEP------  132 (346)
T ss_dssp             EEEECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-SC---CS--------SCTTTCCCCTT------
T ss_pred             EEEECCch---------------hhHHHHHHHHHHHHHcCCceEEee-cc---cC--------CCCCccCcCCC------
Confidence            99999975               27788999999999999 999986 43   21        11344444333      


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEA  234 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~  234 (319)
                      .+.|+.+|..+|.++++    .+++++++||+.++|.......    ........+....   .|+..++|+|++|+|++
T Consensus       133 ~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~----~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~  204 (346)
T 3i6i_A          133 GLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNI----HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKF  204 (346)
T ss_dssp             HHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCcccc----ccccccCCCceEEEccCCCceEEecCHHHHHHH
Confidence            57799999999998876    5899999999999996532221    1100111222222   35578999999999999


Q ss_pred             HHHhhccCCC-CceEEEe--cccCCHHHHHHHHHHhCCCCCCCCCCCC----------C-CC----------------ce
Q 020924          235 LLLAYEKAEA-EGRYICT--AHMIRARDLVDKLKSLYPNYNYPKSFTE----------K-ED----------------EV  284 (319)
Q Consensus       235 ~~~~~~~~~~-~~~~~~~--~~~~s~~e~~~~~~~~~g~~~~~~~~~~----------~-~~----------------~~  284 (319)
                      ++.++..+.. ++.|++.  +..+|+.|+++.+.+.+|. +++.....          . .+                ..
T Consensus       205 ~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~  283 (346)
T 3i6i_A          205 TMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR-TLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQV  283 (346)
T ss_dssp             HHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS-CCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTT
T ss_pred             HHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC-CCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCc
Confidence            9999998765 4466654  5899999999999999983 22211100          0 00                01


Q ss_pred             eech-----HHHHH--hCCccccHHHHHHHHHHHHHHcC
Q 020924          285 MLTS-----EKLQK--LGWSYRSLEETLVDSVESYKKVG  316 (319)
Q Consensus       285 ~~d~-----~k~~~--lg~~~~~~~~~l~~~~~~~~~~~  316 (319)
                      .++.     .++++  .++++++++|.++++++|++++.
T Consensus       284 ~~~~~~~~~~~~~~~~p~~~~t~~~e~l~~~~~~~~~~~  322 (346)
T 3i6i_A          284 NFSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVKMEEKQ  322 (346)
T ss_dssp             SSCCCSTTEEEHHHHSTTCCCCCHHHHHHHHHCC-----
T ss_pred             ccccCCCCcccHHHhCCCCCcCcHHHHHHHHHHHhhccc
Confidence            1222     12444  47888899999999999988753

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=4.9e-32  Score=232.74  Aligned_cols=249  Identities=16%  Similarity=0.165  Sum_probs=182.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |+||||||||+||++++++|++. |++|++++|++.+...     +  ...+++++.+|++|.+++.++++++|+|||+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----~--~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a   73 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----D--WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIP   73 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----G--GBTTBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----h--hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            46999999999999999999988 9999999998764211     1  13579999999999999999999999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      +....          ...|+.++.+++++|++.++++|||+||...   ..                      ..+|..+
T Consensus        74 ~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~----------------------~~~~~~~  118 (289)
T 3e48_A           74 SIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QH----------------------NNPFHMS  118 (289)
T ss_dssp             CCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---ST----------------------TCCSTTH
T ss_pred             CCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CC----------------------CCCCccc
Confidence            75322          2458999999999999999999999999431   10                      0112222


Q ss_pred             H--HHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHHHHHHHHHHhhc
Q 020924          165 K--TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       165 K--~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                      +  ..+|..+.    +.+++++++||+.++|+.        ..++.....+....  .|+..++|++++|+|++++.++.
T Consensus       119 ~~~~~~e~~~~----~~g~~~~ilrp~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~  186 (289)
T 3e48_A          119 PYFGYASRLLS----TSGIDYTYVRMAMYMDPL--------KPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIK  186 (289)
T ss_dssp             HHHHHHHHHHH----HHCCEEEEEEECEESTTH--------HHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHH----HcCCCEEEEecccccccc--------HHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHc
Confidence            2  23443333    358999999999999873        22333433333333  56688999999999999999998


Q ss_pred             cCCC-CceEEEecccCCHHHHHHHHHHhCCCCCCCCCCC----------C-CC--------------CceeechHHHHH-
Q 020924          241 KAEA-EGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFT----------E-KE--------------DEVMLTSEKLQK-  293 (319)
Q Consensus       241 ~~~~-~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~----------~-~~--------------~~~~~d~~k~~~-  293 (319)
                      ++.. +.+|++++..+|+.|+++.+.+.+|. ++.....          . ..              .....+.+.+++ 
T Consensus       187 ~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  265 (289)
T 3e48_A          187 NPDTWGKRYLLSGYSYDMKELAAILSEASGT-EIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQL  265 (289)
T ss_dssp             CGGGTTCEEEECCEEEEHHHHHHHHHHHHTS-CCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred             CCCcCCceEEeCCCcCCHHHHHHHHHHHHCC-ceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHH
Confidence            8765 45887779999999999999999984 1111000          0 00              113345566777 


Q ss_pred             hCCccccHHHHHHHHH
Q 020924          294 LGWSYRSLEETLVDSV  309 (319)
Q Consensus       294 lg~~~~~~~~~l~~~~  309 (319)
                      +|++|++|++.+++..
T Consensus       266 ~G~~p~~~~~~~~~~~  281 (289)
T 3e48_A          266 VNDQPQTLQSFLQENI  281 (289)
T ss_dssp             HSSCCCCHHHHHHC--
T ss_pred             hCCCCCCHHHHHHHHH
Confidence            8999999998776643

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=3.7e-32  Score=228.82  Aligned_cols=232  Identities=20%  Similarity=0.170  Sum_probs=172.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      ++++|+||||||||+||++++++|+++  |++|++++|++.+.     ..+   ..+++++.+|++|.+++.++++++|+
T Consensus         1 s~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~-----~~~---~~~~~~~~~D~~d~~~~~~~~~~~d~   72 (253)
T 1xq6_A            1 SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-----EKI---GGEADVFIGDITDADSINPAFQGIDA   72 (253)
T ss_dssp             CCSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH-----HHT---TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch-----hhc---CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence            356789999999999999999999999  89999999975421     111   24678999999999999999999999


Q ss_pred             EEEecccCCCCC-------CCCc------cchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           80 VFHIACPAPSTT-------VPNP------QMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        80 vi~~a~~~~~~~-------~~~~------~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      |||+|+......       ..++      +...+++|+.++.++++++++.++++||++||.+++.+.            
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~------------  140 (253)
T 1xq6_A           73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD------------  140 (253)
T ss_dssp             EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT------------
T ss_pred             EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC------------
Confidence            999998653210       0111      124679999999999999999999999999997643211            


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                      .+..+    ...+.|+.+|.++|.+++.    .+++++++||+.+||+..... ...        .+..........+++
T Consensus       141 ~~~~~----~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~-~~~--------~~~~~~~~~~~~~~~  203 (253)
T 1xq6_A          141 HPLNK----LGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVR-ELL--------VGKDDELLQTDTKTV  203 (253)
T ss_dssp             CGGGG----GGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSS-CEE--------EESTTGGGGSSCCEE
T ss_pred             Ccccc----ccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchh-hhh--------ccCCcCCcCCCCcEE
Confidence            11111    0023488899999988764    589999999999999864321 110        111111111245799


Q ss_pred             cHHHHHHHHHHhhccCCCCc-eEEEec----ccCCHHHHHHHHHHhCCC
Q 020924          227 DVRDVAEALLLAYEKAEAEG-RYICTA----HMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~~~~-~~~~~~----~~~s~~e~~~~~~~~~g~  270 (319)
                      +++|+|++++.+++++...+ +|++++    ..+|+.|+++.+.+.+|+
T Consensus       204 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          204 PRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             EHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             cHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            99999999999998765534 787765    358999999999998874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=6.7e-32  Score=222.69  Aligned_cols=215  Identities=14%  Similarity=0.171  Sum_probs=145.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|||||||||||++++++|+++|++|++++|++.+.     ..+.   ++++++.+|++|.+.  +++.++|+|||+||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~---~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   70 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI-----TQTH---KDINILQKDIFDLTL--SDLSDQNVVVDAYG   70 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH-----HHHC---SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh-----hhcc---CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence            4799999999999999999999999999999986532     1111   578999999999887  78889999999998


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhH
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK  165 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  165 (319)
                      ...         ...+.|+.++.+++++|++.+++++|++||..++++.+.   ..+..|+.+..|      .+.|+.+|
T Consensus        71 ~~~---------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~~~~~~~------~~~y~~~k  132 (221)
T 3ew7_A           71 ISP---------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED---GNTLLESKGLRE------APYYPTAR  132 (221)
T ss_dssp             SST---------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC----------------------------CCCSCCHH
T ss_pred             CCc---------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCC---CccccccCCCCC------HHHHHHHH
Confidence            732         135679999999999999998999999999888876642   334555554433      56799999


Q ss_pred             HHHHHHHHHhhh-hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC
Q 020924          166 TEAESEALEFGK-KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       166 ~~~e~~~~~~~~-~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ...|.+ ..+.+ ..+++++++||+.+||+.....     .+   ...+..........++++++|+|++++.+++++..
T Consensus       133 ~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~-----~~---~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~  203 (221)
T 3ew7_A          133 AQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG-----DY---QIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNH  203 (221)
T ss_dssp             HHHHHH-HHHHTTTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSC
T ss_pred             HHHHHH-HHHHhhccCccEEEEeCcceecCCCccC-----ce---EeccccceecCCCCceEeHHHHHHHHHHHHhCccc
Confidence            999986 33333 5799999999999999843211     00   01112222222334799999999999999998876


Q ss_pred             Cc-eEEEec-ccCCH
Q 020924          245 EG-RYICTA-HMIRA  257 (319)
Q Consensus       245 ~~-~~~~~~-~~~s~  257 (319)
                      .+ +|++++ .+.+.
T Consensus       204 ~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          204 LNEHFTVAGKLEHHH  218 (221)
T ss_dssp             TTSEEECCC------
T ss_pred             cCCEEEECCCCcccc
Confidence            44 788776 44443

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.98  E-value=1.6e-31  Score=228.70  Aligned_cols=243  Identities=15%  Similarity=0.074  Sum_probs=172.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+..... .....   .+.+++++.+|++|.+++.++++     
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD-DLVAA---YPDRAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence            8888999999999999999999999999999999999865422 11121   23578999999999999988776     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKA----CLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~----~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        ++|+||||||......    ..+.+...+++|+.++.+++++    +++.+.++||++||..++.+.+          
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  146 (281)
T 3m1a_A           77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFA----------  146 (281)
T ss_dssp             HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT----------
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCC----------
Confidence              6899999999654321    1223466889999995555554    4566778999999987765432          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC----CccHHHHHHHHhcCcccc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV----NTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~  218 (319)
                                 +.++|+.||.+.|.+++.++.+   +|+++++++||.++++......    .....+............
T Consensus       147 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (281)
T 3m1a_A          147 -----------GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQ  215 (281)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHH
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHh
Confidence                       2567999999999999988776   6999999999999887643221    111111122111111222


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCCCceEEEec-ccCCHHHHHHHHHHhC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTA-HMIRARDLVDKLKSLY  268 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~  268 (319)
                      +...+++++++|+|++++.+++.+..+++|++++ ....+.+.+..+.+.+
T Consensus       216 ~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          216 GSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             C-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             hccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence            2355678899999999999999887777887764 5556666666666544

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=2.6e-30  Score=220.74  Aligned_cols=242  Identities=15%  Similarity=0.157  Sum_probs=179.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+.... .....++. ...++.++.+|++|.+++.++++     
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG-QKVCNNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHH-HHHHHHhC-CCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999875432 11222221 12378999999999999988876     


Q ss_pred             --CcceEEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        ++|+||||||.....      ...+.+...+++|+.++.++++++.+.    +.++||++||..++.+.+        
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  161 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE--------  161 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC--------
Confidence              689999999965321      111234668999999999999998764    567999999987665432        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                  .+...|+.+|.+.|.+++.++.+   +|++++++||+.++|+....................    +.
T Consensus       162 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~  225 (278)
T 2bgk_A          162 ------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA----AN  225 (278)
T ss_dssp             ------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT----CS
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc----cc
Confidence                        01466999999999999988765   589999999999999875443222223333332221    12


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec-ccCCHHHHHHHHHHhC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA-HMIRARDLVDKLKSLY  268 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s~~e~~~~~~~~~  268 (319)
                      ..+.+++++|+|+++++++....  ..| .|+++| ...++.|+++.+.+.+
T Consensus       226 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          226 LKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             SCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             cccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            34568999999999999997542  234 677765 7899999999887643

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=3.1e-32  Score=223.82  Aligned_cols=206  Identities=19%  Similarity=0.159  Sum_probs=157.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |++++|+|+||||||+||++++++|+++|+  +|++++|++..           ..++++++.+|++|.+++.+++  +|
T Consensus         1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------~~~~~~~~~~D~~~~~~~~~~~--~d   67 (215)
T 2a35_A            1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRLDNPVGPLAELLPQLDGS--ID   67 (215)
T ss_dssp             ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTEECCBSCHHHHGGGCCSC--CS
T ss_pred             CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------cCCCceEEeccccCHHHHHHhh--hc
Confidence            665568999999999999999999999998  99999998763           1257888999999988888777  99


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      +|||+|+.....  ...+...+++|+.++.++++++++.++++||++||..++. .                      +.
T Consensus        68 ~vi~~a~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~-~----------------------~~  122 (215)
T 2a35_A           68 TAFCCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-K----------------------SS  122 (215)
T ss_dssp             EEEECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-T----------------------CS
T ss_pred             EEEECeeecccc--CCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC-C----------------------Cc
Confidence            999999865321  1234778999999999999999999999999999966543 1                      13


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCce-EEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLD-VVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLL  237 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~-~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  237 (319)
                      ++|+.+|.++|.+++.    .+++ ++++||+.+||+.....  ..    .... +.....++..++++|++|+|++++.
T Consensus       123 ~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~--~~----~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~  191 (215)
T 2a35_A          123 IFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR--LA----EILA-APIARILPGKYHGIEACDLARALWR  191 (215)
T ss_dssp             SHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE--GG----GGTT-CCCC----CHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch--HH----HHHH-HhhhhccCCCcCcEeHHHHHHHHHH
Confidence            5699999999998876    4899 99999999999875421  11    1111 1111122336789999999999999


Q ss_pred             hhccCCCCceEEEec-ccCC
Q 020924          238 AYEKAEAEGRYICTA-HMIR  256 (319)
Q Consensus       238 ~~~~~~~~~~~~~~~-~~~s  256 (319)
                      +++++. ++.|++++ +..+
T Consensus       192 ~~~~~~-~~~~~i~~~~~~~  210 (215)
T 2a35_A          192 LALEEG-KGVRFVESDELRK  210 (215)
T ss_dssp             HHTCCC-SEEEEEEHHHHHH
T ss_pred             HHhcCC-CCceEEcHHHHHH
Confidence            999875 67888775 4433

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=5e-31  Score=220.61  Aligned_cols=209  Identities=17%  Similarity=0.122  Sum_probs=160.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++|+|+||||||+||++++++|+++|+  +|++++|++.......       ..+++++.+|++|.+++.++++++|+|
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~d~v   88 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG   88 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhcCCCEE
Confidence            5678999999999999999999999999  9999999876421110       135788999999999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |||||.....   ..+...+++|+.++.++++++++.++++||++||.+++...                       .++
T Consensus        89 i~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----------------------~~~  142 (242)
T 2bka_A           89 FCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-----------------------NFL  142 (242)
T ss_dssp             EECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-----------------------SSH
T ss_pred             EECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC-----------------------cch
Confidence            9999864321   12367889999999999999999999999999997654311                       345


Q ss_pred             HHhhHHHHHHHHHHhhhhCCc-eEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhh
Q 020924          161 YCLSKTEAESEALEFGKKTGL-DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~-~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      |+.+|.+.|.+++.+    ++ +++++||+.++|+.....  ....+........+...+  ...+++++|+|++++.++
T Consensus       143 Y~~sK~~~e~~~~~~----~~~~~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~~~  214 (242)
T 2bka_A          143 YLQVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSWA--SGHSVPVVTVVRAMLNNV  214 (242)
T ss_dssp             HHHHHHHHHHHHHTT----CCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTGG--GGTEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc----CCCCeEEEcCceecCCCCCCc--HHHHHHHHhhcccCcccc--CCcccCHHHHHHHHHHHH
Confidence            999999999988764    67 699999999999864321  112222222222221111  245899999999999999


Q ss_pred             ccCCCCceEEEec
Q 020924          240 EKAEAEGRYICTA  252 (319)
Q Consensus       240 ~~~~~~~~~~~~~  252 (319)
                      .++...+.|++++
T Consensus       215 ~~~~~~~~~~~~~  227 (242)
T 2bka_A          215 VRPRDKQMELLEN  227 (242)
T ss_dssp             TSCCCSSEEEEEH
T ss_pred             hCccccCeeEeeH
Confidence            9887777777664

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=1.3e-30  Score=229.56  Aligned_cols=226  Identities=15%  Similarity=0.115  Sum_probs=170.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEcc-CCChhhHHHHhcCcce
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD-LLDYDSVKSAIVGCNG   79 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~d~   79 (319)
                      |+|.+|+|+|||||||||++++++|+++|++|++++|+.+......+..    ..+++++.+| ++|.+++.++++++|+
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~----~~~v~~v~~D~l~d~~~l~~~~~~~d~   76 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHL   76 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT----STTEEEEESCCTTCHHHHHHHHTTCSE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh----cCCcEEEECCccCCHHHHHHHHhcCCE
Confidence            7776789999999999999999999999999999999877532222221    2478999999 9999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEecccc-ccccCCCCCCCcccCCCCCCCccccccC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGV-AVGLNPRWPKGQIMDETCWSDKEYCRTT  157 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~  157 (319)
                      |||+++...           .+.|..+ .+++++|++.+ +++|||+||.+ ..++..                     +
T Consensus        77 Vi~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~---------------------~  123 (352)
T 1xgk_A           77 AFINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPW---------------------P  123 (352)
T ss_dssp             EEECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSC---------------------C
T ss_pred             EEEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCC---------------------C
Confidence            999986421           1347776 99999999999 99999999975 222110                     1


Q ss_pred             CchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCcc---c-cCCcccccccH-HHH
Q 020924          158 NNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYE---S-LENKLRMIVDV-RDV  231 (319)
Q Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~~~~~~i~v-~D~  231 (319)
                      .++|+.+|.++|.+++..    +++++++||+ +||++..... ..+.  ......+...   . .+++.++|+|+ +|+
T Consensus       124 ~~~y~~sK~~~E~~~~~~----gi~~~ivrpg-~~g~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dv  196 (352)
T 1xgk_A          124 AVPMWAPKFTVENYVRQL----GLPSTFVYAG-IYNNNFTSLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPWLDAEHDV  196 (352)
T ss_dssp             CCTTTHHHHHHHHHHHTS----SSCEEEEEEC-EEGGGCBSSSCSSCB--EEECTTSCEEEEESSCTTSCEEEECHHHHH
T ss_pred             CccHHHHHHHHHHHHHHc----CCCEEEEecc-eecCCchhccccccc--ccccCCCceEEeeccCCCCceeeEecHHHH
Confidence            345999999999998763    8999999987 6787643221 0100  0001123321   1 35688899999 899


Q ss_pred             HHHHHHhhccCC---CCceEEEecccCCHHHHHHHHHHhCCC
Q 020924          232 AEALLLAYEKAE---AEGRYICTAHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       232 a~~~~~~~~~~~---~~~~~~~~~~~~s~~e~~~~~~~~~g~  270 (319)
                      |++++.+++++.   .+++|+++++.+|+.|+++.+.+.+|.
T Consensus       197 a~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          197 GPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             HHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence            999999998752   356899888889999999999999884

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=4.8e-30  Score=216.30  Aligned_cols=227  Identities=15%  Similarity=0.122  Sum_probs=169.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+||||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.++++++++     
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA-NHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            357789999999999999999999999999999999976432 12223333334578899999999999988876     


Q ss_pred             --CcceEEEecccCCCCCC---CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTTV---PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        ++|+||||||.......   .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+           
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------  154 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI-----------  154 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC-----------
Confidence              78999999997543211   12246788999999999999886    34678999999977654322           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +.+.|+.+|.+.|.+++.++.++   +++++++||+.++++.....  ....+......+.      ...
T Consensus       155 ----------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~------~~~  216 (255)
T 1fmc_A          155 ----------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHT------PIR  216 (255)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTC------SSC
T ss_pred             ----------CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcC------Ccc
Confidence                      15679999999999999887653   89999999999998753321  1233333333332      345


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCCH
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIRA  257 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s~  257 (319)
                      .+++++|+|++++.++.....  .| .|++++ ...|+
T Consensus       217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             cCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            688999999999999976432  34 677765 55553

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=2.5e-30  Score=223.16  Aligned_cols=224  Identities=16%  Similarity=0.064  Sum_probs=172.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +|+||||||||+||++++++|+++| ++|++++|++.+.....+.     ..+++++.+|++|.+++.++++++|+|||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   79 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-----LQGAEVVQGDQDDQVIMELALNGAYATFIV   79 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-----HTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-----HCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence            4789999999999999999999998 9999999987653222222     146899999999999999999999999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      ++....        ...+.|+.++.+++++|++.++++||+.||.. +++.+         +..         +..+|+.
T Consensus        80 a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~-~~~~~---------~~~---------~~~~y~~  132 (299)
T 2wm3_A           80 TNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLEN-IKKLT---------AGR---------LAAAHFD  132 (299)
T ss_dssp             CCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCC-HHHHT---------TTS---------CCCHHHH
T ss_pred             CCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCcc-ccccC---------CCc---------ccCchhh
Confidence            874211        12467899999999999999999999977744 33321         011         1355999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc----cccCCcccccccHHHHHHHHHHhh
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY----ESLENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      +|..+|.++++    .+++++++||+.+||+........      ....+..    ...++..++|+|++|+|+++..++
T Consensus       133 sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (299)
T 2wm3_A          133 GKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLL  202 (299)
T ss_dssp             HHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHH
Confidence            99999998875    389999999999999753211100      0112211    113567889999999999999999


Q ss_pred             ccCC--CCceEEEecccCCHHHHHHHHHHhCCC
Q 020924          240 EKAE--AEGRYICTAHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       240 ~~~~--~~~~~~~~~~~~s~~e~~~~~~~~~g~  270 (319)
                      .++.  .+..|++++..+|+.|+++.+.+.+|.
T Consensus       203 ~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~  235 (299)
T 2wm3_A          203 KMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK  235 (299)
T ss_dssp             HSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred             cChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC
Confidence            8642  244788888889999999999999873

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-29  Score=216.54  Aligned_cols=238  Identities=13%  Similarity=0.142  Sum_probs=160.6

Q ss_pred             CC-CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh---hccCCCeEEEEccCCChhhHHHHhc-
Q 020924            1 MA-LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL---EKASENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      |+ |++|+++||||+|+||++++++|+++|++|++++|+..... ....++   ...+.++.++.+|++|.+++.++++ 
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE-ETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH
Confidence            44 67899999999999999999999999999999999754321 122222   2223468899999999999998876 


Q ss_pred             ------CcceEEEecccCCCCC--------CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccc-cccCCC
Q 020924           76 ------GCNGVFHIACPAPSTT--------VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVA-VGLNPR  136 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~~~--------~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~-~~~~~~  136 (319)
                            ++|+||||||......        ..+.+...+++|+.++.++++++.+.    + ++||++||..+ +.+.+ 
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-  157 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATP-  157 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCT-
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCC-
Confidence                  7899999999654321        12234678999999999999998764    5 79999999765 44322 


Q ss_pred             CCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHH------H
Q 020924          137 WPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLV------L  207 (319)
Q Consensus       137 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~------~  207 (319)
                                          +...|+.||.+.+.+++.++.+   +|+++++++||.++++............      .
T Consensus       158 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  217 (278)
T 1spx_A          158 --------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTM  217 (278)
T ss_dssp             --------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHH
T ss_pred             --------------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHH
Confidence                                1466999999999999887654   5899999999999988643210000000      1


Q ss_pred             HHHHhcCccccCCcccccccHHHHHHHHHHhhccCC---CCc-eEEEec-ccCCHHHHHHHHHHh
Q 020924          208 IKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE---AEG-RYICTA-HMIRARDLVDKLKSL  267 (319)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~~~~-~~~s~~e~~~~~~~~  267 (319)
                      .......      ....+++++|+|+++++++..+.   ..| .++++| ...++.++++.+.++
T Consensus       218 ~~~~~~~------p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~  276 (278)
T 1spx_A          218 ATMKECV------PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL  276 (278)
T ss_dssp             HHHHHHC------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred             HHHHhcC------CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence            2221111      23468999999999999997543   334 567764 789999999988765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=5.4e-29  Score=202.96  Aligned_cols=201  Identities=14%  Similarity=0.144  Sum_probs=152.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+|+|+||||||+||++++++|+++|++|++++|++....     ..  ...+++++.+|++|.+++.++++++|+|||+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   74 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-----SE--GPRPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-----SS--SCCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc-----cc--cCCceEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            3479999999999999999999999999999999865321     00  1357899999999999999999999999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+....   .+    ..++|+.++.++++++++.++++||++||..++...+.    .+             .+.+.|+.
T Consensus        75 a~~~~~---~~----~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~----~~-------------~~~~~y~~  130 (206)
T 1hdo_A           75 LGTRND---LS----PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK----VP-------------PRLQAVTD  130 (206)
T ss_dssp             CCCTTC---CS----CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC----SC-------------GGGHHHHH
T ss_pred             ccCCCC---CC----ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccc----cc-------------ccchhHHH
Confidence            986543   12    23589999999999999999999999999765443211    00             02567999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc-cccccHHHHHHHHHHhhccC
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL-RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +|.++|.+++.    .+++++++||+.+. +..... ....            ..++.. .+|++++|+|++++.+++++
T Consensus       131 ~K~~~e~~~~~----~~i~~~~lrp~~~~-~~~~~~-~~~~------------~~~~~~~~~~i~~~Dva~~~~~~~~~~  192 (206)
T 1hdo_A          131 DHIRMHKVLRE----SGLKYVAVMPPHIG-DQPLTG-AYTV------------TLDGRGPSRVISKHDLGHFMLRCLTTD  192 (206)
T ss_dssp             HHHHHHHHHHH----TCSEEEEECCSEEE-CCCCCS-CCEE------------ESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             HHHHHHHHHHh----CCCCEEEEeCCccc-CCCCCc-ceEe------------cccCCCCCCccCHHHHHHHHHHHhcCc
Confidence            99999998853    58999999999983 322111 1100            011111 58999999999999999987


Q ss_pred             CCCc-eEEEecc
Q 020924          243 EAEG-RYICTAH  253 (319)
Q Consensus       243 ~~~~-~~~~~~~  253 (319)
                      ...+ .|++++.
T Consensus       193 ~~~g~~~~i~~g  204 (206)
T 1hdo_A          193 EYDGHSTYPSHQ  204 (206)
T ss_dssp             TTTTCEEEEECC
T ss_pred             cccccceeeecc
Confidence            6544 7877653

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=6.5e-29  Score=210.01  Aligned_cols=227  Identities=13%  Similarity=0.113  Sum_probs=166.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+|+||||+|+||++++++|+++|++|++++|+.... ....+.+...+.++.++.+|++|.+++.++++     
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMA-TKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            346778999999999999999999999999999999975432 12223333334578999999999999988775     


Q ss_pred             --CcceEEEecccCC-CCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAP-STTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~-~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        ++|+||||||... ....    .+.+...+++|+.++.++++++.+    .+.++||++||.+++.+.+.        
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------  159 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP--------  159 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC--------
Confidence              6899999999654 2111    122366789999999999999875    36679999999776543321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                 .+...|+.+|.+.|.+++.++.+   ++++++++||+.++|+...... ....+......+.      .
T Consensus       160 -----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~------~  221 (260)
T 3awd_A          160 -----------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGT------P  221 (260)
T ss_dssp             -----------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTC------T
T ss_pred             -----------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcC------C
Confidence                       11367999999999999988776   6899999999999998643110 0122233333322      3


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEeccc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAHM  254 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~  254 (319)
                      ...+++++|+|++++.++....  ..| .+++++..
T Consensus       222 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          222 MGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            4568999999999999997532  234 57777643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.97  E-value=1.4e-28  Score=206.23  Aligned_cols=220  Identities=17%  Similarity=0.192  Sum_probs=167.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      ++|++|||||+|+||++++++|+++|++|++++|+.........+++...+.++.++.+|++|.++++++++       .
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999999998865443333334444445678999999999999988776       6


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|++|||||......    ..+.++..+++|+.++.++++++    ++.+.++||++||..++.+.+.            
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  150 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG------------  150 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC------------
Confidence            899999999764321    12234668999999999999999    4456679999999887765431            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....   ..........+.      +.+.+
T Consensus       151 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~~r~  212 (246)
T 3osu_A          151 ---------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQI------PLARF  212 (246)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTC------TTCSC
T ss_pred             ---------ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcC------CCCCC
Confidence                     566999999999999888763   589999999999999875432   233333333332      45678


Q ss_pred             ccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          226 VDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      .+++|+|+++++++.....  .| .++++|.
T Consensus       213 ~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          213 GQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            8999999999999976533  34 5677653

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=1.5e-29  Score=218.67  Aligned_cols=240  Identities=14%  Similarity=0.083  Sum_probs=172.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhcC----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIVG----   76 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----   76 (319)
                      +|++|+|+||||+|+||++++++|+++|++|++++|+..... ....++... +.++.++.+|++|.+++.++++.    
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK-ATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999864321 222222211 45789999999999999887753    


Q ss_pred             ---cceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccC
Q 020924           77 ---CNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        77 ---~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         +|+||||||.....    ...+.+...+++|+.++.++++++.+.     +.++||++||.+++.+.+         
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  172 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---------  172 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC---------
Confidence               59999999965432    112234678999999999999888642     457999999987765432         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +...|+.||.+.+.+++.++.+   +|++++++|||.++++....................      .
T Consensus       173 ------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------p  234 (302)
T 1w6u_A          173 ------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI------P  234 (302)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC------T
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC------C
Confidence                        1566999999999999988776   689999999999998742211100011111222221      3


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCCHHHHHHHHHHhCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIRARDLVDKLKSLYP  269 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s~~e~~~~~~~~~g  269 (319)
                      ...+++++|+|++++.++.....  .| .+++++ ...+++++++.+.+..|
T Consensus       235 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          235 CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            45688999999999999975432  34 677765 67788888777776654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.96  E-value=1.5e-28  Score=206.21  Aligned_cols=222  Identities=16%  Similarity=0.112  Sum_probs=155.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |+|++|+|+||||+|+||++++++|+++|++|++++ |+... .......+...+.++.++.+|++|.+++.++++    
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS-LDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSH-HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            888899999999999999999999999999999994 55443 222223333334578999999999999988776    


Q ss_pred             ---CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         ++|+||||||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||..++++.+.        
T Consensus        80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------  151 (247)
T 2hq1_A           80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG--------  151 (247)
T ss_dssp             HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------
Confidence               689999999975422    12234578899999999998888764    46779999999876664421        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.+|.+.+.+++.++.++   ++++++++|+.+.++....   ...........+      ..
T Consensus       152 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~------~~  209 (247)
T 2hq1_A          152 -------------QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV---LPDKVKEMYLNN------IP  209 (247)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTT------ST
T ss_pred             -------------CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh---cchHHHHHHHhh------CC
Confidence                         4669999999999999887653   8999999999998764321   112222222222      13


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .+.+++++|+|++++.++..+.  ..| .|++++.
T Consensus       210 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          210 LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            4568999999999999987542  234 6777654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=5.7e-29  Score=208.36  Aligned_cols=218  Identities=20%  Similarity=0.170  Sum_probs=162.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Ccc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCN   78 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d   78 (319)
                      +|++|+||||||+|+||++++++|+++|++|++++|+..... ....+    ..+++++.+|++|.+++.++++   .+|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV-SLAKE----CPGIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHH----STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHh----ccCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            477899999999999999999999999999999999754321 11111    1357788999999999999887   479


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      +|||+||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+              
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------  144 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP--------------  144 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred             EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC--------------
Confidence            9999999654321    11234668899999999999988764    4 57999999987655332              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                             +...|+.||.+.|.+++.++.+   .+++++++||+.++|+...... ....++.....+.      ..++|+
T Consensus       145 -------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~~~~~  210 (244)
T 1cyd_A          145 -------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERH------PLRKFA  210 (244)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHS------TTSSCB
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcC------CccCCC
Confidence                   1466999999999999988766   5899999999999987532110 1123333333332      457899


Q ss_pred             cHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          227 DVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +++|+|++++.++..+..  .| .+++++
T Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 1cyd_A          211 EVEDVVNSILFLLSDRSASTSGGGILVDA  239 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             CHHHHHHHHHHHhCchhhcccCCEEEECC
Confidence            999999999999976532  34 556654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.96  E-value=1.4e-29  Score=216.43  Aligned_cols=241  Identities=19%  Similarity=0.194  Sum_probs=175.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC---CCeEEEEccCCChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS---ENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+.+.. ....+++...+   .++.++.+|++|.+++.++++  
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKL-AGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999986542 22223332222   278899999999999888775  


Q ss_pred             -----CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCc
Q 020924           76 -----GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                           .+|++|||||.....     ...+.+...+++|+.++.++++++.+.    +..+||++||..++.+.+.     
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  160 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW-----  160 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT-----
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC-----
Confidence                 579999999973321     112234678899999999999988754    4459999999887654431     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                      ...|+.||.+.+.+++.++.++   +++++.++||.++++...... .............    
T Consensus       161 ----------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~----  219 (281)
T 3svt_A          161 ----------------FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCT----  219 (281)
T ss_dssp             ----------------CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHC----
T ss_pred             ----------------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcC----
Confidence                            4669999999999999887653   699999999999987532110 0112222222222    


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCC-HHHHHHHHHHhCCC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIR-ARDLVDKLKSLYPN  270 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s-~~e~~~~~~~~~g~  270 (319)
                        ....+.+++|+|+++++++.....  .| .++++| ...+ ..++++.+.+.+|.
T Consensus       220 --p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          220 --PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             --SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred             --CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCC
Confidence              456788999999999999976432  34 677764 5555 67888888887764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=6.4e-29  Score=210.38  Aligned_cols=228  Identities=13%  Similarity=0.118  Sum_probs=164.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+.... .....++... +.++.++.+|++|.+++.++++    
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRL-HEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            346779999999999999999999999999999999976432 1222222211 3578999999999999988776    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         ++|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+         
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  152 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW---------  152 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC---------
Confidence               6899999999754321    1223467889999999999998863    4678999999987765432         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKE  213 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~  213 (319)
                                  +...|+.||.+.+.+++.++.+   +|++++++|||.++++.......        ............
T Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
T 3ai3_A          153 ------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE  220 (263)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc
Confidence                        1466999999999999988765   58999999999999875321000        001111111111


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccC
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMI  255 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~  255 (319)
                           ..+.+.+++++|+|+++++++..+..  .| .++++| ...
T Consensus       221 -----~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          221 -----HAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             -----HCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             -----CCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence                 01345789999999999999975432  34 567765 443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.3e-28  Score=208.69  Aligned_cols=231  Identities=14%  Similarity=0.163  Sum_probs=162.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+..........++... ..++.++.+|++|.+++.++++    
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45778999999999999999999999999999999986543323333333322 4578999999999999988775    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         .+|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.        
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  172 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF--------  172 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC--------
Confidence               6899999999764432    123346789999999999999984    446679999999877654431        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhc----Cccc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKE----GYES  217 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~----~~~~  217 (319)
                                   ...|+.||.+.+.+++.++.+   +|++++.++||.+.++............ ......    ....
T Consensus       173 -------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~  238 (281)
T 3v2h_A          173 -------------KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQART-RGITEEQVINEVML  238 (281)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhh-cCCCHHHHHHHHHH
Confidence                         466999999999999888765   4899999999999988643221100000 000000    0011


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .+.+.+++++++|+|+++++++....  ..| .++++|.
T Consensus       239 ~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          239 KGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             -CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             hcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            23366789999999999999997653  234 5677653

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.96  E-value=1.5e-28  Score=209.33  Aligned_cols=225  Identities=20%  Similarity=0.135  Sum_probs=164.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+..........++...+.++.++.+|++|.+++.++++     
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            567889999999999999999999999999999999843322222233333334678899999999999988876     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEecccccc-ccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAV-GLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~-~~~~~~~~~~~~~E  145 (319)
                        ++|+|||+||......    ..+.+...+++|+.++.++++++.+.   + ++||++||..++ .+.+          
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~----------  165 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIP----------  165 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCC----------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCC----------
Confidence              6899999999754321    11223678899999999999999875   4 699999998766 3221          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCC-----C----Ccc-HHHHHHHHh
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSK-----V----NTS-SLVLIKLLK  212 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~-----~----~~~-~~~~~~~~~  212 (319)
                                 +...|+.+|.+.|.+++.++.++   +++++++||+.++++.....     .    ... .........
T Consensus       166 -----------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (274)
T 1ja9_A          166 -----------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN  234 (274)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh
Confidence                       14669999999999999887654   89999999999988642200     0    011 112222222


Q ss_pred             cCccccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          213 EGYESLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       213 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +      .+.+++++++|+|++++.++..+..  .| .|++++.
T Consensus       235 ~------~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          235 M------NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             T------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c------CCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            2      2456799999999999999976432  34 6777764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=1.2e-27  Score=203.23  Aligned_cols=219  Identities=17%  Similarity=0.126  Sum_probs=166.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+++||||+|+||++++++|+++|++|++++|+..... ....++   +.++.++.+|++|.+++.++++      
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLA-GAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHH-HHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999876432 222222   4578899999999999998876      


Q ss_pred             -CcceEEEecccCCC-C-----CCCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 -GCNGVFHIACPAPS-T-----TVPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 -~~d~vi~~a~~~~~-~-----~~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                       .+|++|||||.... .     ...+.++..+++|+.++.++++++    ++.+.++||++||..++.+.+         
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  154 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD---------  154 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS---------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC---------
Confidence             68999999997632 1     112334678999999999999999    455677999999987765442         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +...|+.||.+.+.+++.++.+   +|++++.++||.++++.....  .............      .
T Consensus       155 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------~  214 (271)
T 3tzq_B          155 ------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG--LPQPIVDIFATHH------L  214 (271)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTS------T
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc--CCHHHHHHHHhcC------C
Confidence                        1567999999999999988776   689999999999999865422  1222222222221      3


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ...+.+++|+|+++++++.....  .| .++++|.
T Consensus       215 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          215 AGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            45678999999999999976432  44 5677664

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.96  E-value=5.8e-29  Score=210.02  Aligned_cols=222  Identities=14%  Similarity=0.128  Sum_probs=164.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcC-CChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTARE-PSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |++|+|+||||+|+||++++++|+++|++|++++|+ .... .....++...+.++.++.+|++|.+++.++++      
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANI-DETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999998 4432 22223333334578999999999999998876      


Q ss_pred             -CcceEEEeccc-CCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C--C---CEEEEeccccccc-cCCCCCC
Q 020924           76 -GCNGVFHIACP-APSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K--V---KRVIVVSSGVAVG-LNPRWPK  139 (319)
Q Consensus        76 -~~d~vi~~a~~-~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~--~---~~iv~~SS~~~~~-~~~~~~~  139 (319)
                       ++|+||||||. .....    ..+.+...+++|+.++.++++++.+.    +  .   ++||++||..++. +.+    
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  159 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP----  159 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT----
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC----
Confidence             78999999996 32211    11224567899999999999987542    2  2   6999999977654 221    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (319)
                                       +...|+.||.+.|.+++.++.+.   +++++++||+.++++.....   ...+......+.  
T Consensus       160 -----------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--  217 (258)
T 3afn_B          160 -----------------GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGI--  217 (258)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTC--
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccC--
Confidence                             15679999999999998887653   89999999999999865432   233333333322  


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC---CCc-eEEEecccC
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE---AEG-RYICTAHMI  255 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~~~~~~~  255 (319)
                          ..+++++++|+|++++.++....   ..| .|++++...
T Consensus       218 ----~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          218 ----PMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             ----TTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             ----CCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence                34578999999999999997642   234 678876543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=1.7e-28  Score=207.25  Aligned_cols=222  Identities=15%  Similarity=0.131  Sum_probs=163.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.... .....++   ..++.++.+|++|.+++.++++      
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERA-RQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            36679999999999999999999999999999999876532 1222222   3578899999999999988876      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+.    + ..+||++||..++.+.+.         
T Consensus        81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  151 (259)
T 4e6p_A           81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL---------  151 (259)
T ss_dssp             SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC---------
Confidence             6899999999754321    12334677889999999999998754    2 459999999887665431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc---cc--
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY---ES--  217 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~---~~--  217 (319)
                                  ...|+.||.+.+.+++.++.++   |++++.++||.++++.....    ...+........   ..  
T Consensus       152 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~  215 (259)
T 4e6p_A          152 ------------VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----DALFARYENRPRGEKKRLV  215 (259)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----HHHHHHHHTCCTTHHHHHH
T ss_pred             ------------ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----hhhhhhhccCChHHHHHHH
Confidence                        4669999999999999887653   89999999999998853211    111111111000   00  


Q ss_pred             -cCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          218 -LENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       218 -~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                       .+.+.+++.+++|+|+++++++.....  .| .++++|
T Consensus       216 ~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdg  254 (259)
T 4e6p_A          216 GEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDG  254 (259)
T ss_dssp             HHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             hccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECc
Confidence             122667899999999999999975432  34 677765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=4.7e-28  Score=204.79  Aligned_cols=221  Identities=18%  Similarity=0.173  Sum_probs=165.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC-CCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS-ENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.++. .....++...+ .++.++.+|++|.++++++++    
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADI-DACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999986542 22233333333 578999999999999988775    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEecccccc-ccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAV-GLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~-~~~~~~~~~~~~  143 (319)
                         .+|++|||||......    ..+.+...+++|+.++.++++++.+.    +.++||++||..+. .+.+        
T Consensus        85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------  156 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYP--------  156 (262)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT--------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC--------
Confidence               6899999999764332    12234667899999999999998765    66799999997654 3222        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   +...|+.||.+.+.+++.++.+   +|++++.++||.++++.....   ............      
T Consensus       157 -------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~------  214 (262)
T 3pk0_A          157 -------------GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSI------  214 (262)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTS------
T ss_pred             -------------CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcC------
Confidence                         1567999999999999988776   589999999999998753221   122333332222      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ....+.+++|+|+++++++....  ..| .++++|
T Consensus       215 p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  249 (262)
T 3pk0_A          215 PAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDG  249 (262)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            34567899999999999997543  244 567765

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.96  E-value=1.2e-28  Score=209.06  Aligned_cols=222  Identities=13%  Similarity=0.103  Sum_probs=147.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh------
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI------   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   74 (319)
                      |+|++|+||||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.+++      
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL-NECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            567789999999999999999999999999999999975432 2222333323457899999999999888876      


Q ss_pred             --cCcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           75 --VGCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        75 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        ..+|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+         
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  159 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS---------  159 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC---------
Confidence              46899999999754321    122346678999999999999984    45778999999987665432         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +...|+.+|.+.+.+++.++.+   .|++++++||+.++|+......  ...+.......      ..
T Consensus       160 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~------~~  219 (266)
T 1xq1_A          160 ------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISR------KP  219 (266)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhc------CC
Confidence                        1456999999999999988765   3899999999999998643221  01111111111      13


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ...+++++|+|+++++++....  ..| .++++|
T Consensus       220 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  253 (266)
T 1xq1_A          220 LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDG  253 (266)
T ss_dssp             ----CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcC
Confidence            3468899999999999997542  234 566654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=2.9e-28  Score=205.35  Aligned_cols=226  Identities=15%  Similarity=0.097  Sum_probs=167.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.++++++++     
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGA-EAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999976532 22233333345689999999999999888775     


Q ss_pred             --CcceEEEecccCCCCC---CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTT---VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|++|||||......   ..+.++..+++|+.++.++++++.    +.+.++||++||..++.+.+           
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  155 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV-----------  155 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT-----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC-----------
Confidence              6899999999765432   122346789999999999999985    34567999999987765432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....  ............      .+.+
T Consensus       156 ----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~------~p~~  217 (256)
T 3gaf_A          156 ----------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV--LTPEIERAMLKH------TPLG  217 (256)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH--CCHHHHHHHHTT------CTTS
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc--cCHHHHHHHHhc------CCCC
Confidence                      1566999999999999988765   489999999999988642211  011222222222      2456


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCC
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIR  256 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s  256 (319)
                      .+.+++|+|+++++++.....  .| .++++| ...+
T Consensus       218 r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          218 RLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            789999999999999975432  34 567765 4443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=7.2e-28  Score=203.30  Aligned_cols=211  Identities=14%  Similarity=0.174  Sum_probs=161.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+.....          ..++.++.+|++|.+++.++++     
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999866321          2368999999999999988876     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        ++|++|||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..+..+.+.         
T Consensus        94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------  164 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG---------  164 (260)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT---------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC---------
Confidence              6899999999764321    122346788999999999999884    556789999999765432211         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                .+...|+.||.+.+.+++.++.++   |+++++++||.++++.....      ........      .+.
T Consensus       165 ----------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~~~------~p~  222 (260)
T 3un1_A          165 ----------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE------THSTLAGL------HPV  222 (260)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG------GHHHHHTT------STT
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH------HHHHHhcc------CCC
Confidence                      125679999999999999988775   89999999999999864321      11111111      245


Q ss_pred             cccccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      +.+.+++|+|++++++.+.....| .++++|
T Consensus       223 ~r~~~~~dva~av~~L~~~~~itG~~i~vdG  253 (260)
T 3un1_A          223 GRMGEIRDVVDAVLYLEHAGFITGEILHVDG  253 (260)
T ss_dssp             SSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHhcccCCCCCcEEEECC
Confidence            678899999999999955544455 567765

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=1.9e-27  Score=203.26  Aligned_cols=226  Identities=16%  Similarity=0.145  Sum_probs=165.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh----------h-hHHHHHhhhccCCCeEEEEccCCChhhH
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD----------E-KNARLYELEKASENLKLFKADLLDYDSV   70 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+...          . .......+...+.++.++.+|++|.+++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            4678999999999999999999999999999999997431          1 1122223333456889999999999999


Q ss_pred             HHHhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCC
Q 020924           71 KSAIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNP  135 (319)
Q Consensus        71 ~~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~  135 (319)
                      +++++       .+|++|||||......    ..+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF  166 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence            88775       6899999999765321    1233467889999999999999743    4667999999987765442


Q ss_pred             CCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC----------Cc
Q 020924          136 RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV----------NT  202 (319)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~----------~~  202 (319)
                                           +...|+.||.+.+.+++.++.+   +|++++.++||.++++......          ..
T Consensus       167 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  225 (281)
T 3s55_A          167 ---------------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP  225 (281)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------C
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccccc
Confidence                                 1566999999999999988775   4899999999999998754210          00


Q ss_pred             cHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          203 SSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...........    .....+++++++|+|+++++++.....  .| .++++|
T Consensus       226 ~~~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  274 (281)
T 3s55_A          226 TLKDVESVFAS----LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA  274 (281)
T ss_dssp             CHHHHHHHHHH----HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             chhHHHHHHHh----hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence            00000010000    112337899999999999999986543  34 567765

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.96  E-value=1.8e-27  Score=201.86  Aligned_cols=219  Identities=17%  Similarity=0.148  Sum_probs=165.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+...........+...+.++.++.+|++|.++++++++     
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999865443333333444445688999999999999988775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||.+++.+.+.         
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  174 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG---------  174 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC---------
Confidence              6899999999765421    1233567899999999999998854    45679999999887765431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.||.+.+.+++.++.+   +|++++.++||.+.++....      .........      ...
T Consensus       175 ------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------~~~~~~~~~------~p~  230 (269)
T 4dmm_A          175 ------------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE------LAAEKLLEV------IPL  230 (269)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH------HHHHHHGGG------CTT
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc------ccHHHHHhc------CCC
Confidence                        466999999999988887765   48999999999999886431      111122111      145


Q ss_pred             cccccHHHHHHHHHHhhccCCC---Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA---EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~---~~-~~~~~~  252 (319)
                      ..+.+++|+|+++++++..+..   .| .++++|
T Consensus       231 ~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          231 GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence            6788999999999999986322   34 567765

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.96  E-value=6.5e-28  Score=203.80  Aligned_cols=224  Identities=15%  Similarity=0.088  Sum_probs=162.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh------
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI------   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   74 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.+++      
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKEL-NDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457789999999999999999999999999999999976532 2222333323457889999999999988877      


Q ss_pred             --cCcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           75 --VGCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        75 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        ..+|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+         
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  154 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP---------  154 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT---------
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC---------
Confidence              46899999999754321    122346788999999999999985    45667999999987654332         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCcc--HHHHHHHHhcCccccC
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTS--SLVLIKLLKEGYESLE  219 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~  219 (319)
                                  +...|+.||.+.+.+++.++.++   |+++++++||.+.++.........  ...+......      
T Consensus       155 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------  216 (260)
T 2ae2_A          155 ------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR------  216 (260)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT------
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc------
Confidence                        14669999999999999887664   899999999999876421100000  0001111111      


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+.+.+++++|+|+++++++....  ..| .++++|
T Consensus       217 ~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  252 (260)
T 2ae2_A          217 CALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG  252 (260)
T ss_dssp             STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            134568999999999999997542  234 566665

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=5.6e-28  Score=202.34  Aligned_cols=219  Identities=18%  Similarity=0.190  Sum_probs=161.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Cc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   77 (319)
                      |++++|+|+||||+|+||++++++|+++|++|++++|+.++.. ....++    .+.+++.+|++|.+++.++++   .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~i   77 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD-SLVREC----PGIEPVCVDLGDWEATERALGSVGPV   77 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHc----CCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence            4467789999999999999999999999999999999754321 111221    356788999999999999886   47


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |+|||+||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+             
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  144 (244)
T 3d3w_A           78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-------------  144 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-------------
T ss_pred             CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC-------------
Confidence            99999999754321    11234678999999999999988754    4 67999999977654321             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                              +.+.|+.||.+.|.+++.++.+   ++++++++||+.++++........ ...........      +.+++
T Consensus       145 --------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~------~~~~~  209 (244)
T 3d3w_A          145 --------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRI------PLGKF  209 (244)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-TTHHHHHHHTC------TTCSC
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-hHHHHHHHhhC------CCCCC
Confidence                    1567999999999999988765   489999999999998753211000 01112222221      34678


Q ss_pred             ccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          226 VDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ++++|+|++++.++....  ..| .|++++
T Consensus       210 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 3d3w_A          210 AEVEHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            999999999999997642  234 677765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=4.1e-28  Score=204.70  Aligned_cols=218  Identities=20%  Similarity=0.217  Sum_probs=156.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+...... ...++   ..++.++.+|++|.+++.++++     
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE-PAAEL---GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998764321 11222   3468899999999999988876     


Q ss_pred             --CcceEEEecccCCCCC--------CCCccchhhhhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCC
Q 020924           76 --GCNGVFHIACPAPSTT--------VPNPQMELLEPAVKGTLNVVKACLEA----------KVKRVIVVSSGVAVGLNP  135 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~--------~~~~~~~~~~~Nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~~~~~~  135 (319)
                        .+|++|||||......        ..+.+...+++|+.++.++++++.+.          +..+||++||..++.+.+
T Consensus        79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence              6899999999764321        11334678899999999999999764          345899999988776543


Q ss_pred             CCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHh
Q 020924          136 RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK  212 (319)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~  212 (319)
                      .                     ...|+.||.+.+.+++.++.+   +|++++.++||.+.++......   .........
T Consensus       159 ~---------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~  214 (257)
T 3tpc_A          159 G---------------------QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP---QDVQDALAA  214 (257)
T ss_dssp             T---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------C
T ss_pred             C---------------------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC---HHHHHHHHh
Confidence            1                     566999999999998888765   5899999999999988643211   111111111


Q ss_pred             cCccccCCcc-cccccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          213 EGYESLENKL-RMIVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       213 ~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                            .... ..+.+++|+|+++++++......| .++++|
T Consensus       215 ------~~p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tpc_A          215 ------SVPFPPRLGRAEEYAALVKHICENTMLNGEVIRLDG  250 (257)
T ss_dssp             ------CSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             ------cCCCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECC
Confidence                  1123 568999999999999998654455 456665

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=5.6e-28  Score=205.36  Aligned_cols=222  Identities=13%  Similarity=0.088  Sum_probs=165.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..  ......++...+.++.++.+|++|.+++.++.+     
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG--VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH--HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence            4567899999999999999999999999999999997643  233334444445678999999999998887654     


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.          
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~----------  174 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN----------  174 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS----------
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC----------
Confidence             6899999999765432    123346789999999999999884    346679999999877654431          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.||.+.+.+++.++.+   +|++++.++||.+.++...... .............      ..+
T Consensus       175 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~------p~~  236 (273)
T 3uf0_A          175 -----------VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR-ADDERAAEITARI------PAG  236 (273)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHS------TTS
T ss_pred             -----------ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcC------CCC
Confidence                       566999999999999988766   5899999999999987532110 0112222222222      446


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+.+++|+|+++++++....  ..| .++++|
T Consensus       237 r~~~pedva~~v~~L~s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          237 RWATPEDMVGPAVFLASDAASYVHGQVLAVDG  268 (273)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            78899999999999997643  244 567765

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.96  E-value=1.8e-27  Score=202.42  Aligned_cols=225  Identities=14%  Similarity=0.121  Sum_probs=160.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh------
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI------   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   74 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.+++      
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL-DECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999986432 2222333333457899999999999988876      


Q ss_pred             --cCcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           75 --VGCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        75 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        ..+|++|||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+         
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  166 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP---------  166 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT---------
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC---------
Confidence              46899999999754321    122346678899999999999885    34567999999987765432         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc---cHHHHHHHHhcCcccc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT---SSLVLIKLLKEGYESL  218 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~  218 (319)
                                  +...|+.||.+.+.+++.++.+   +|+++++++||.++++........   ............    
T Consensus       167 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----  230 (273)
T 1ae1_A          167 ------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT----  230 (273)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS----
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC----
Confidence                        1466999999999999888765   389999999999999864321110   111222222221    


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                        ....+.+++|+|+++++++....  ..| .+.++|.
T Consensus       231 --p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          231 --PMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             --TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence              33468899999999999997542  234 5666653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.96  E-value=1.2e-27  Score=200.64  Aligned_cols=221  Identities=15%  Similarity=0.188  Sum_probs=167.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+.... ......+...+.++.++.+|++|.+++.++++     
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASA-EKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999976532 22223333335678999999999999988775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+.         
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  150 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG---------  150 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT---------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC---------
Confidence              4799999999764421    1233467899999999999998864    35569999999887765431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....   ...........      .+.
T Consensus       151 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~------~~~  209 (247)
T 3lyl_A          151 ------------QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL---TDEQKSFIATK------IPS  209 (247)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS---CHHHHHHHHTT------STT
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc---cHHHHHHHhhc------CCC
Confidence                        566999999999988887765   489999999999998865432   12222222111      245


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+.+++|+|+++++++.....  .| .++++|
T Consensus       210 ~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          210 GQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            6789999999999999975432  34 567765

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.96  E-value=9.7e-28  Score=201.34  Aligned_cols=221  Identities=18%  Similarity=0.123  Sum_probs=161.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +|++|+|+||||+|+||++++++|+++|++|++++|+..... ....++.. .+.++.++.+|++|.+++.++++     
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAK-AVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            366789999999999999999999999999999999754321 11122211 23578999999999999998876     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        ++|+|||+||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++++.+.         
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------  153 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG---------  153 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT---------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC---------
Confidence              6899999999754321    112346789999999977777654    456789999999877665421         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+++.++.+   .+++++++||+.++++.....   ............      ..
T Consensus       154 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~  212 (248)
T 2pnf_A          154 ------------QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL---SEEIKQKYKEQI------PL  212 (248)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC------TT
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc---cHHHHHHHHhcC------CC
Confidence                        456999999999999887664   489999999999998864321   122222221111      33


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ..+++++|+|++++.++....  ..| .|+++|.
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          213 GRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            568999999999999997532  234 6777653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=1.5e-27  Score=201.18  Aligned_cols=223  Identities=14%  Similarity=0.090  Sum_probs=162.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++      
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKL-EEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            47789999999999999999999999999999999986542 22333443445678999999999999988775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE-----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~-----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|++|||||......    ..+.+...+++|+.++.++++++.+     .+.++||++||..++.+.+.         
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  152 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG---------  152 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC---------
Confidence             5799999999654321    1233467899999999999999843     34679999999877654431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  ...|+.||.+.+.+++.++.+    +|++++.++||.+.++...................      ..
T Consensus       153 ------------~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------~p  214 (257)
T 3imf_A          153 ------------VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQS------VP  214 (257)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTT------ST
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhc------CC
Confidence                        466999999999888877643    48999999999999875432210000011111111      14


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...+.+++|+|+++++++.....  .| .++++|
T Consensus       215 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  248 (257)
T 3imf_A          215 LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDG  248 (257)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            45688999999999999976532  44 566665

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=4.3e-27  Score=200.93  Aligned_cols=226  Identities=15%  Similarity=0.130  Sum_probs=163.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC-----------Chhh-HHHHHhhhccCCCeEEEEccCCChhh
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP-----------SDEK-NARLYELEKASENLKLFKADLLDYDS   69 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~   69 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.           .... ......+...+.++.++.+|++|.++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            36789999999999999999999999999999999842           1111 12223333345678999999999999


Q ss_pred             HHHHhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEecccccccc
Q 020924           70 VKSAIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGL  133 (319)
Q Consensus        70 ~~~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~  133 (319)
                      ++++++       .+|++|||||......    ..+.++..+++|+.++.++++++.+.    + .++||++||..++.+
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  171 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA  171 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence            988775       6899999999765331    12334678899999999999998542    3 568999999877654


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHH
Q 020924          134 NPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKL  210 (319)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~  210 (319)
                      .+.                     ...|+.||.+.+.+++.++.+   +|++++.++||.++++....      ......
T Consensus       172 ~~~---------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~------~~~~~~  224 (280)
T 3pgx_A          172 TPG---------------------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP------EAMMEI  224 (280)
T ss_dssp             CTT---------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH------HHHHHH
T ss_pred             CCC---------------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch------hhhhhh
Confidence            431                     466999999999999988765   58999999999999986432      111111


Q ss_pred             HhcCcc------ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEeccc
Q 020924          211 LKEGYE------SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAHM  254 (319)
Q Consensus       211 ~~~~~~------~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~  254 (319)
                      ....+.      ........+++++|+|+++++++....  ..| .++++|..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          225 FARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            111110      111222248999999999999997544  244 56776643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.96  E-value=5.6e-28  Score=204.70  Aligned_cols=223  Identities=19%  Similarity=0.166  Sum_probs=158.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC-------CCeEEEEccCCChhhHHHHhc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS-------ENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      |++|+|+||||+|+||++++++|+++|++|++++|+.... ......+...+       .++.++.+|++|.+++.++++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAA-QETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            6778999999999999999999999999999999975532 12222222111       468899999999999888776


Q ss_pred             C-------c-ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCC
Q 020924           76 G-------C-NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWP  138 (319)
Q Consensus        76 ~-------~-d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~  138 (319)
                      .       + |+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+   
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  160 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV---  160 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT---
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC---
Confidence            4       3 99999999754321    12234678999999999999998764    4 56999999987765432   


Q ss_pred             CCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc
Q 020924          139 KGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  215 (319)
                                        +...|+.+|.+.+.+++.++.+   +|++++++||+.++|+.....   ...+......+  
T Consensus       161 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~--  217 (264)
T 2pd6_A          161 ------------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEM--  217 (264)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGG--
T ss_pred             ------------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHh--
Confidence                              1466999999999999888765   689999999999999864321   11111111111  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec-ccCC
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA-HMIR  256 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s  256 (319)
                          .....+++++|+|++++.++....  ..| .+.++| ..++
T Consensus       218 ----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          218 ----IPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             ----CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC---
T ss_pred             ----CCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceec
Confidence                134568899999999999997542  234 566665 4433

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=4.7e-29  Score=210.14  Aligned_cols=226  Identities=18%  Similarity=0.093  Sum_probs=159.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----CcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----GCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~v   80 (319)
                      ||+||||||||+||++++++|+++|++|++++|+.+...           .   .+.+|++|.+++..+++    ++|+|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~---~~~~D~~~~~~~~~~~~~~~~~~d~v   66 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------A---DLSTPGGRETAVAAVLDRCGGVLDGL   66 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C---CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------c---cccCCcccHHHHHHHHHHcCCCccEE
Confidence            468999999999999999999999999999999865321           0   15689999999988886    79999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC-------CCCC
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE-------TCWS  149 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E-------~~~~  149 (319)
                      |||||....   ..++...+++|+.++.++++++.+.    +.++||++||..++++...   ..+..|       +.+.
T Consensus        67 i~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~~~~~~~~~~~~~~~  140 (255)
T 2dkn_A           67 VCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA---ELPMVEAMLAGDEARAI  140 (255)
T ss_dssp             EECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG---GCHHHHHHHHTCHHHHH
T ss_pred             EECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc---ccchhhhhcccchhhhh
Confidence            999997542   2345889999999999999988764    5689999999887754321   111111       1000


Q ss_pred             C-ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCccc
Q 020924          150 D-KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLR  223 (319)
Q Consensus       150 ~-~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  223 (319)
                      . .+.+..+.+.|+.+|.+.|.+++.++++   ++++++++||+.++|+....       .+.....+....  .+ ..+
T Consensus       141 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~-------~~~~~~~~~~~~~~~~-~~~  212 (255)
T 2dkn_A          141 ELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA-------SKADPRYGESTRRFVA-PLG  212 (255)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH-------HHHCTTTHHHHHSCCC-TTS
T ss_pred             hhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh-------cccchhhHHHHHHHHH-Hhc
Confidence            0 0000013567999999999999998765   68999999999999874211       100000000000  12 556


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec-ccCCHH
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA-HMIRAR  258 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s~~  258 (319)
                      ++++++|+|++++.++..+.  ..| .|++++ ...+++
T Consensus       213 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          213 RGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             CCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            89999999999999998752  334 677765 455443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.96  E-value=3.7e-27  Score=196.21  Aligned_cols=225  Identities=15%  Similarity=0.113  Sum_probs=168.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+++||||++.||++++++|+++|++|++.+|+.+. .....+++...+.++.++.+|++|+++++++++     
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~-~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDR-LNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999997654 233444555556789999999999999988764     


Q ss_pred             --CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||.....     ...+.|+..+++|+.++..+++++.+.    +-.+||++||.++..+.+.        
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~--------  153 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA--------  153 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS--------
T ss_pred             cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC--------
Confidence              579999999965321     123346788999999999999888653    5579999999887765432        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ..+|+.||.+...+.+.++.+   +|++++.|.||.+.++....................+     .
T Consensus       154 -------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-----~  215 (254)
T 4fn4_A          154 -------------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-----L  215 (254)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-----T
T ss_pred             -------------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-----C
Confidence                         466999999998888877655   4899999999999887644332222222222222211     2


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...+..++|+|.++++++.....  .| .+.++|
T Consensus       216 ~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          216 SSRLAEPEDIANVIVFLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             CCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCC
Confidence            34577899999999999975432  44 345554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.96  E-value=1.2e-27  Score=201.06  Aligned_cols=220  Identities=15%  Similarity=0.157  Sum_probs=160.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh-hccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL-EKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... ....++ ...+.++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLE-ETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999754321 122222 2223568999999999999988876       6


Q ss_pred             cceEEEecccCCCCC-------CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           77 CNGVFHIACPAPSTT-------VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~-------~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      +|+||||||......       ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+          
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  150 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP----------  150 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC----------
Confidence            899999999754321       1122467889999999887777754    4678999999987765432          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.+|.+.+.+++.++.++   +++++++||+.++|+...... ....+........      ..
T Consensus       151 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~  212 (250)
T 2cfc_A          151 -----------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL-DQPELRDQVLARI------PQ  212 (250)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH-TSHHHHHHHHTTC------TT
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc-CCHHHHHHHHhcC------CC
Confidence                       14669999999999999887654   899999999999998643200 0112222222221      34


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ..+.+++|+|++++.++..+..  .| .++++|.
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          213 KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            5688999999999999986532  34 5666653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.96  E-value=3.7e-27  Score=198.75  Aligned_cols=220  Identities=13%  Similarity=0.061  Sum_probs=163.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-EcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGT-AREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ++|++|||||+|+||++++++|+++|++|+++ .|+... ......++...+.++.++.+|++|.++++++++       
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKA-ALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999987 555432 223333444445689999999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    ..+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+            
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------  149 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE------------  149 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC------------
Confidence            4699999999654321    1223466799999999999999853    4567999999987765432            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               +...|+.||.+.+.+++.++.++   |++++.++||.+.++....... ............      ..+.
T Consensus       150 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~------p~~r  213 (258)
T 3oid_A          150 ---------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNT------PAGR  213 (258)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHC------TTSS
T ss_pred             ---------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcC------CCCC
Confidence                     15679999999999999887764   8999999999999876443211 122223332222      4567


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +.+++|+|+++++++.....  .| .++++|
T Consensus       214 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdG  244 (258)
T 3oid_A          214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDG  244 (258)
T ss_dssp             CBCHHHHHHHHHHHTSSTTTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence            88999999999999986532  34 567765

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.96  E-value=1.1e-27  Score=201.74  Aligned_cols=217  Identities=16%  Similarity=0.082  Sum_probs=160.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh-hhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLLDY-DSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~---   75 (319)
                      |+|++|+|+||||+|+||++++++|+++|++ |++++|+........+.... ...++.++.+|++|. +++.++++   
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHHHH
Confidence            8899999999999999999999999999997 99999987532222222221 134688999999998 88877665   


Q ss_pred             ----CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-------CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ----GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-------VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-------~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                          ++|+||||||....    +.+...+++|+.++.++++++.+..       .++||++||.+++.+.+         
T Consensus        80 ~~~g~id~lv~~Ag~~~~----~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  146 (254)
T 1sby_A           80 DQLKTVDILINGAGILDD----HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH---------  146 (254)
T ss_dssp             HHHSCCCEEEECCCCCCT----TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT---------
T ss_pred             HhcCCCCEEEECCccCCH----HHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC---------
Confidence                68999999997532    3458899999999999999987531       35899999987765432         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCcc--HHHHHHHHhcCccccC
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTS--SLVLIKLLKEGYESLE  219 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~  219 (319)
                                  ....|+.||.+.+.+++.++.+   +|+++++++||.+.++.........  ...+.....       
T Consensus       147 ------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------  207 (254)
T 1sby_A          147 ------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL-------  207 (254)
T ss_dssp             ------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT-------
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh-------
Confidence                        1466999999999999988765   5899999999999987532211000  000111111       


Q ss_pred             CcccccccHHHHHHHHHHhhccCCCCceEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEAEGRYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  252 (319)
                        ...+.+++|+|++++.+++....+..|+++|
T Consensus       208 --~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~g  238 (254)
T 1sby_A          208 --SHPTQTSEQCGQNFVKAIEANKNGAIWKLDL  238 (254)
T ss_dssp             --TSCCEEHHHHHHHHHHHHHHCCTTCEEEEET
T ss_pred             --cCCCCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence              1124589999999999997554444677765

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=1.9e-27  Score=203.86  Aligned_cols=221  Identities=22%  Similarity=0.194  Sum_probs=164.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC-CCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS-ENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+.... .....++...+ .++.++.+|++|.++++++++    
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL-SSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-HHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999987643 22333333333 578999999999998887765    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEecccccc-ccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAV-GLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~-~~~~~~~~~~~~  143 (319)
                         .+|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..+. .+.+        
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~--------  187 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYP--------  187 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCT--------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCC--------
Confidence               5799999999764432    122346789999999999999984    4567799999997754 3332        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   ....|+.||.+.+.+++.++.+   +|++++.++||.++++.....   ............      
T Consensus       188 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~------  245 (293)
T 3rih_A          188 -------------GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---GEEYISGMARSI------  245 (293)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTS------
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---cHHHHHHHHhcC------
Confidence                         1567999999999999988765   489999999999998753211   122223332222      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ....+..++|+|+++++++....  ..| .++++|
T Consensus       246 p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  280 (293)
T 3rih_A          246 PMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDG  280 (293)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            34557799999999999997543  234 566765

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.96  E-value=6.2e-28  Score=204.03  Aligned_cols=228  Identities=16%  Similarity=0.117  Sum_probs=164.4

Q ss_pred             CCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +|++|++|||||+  |+||++++++|+++|++|++++|+..  ....++++......+.++.+|++|.+++.++++    
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER--LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG--GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            4778999999999  99999999999999999999999864  222233332212347889999999999888775    


Q ss_pred             ---CcceEEEecccCCC--------CCCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcc
Q 020924           76 ---GCNGVFHIACPAPS--------TTVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                         .+|+||||||....        ....+.+...+++|+.++.++++++.+..  .++||++||..++.+.+       
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------  155 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-------  155 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-------
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC-------
Confidence               67999999997542        11223356789999999999999998762  25999999977655432       


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                    +...|+.||.+.+.+++.++.++   |+++++++||.++++..... ..............     
T Consensus       156 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~-----  215 (261)
T 2wyu_A          156 --------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTA-----  215 (261)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHHS-----
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhcC-----
Confidence                          14569999999999999887654   89999999999999864322 11122223332222     


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCCHHH
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIRARD  259 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s~~e  259 (319)
                       ....+.+++|+|+++++++.....  .| .++++| ...+..|
T Consensus       216 -p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          216 -PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             -TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             -CCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence             234578999999999999975332  34 567765 4444333

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.96  E-value=2.7e-27  Score=200.59  Aligned_cols=218  Identities=19%  Similarity=0.141  Sum_probs=161.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+|+||||+|+||++++++|+++|++|++++|+..... ....++   +.++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE-AQAKKL---GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH-HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            6778899999999999999999999999999999999876432 222222   3578999999999999998876     


Q ss_pred             --CcceEEEecccCCCCC----------CCCccchhhhhHHHHHHHHHHHHHhC----------CCCEEEEecccccccc
Q 020924           76 --GCNGVFHIACPAPSTT----------VPNPQMELLEPAVKGTLNVVKACLEA----------KVKRVIVVSSGVAVGL  133 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----------~~~~~~~~~~~Nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~~~~  133 (319)
                        .+|+||||||......          ..+.+...+++|+.++.++++++.+.          +.++||++||..++.+
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  163 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  163 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence              7899999999754321          11224678899999999999999865          5679999999877654


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHH
Q 020924          134 NPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKL  210 (319)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~  210 (319)
                      .+                     +...|+.+|.+.+.+++.++.+   .++++++++||.+.++......   .......
T Consensus       164 ~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~  219 (265)
T 2o23_A          164 QV---------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP---EKVCNFL  219 (265)
T ss_dssp             CT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHH
T ss_pred             CC---------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC---HHHHHHH
Confidence            32                     1466999999999988887655   4899999999999887543210   0111111


Q ss_pred             HhcCccccCCcc-cccccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          211 LKEGYESLENKL-RMIVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       211 ~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      ....      .. ..+++++|+|+++++++......| .+.++|
T Consensus       220 ~~~~------~~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          220 ASQV------PFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             HHTC------SSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHcC------CCcCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence            1111      22 458899999999999997655555 566665

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=2.9e-27  Score=198.29  Aligned_cols=219  Identities=21%  Similarity=0.206  Sum_probs=164.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..... ...+.+   ..+...+.+|++|.++++++++     
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQ-AISDYL---GDNGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---cccceEEEEeCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999765321 122222   2357889999999999988876     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||.+++.+.+.         
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------  151 (248)
T 3op4_A           81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG---------  151 (248)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC---------
Confidence              6899999999765421    1233567899999999999999865    45679999999887765431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.||.+.+.+.+.++.+   +|++++.++||.+.++.....   ............      +.
T Consensus       152 ------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~------p~  210 (248)
T 3op4_A          152 ------------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL---NDEQRTATLAQV------PA  210 (248)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS---CHHHHHHHHHTC------TT
T ss_pred             ------------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc---CHHHHHHHHhcC------CC
Confidence                        566999999999988887765   489999999999998764422   122222222222      45


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +.+.+++|+|+++++++.....  .| .++++|.
T Consensus       211 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          211 GRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            6788999999999999975432  34 5677654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.96  E-value=4.6e-27  Score=199.35  Aligned_cols=221  Identities=14%  Similarity=0.142  Sum_probs=166.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+|+||||+|+||++++++|+++|++|+++.++.........+.+...+.++.++.+|++|.+++.++++      
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999998877654443334444544445789999999999999888775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH-----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL-----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~-----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|+||||||......    ..+.+...+++|+.++.++++++.     +.+.++||++||..++.+.+.         
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  173 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG---------  173 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTT---------
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCC---------
Confidence             6899999999765431    123346789999999999999874     456679999999887765431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.||.+.+.+++.++.++   |++++.++||.+.++.....    ...........      ..
T Consensus       174 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~------p~  231 (267)
T 4iiu_A          174 ------------QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMI------PM  231 (267)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTC------TT
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcC------CC
Confidence                        5669999999888888776653   89999999999998865432    33333333332      34


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +.+.+++|+|+++++++....  ..| .++++|.
T Consensus       232 ~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          232 KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            568899999999999997643  244 5566654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.96  E-value=3.5e-27  Score=204.98  Aligned_cols=237  Identities=19%  Similarity=0.147  Sum_probs=158.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh----hccCCCeEEEEccCCChhhHHHHhc-
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL----EKASENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      |+|++|++|||||+|+||++++++|+++|++|+++.|+........++.+    ...+.++.++.+|++|.+++.++++ 
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            88889999999999999999999999999999999997433222222221    2224679999999999999998876 


Q ss_pred             ------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCc
Q 020924           76 ------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                            .+|+||||||......    ..+.+...+++|+.|+.++++++    ++.+.++||++||.++..+..      
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~------  154 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP------  154 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC------
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC------
Confidence                  6899999999654321    12234677899999999999999    455778999999987664321      


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGY  215 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~  215 (319)
                                    ...+.|+.||.+.+.+++.++.+   +|+++++|+||.+.++......   ...............
T Consensus       155 --------------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (324)
T 3u9l_A          155 --------------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPN  220 (324)
T ss_dssp             --------------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTT
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccc
Confidence                          01466999999999999988766   5899999999999865432110   111111111111111


Q ss_pred             cccCC--------cccccccHHHHHHHHHHhhccCCC--CceEEEecccCCH
Q 020924          216 ESLEN--------KLRMIVDVRDVAEALLLAYEKAEA--EGRYICTAHMIRA  257 (319)
Q Consensus       216 ~~~~~--------~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~~~~~s~  257 (319)
                      ...++        ...+..+++|+|++++.+++.+..  ...+.++......
T Consensus       221 ~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~  272 (324)
T 3u9l_A          221 AGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGA  272 (324)
T ss_dssp             TTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSH
T ss_pred             cCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHH
Confidence            11000        112236899999999999987743  2245666544553

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.96  E-value=9.8e-28  Score=205.82  Aligned_cols=222  Identities=15%  Similarity=0.107  Sum_probs=165.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+.........+.+...+.++.++.+|++|.++++++++       
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999987643333333333345688999999999999888775       


Q ss_pred             CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .+|++|||||......     ..+.+...+++|+.++.++++++.+.  ..++||++||..++.+.+.            
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  192 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET------------  192 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT------------
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC------------
Confidence            6899999999754321     22335778999999999999999876  3359999999887765431            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.||.+.+.+++.++.++   |++++.++||.++++.....  .........      ......+.+
T Consensus       193 ---------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~------~~~~p~~r~  255 (291)
T 3ijr_A          193 ---------LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS--FDEKKVSQF------GSNVPMQRP  255 (291)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH--SCHHHHHHT------TTTSTTSSC
T ss_pred             ---------ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc--CCHHHHHHH------HccCCCCCC
Confidence                     4669999999999999887654   89999999999998742110  001111111      112255678


Q ss_pred             ccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          226 VDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .+++|+|+++++++....  ..| .++++|.
T Consensus       256 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          256 GQPYELAPAYVYLASSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             BCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence            899999999999997643  244 5566653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.96  E-value=1.4e-27  Score=201.73  Aligned_cols=225  Identities=16%  Similarity=0.117  Sum_probs=162.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++       
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENV-DRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999976432 12223333334578899999999998888775       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      ++|+||||||.....     ...+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+           
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  159 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP-----------  159 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC-----------
Confidence            689999999964321     1122346788999999999998875    45678999999987665432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +...|+.||.+.+.+++.++.+   +|+++++++|+.+.++....... ...........      .+.+
T Consensus       160 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~------~~~~  222 (260)
T 2zat_A          160 ----------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKES------LRIR  222 (260)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHH------HTCS
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhc------CCCC
Confidence                      1567999999999999988765   38999999999998875321000 00000111111      1446


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCC
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIR  256 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s  256 (319)
                      ++++++|+|+++++++.....  .| .++++| ...|
T Consensus       223 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          223 RLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             SCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            789999999999999976432  34 677765 4443

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.96  E-value=3.4e-27  Score=199.17  Aligned_cols=227  Identities=19%  Similarity=0.186  Sum_probs=161.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|+++.++..........++...+.++.++.+|++|.++++++++      
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            36689999999999999999999999999999996665544444444444445678999999999999988775      


Q ss_pred             -CcceEEEecccCCCC-C----CCCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEecccccc-ccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPST-T----VPNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVAV-GLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~-~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~~-~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||..... .    ..+.+...+++|+.++.++++++.+...  ++||++||..++ .+.+           
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  153 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP-----------  153 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST-----------
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC-----------
Confidence             689999999865221 1    1122467899999999999999987643  389999998766 3222           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ....|+.||.+.+.+++.++.++  +++++.++||.+.++.......  ........      .....+.
T Consensus       154 ----------~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~------~~~p~~r  215 (259)
T 3edm_A          154 ----------GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVA------GATSLKR  215 (259)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------------C
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHH------hcCCCCC
Confidence                      15669999999999999887664  3999999999998875432210  01111111      1124567


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEecccCCH
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTAHMIRA  257 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~~~s~  257 (319)
                      +.+++|+|+++++++.....  .| .++++|....+
T Consensus       216 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          216 EGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             CcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCC
Confidence            88999999999999976532  44 56787754443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.6e-27  Score=202.30  Aligned_cols=228  Identities=15%  Similarity=0.075  Sum_probs=163.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++     
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEV-EEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            556789999999999999999999999999999999986532 22334444445678999999999999888775     


Q ss_pred             --CcceEEEecccCCC-C----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPS-T----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~-~----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||.... .    ...+.++..+++|+.++.++++++.    +.+.++||++||..++...+.        
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------  174 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT--------  174 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS--------
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC--------
Confidence              68999999997533 1    1122346789999999999999984    456679999999776542110        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---c
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---L  218 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~  218 (319)
                                 .+...|+.||.+.+.+++.++.+   +|++++.++||.+.++...........     ....+..   .
T Consensus       175 -----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~  238 (283)
T 3v8b_A          175 -----------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE-----ETAIPVEWPKG  238 (283)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH-----HHSCCCBCTTC
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch-----hhhhhhhhhhh
Confidence                       12567999999999999988776   489999999999998865432111110     0111111   0


Q ss_pred             CCcc--cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          219 ENKL--RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       219 ~~~~--~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ....  ..+..++|+|+++++++.....  .| .+.++|.
T Consensus       239 ~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          239 QVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             SCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            1122  5678999999999999975432  45 4566653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.96  E-value=1.4e-27  Score=203.54  Aligned_cols=224  Identities=17%  Similarity=0.166  Sum_probs=162.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++      
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL-RTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57789999999999999999999999999999999986432 12223333234578899999999999888775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC------CCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA------KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~------~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                       .+|+||||||......    ..+.+...+++|+.++.++++++.+.      +.++||++||..++.+.+         
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  168 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---------  168 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCT---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCC---------
Confidence             5899999999754321    11234678899999999999998765      557999999987665432         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc--c------HHHHHHHHhc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT--S------SLVLIKLLKE  213 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~--~------~~~~~~~~~~  213 (319)
                                  +...|+.+|.+.+.+++.++.+   .|+++++++||.++++........  .      ......... 
T Consensus       169 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  235 (277)
T 2rhc_B          169 ------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA-  235 (277)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH-
T ss_pred             ------------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh-
Confidence                        1466999999999999888765   489999999999988742110000  0      000011111 


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                           ..+.+.+++++|+|+++++++..+.  ..| .++++|.
T Consensus       236 -----~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          236 -----RVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             -----HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----cCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence                 1144678999999999999997643  234 5677654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.2e-27  Score=202.56  Aligned_cols=222  Identities=16%  Similarity=0.152  Sum_probs=152.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+..........++...+.++.++.+|++|.+++.++++       
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999999999755443333444444445689999999999999888776       


Q ss_pred             CcceEEEecccCC--CC----CCCCccchhhhhHHHHHHHHHHHHHhC----C---CCEEEEeccccccccCCCCCCCcc
Q 020924           76 GCNGVFHIACPAP--ST----TVPNPQMELLEPAVKGTLNVVKACLEA----K---VKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 ~~d~vi~~a~~~~--~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~---~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                      .+|+||||||...  ..    ...+.+...+++|+.++.++++++.+.    +   .++||++||..++.+.+.      
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~------  180 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE------  180 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C------
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC------
Confidence            6899999999732  11    122335778999999999999988654    2   459999999877665431      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.||.+.+.+++.++.+   +|++++.++||.+.++......   .........     ..
T Consensus       181 ---------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~~-----~~  237 (280)
T 4da9_A          181 ---------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS---GKYDGLIES-----GL  237 (280)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------
T ss_pred             ---------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc---hhHHHHHhh-----cC
Confidence                           466999999999999988765   5899999999999987643221   011011111     01


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      .+.+.+.+++|+|+++++++.....  .| .++++|.
T Consensus       238 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          238 VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             ----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            2456788999999999999986542  44 5667653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=2e-27  Score=204.03  Aligned_cols=230  Identities=16%  Similarity=0.068  Sum_probs=163.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Cc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   77 (319)
                      |++++|+|+||||+|+||++++++|+++|++|++++|+..+. .....++   +.+++++.+|++|.+++.++++   .+
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~i   87 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG-EAAARTM---AGQVEVRELDLQDLSSVRRFADGVSGA   87 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence            347789999999999999999999999999999999986532 1122222   3578999999999999999987   56


Q ss_pred             ceEEEecccCCCC--CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           78 NGVFHIACPAPST--TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        78 d~vi~~a~~~~~~--~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      |+||||||.....  ...+.++..+++|+.++.++++++.+...++||++||.+++.+...+  .....+..+.      
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~--~~~~~~~~~~------  159 (291)
T 3rd5_A           88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINL--EDLNWRSRRY------  159 (291)
T ss_dssp             EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCS--SCTTCSSSCC------
T ss_pred             CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCc--ccccccccCC------
Confidence            9999999976432  22344688999999999999999998877899999998877654321  1111121222      


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhC---C--ceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKT---G--LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRD  230 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  230 (319)
                      .+...|+.||.+.+.+++.+++++   +  ++++.++||.+.++.........    .......+     ..+-..+++|
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~  230 (291)
T 3rd5_A          160 SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL----GDALMSAA-----TRVVATDADF  230 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH----HHHHHHHH-----HHHHhCCHHH
Confidence            225779999999999998887653   5  99999999999887644321111    11111000     1222346999


Q ss_pred             HHHHHHHhhccCCCCceE-EEe
Q 020924          231 VAEALLLAYEKAEAEGRY-ICT  251 (319)
Q Consensus       231 ~a~~~~~~~~~~~~~~~~-~~~  251 (319)
                      +|+++++++..+...|.| .+.
T Consensus       231 ~A~~~~~l~~~~~~~G~~~~vd  252 (291)
T 3rd5_A          231 GARQTLYAASQDLPGDSFVGPR  252 (291)
T ss_dssp             HHHHHHHHHHSCCCTTCEEEET
T ss_pred             HHHHHHHHHcCCCCCCceeCCc
Confidence            999999999886556665 444

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.96  E-value=1.5e-27  Score=203.51  Aligned_cols=233  Identities=16%  Similarity=0.125  Sum_probs=166.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC----------hh-hHHHHHhhhccCCCeEEEEccCCChhhH
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS----------DE-KNARLYELEKASENLKLFKADLLDYDSV   70 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+..          .. .......+...+.++.++.+|++|.+++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            467899999999999999999999999999999998732          11 1122223333356899999999999999


Q ss_pred             HHHhc-------CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCC
Q 020924           71 KSAIV-------GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWP  138 (319)
Q Consensus        71 ~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~  138 (319)
                      .++++       .+|++|||||........+.+...+++|+.++.++++++.+.    + .++||++||.+++.+...  
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  167 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS--  167 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc--
Confidence            88876       689999999976544333446788999999999999998643    2 469999999877654310  


Q ss_pred             CCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHh-cC
Q 020924          139 KGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK-EG  214 (319)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~-~~  214 (319)
                                     +..+...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....  .....+..... ..
T Consensus       168 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~  230 (278)
T 3sx2_A          168 ---------------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATD  230 (278)
T ss_dssp             ---------------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC
T ss_pred             ---------------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhh
Confidence                           0011466999999999999988765   379999999999999865421  11112222111 11


Q ss_pred             cc-ccCC-cccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          215 YE-SLEN-KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       215 ~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .. ..+. ..+.+++++|+|+++++++....  ..| .++++|.
T Consensus       231 ~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          231 TPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             --CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            11 1222 22789999999999999997543  244 5666653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.96  E-value=6.7e-27  Score=199.38  Aligned_cols=219  Identities=16%  Similarity=0.113  Sum_probs=158.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc-CCChhhHHHHHhhhcc-CCCeEEEEccCCCh----hhHHHHhc-
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR-EPSDEKNARLYELEKA-SENLKLFKADLLDY----DSVKSAIV-   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~----~~~~~~~~-   75 (319)
                      |++|++|||||+|+||++++++|+++|++|++++| +... ......++... +.++.++.+|++|.    +++.++++ 
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA-AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            56789999999999999999999999999999999 5432 22222233222 35789999999999    88887765 


Q ss_pred             ------CcceEEEecccCCCCCC----C-----------CccchhhhhHHHHHHHHHHHHHhC---CC------CEEEEe
Q 020924           76 ------GCNGVFHIACPAPSTTV----P-----------NPQMELLEPAVKGTLNVVKACLEA---KV------KRVIVV  125 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~~~~----~-----------~~~~~~~~~Nv~~~~~l~~~~~~~---~~------~~iv~~  125 (319)
                            .+|+||||||.......    .           +.+...+++|+.++.++++++.+.   +.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  68999999997543211    1           334568999999999999999875   33      799999


Q ss_pred             ccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCc
Q 020924          126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNT  202 (319)
Q Consensus       126 SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~  202 (319)
                      ||..++.+.+                     +...|+.||.+.+.+++.++.++   |+++++++||.++++ ..    .
T Consensus       168 sS~~~~~~~~---------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~----~  221 (276)
T 1mxh_A          168 CDAMTDLPLP---------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA----M  221 (276)
T ss_dssp             CCGGGGSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS----S
T ss_pred             CchhhcCCCC---------------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc----C
Confidence            9987765432                     14669999999999998887653   899999999999998 21    1


Q ss_pred             cHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          203 SSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ............+     ..+++++++|+|+++++++.....  .| .++++|.
T Consensus       222 ~~~~~~~~~~~~p-----~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          222 PQETQEEYRRKVP-----LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             CHHHHHHHHTTCT-----TTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            2233233322211     123389999999999999975432  34 5666653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.96  E-value=2e-27  Score=200.09  Aligned_cols=223  Identities=15%  Similarity=0.110  Sum_probs=160.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCe-EEEEccCCChhhHHHHh-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENL-KLFKADLLDYDSVKSAI-----   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~-----   74 (319)
                      |+|++|+|+||||+|+||++++++|+++|++|++++|+.++.. ...+++   +.++ .++.+|++|.+++++++     
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALD-RAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh
Confidence            4567789999999999999999999999999999999754321 122222   2356 88999999999988876     


Q ss_pred             -cCcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           75 -VGCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        75 -~~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .++|+||||||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.         
T Consensus        83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  153 (254)
T 2wsb_A           83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP---------  153 (254)
T ss_dssp             HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS---------
T ss_pred             hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC---------
Confidence             368999999997543211    12235678899999888877764    446789999999876554321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                .+.+.|+.+|.+.|.+++.++.++   +++++++||+.++|+...... .............      ..
T Consensus       154 ----------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~  216 (254)
T 2wsb_A          154 ----------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-ERPELFETWLDMT------PM  216 (254)
T ss_dssp             ----------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-TCHHHHHHHHHTS------TT
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-cChHHHHHHHhcC------CC
Confidence                      113679999999999999887654   899999999999987532100 0012222222222      34


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +.+++++|+|++++.++....  ..| .++++|.
T Consensus       217 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          217 GRCGEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            568999999999999997542  234 5677654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.96  E-value=3.8e-27  Score=197.49  Aligned_cols=221  Identities=16%  Similarity=0.145  Sum_probs=160.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+++||||+|+||++++++|+++|++|++++|+.........+++...+.++.++.+|++|.+++.++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999999843222222223333334578899999999999988776       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ++|++|||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+.           
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  150 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG-----------  150 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC-----------
Confidence            6899999999754321    1223467899999998888777653    46689999999877664321           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.||.+.+.+.+.++.+   +|+++++++||.+.++.......   ..........      ....
T Consensus       151 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~------p~~~  211 (246)
T 2uvd_A          151 ----------QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE---NIKAEMLKLI------PAAQ  211 (246)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT---THHHHHHHTC------TTCS
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH---HHHHHHHhcC------CCCC
Confidence                      466999999999888877654   48999999999999876432211   1111222211      2346


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +++++|+|+++++++....  ..| .+.++|.
T Consensus       212 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          212 FGEAQDIANAVTFFASDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence            8999999999999997543  234 5566653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.96  E-value=8.5e-28  Score=203.60  Aligned_cols=222  Identities=14%  Similarity=0.137  Sum_probs=159.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ..||+++||||+|+||++++++|+++|++|++++|+.........+.....+.++.++.+|++|.+++.++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999999998876543332333333334578999999999999998876       


Q ss_pred             CcceEEEecccCC--CC----CCCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAP--ST----TVPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~--~~----~~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      .+|+||||||...  ..    ...+.+...+++|+.++.++++++    ++.+.++||++||.......+ +        
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~--------  155 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG-W--------  155 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC-C--------
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC-C--------
Confidence            6899999999422  11    112234677899999999999998    455678999999964331111 0        


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                .+...|+.||.+.+.+++.++.+   +|++++.++||.++++.....   .........      .....
T Consensus       156 ----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~------~~~p~  216 (264)
T 3i4f_A          156 ----------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEARQLKE------HNTPI  216 (264)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHHHC-------------
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHHHHHh------hcCCC
Confidence                      12567999999999999888765   589999999999999865432   111111111      11244


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ..+.+++|+|+++++++.....  .| .++++|
T Consensus       217 ~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          217 GRSGTGEDIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             -CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            5688999999999999986432  34 567765

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.96  E-value=6.7e-27  Score=198.49  Aligned_cols=223  Identities=15%  Similarity=0.112  Sum_probs=165.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..........++...+.++.++.+|++|.++++++++     
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999998776443333344444445688999999999999988776     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                        .+|++|||||......    ..+.+...+++|+.++.++++++.+.  ..++||++||..+.....            
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~------------  174 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW------------  174 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCS------------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCC------------
Confidence              6899999999754321    12335778999999999999999875  346999999965543210            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                              .+...|+.||.+.+.+++.++.++   |++++.++||.+.++.........    .......      ....
T Consensus       175 --------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~----~~~~~~~------~~~r  236 (271)
T 3v2g_A          175 --------PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA----EAQRERI------ATGS  236 (271)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH----HHHHHTC------TTSS
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH----HHHHhcC------CCCC
Confidence                    115679999999999998887653   899999999999998654322211    1222221      3445


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +.+++|+|+++++++....  ..| .++++|.
T Consensus       237 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          237 YGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence            7899999999999996543  244 5566653

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.96  E-value=4.5e-27  Score=198.08  Aligned_cols=224  Identities=14%  Similarity=0.110  Sum_probs=161.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.+..   ...++...+.++.++.+|++|.+++.++++      
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAP---ALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999987622   222332224568889999999999998886      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       ++|+||||||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+           
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  146 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST-----------  146 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC-----------
Confidence             7899999999754321    12234678999999887777766    455678999999987765432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHH---Hh--cCcc-c
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKL---LK--EGYE-S  217 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~---~~--~~~~-~  217 (319)
                                +...|+.+|.+.+.+.+.++.+   +|+++++++||.++++....   . .......   ..  .... .
T Consensus       147 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~-~~~~~~~~~~~~~~~~~~~~  212 (255)
T 2q2v_A          147 ----------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK---Q-IDDRAANGGDPLQAQHDLLA  212 (255)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH---H-HHHHHHHTCCHHHHHHHHHT
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh---h-cccccccccchHHHHHHHHh
Confidence                      1466999999999999988765   48999999999999875221   0 0000000   00  0000 1


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ...+.+.+++++|+|+++++++....  ..| .++++|.
T Consensus       213 ~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          213 EKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             TTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            11245679999999999999987543  234 5677653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.96  E-value=1.7e-27  Score=202.40  Aligned_cols=223  Identities=16%  Similarity=0.130  Sum_probs=164.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+..+......+.+...+.++.++.+|++|.+++.++++     
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            667889999999999999999999999999999999965543333333333345689999999999999888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+          
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  174 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM----------  174 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC----------
Confidence              6899999999765431    1223467889999999999888864    3667999999987766543          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.||.+.+.+++.++.+   .+++++.++||.+.++......   ......      .......
T Consensus       175 -----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~------~~~~~~~  234 (271)
T 4iin_A          175 -----------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK---DELKAD------YVKNIPL  234 (271)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------------CGGGCTT
T ss_pred             -----------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc---HHHHHH------HHhcCCc
Confidence                       1566999999999999988766   5899999999999887543211   111001      1111245


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ..+.+++|+|+++++++....  ..| .++++|.
T Consensus       235 ~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          235 NRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            678899999999999997643  244 5566653

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.5e-27  Score=202.07  Aligned_cols=226  Identities=17%  Similarity=0.082  Sum_probs=165.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++       
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNAL-AELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHH-HHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999886532 22333443345678999999999999888775       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEecccccc-ccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAV-GLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~-~~~~~~~~~~~~~E  145 (319)
                      .+|++|||||.....     ...+.+...+++|+.++.++++++.+.    +.++||++||..++ .+.+          
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  154 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFA----------  154 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCT----------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCC----------
Confidence            689999999965321     112335678999999999999988643    55699999997765 2221          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccccCCc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                 ....|+.||.+.+.+++.++.+   +|++++.++||.+.++...... .............      ..
T Consensus       155 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------~p  217 (280)
T 3tox_A          155 -----------GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGL------HA  217 (280)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTT------ST
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhcc------Cc
Confidence                       1567999999999999988766   3899999999999998643211 1112222222211      13


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIR  256 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s  256 (319)
                      .+.+.+++|+|+++++++.....  .| .++++| ..++
T Consensus       218 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  256 (280)
T 3tox_A          218 LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVT  256 (280)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence            45688999999999999976432  34 567765 4443

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=6.1e-27  Score=197.54  Aligned_cols=214  Identities=16%  Similarity=0.146  Sum_probs=155.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+..+. ...+..     .++.++.+|++|.+++.++++     
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS-VTELRQ-----AGAVALYGDFSCETGIMAFIDLLKTQ   96 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHH-HHHHHH-----HTCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHh-----cCCeEEECCCCCHHHHHHHHHHHHHh
Confidence            677889999999999999999999999999999999987753 222222     247889999999999988775     


Q ss_pred             --CcceEEEecccCCCCCCC---CccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTTVP---NPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~---~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|+||||||........   +.+...+++|+.++.++++++..    .+.++||++||..++.+.+.          
T Consensus        97 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  166 (260)
T 3gem_A           97 TSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK----------  166 (260)
T ss_dssp             CSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS----------
T ss_pred             cCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC----------
Confidence              589999999976443221   22356899999999999998864    35579999999877665431          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                 ...|+.||.+.+.+++.++.++  +++++.++||.+.++.....     ..........      ....
T Consensus       167 -----------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-----~~~~~~~~~~------p~~r  224 (260)
T 3gem_A          167 -----------HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-----AYRANALAKS------ALGI  224 (260)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------C------CSCC
T ss_pred             -----------cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-----HHHHHHHhcC------CCCC
Confidence                       4669999999999999887764  59999999999987743211     1111111111      3445


Q ss_pred             cccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      +..++|+|++++++++.....| .++++|
T Consensus       225 ~~~~edva~~v~~L~~~~~itG~~i~vdG  253 (260)
T 3gem_A          225 EPGAEVIYQSLRYLLDSTYVTGTTLTVNG  253 (260)
T ss_dssp             CCCTHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhhCCCCCCCEEEECC
Confidence            6789999999999996555555 567765

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.95  E-value=3.9e-27  Score=201.68  Aligned_cols=223  Identities=17%  Similarity=0.119  Sum_probs=161.7

Q ss_pred             CC-CCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MA-LEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~-~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |+ |++|+||||||+  |+||++++++|+++|++|++++|+..  ....++++....+++.++.+|++|.+++.++++  
T Consensus        16 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   93 (285)
T 2p91_A           16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK--LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFL   93 (285)
T ss_dssp             -CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG--GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHH
Confidence            44 677899999999  99999999999999999999999864  222233332222347889999999999888775  


Q ss_pred             -----CcceEEEecccCCC--------CCCCCccchhhhhHHHHHHHHHHHHHhCC---CCEEEEeccccccccCCCCCC
Q 020924           76 -----GCNGVFHIACPAPS--------TTVPNPQMELLEPAVKGTLNVVKACLEAK---VKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~---~~~iv~~SS~~~~~~~~~~~~  139 (319)
                           .+|+||||||....        ....+.+...+++|+.++.++++++.+..   .++||++||..++.+.+    
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----  169 (285)
T 2p91_A           94 EENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP----  169 (285)
T ss_dssp             HHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT----
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC----
Confidence                 57999999997542        11123346789999999999999998753   26999999977655432    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (319)
                                       +...|+.||.+.+.+++.++.+   +|+++++++||.++++...... .............  
T Consensus       170 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~--  229 (285)
T 2p91_A          170 -----------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-GFHLLMEHTTKVN--  229 (285)
T ss_dssp             -----------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-THHHHHHHHHHHS--
T ss_pred             -----------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-chHHHHHHHHhcC--
Confidence                             1456999999999999988765   4899999999999998643221 1122222222222  


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                          ....+.+++|+|+++++++.....  .| .++++|.
T Consensus       230 ----p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          230 ----PFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             ----TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence                234578999999999999975332  34 5666653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.95  E-value=6.7e-28  Score=204.65  Aligned_cols=223  Identities=10%  Similarity=0.073  Sum_probs=165.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.+.. ....+++...+.++.++.+|++|.+++.++++     
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRV-AQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHH-HHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999876532 23334444445678999999999999988876     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+.    +.++||++||..+..+.+          
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~----------  170 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA----------  170 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT----------
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC----------
Confidence              5899999999764321    12335678999999999998887653    567999999987765442          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.||.+.+.+++.++.+   +|++++.++||.+.++...... ....+........      ..
T Consensus       171 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~------p~  232 (271)
T 4ibo_A          171 -----------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKART------PA  232 (271)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHS------TT
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcC------CC
Confidence                       1566999999999999988765   5899999999999987532110 0011222222222      44


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +.+.+++|+|+++++++....  ..| .++++|
T Consensus       233 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          233 KRWGKPQELVGTAVFLSASASDYVNGQIIYVDG  265 (271)
T ss_dssp             CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCcEEEECC
Confidence            568899999999999987543  244 567765

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.95  E-value=4.1e-27  Score=198.79  Aligned_cols=212  Identities=17%  Similarity=0.147  Sum_probs=158.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+|+||||+|+||++++++|+++|++|++++|+.+... ....++.   .++.++.+|++|.+++.++++       
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK-AMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            67799999999999999999999999999999999864321 1222221   247889999999999998876       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ++|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+            
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  148 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV------------  148 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC------------
Confidence            7899999999754321    122346789999999977766654    45678999999987765432            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               +...|+.||.+.+.+++.++.+   +|++++++|||.++++... ...            .... ....+.
T Consensus       149 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~------------~~~~-~~~~~~  205 (260)
T 1nff_A          149 ---------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP------------EDIF-QTALGR  205 (260)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC------------TTCS-CCSSSS
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch------------hhHH-hCccCC
Confidence                     1456999999999999888765   5899999999999998643 100            0000 113456


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +++++|+|+++++++.....  .| .++++|.
T Consensus       206 ~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          206 AAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            88999999999999975432  34 5677653

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=4.6e-27  Score=197.43  Aligned_cols=219  Identities=16%  Similarity=0.115  Sum_probs=150.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+++||||+|+||++++++|+++|++|++++|+....           ..++.++.+|++|.+++.++++     
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----------QYPFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----------CCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----------cCCceEEEcCCCCHHHHHHHHHHHHHH
Confidence            778889999999999999999999999999999999986521           0137888999999999988876     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        ++|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+          
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------  141 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRI----------  141 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT----------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC----------
Confidence              6899999999754321    123356789999999999999984    44677999999987655332          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHH-HHHh-cCccccCC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLI-KLLK-EGYESLEN  220 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~-~~~~-~~~~~~~~  220 (319)
                                 +...|+.||.+.+.+++.++.+   +|+++++++|+.++++....... ...... .... ........
T Consensus       142 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  209 (250)
T 2fwm_X          142 -----------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDAEEQRIRGFGEQFKLGI  209 (250)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhHHHHHHhhhhhcccccC
Confidence                       1566999999999999988765   48999999999999886432100 000000 0000 00000011


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ....+.+++|+|+++++++....  ..| .+.++|
T Consensus       210 p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (250)
T 2fwm_X          210 PLGKIARPQEIANTILFLASDLASHITLQDIVVDG  244 (250)
T ss_dssp             ------CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            33458899999999999997643  244 556665

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=2.8e-27  Score=199.95  Aligned_cols=230  Identities=9%  Similarity=0.026  Sum_probs=159.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+.+... ...+++...  +.++.++.+|++|.+++.++++   
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLE-AAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            4467799999999999999999999999999999999764321 122222211  2278999999999999998876   


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         ++|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+         
T Consensus        82 ~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  152 (260)
T 2z1n_A           82 DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ---------  152 (260)
T ss_dssp             HTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             HhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC---------
Confidence               5899999999654321    122356789999999988777775    44678999999987665432         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccH---HHHHHHHhcCcccc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSS---LVLIKLLKEGYESL  218 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~---~~~~~~~~~~~~~~  218 (319)
                                  +...|+.||.+.+.+++.++.++   |+++++++||.++++..........   ..-..... .....
T Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~  219 (260)
T 2z1n_A          153 ------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEAL-KSMAS  219 (260)
T ss_dssp             ------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHH-HHHHh
Confidence                        14669999999999988876653   8999999999999986431100000   00000000 00001


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ......+.+++|+|+++++++....  ..| .++++|.
T Consensus       220 ~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          220 RIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            1134568899999999999997543  244 4566653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.95  E-value=3.1e-27  Score=200.16  Aligned_cols=220  Identities=16%  Similarity=0.116  Sum_probs=161.4

Q ss_pred             CCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+||||||+  |+||++++++|+++|++|++++|+..  ....++++........++.+|++|.+++.++++     
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK--LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT--THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHH--HHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            667899999999  99999999999999999999999863  222233332222345788999999999988775     


Q ss_pred             --CcceEEEecccCCC----C-----CCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPS----T-----TVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~----~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        .+|+||||||....    .     ...+.+...+++|+.++.++++++.+..  .++||++||..++.+.+.      
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------  158 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------  158 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT------
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC------
Confidence              57999999997542    1     1123346789999999999999998762  259999999776654321      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.||.+.+.+++.++.++   |+++++++||.++++..... ..............     
T Consensus       159 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~-----  217 (265)
T 1qsg_A          159 ---------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVT-----  217 (265)
T ss_dssp             ---------------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHS-----
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccHHHHHHHHhcC-----
Confidence                           4569999999999999887653   89999999999999864322 11122223332222     


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                       ....+.+++|+|+++++++.....  .| .++++|
T Consensus       218 -p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  252 (265)
T 1qsg_A          218 -PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  252 (265)
T ss_dssp             -TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECC
Confidence             234578999999999999975432  34 567765

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=2.5e-27  Score=200.38  Aligned_cols=224  Identities=16%  Similarity=0.111  Sum_probs=159.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+||||||+|+||++++++|+++|++|++++|+.........+++...+.++.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999933222222223333334568899999999999888776      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+          
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  153 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP----------  153 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC----------
Confidence             6899999999754321    11234678899999999998887653    4 57999999976654321          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.+|.+.+.+++.++.+   .+++++++||+.++++...... ............      ...
T Consensus       154 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~------~~~  215 (261)
T 1gee_A          154 -----------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESM------IPM  215 (261)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTT------CTT
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhc------CCC
Confidence                       2567999999999888887655   3899999999999988532100 001111111111      134


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +.+++++|+|+++++++....  ..| .++++|.
T Consensus       216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            568999999999999997532  234 5666653

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.2e-27  Score=201.52  Aligned_cols=219  Identities=16%  Similarity=0.150  Sum_probs=139.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+||||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.++++++++     
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA-EAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999999976532 22233333335678999999999999988776     


Q ss_pred             --CcceEEEecccCCC-------CCCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPS-------TTVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        .+|+||||||....       ....+.+...+++|+.++.++++++.    +.+.++||++||..++.+         
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  154 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY---------  154 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC---------
Confidence              68999999997321       11122346789999999777777664    446679999999776521         


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.||.+.+.+++.++.++   +++++.++||.++++......  ...+......+      
T Consensus       155 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~------  211 (253)
T 3qiv_A          155 ---------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVDDIVKG------  211 (253)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHHHHhcc------
Confidence                           3449999999999999888764   799999999999988643221  11111222221      


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      .....+.+++|+|+++++++.....  .| .|+++|
T Consensus       212 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          212 LPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             --------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred             CCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            1445677899999999999975432  34 566654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.95  E-value=2.5e-27  Score=200.76  Aligned_cols=229  Identities=15%  Similarity=0.135  Sum_probs=164.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |+|++|+||||||+|+||++++++|+++|++|++++|+...... .+.++.. .+.++.++.+|++|.++++++++    
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE-VTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH-HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHH-HHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            45778999999999999999999999999999999997654321 2222211 14578999999999999888765    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         .+|+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+.     . 
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~-  162 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----S-  162 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----E-
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc-----c-
Confidence               3799999999754321    11224567899999999999998654    3 479999999876654321     0 


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                        ..      +..+...|+.+|.+.+.+++.++.+   +|++++++||+.++++.....   ............      
T Consensus       163 --~~------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------  225 (265)
T 1h5q_A          163 --LN------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNI------  225 (265)
T ss_dssp             --TT------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC------
T ss_pred             --cc------ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcC------
Confidence              00      1123577999999999999988765   489999999999998864321   122222222211      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ..+.+++++|+|+++++++....  ..| .++++|.
T Consensus       226 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          226 PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             cccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            33568899999999999997643  234 6777653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=5.1e-27  Score=200.95  Aligned_cols=222  Identities=14%  Similarity=0.143  Sum_probs=160.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.|++|+|+||||||+||++++++|+++|++|++++|+.+.. ....+.+...+.++.++.+|++|.+++.++++     
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC-DSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHH-HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            346778999999999999999999999999999988765432 22223333334578999999999999988774     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        ++|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++++.+.         
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  189 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG---------  189 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT---------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC---------
Confidence              5899999999764321    1223467889999998888888763    46689999999877665421         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+++.++.+   .|+++++++|+.+.++....   .............      ..
T Consensus       190 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~------~~  248 (285)
T 2c07_A          190 ------------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK---ISEQIKKNIISNI------PA  248 (285)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------CCHHHHHHHHTTC------TT
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh---cCHHHHHHHHhhC------CC
Confidence                        466999999999998888765   38999999999999875432   1122222222211      23


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ..+++++|+|++++.++....  ..| .++++|.
T Consensus       249 ~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          249 GRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence            458999999999999997643  234 5666653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.95  E-value=2.8e-27  Score=198.18  Aligned_cols=219  Identities=16%  Similarity=0.180  Sum_probs=157.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-EcCCChhhHHHHHhhhccCCCeEE-EEccCCChhhHHHHhc-------
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGT-AREPSDEKNARLYELEKASENLKL-FKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~-------   75 (319)
                      ||+|+||||+|+||++++++|+++|++|+++ +|+.+.. .....++...+.++.. +.+|++|.++++++++       
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKA-EEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHH-HHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999998 6764432 1222223222345666 8999999999888764       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ++|+|||+||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++++.+.           
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  148 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG-----------  148 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC-----------
Confidence            6899999999754321    122346788999999666666554    457789999999877665421           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+++.++.++   +++++++||+.++++.....   ............      ..+.
T Consensus       149 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~  209 (245)
T 2ph3_A          149 ----------QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---PQEVKEAYLKQI------PAGR  209 (245)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHTC------TTCS
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---CHHHHHHHHhcC------CCCC
Confidence                      4669999999999988887653   89999999999998753321   122222222221      3456


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEeccc
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTAHM  254 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~  254 (319)
                      +++++|+|++++.++..+.  ..| .|++++..
T Consensus       210 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          210 FGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            8999999999999997643  234 56777643

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.95  E-value=5.5e-27  Score=196.82  Aligned_cols=221  Identities=14%  Similarity=0.106  Sum_probs=154.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+++||||+|+||++++++|+++|++|++++|+........+.   ..+.++.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR---NLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH---hcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            36779999999999999999999999999999999987322222222   224578999999999999888754      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+           
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  149 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE-----------  149 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------
Confidence             6899999999754321    12234678899999998888885    445678999999987765432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +...|+.||.+.+.+++.++.+   +|+++++++||.+.++.....  .... ....... ..   ....
T Consensus       150 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~-~~~~~~~-~~---~~~~  212 (249)
T 2ew8_A          150 ----------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS--ALSA-MFDVLPN-ML---QAIP  212 (249)
T ss_dssp             ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------C-TT---SSSC
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhc--cccc-hhhHHHH-hh---CccC
Confidence                      1466999999999999888765   489999999999998753311  0000 0000000 00   2345


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .+.+++|+|+++++++....  ..| .+.++|.
T Consensus       213 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          213 RLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence            68999999999999997532  234 4566653

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.95  E-value=3e-27  Score=198.64  Aligned_cols=212  Identities=13%  Similarity=0.097  Sum_probs=148.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++     
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL-APLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGG-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            346789999999999999999999999999999999986643 22333333335678999999999999998876     


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||......    ..+.+...+++|+.++.++++++..    .+.++||++||..++.+.+.          
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  151 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG----------  151 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT----------
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC----------
Confidence             5799999999765421    1223467899999999999998853    45679999999887665431          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceE-EEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDV-VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~-~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 ...|+.||.+.+.+.+.++.+   .|+++ ++++||.+.++......   ........      .....
T Consensus       152 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~---~~~~~~~~------~~~~~  211 (252)
T 3h7a_A          152 -----------FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR---EQMFGKDA------LANPD  211 (252)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc---hhhhhhhh------hcCCc
Confidence                       466999999999999888765   48999 89999999887543221   11100000      11133


Q ss_pred             cccccHHHHHHHHHHhhccCCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      + +++++|+|+++++++..+..
T Consensus       212 ~-~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          212 L-LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             ---CCHHHHHHHHHHHHHCCGG
T ss_pred             c-CCCHHHHHHHHHHHHhCchh
Confidence            4 89999999999999986654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.95  E-value=3e-27  Score=201.19  Aligned_cols=223  Identities=15%  Similarity=0.106  Sum_probs=165.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.++++++++     
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL-QVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999976542 22333444445678999999999999998876     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|+||||||......    ..+.++..+++|+.++.++++++.+.    + .++||++||.+++.+..         
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~---------  177 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI---------  177 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC---------
Confidence              6899999999765432    12234667789999999999998653    3 26899999987654321         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                +.+...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....    ...........      .
T Consensus       178 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~~------p  237 (276)
T 3r1i_A          178 ----------PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL----ADYHALWEPKI------P  237 (276)
T ss_dssp             ----------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG----GGGHHHHGGGS------T
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc----hHHHHHHHhcC------C
Confidence                      012467999999999999988766   589999999999998864322    11111111111      4


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ...+.+++|+|+++++++.....  .| .++++|.
T Consensus       238 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          238 LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            45688999999999999985432  44 5667654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=4.4e-27  Score=199.06  Aligned_cols=221  Identities=15%  Similarity=0.107  Sum_probs=159.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.... .....++   ..++.++.+|++|.+++.++++      
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAA-QAVVAGL---ENGGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTC---TTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            46678999999999999999999999999999999975432 1122222   1267889999999999988876      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+          
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  154 (263)
T 3ak4_A           85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP----------  154 (263)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC----------
Confidence             6899999999754321    12234678899999999999988753    4 57999999977654332          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc---c-----HHHHHHHHhcC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT---S-----SLVLIKLLKEG  214 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~---~-----~~~~~~~~~~~  214 (319)
                                 +...|+.||.+.+.+++.++.+   +|++++++||+.++++........   .     .........  
T Consensus       155 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--  221 (263)
T 3ak4_A          155 -----------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVS--  221 (263)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHH--
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHh--
Confidence                       1466999999999999888765   389999999999998742110000   0     001111111  


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                          ..+.+.+++++|+|+++++++....  ..| .++++|.
T Consensus       222 ----~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          222 ----LTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             ----TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ----cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence                1144678999999999999997642  234 5677653

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=5.3e-28  Score=209.90  Aligned_cols=232  Identities=16%  Similarity=0.175  Sum_probs=164.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh---hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE---KNARLYELEKASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |+ ++|+|+||||||+||++++++|+++|++|++++|+....   ....+..+.  ..+++++.+|++|.+++.++++++
T Consensus         1 M~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~   77 (313)
T 1qyd_A            1 MD-KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQV   77 (313)
T ss_dssp             -C-CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTC
T ss_pred             CC-CCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCC
Confidence            54 257899999999999999999999999999999986531   222222221  357899999999999999999999


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCcccccc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  156 (319)
                      |+|||+++....           ..|+.++.+++++|++.+ +++||+ |+ .  +...    ..+   +.+..|     
T Consensus        78 d~vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S~-~--g~~~----~~~---~~~~~p-----  130 (313)
T 1qyd_A           78 DVVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-SE-F--GMDP----DIM---EHALQP-----  130 (313)
T ss_dssp             SEEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-SC-C--SSCT----TSC---CCCCSS-----
T ss_pred             CEEEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-cC-C--cCCc----ccc---ccCCCC-----
Confidence            999999986432           126777899999999998 999986 43 2  2111    111   111111     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAE  233 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~  233 (319)
                      ....| .+|..+|.++++    .+++++++||+.++|+..........   .....++...   .|+..++|++++|+|+
T Consensus       131 ~~~~y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~  202 (313)
T 1qyd_A          131 GSITF-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGT  202 (313)
T ss_dssp             TTHHH-HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred             CcchH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHH
Confidence            13568 999999988864    58999999999988753221100000   0001122221   3457899999999999


Q ss_pred             HHHHhhccCCC-CceEEE-e-cccCCHHHHHHHHHHhCCC
Q 020924          234 ALLLAYEKAEA-EGRYIC-T-AHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       234 ~~~~~~~~~~~-~~~~~~-~-~~~~s~~e~~~~~~~~~g~  270 (319)
                      +++.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus       203 ~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  242 (313)
T 1qyd_A          203 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  242 (313)
T ss_dssp             HHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence            99999987654 345644 4 3789999999999999873

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=9.3e-27  Score=196.22  Aligned_cols=217  Identities=14%  Similarity=0.080  Sum_probs=158.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+.+.  .....++    .. .++.+|++|.++++++++     
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~----~~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAI----GG-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHH----TC-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHh----hC-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999998764  2222332    14 788999999998888765     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+          
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------  144 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ----------  144 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC----------
Confidence              57999999997643211    123467899999999999998864    4667999999987665432          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHH-hcCc---ccc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL-KEGY---ESL  218 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~---~~~  218 (319)
                                 +...|+.||.+.+.+++.++.+   +++++++++|+.+.++...       ..+.... ....   ...
T Consensus       145 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~~~~~~~~~~~~~~~~~~  206 (256)
T 2d1y_A          145 -----------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL-------EAIALSPDPERTRRDWED  206 (256)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------HHHC--------CHHHHT
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh-------hccccccCCHHHHHHHHh
Confidence                       1466999999999999888765   4899999999999876311       0000000 0000   001


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..+.+++++++|+|+++++++....  ..| .++++|
T Consensus       207 ~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~g  243 (256)
T 2d1y_A          207 LHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG  243 (256)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence            1245679999999999999997643  234 567765

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.95  E-value=6.9e-28  Score=196.67  Aligned_cols=194  Identities=18%  Similarity=0.095  Sum_probs=150.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---CcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~   82 (319)
                      |+|+||||+|+||++++++|+++  +|++++|+..... ....++    .. +++.+|++|.+++.++++   ++|+|||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~-~~~~~~----~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALA-ELAREV----GA-RALPADLADELEAKALLEEAGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHH-HHHHHH----TC-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHH-HHHHhc----cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence            57999999999999999999988  9999999754321 111222    12 788899999999999988   8999999


Q ss_pred             ecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           83 IACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        83 ~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      +||......    ..+.+...+++|+.++.++++++++.+.++||++||..++.+.+                     +.
T Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~  131 (207)
T 2yut_A           73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVP---------------------GF  131 (207)
T ss_dssp             CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSST---------------------TB
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCC---------------------Cc
Confidence            999754321    22345678999999999999999766778999999987765432                     25


Q ss_pred             chHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEAL  235 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  235 (319)
                      +.|+.+|.+.|.+++.++.+   +|++++++||+.++|+...               +    .+...+++++++|+|+++
T Consensus       132 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------~----~~~~~~~~~~~~dva~~~  192 (207)
T 2yut_A          132 AAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------P----LGGPPKGALSPEEAARKV  192 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------G----GTSCCTTCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------c----cCCCCCCCCCHHHHHHHH
Confidence            67999999999999988766   5899999999999987511               0    122457899999999999


Q ss_pred             HHhhccCCCCce
Q 020924          236 LLAYEKAEAEGR  247 (319)
Q Consensus       236 ~~~~~~~~~~~~  247 (319)
                      +.+++++....+
T Consensus       193 ~~~~~~~~~~~~  204 (207)
T 2yut_A          193 LEGLFREPVPAL  204 (207)
T ss_dssp             HHHHC--CCCSC
T ss_pred             HHHHhCCCCccc
Confidence            999987765443

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=1.6e-27  Score=201.80  Aligned_cols=223  Identities=17%  Similarity=0.173  Sum_probs=163.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++       
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL-EDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5679999999999999999999999999999999976532 22233333345689999999999999988775       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||.....     ...+.+...+++|+.++.++++++...   +.++||++||..++.+.+.           
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  156 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAK-----------  156 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTT-----------
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCc-----------
Confidence            579999999875321     112334678999999999999988643   1269999999877654431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC--------CccHHHHHHHHhcCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV--------NTSSLVLIKLLKEGYE  216 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~  216 (319)
                                ...|+.||.+.+.+++.++.+   +|++++.++||.++++......        ...........     
T Consensus       157 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----  221 (264)
T 3ucx_A          157 ----------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA-----  221 (264)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH-----
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh-----
Confidence                      466999999999999988765   5899999999999987432100        00011111111     


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                       .....+.+.+++|+|+++++++....  ..| .++++|.
T Consensus       222 -~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          222 -AGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             -TTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -ccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence             12256678999999999999997543  234 5677653

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.95  E-value=5.5e-27  Score=198.13  Aligned_cols=224  Identities=14%  Similarity=0.109  Sum_probs=158.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |++|+|+||||+|+||++++++|+++|++|++++|+..........++... +.++.++.+|++|.+++.++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999998653112222222211 3578899999999999888775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||......    ..+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+           
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  150 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA-----------  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCC-----------
Confidence             5899999999754321    1233467899999999999998864    3567999999987765432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCcc--------HHHHHHH-HhcC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTS--------SLVLIKL-LKEG  214 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~--------~~~~~~~-~~~~  214 (319)
                                +...|+.||.+.+.+++.++.+   +|++++.++||.+.++.........        ....... ..  
T Consensus       151 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  218 (260)
T 1x1t_A          151 ----------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE--  218 (260)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHH--
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhc--
Confidence                      1466999999999999888765   4899999999999988643211000        0000010 00  


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                          ..+.+.+.+++|+|+++++++....  ..| .++++|.
T Consensus       219 ----~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          219 ----KQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ----HCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----cCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence                1134568999999999999997542  234 5666653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.95  E-value=3e-27  Score=201.60  Aligned_cols=222  Identities=19%  Similarity=0.168  Sum_probs=161.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      ++|++|||||+|+||++++++|+++|++|++++|+.... ....+++...+.++.++.+|++|.+++.++++       .
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV-SAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999999999976532 22333443345689999999999999888765       5


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh------CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE------AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~------~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      +|+||||||......    ..+.+...+++|+.++.++++++.+      .+.++||++||..++.+.+.          
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~----------  171 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY----------  171 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC----------
Confidence            799999999765321    1223466788999999999999865      35679999999877654421          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC-------CC-ccHHHHHHHHhcCc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK-------VN-TSSLVLIKLLKEGY  215 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~-------~~-~~~~~~~~~~~~~~  215 (319)
                                 ...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....       .. ............  
T Consensus       172 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  238 (279)
T 3sju_A          172 -----------AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAK--  238 (279)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTT--
T ss_pred             -----------ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhc--
Confidence                       466999999999999888765   589999999999987642110       00 111111122111  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                          ...+.+.+++|+|+++++++....  ..| .++++|.
T Consensus       239 ----~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          239 ----IPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             ----CTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             ----CCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence                145678899999999999997643  244 5677654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=4.9e-27  Score=201.36  Aligned_cols=235  Identities=15%  Similarity=0.087  Sum_probs=165.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC----------hh-hHHHHHhhhccCCCeEEEEccCCChhhH
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS----------DE-KNARLYELEKASENLKLFKADLLDYDSV   70 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (319)
                      ++++|+||||||+|+||++++++|+++|++|++++|+..          .. .......+...+.++.++.+|++|.+++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            467899999999999999999999999999999998732          11 1112222333356889999999999999


Q ss_pred             HHHhc-------CcceEEEecccCCCC--CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCC
Q 020924           71 KSAIV-------GCNGVFHIACPAPST--TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        71 ~~~~~-------~~d~vi~~a~~~~~~--~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                      .++++       .+|+||||||.....  ...+.+...+++|+.++.++++++.+.  +..+||++||..++.+..    
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----  162 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA----  162 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH----
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc----
Confidence            88775       689999999976543  223345788999999999999999876  345999999988776542    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHH------
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKL------  210 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~------  210 (319)
                      ..+..|..+.      .+...|+.||.+.+.+++.++.++   |++++.++||.+.++.....     ......      
T Consensus       163 ~~~~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~~~  231 (287)
T 3pxx_A          163 QPPGAGGPQG------PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA-----PMYRQFRPDLEA  231 (287)
T ss_dssp             CCC-----CH------HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH-----HHHHHHCTTSSS
T ss_pred             ccccccccCC------CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-----chhhhhcccccc
Confidence            1222222211      125679999999999999887764   89999999999998865321     000000      


Q ss_pred             ------HhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          211 ------LKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       211 ------~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                            ..... ......+.+.+++|+|+++++++....  ..| .++++|
T Consensus       232 ~~~~~~~~~~~-~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          232 PSRADALLAFP-AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA  281 (287)
T ss_dssp             CCHHHHHHHGG-GGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             chhHHHHhhhh-hhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence                  00000 011122678999999999999997543  244 567765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=4.9e-27  Score=196.27  Aligned_cols=205  Identities=21%  Similarity=0.166  Sum_probs=157.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------Ccc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------GCN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d   78 (319)
                      +|+||||||||+||++++++|+++|++|++++|+.. .            ..+.++.+|++|.+++.++++      .+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence            479999999999999999999999999999999865 1            346889999999999998887      789


Q ss_pred             eEEEecccCCCCCCC----C----ccchhhhhHHHHHHHHHHHHHhCC----------CCEEEEeccccccccCCCCCCC
Q 020924           79 GVFHIACPAPSTTVP----N----PQMELLEPAVKGTLNVVKACLEAK----------VKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~----~----~~~~~~~~Nv~~~~~l~~~~~~~~----------~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                      +|||+||........    +    .+...+++|+.++.++++++.+..          .++||++||..++.+.+     
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  143 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-----  143 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-----
Confidence            999999975433111    1    346788999999999999997641          12999999987765432     


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                                      +...|+.+|.+.+.+++.++.+   .|++++++||+.++|+.....   ...+........   
T Consensus       144 ----------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~---  201 (242)
T 1uay_A          144 ----------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQV---  201 (242)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTC---
T ss_pred             ----------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhC---
Confidence                            1566999999999988887665   389999999999998754321   122222222222   


Q ss_pred             cCCcc-cccccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          218 LENKL-RMIVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       218 ~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                         .. ..+++++|+|+++++++......| .++++|
T Consensus       202 ---~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  235 (242)
T 1uay_A          202 ---PFPPRLGRPEEYAALVLHILENPMLNGEVVRLDG  235 (242)
T ss_dssp             ---CSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             ---CCcccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence               22 458899999999999998744445 567765

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.95  E-value=1e-26  Score=197.42  Aligned_cols=223  Identities=14%  Similarity=0.091  Sum_probs=163.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.........+++...+.++.++.+|++|.+++.++++       
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999988875543333344444445689999999999999988775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEeccccc-cccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVA-VGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~-~~~~~~~~~~~~~~E~~~  148 (319)
                      .+|++|||||......    ..+.+...+++|+.++.++++++.+...  ++||++||... ..+.+             
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  162 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVP-------------  162 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCT-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCC-------------
Confidence            5799999999764432    2233567899999999999999987643  49999999652 22211             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC--------CccH-HHHHHHHhcCcc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV--------NTSS-LVLIKLLKEGYE  216 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~--------~~~~-~~~~~~~~~~~~  216 (319)
                              +...|+.||.+.+.+++.++.+   +|++++.++||.+.++......        .... .........   
T Consensus       163 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  231 (270)
T 3is3_A          163 --------KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA---  231 (270)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH---
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc---
Confidence                    2567999999999999988765   4899999999999987532100        0011 111111111   


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                         .+.+.+.+++|+|+++++++....  ..| .++++|
T Consensus       232 ---~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          232 ---SPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             ---STTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ---CCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence               145668899999999999997543  244 456655

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=7.2e-27  Score=198.72  Aligned_cols=221  Identities=14%  Similarity=0.133  Sum_probs=155.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      ++|+||||||+|+||++++++|+++|++|+++.++...........+...+.++.++.+|++|.+++.++++       .
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            357899999999999999999999999998875444332233333333345678999999999999888775       5


Q ss_pred             cceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC-------CCCEEEEeccccccccCCCCCCCcccC
Q 020924           77 CNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA-------KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~-------~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                      +|+||||||......     ..+.+...+++|+.++.++++++.+.       +.++||++||.+++.+.+.        
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  176 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT--------  176 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT--------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC--------
Confidence            799999999765321     12334678999999999999998754       3458999999887765421        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  ....|+.||.+.+.+++.++.++   |++++.++||.+.++.....  ...........      ...
T Consensus       177 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~------~~~  236 (272)
T 4e3z_A          177 ------------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--GLPDRAREMAP------SVP  236 (272)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------CCT
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--CChHHHHHHhh------cCC
Confidence                        13569999999999988887654   89999999999998864321  11111111111      124


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...+.+++|+|+++++++.....  .| .++++|
T Consensus       237 ~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          237 MQRAGMPEEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence            45678899999999999975432  34 567765

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.95  E-value=4.2e-27  Score=199.63  Aligned_cols=219  Identities=17%  Similarity=0.171  Sum_probs=162.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.... ......+...+.++.++.+|++|.+++.++++       
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGA-EGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999976532 22223333334578899999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    ..+.++..+++|+.++.++++++.+    .+.++||++||.+++.+.+.           
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  173 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG-----------  173 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC-----------
Confidence            6899999999754321    1233567899999999999998863    35569999999887765431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....   ...........      ...+.
T Consensus       174 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~------~p~~r  234 (270)
T 3ftp_A          174 ----------QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---PQEQQTALKTQ------IPLGR  234 (270)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---CHHHHHHHHTT------CTTCS
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---CHHHHHHHHhc------CCCCC
Confidence                      566999999999988888765   489999999999987643211   11111122111      14567


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +.+++|+|+++++++....  ..| .++++|
T Consensus       235 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  265 (270)
T 3ftp_A          235 LGSPEDIAHAVAFLASPQAGYITGTTLHVNG  265 (270)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence            8899999999999996443  244 567765

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=3.6e-27  Score=202.78  Aligned_cols=241  Identities=12%  Similarity=0.088  Sum_probs=166.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCC---CeEEEEccCCChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASE---NLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.+... ....++...+.   ++.++.+|++|.+++.++++  
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE-ETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999765321 22222322223   68999999999999888775  


Q ss_pred             -----CcceEEEecccCCCCC------CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccC-CCCCC
Q 020924           76 -----GCNGVFHIACPAPSTT------VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLN-PRWPK  139 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~------~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~-~~~~~  139 (319)
                           .+|+||||||......      ..+.+...+++|+.++.++++++.+.    + ++||++||..++.+. +    
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~----  175 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHS----  175 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCT----
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCC----
Confidence                 6899999999654321      12234678999999999999988753    4 799999997765432 1    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccH-H-HHHHHHhcC
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSS-L-VLIKLLKEG  214 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~-~-~~~~~~~~~  214 (319)
                                       +...|+.||.+.+.+++.++.+   +|+++++++||.+.++.......... . .........
T Consensus       176 -----------------~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
T 1xhl_A          176 -----------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR  238 (297)
T ss_dssp             -----------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH
Confidence                             1466999999999998887654   58999999999999875321100000 0 000111100


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccC---CCCc-eEEEec-ccCCHHHHHHHHHH
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKA---EAEG-RYICTA-HMIRARDLVDKLKS  266 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~~~~~~-~~~s~~e~~~~~~~  266 (319)
                        ........+.+++|+|+++++++...   ...| .+.++| ....+.+.+..+.+
T Consensus       239 --~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          239 --KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             --TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             --HhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence              01113456899999999999999754   2344 566665 45555554444433

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=7.2e-27  Score=195.56  Aligned_cols=218  Identities=17%  Similarity=0.126  Sum_probs=158.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-EcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGT-AREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      +|+|+||||||+||++++++|+++|++|+++ .|+.... .....++...+.++.++.+|++|.++++++++       +
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAA-EEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999995 6654322 12222232224578899999999999988876       5


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|+|||+||......    ..+.+...+++|+.++.++++++.+.    +.++||++||..++++.+.            
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  147 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG------------  147 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT------------
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC------------
Confidence            899999999765321    11234668899999999999998763    6679999999877665421            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.+|.+.+.+++.++.+   .+++++++||+.++++.....   ............      ..+.+
T Consensus       148 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~~  209 (244)
T 1edo_A          148 ---------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTI------PLGRT  209 (244)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSC------TTCSC
T ss_pred             ---------CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcC------CCCCC
Confidence                     466999999999998888765   489999999999998753321   122222222111      34568


Q ss_pred             ccHHHHHHHHHHhhccCCC---Cc-eEEEecc
Q 020924          226 VDVRDVAEALLLAYEKAEA---EG-RYICTAH  253 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~---~~-~~~~~~~  253 (319)
                      ++++|+|+++++++..+..   .| .++++|.
T Consensus       210 ~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          210 GQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             BCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence            9999999999999844322   34 5666653

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.95  E-value=9.9e-27  Score=197.31  Aligned_cols=223  Identities=12%  Similarity=0.104  Sum_probs=158.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +|++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++...  +.++.++.+|++|.+++.++++    
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGL-EASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999986432 1222222221  3578899999999999988775    


Q ss_pred             ---CcceEEEecccCCC-C----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPS-T----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~-~----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         .+|+||||||.... .    ...+.++..+++|+.++.++++++.    +.+.++||++||..++.+.+        
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  160 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG--------  160 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS--------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCC--------
Confidence               57999999997543 1    1123356788999999887776664    44678999999987665432        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCC-----CCCccHHHHHHHHhcCc
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQS-----KVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~  215 (319)
                                   +...|+.||.+.+.+++.++.+   +|+++++++||.++++....     ...............  
T Consensus       161 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--  225 (267)
T 1iy8_A          161 -------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV--  225 (267)
T ss_dssp             -------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT--
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc--
Confidence                         1466999999999998887654   48999999999998874211     000001000011111  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                          ...+.+.+++|+|+++++++....  ..| .+.++|
T Consensus       226 ----~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG  261 (267)
T 1iy8_A          226 ----NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  261 (267)
T ss_dssp             ----CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ----CCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence                134568899999999999997542  244 456665

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.95  E-value=7.6e-27  Score=199.69  Aligned_cols=229  Identities=15%  Similarity=0.069  Sum_probs=164.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.........+.+...+.++.++.+|++|.+++.++++     
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999986532222233333334578999999999998887764     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+.  +.++||++||..++.+.+            
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------  172 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV------------  172 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC------------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC------------
Confidence              5899999999764321    12334678999999999999999876  567999999977654321            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC-------C-CccHHHHHHHHhcCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK-------V-NTSSLVLIKLLKEGYE  216 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~-------~-~~~~~~~~~~~~~~~~  216 (319)
                              .+...|+.||.+.+.+++.++.+   +|+++++++||.+.++.....       . ..............  
T Consensus       173 --------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  242 (283)
T 1g0o_A          173 --------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ--  242 (283)
T ss_dssp             --------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH--
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc--
Confidence                    01466999999999999888754   489999999999988642110       0 00111222222100  


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                        ......+.+++|+|+++++++....  ..| .+.++|.
T Consensus       243 --~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          243 --WSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             --SCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence              1134568899999999999997543  244 4566553

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=4.8e-27  Score=200.57  Aligned_cols=223  Identities=15%  Similarity=0.057  Sum_probs=159.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG----   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   76 (319)
                      |+|++|+||||||+|+||++++++|+++|++|++++|+...... ....+...+.++.++.+|++|.+++.++++.    
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK-AEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHH-HHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            56788999999999999999999999999999999998764321 1122222245789999999999999887764    


Q ss_pred             ---cceEEEecccCCC-CCC-----CCccchhhhhHHHHH----HHHHHHHHhCCCCEEEEeccccccccCCCCCCCccc
Q 020924           77 ---CNGVFHIACPAPS-TTV-----PNPQMELLEPAVKGT----LNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        77 ---~d~vi~~a~~~~~-~~~-----~~~~~~~~~~Nv~~~----~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         +|+|||+||.... ...     .+.+...+++|+.++    .++++.+++.+.++||++||..++.+..        
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  180 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI--------  180 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----------
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC--------
Confidence               8999999997644 111     122356789999994    5666666666778999999976554310        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                 ..+...|+.+|.+.|.+++.++.++   + ++++++|+.+.++.....   ............      
T Consensus       181 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------  239 (279)
T 3ctm_A          181 -----------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---SKDMKAKWWQLT------  239 (279)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---CHHHHHHHHHHS------
T ss_pred             -----------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---ChHHHHHHHHhC------
Confidence                       0124679999999999999887663   6 999999999998864321   122222222221      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ....+++++|+|+++++++....  ..| .++++|.
T Consensus       240 p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          240 PLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             TTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CccCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            33468999999999999997642  234 5667653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.95  E-value=6e-27  Score=198.25  Aligned_cols=219  Identities=16%  Similarity=0.176  Sum_probs=156.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..... ....++   +.++.++.+|++|.++++++++     
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK-EIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999998754321 122222   4578999999999999988775     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+          
T Consensus        99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----------  168 (266)
T 3grp_A           99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP----------  168 (266)
T ss_dssp             HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC----------
Confidence              68999999997643211    223567889999998777777653    4667999999987766542          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....   ............      +.
T Consensus       169 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~  228 (266)
T 3grp_A          169 -----------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMI------PM  228 (266)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTC------TT
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcC------CC
Confidence                       1466999999999988887765   489999999999988753321   122222222222      45


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +.+.+++|+|+++++++.....  .| .++++|.
T Consensus       229 ~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          229 KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            6788999999999999975432  34 5666653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.7e-26  Score=195.63  Aligned_cols=224  Identities=20%  Similarity=0.174  Sum_probs=159.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|++|||||+|+||++++++|+++|++|+++.++...........+...+.++.++.+|++|.++++++++     
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            445678999999999999999999999999999987665543333333444445678999999999999988775     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                        .+|++|||||.......    .+.++..+++|+.++.++++++.+..  .++||++||..+..+.+.           
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  171 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS-----------  171 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT-----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC-----------
Confidence              68999999997643321    12246678899999999999998652  358999999876654431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.||.+.+.+++.++.++   |++++.++||.+.++......  ...........      .+.+.
T Consensus       172 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~------~p~~r  233 (267)
T 3u5t_A          172 ----------YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK--SDEVRDRFAKL------APLER  233 (267)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTS------STTCS
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC--CHHHHHHHHhc------CCCCC
Confidence                      4669999999999999888764   899999999999887532210  01111111111      14567


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +.+++|+|+++++++.....  .| .+.++|.
T Consensus       234 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          234 LGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             CBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            88999999999999975432  45 4566553

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.95  E-value=4.6e-27  Score=199.13  Aligned_cols=222  Identities=17%  Similarity=0.178  Sum_probs=162.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+... ....++.. .+.++.++.+|++|.++++++++     
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD-AARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999765422 22222222 24679999999999999888765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||......    ..+.++..+++|+.++.++++++.+.    + .++||++||..++.+.+.        
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  167 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--------  167 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC--------
Confidence              6899999999765431    12234678899999999999998653    2 459999999877654321        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ...|+.||.+.+.+++.++.+   +|++++.++||.+.++....... ...........      .+
T Consensus       168 -------------~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~------~p  227 (266)
T 4egf_A          168 -------------HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIAR------IP  227 (266)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTT------CT
T ss_pred             -------------ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhc------CC
Confidence                         466999999999999888765   48999999999998864221100 01111222221      14


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ...+.+++|+|+++++++....  ..| .++++|
T Consensus       228 ~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          228 LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence            5668899999999999997643  244 566665

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1e-26  Score=197.95  Aligned_cols=222  Identities=14%  Similarity=0.062  Sum_probs=159.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++... .++.++.+|++|.++++++++     
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEAC-ADTATRLSAY-GDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHHHTTS-SCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhc-CceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            567789999999999999999999999999999999876432 2222333222 268889999999999888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCC----CEEEEeccccccccCCCCCCCc
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKV----KRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~----~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+    .+.    ++||++||..++.+.+.     
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~-----  177 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE-----  177 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC-----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC-----
Confidence              5899999999654321    1233467899999999888888753    344    79999999876654321     


Q ss_pred             ccCCCCCCCccccccCCc-hHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          142 IMDETCWSDKEYCRTTNN-WYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                                      .. .|+.||.+.+.+++.++.+   +|+++++++||.+.++.....   ............   
T Consensus       178 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~---  235 (276)
T 2b4q_A          178 ----------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI---ANDPQALEADSA---  235 (276)
T ss_dssp             ----------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH---HHCHHHHHHHHH---
T ss_pred             ----------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc---chhHHHHHHhhc---
Confidence                            23 5999999999999888765   489999999999988753210   000111111100   


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       ....+.+.+++|+|+++++++....  ..| .+.++|
T Consensus       236 -~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          236 -SIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             -TSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence             1134568899999999999997642  234 456655

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.95  E-value=2.1e-27  Score=193.06  Aligned_cols=186  Identities=18%  Similarity=0.166  Sum_probs=146.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC---cceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG---CNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~vi~   82 (319)
                      |+|+||||||+||++++++|+ +|++|++++|+..                  .+.+|++|.+++++++++   +|+|||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            489999999999999999999 9999999998753                  357899999999988875   899999


Q ss_pred             ecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           83 IACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        83 ~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      +||.......    .+.+...+++|+.++.++++++.+.   + ++||++||..++.+.+                    
T Consensus        65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~--------------------  123 (202)
T 3d7l_A           65 ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIV--------------------  123 (202)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCT--------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCC--------------------
Confidence            9996543211    1223567789999999999999876   4 6999999976554321                    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAE  233 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  233 (319)
                       +...|+.+|.+.|.+++.++.+.  +++++++||+.++|+..            ..  +.    +...+++++++|+|+
T Consensus       124 -~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~------------~~--~~----~~~~~~~~~~~dva~  184 (202)
T 3d7l_A          124 -QGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD------------KL--EP----FFEGFLPVPAAKVAR  184 (202)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH------------HH--GG----GSTTCCCBCHHHHHH
T ss_pred             -ccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh------------hh--hh----hccccCCCCHHHHHH
Confidence             14669999999999999988664  89999999999998742            01  10    114567999999999


Q ss_pred             HHHHhhccCCCCceEEE
Q 020924          234 ALLLAYEKAEAEGRYIC  250 (319)
Q Consensus       234 ~~~~~~~~~~~~~~~~~  250 (319)
                      +++.++.....+..|++
T Consensus       185 ~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          185 AFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHHHSCCCSCEEEE
T ss_pred             HHHHhhhccccCceEec
Confidence            99988854433446665

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=2.2e-26  Score=193.24  Aligned_cols=217  Identities=17%  Similarity=0.163  Sum_probs=156.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Ccce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   79 (319)
                      .++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+   ..++.++.+|+++.+++.++++   ++|+
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLK-SLGNAL---KDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            56799999999999999999999999999999999755321 112222   3578899999999999998887   5899


Q ss_pred             EEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           80 VFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        80 vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      ||||||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+                
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------  151 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP----------------  151 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS----------------
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC----------------
Confidence            99999975432    12344578899999999999988854    3567999999987765442                


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccH
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV  228 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  228 (319)
                           +...|+.||.+.+.+++.++.+   .|++++.++||.+.++.....   ..........+.      +.+.+.++
T Consensus       152 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~~~  217 (249)
T 3f9i_A          152 -----GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL---NEKQREAIVQKI------PLGTYGIP  217 (249)
T ss_dssp             -----CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C---CHHHHHHHHHHC------TTCSCBCH
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc---CHHHHHHHHhcC------CCCCCcCH
Confidence                 1566999999999998888765   489999999999998764322   222222222222      45678999


Q ss_pred             HHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          229 RDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +|+|+++++++.....  .| .++++|.
T Consensus       218 ~dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          218 EDVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            9999999999986532  34 5677654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=2e-26  Score=193.72  Aligned_cols=220  Identities=15%  Similarity=0.124  Sum_probs=158.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+|+||||+|+||++++++|+++|++|++++|+.... ......+.. ..+++++.+|++|.+++.++++      
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVG-EKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999999975432 112222221 2578999999999999888776      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCC-CEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKV-KRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~-~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|+||||||.......    .+.+...+++|+.++.++++++.    +.+. ++||++||..++.+.+          
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  150 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP----------  150 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC----------
Confidence             48999999997543211    12246788999998888777765    3455 7999999987665432          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhh-----hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGK-----KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-----~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                 +...|+.+|.+.+.+++.++.     ..+++++++||+.++++......   .......     .....
T Consensus       151 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~---~~~~~~~-----~~~~~  211 (251)
T 1zk4_A          151 -----------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP---GAEEAMS-----QRTKT  211 (251)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST---THHHHHT-----STTTC
T ss_pred             -----------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC---chhhhHH-----HhhcC
Confidence                       146699999999999887764     45899999999999987543211   0111110     11111


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..+.+++++|+|+++++++....  ..| .++++|
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          212 PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence            34568999999999999997643  234 567765

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=1.2e-26  Score=193.28  Aligned_cols=199  Identities=19%  Similarity=0.146  Sum_probs=137.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |+||+||||||||+||++++++|+++| ++|++++|+++....     +  ...+++++.+|++|.+++.++++++|+||
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv   93 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----P--YPTNSQIIMGDVLNHAALKQAMQGQDIVY   93 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----S--CCTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----c--ccCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence            567899999999999999999999999 999999998653211     1  13578999999999999999999999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      |+++...         .     ...+.++++++++.++++||++||..++.+.+.  ...+..|..+..      +...|
T Consensus        94 ~~a~~~~---------~-----~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~--~~~~~~~~~~~~------~~~~~  151 (236)
T 3qvo_A           94 ANLTGED---------L-----DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPG--KFVEWNNAVIGE------PLKPF  151 (236)
T ss_dssp             EECCSTT---------H-----HHHHHHHHHHHHHTTCCEEEEECCCCC------------------CG------GGHHH
T ss_pred             EcCCCCc---------h-----hHHHHHHHHHHHHcCCCEEEEEecceecCCCCc--ccccchhhcccc------hHHHH
Confidence            9997421         1     134678999999999999999999876654431  111222332211      13335


Q ss_pred             HhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC-cccccccHHHHHHHHHHhhc
Q 020924          162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN-KLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~  240 (319)
                      ..+    |..+.    ..++++++|||+.++++..... .             ....+. ....+++++|+|++++.++.
T Consensus       152 ~~~----~~~l~----~~gi~~~~vrPg~i~~~~~~~~-~-------------~~~~~~~~~~~~i~~~DvA~~i~~ll~  209 (236)
T 3qvo_A          152 RRA----ADAIE----ASGLEYTILRPAWLTDEDIIDY-E-------------LTSRNEPFKGTIVSRKSVAALITDIID  209 (236)
T ss_dssp             HHH----HHHHH----TSCSEEEEEEECEEECCSCCCC-E-------------EECTTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred             HHH----HHHHH----HCCCCEEEEeCCcccCCCCcce-E-------------EeccCCCCCCcEECHHHHHHHHHHHHc
Confidence            444    44432    4699999999999998753221 0             000111 22468999999999999999


Q ss_pred             cCC--CCceEEEec
Q 020924          241 KAE--AEGRYICTA  252 (319)
Q Consensus       241 ~~~--~~~~~~~~~  252 (319)
                      .+.  .+..|++++
T Consensus       210 ~~~~~~g~~~~i~~  223 (236)
T 3qvo_A          210 KPEKHIGENIGINQ  223 (236)
T ss_dssp             STTTTTTEEEEEEC
T ss_pred             CcccccCeeEEecC
Confidence            876  344677765

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=2.6e-26  Score=189.32  Aligned_cols=193  Identities=16%  Similarity=0.116  Sum_probs=142.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHH-HCCCeEEEEEcCCC-hhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLL-SRDYFVHGTAREPS-DEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +++||+|+||||||+||++++++|+ ++|++|++++|++. ...     ++.....+++++.+|++|.+++.++++++|+
T Consensus         2 ~~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (221)
T 3r6d_A            2 NAMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIP-----PEIIDHERVTVIEGSFQNPGXLEQAVTNAEV   76 (221)
T ss_dssp             CCSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSC-----HHHHTSTTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccch-----hhccCCCceEEEECCCCCHHHHHHHHcCCCE
Confidence            3445679999999999999999999 89999999999754 221     1111246899999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      |||+||..               |+. +.++++++++.++++||++||..++.+.+.     ...+..      .....+
T Consensus        77 vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~-----~~~~~~------~~~~~~  129 (221)
T 3r6d_A           77 VFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV-----ALEKWT------FDNLPI  129 (221)
T ss_dssp             EEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH-----HHHHHH------HHTSCH
T ss_pred             EEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc-----cccccc------cccccc
Confidence            99999742               445 899999999999999999999776553321     000000      000112


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC-cccccccHHHHHHHHHHh
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN-KLRMIVDVRDVAEALLLA  238 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~  238 (319)
                      .|+.+|..+|..++.    .+++++++||+.++++........             ...+. ....+++++|+|++++++
T Consensus       130 ~y~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~-------------~~~~~~~~~~~~~~~dvA~~~~~l  192 (221)
T 3r6d_A          130 SYVQGERQARNVLRE----SNLNYTILRLTWLYNDPEXTDYEL-------------IPEGAQFNDAQVSREAVVKAIFDI  192 (221)
T ss_dssp             HHHHHHHHHHHHHHH----SCSEEEEEEECEEECCTTCCCCEE-------------ECTTSCCCCCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh----CCCCEEEEechhhcCCCCCcceee-------------ccCCccCCCceeeHHHHHHHHHHH
Confidence            699999999988764    589999999999998732211100             00111 223489999999999999


Q ss_pred             h--ccCC
Q 020924          239 Y--EKAE  243 (319)
Q Consensus       239 ~--~~~~  243 (319)
                      +  ..+.
T Consensus       193 ~~~~~~~  199 (221)
T 3r6d_A          193 LHAADET  199 (221)
T ss_dssp             HTCSCCG
T ss_pred             HHhcChh
Confidence            9  7654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=6.7e-27  Score=199.32  Aligned_cols=222  Identities=11%  Similarity=0.121  Sum_probs=162.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-ccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-KASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+... ....++. ..+.++.++.+|++|.++++++++      
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVL-TAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999865422 2222221 124578999999999999888775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||......    ..+.+...+++|+.++.++++++..    .+.++||++||..++.+.+.          
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  173 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL----------  173 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT----------
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC----------
Confidence             6899999999654321    1233567899999999999999854    34569999999887765431          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.||.+.+.+++.++.+   +|++++.++||.+.++....................      ..+
T Consensus       174 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------p~~  236 (277)
T 4fc7_A          174 -----------QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS------PLQ  236 (277)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTS------TTS
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccC------CCC
Confidence                       466999999999999888765   389999999999988631100001122222222222      445


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+.+++|+|+++++++....  ..| .++++|
T Consensus       237 r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          237 RLGNKTEIAHSVLYLASPLASYVTGAVLVADG  268 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHcCCccCCcCCCEEEECC
Confidence            68899999999999997543  244 566665

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.95  E-value=1.7e-26  Score=196.73  Aligned_cols=223  Identities=14%  Similarity=0.079  Sum_probs=162.1

Q ss_pred             CC-CCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MA-LEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~-~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |+ |++|+|+||||+  |+||++++++|+++|++|++++|+..  ....++++.....++.++.+|++|.+++.++++  
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES--LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT--THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHH
Confidence            65 778999999999  99999999999999999999999875  222223332212347889999999999888775  


Q ss_pred             -----CcceEEEecccCCC--------CCCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCC
Q 020924           76 -----GCNGVFHIACPAPS--------TTVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                           .+|+||||||....        ....+.+...+++|+.++.++++++.+..  .++||++||..++.+.+     
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  153 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA-----  153 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred             HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCC-----
Confidence                 57999999997542        11123346789999999999999998762  25999999977655432     


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                                      +...|+.||.+.+.+++.++.++   |++++.++||.+.++...... .............   
T Consensus       154 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~---  213 (275)
T 2pd4_A          154 ----------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINA---  213 (275)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHS---
T ss_pred             ----------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-ccHHHHHHHHhcC---
Confidence                            14569999999999999887654   899999999999988643221 1122222222222   


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                         ....+.+++|+|+++++++....  ..| .+.+.|.
T Consensus       214 ---p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          214 ---PLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             ---TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence               23457799999999999997532  244 4566653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=9.2e-27  Score=195.48  Aligned_cols=212  Identities=17%  Similarity=0.176  Sum_probs=152.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+|+||||+|+||++++++|+++|  ++|++++|+....  ..+.++  .+.++.++.+|++|.+++.++++     
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~--~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH--HHHHhc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999  9999999986532  233332  24578999999999999988876     


Q ss_pred             ----CcceEEEecccCC-CCC----CCCccchhhhhHHHHHHHHHHHHHhC----------C-----CCEEEEecccccc
Q 020924           76 ----GCNGVFHIACPAP-STT----VPNPQMELLEPAVKGTLNVVKACLEA----------K-----VKRVIVVSSGVAV  131 (319)
Q Consensus        76 ----~~d~vi~~a~~~~-~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----------~-----~~~iv~~SS~~~~  131 (319)
                          ++|+||||||... ...    ..+.+...+++|+.++.++++++.+.          +     .++||++||..++
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence                7999999999765 211    11224678899999999999988653          4     6799999998766


Q ss_pred             ccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHH
Q 020924          132 GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLI  208 (319)
Q Consensus       132 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~  208 (319)
                      .+.+.        +..+      ..+...|+.+|.+.+.+++.++.++   ++++++++|+.+.++....          
T Consensus       157 ~~~~~--------~~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------  212 (250)
T 1yo6_A          157 ITDNT--------SGSA------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------  212 (250)
T ss_dssp             STTCC--------STTS------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------
T ss_pred             cCCcc--------cccc------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------
Confidence            54321        0111      1225679999999999999887764   8999999999998775321          


Q ss_pred             HHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCceEE-EecccCC
Q 020924          209 KLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEGRYI-CTAHMIR  256 (319)
Q Consensus       209 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~-~~~~~~s  256 (319)
                                    ..+++++|+|+.++.++....  ..|.|+ +.+..++
T Consensus       213 --------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          213 --------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             --------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             --------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence                          135799999999999998754  355554 3444443

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.95  E-value=3e-26  Score=195.11  Aligned_cols=221  Identities=15%  Similarity=0.146  Sum_probs=161.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.+... ....++   +.++.++.+|++|.++++++++     
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV-RVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            6778899999999999999999999999999999999765321 122222   3578999999999999888775     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||.......    .+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+          
T Consensus        99 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  168 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA----------  168 (277)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT----------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC----------
Confidence              68999999997543221    223466788999999999998864    3456999999987765432          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccccC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~  219 (319)
                                 +...|+.||.+.+.+++.++.++   |++++.++||.+.++.....   .............      .
T Consensus       169 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~  231 (277)
T 4dqx_A          169 -----------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNA------R  231 (277)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHT------T
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHh------c
Confidence                       15679999999999998887653   89999999999987641100   0000111111111      1


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...+.+.+++|+|+++++++.....  .| .++++|
T Consensus       232 ~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  267 (277)
T 4dqx_A          232 AVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDG  267 (277)
T ss_dssp             STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence            2456788999999999999976432  34 567765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.95  E-value=2.2e-26  Score=195.05  Aligned_cols=221  Identities=14%  Similarity=0.104  Sum_probs=159.0

Q ss_pred             CCCCCeEEEeCcch-HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAGG-FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      ++++|++|||||+| .||++++++|+++|++|++++|+.... ....+++... ..++.++.+|++|.++++++++    
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRL-GETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHH-HHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            36789999999997 699999999999999999999986542 2223333222 3579999999999999988775    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         .+|+||||||......    ..+.+...+++|+.++.++++++...     +.++||++||..++.+.+        
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  169 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH--------  169 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT--------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC--------
Confidence               5799999999754422    12234678899999999999998754     456899999987665432        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   +...|+.+|.+.+.+++.++.+   +|++++.++||.+.++......  .........      ...
T Consensus       170 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~------~~~  228 (266)
T 3o38_A          170 -------------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS--SSELLDRLA------SDE  228 (266)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------------CC
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC--cHHHHHHHH------hcC
Confidence                         1567999999999999988765   5899999999999887543211  011111111      122


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..+.+.+++|+|+++++++....  ..| .++++|
T Consensus       229 ~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          229 AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence            45678899999999999997643  244 456655

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=9.4e-27  Score=196.84  Aligned_cols=225  Identities=18%  Similarity=0.146  Sum_probs=155.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..... ....++   ..++.++.+|++|.++++++++     
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAE-RVAGEI---GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            7788999999999999999999999999999999999865321 112222   3578999999999999888775     


Q ss_pred             --CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhCC--------CCEEEEeccccccccCCCCCCC
Q 020924           76 --GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEAK--------VKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~~--------~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                        .+|+||||||......     ..+.+...+++|+.++.++++++.+..        ..+||++||..++.+.+     
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----  155 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP-----  155 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT-----
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC-----
Confidence              5799999999764221     122346678999999999999886431        34799999987665432     


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc-cHHHHHHHHhcCcc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT-SSLVLIKLLKEGYE  216 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~  216 (319)
                                      ....|+.+|.+.+.+++.++.+   ++++++.++|+.+.++........ .........     
T Consensus       156 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-----  214 (261)
T 3n74_A          156 ----------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFR-----  214 (261)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------
T ss_pred             ----------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHh-----
Confidence                            1466999999999999888765   589999999999998764322100 000111111     


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec-ccCC
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA-HMIR  256 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s  256 (319)
                       ...+...+++++|+|+++++++....  ..| .++++| ..++
T Consensus       215 -~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          215 -DSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             ---CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred             -hcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence             11245678999999999999997543  244 567765 4443

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.95  E-value=2.3e-27  Score=200.08  Aligned_cols=216  Identities=20%  Similarity=0.145  Sum_probs=156.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..+.    ...+   ..++.++.+|++|.+++.++++     
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV----VADL---GDRARFAAADVTDEAAVASALDLAETM   77 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH----HHHT---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH----HHhc---CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            677889999999999999999999999999999999954321    1222   3578999999999999988876     


Q ss_pred             -CcceEEEecccCCCC--------CCCCccchhhhhHHHHHHHHHHHHHhC------------CCCEEEEeccccccccC
Q 020924           76 -GCNGVFHIACPAPST--------TVPNPQMELLEPAVKGTLNVVKACLEA------------KVKRVIVVSSGVAVGLN  134 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~--------~~~~~~~~~~~~Nv~~~~~l~~~~~~~------------~~~~iv~~SS~~~~~~~  134 (319)
                       .+|++|||||.....        ...+.++..+++|+.++.++++++.+.            +..+||++||..++.+.
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence             789999999964311        122345788999999999999999753            23489999998766543


Q ss_pred             CCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHH
Q 020924          135 PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL  211 (319)
Q Consensus       135 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~  211 (319)
                      +                     +...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....   .........
T Consensus       158 ~---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~  213 (257)
T 3tl3_A          158 I---------------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLG  213 (257)
T ss_dssp             H---------------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHH
T ss_pred             C---------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHH
Confidence            2                     1456999999999888887665   489999999999998764322   222222222


Q ss_pred             hcCccccCCcccccccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          212 KEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       212 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      ...+     ....+.+++|+|+++++++..+...| .+.++|
T Consensus       214 ~~~~-----~~~r~~~p~dva~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tl3_A          214 KQVP-----HPSRLGNPDEYGALAVHIIENPMLNGEVIRLDG  250 (257)
T ss_dssp             HTSS-----SSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             hcCC-----CCCCccCHHHHHHHHHHHhcCCCCCCCEEEECC
Confidence            2221     11568899999999999998755556 456665

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=1.6e-27  Score=207.39  Aligned_cols=218  Identities=14%  Similarity=0.108  Sum_probs=158.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      ++|+||||||+||++++++|+++|++|++++|+... ....+..+.  ..+++++.+|++|.+++.++++++|+|||+++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~   88 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS-KTTLLDEFQ--SLGAIIVKGELDEHEKLVELMKKVDVVISALA   88 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCS-CHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCc-hhhHHHHhh--cCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            589999999999999999999999999999998752 122222221  24789999999999999999999999999997


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhh
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS  164 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  164 (319)
                      ...               +.++.+++++|++.+ +++||+ |+   ++..        .+|..+..|     ....| .+
T Consensus        89 ~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~--------~~~~~~~~p-----~~~~y-~s  135 (318)
T 2r6j_A           89 FPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE--------EDRINALPP-----FEALI-ER  135 (318)
T ss_dssp             GGG---------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC--------TTTCCCCHH-----HHHHH-HH
T ss_pred             hhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC--------cccccCCCC-----cchhH-HH
Confidence            531               334788999999998 999985 43   2211        122222111     13458 99


Q ss_pred             HHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhhcc
Q 020924          165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       165 K~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      |..+|.++++    .+++++++||+.+++..       ...++.....+....   .++..++|++++|+|++++.++..
T Consensus       136 K~~~e~~~~~----~~~~~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (318)
T 2r6j_A          136 KRMIRRAIEE----ANIPYTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATD  204 (318)
T ss_dssp             HHHHHHHHHH----TTCCBEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHh----cCCCeEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcC
Confidence            9999988865    58999999999887541       111111111222222   345789999999999999999987


Q ss_pred             CCC-CceEEE-e-cccCCHHHHHHHHHHhCCC
Q 020924          242 AEA-EGRYIC-T-AHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       242 ~~~-~~~~~~-~-~~~~s~~e~~~~~~~~~g~  270 (319)
                      +.. ++.|++ + +..+|+.|+++.+.+.+|.
T Consensus       205 ~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  236 (318)
T 2r6j_A          205 PRALNRVVIYRPSTNIITQLELISRWEKKIGK  236 (318)
T ss_dssp             GGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             ccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence            654 345544 3 4789999999999999883

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.95  E-value=2.4e-27  Score=203.68  Aligned_cols=223  Identities=13%  Similarity=0.077  Sum_probs=162.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHH-HhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARL-YELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+........+ ..+...+.++.++.+|++|.++++++++     
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999887443222222 2222335678999999999998887764     


Q ss_pred             --CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|++|||||......     ..+.+...+++|+.++.++++++.+...  .+||++||..++.+.+.          
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------  195 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH----------  195 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT----------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC----------
Confidence              6899999999754211     1233577899999999999999987643  49999999887664431          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.||.+.+.+++.++.++   |++++.++||.++++...... ......      ..........
T Consensus       196 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~~~------~~~~~~~p~~  257 (294)
T 3r3s_A          196 -----------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKI------PQFGQQTPMK  257 (294)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT-SCGGGS------TTTTTTSTTS
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC-CCHHHH------HHHHhcCCCC
Confidence                       5669999999999999887654   899999999999986421110 000000      0001122556


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      .+.+++|+|+++++++.....  .| .++++|
T Consensus       258 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  289 (294)
T 3r3s_A          258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            788999999999999975432  34 567765

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=2.1e-26  Score=198.06  Aligned_cols=222  Identities=15%  Similarity=0.054  Sum_probs=163.9

Q ss_pred             CCCCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |+|++|++|||||+|  +||++++++|+++|++|++++|+...  ...+.++.....++.++.+|++|.++++++++   
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETF--KKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            456789999999997  99999999999999999999998542  22222222222457889999999999988875   


Q ss_pred             ----CcceEEEecccCCC--------CCCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCc
Q 020924           76 ----GCNGVFHIACPAPS--------TTVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                          .+|++|||||....        ....+.+...+++|+.++.++++++....  .++||++||..++.+.+.     
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~-----  178 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH-----  178 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-----
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC-----
Confidence                57999999997642        11223357789999999999999998753  349999999877654431     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                      ...|+.||.+.+.+++.++.+   +|++++.++||.+.++...... .............    
T Consensus       179 ----------------~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----  237 (296)
T 3k31_A          179 ----------------YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS-DFHYILTWNKYNS----  237 (296)
T ss_dssp             ----------------TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH-HHHHHHHHHHHHS----
T ss_pred             ----------------chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc-chHHHHHHHHhcC----
Confidence                            456999999999999988765   4899999999999988643321 1111222222222    


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                        ....+..++|+|+++++++....  ..| .++++|
T Consensus       238 --p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  272 (296)
T 3k31_A          238 --PLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDC  272 (296)
T ss_dssp             --TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             --CCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECC
Confidence              34567899999999999998543  244 567765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-27  Score=205.52  Aligned_cols=226  Identities=17%  Similarity=0.204  Sum_probs=161.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh----hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE----KNARLYELEKASENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      |+ .||+|+||||||+||++++++|+++|++|++++|+....    ....+..+.  ..+++++.+|++|.+++.+++++
T Consensus         1 M~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~   77 (308)
T 1qyc_A            1 MG-SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKN   77 (308)
T ss_dssp             -C-CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHT
T ss_pred             CC-CCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcC
Confidence            54 257899999999999999999999999999999986432    112222221  35789999999999999999999


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccc
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR  155 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  155 (319)
                      +|+|||+++...               +.++.+++++|++.+ +++||+ |+ .  +..        .+|..+..|    
T Consensus        78 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~--g~~--------~~~~~~~~p----  126 (308)
T 1qyc_A           78 VDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE-F--GND--------VDNVHAVEP----  126 (308)
T ss_dssp             CSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC-C--SSC--------TTSCCCCTT----
T ss_pred             CCEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc-c--ccC--------ccccccCCc----
Confidence            999999997531               334678999999998 999984 44 2  211        112222222    


Q ss_pred             cCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHH
Q 020924          156 TTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVA  232 (319)
Q Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a  232 (319)
                       ..+.| .+|..+|.++++    .+++++++||+.++|..........    .....+....   .++..++|++++|+|
T Consensus       127 -~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (308)
T 1qyc_A          127 -AKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIG  196 (308)
T ss_dssp             -HHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHH
T ss_pred             -chhHH-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHH
Confidence             13568 999999988865    4899999999999875322111000    0000111111   345789999999999


Q ss_pred             HHHHHhhccCCCC-ceEEE-e-cccCCHHHHHHHHHHhCCC
Q 020924          233 EALLLAYEKAEAE-GRYIC-T-AHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       233 ~~~~~~~~~~~~~-~~~~~-~-~~~~s~~e~~~~~~~~~g~  270 (319)
                      ++++.++.++... +.|++ + +..+|+.|+++.+.+.+|.
T Consensus       197 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          197 TFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  237 (308)
T ss_dssp             HHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             HHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence            9999999876543 35554 3 4789999999999999984

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.95  E-value=3.2e-26  Score=193.78  Aligned_cols=207  Identities=21%  Similarity=0.213  Sum_probs=155.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+.     ++...  ..++.++.+|++|.+++.++++       
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-----LKALN--LPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH-----HHTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHhh--cCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            457899999999999999999999999999999997542     12221  2478899999999999888775       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||.......    .+.++..+++|+.++.++++++.    +.+.++||++||.+++.+.+.           
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~-----------  155 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD-----------  155 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC-----------
Confidence            68999999997644321    12345678999999999888775    446779999999877654431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.||.+.+.+.+.++.+   +|++++.++||.+.++.......  ....... ....    .....
T Consensus       156 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~-~~~~----~~~~r  218 (266)
T 3p19_A          156 ----------HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS--QQIKDGY-DAWR----VDMGG  218 (266)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC--HHHHHHH-HHHH----HHTTC
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc--hhhhHHH-Hhhc----ccccC
Confidence                      466999999999998888765   48999999999999886433211  1111111 1100    03456


Q ss_pred             cccHHHHHHHHHHhhccCCC
Q 020924          225 IVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~  244 (319)
                      +++++|+|+++++++..+..
T Consensus       219 ~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          219 VLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             CBCHHHHHHHHHHHHHSCTT
T ss_pred             CCCHHHHHHHHHHHHcCCCC
Confidence            88999999999999998765

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=1.3e-26  Score=196.13  Aligned_cols=212  Identities=15%  Similarity=0.144  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+||||||+|+||++++++|+++|++|++++|+...            ..++.++.+|++|.+++.++++       
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999999998653            2467889999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++++.+.    +.++||++||..++.+.+            
T Consensus        74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  141 (264)
T 2dtx_A           74 SISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK------------  141 (264)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC------------
Confidence            5899999999754321    12235678999999999999988753    567999999987665432            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhCC--ceEEEEecCcccCCCCCCCCC----ccH----HHHHHHHhcCccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG--LDVVTICPNLVLGPLLQSKVN----TSS----LVLIKLLKEGYES  217 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~lrp~~v~G~~~~~~~~----~~~----~~~~~~~~~~~~~  217 (319)
                               +...|+.||.+.+.+++.++.+++  +++++++||.+.++.......    ...    .........    
T Consensus       142 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  208 (264)
T 2dtx_A          142 ---------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE----  208 (264)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHH----
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhc----
Confidence                     156799999999999998876643  999999999998763210000    000    111111111    


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                        .+.+.+++++|+|+++++++....  ..| .++++|.
T Consensus       209 --~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          209 --HPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             --STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence              134568999999999999997643  234 5566653

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=2.2e-26  Score=194.05  Aligned_cols=220  Identities=15%  Similarity=0.169  Sum_probs=163.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      .++|+||||||+|+||++++++|+++|++|++++++...........+.....++.++.+|++|.++++++++       
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999988544333333444444445678999999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+            
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  158 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF------------  158 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS------------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC------------
Confidence            5799999999765331    122346789999999888887774    44667999999987776543            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               +...|+.||.+.+.+++.++.+   .|++++.++||.+.++....   .............      ..+.
T Consensus       159 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~------~~~~  220 (256)
T 3ezl_A          159 ---------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA---IRPDVLEKIVATI------PVRR  220 (256)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHHHS------TTSS
T ss_pred             ---------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc---cCHHHHHHHHhcC------CCCC
Confidence                     1567999999999988887765   48999999999998875332   1233333333332      3456


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +.+++|+|+++++++....  ..| .++++|
T Consensus       221 ~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          221 LGSPDEIGSIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            8899999999999996543  244 567765

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.95  E-value=5.3e-26  Score=190.13  Aligned_cols=225  Identities=17%  Similarity=0.190  Sum_probs=164.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||++.||++++++|+++|++|++.+|+.+..  ...+++...+.++.++.+|++|.++++++++     
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG--AFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH--HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH--HHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999987743  2333444445788999999999998887764     


Q ss_pred             --CcceEEEecccCCCCC---CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 --GCNGVFHIACPAPSTT---VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                        .+|++|||||......   ..+.|+..+++|+.++..+++++.++   +-.+||++||..+..+.++           
T Consensus        81 ~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~-----------  149 (258)
T 4gkb_A           81 FGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGN-----------  149 (258)
T ss_dssp             HSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSS-----------
T ss_pred             hCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCC-----------
Confidence              5799999999754322   22346778899999999999988643   2369999999988765542           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC---ccHHHHHHHHhcCccccCCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN---TSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  221 (319)
                                ...|+.||.+.+.+.+.++.+   +|+++..|.||.+.++.......   .............|.     
T Consensus       150 ----------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----  214 (258)
T 4gkb_A          150 ----------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----  214 (258)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----
Confidence                      466999999999888887654   48999999999998876443211   011112222222211     


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      .+.+..++|+|.++++++.....  .| .+.++|.
T Consensus       215 g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          215 GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence            14678999999999999975432  44 4566553

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.95  E-value=3.6e-26  Score=194.01  Aligned_cols=221  Identities=15%  Similarity=0.163  Sum_probs=162.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+...........+...+.++.++.+|++|.++++++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4568899999999999999999999999999998655443333334443445679999999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++++..    .+.++||++||..++.+.+.           
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  171 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG-----------  171 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-----------
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC-----------
Confidence            6899999999764332    1223467889999999999998864    45679999999877765431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.||.+.+.+++.++.+   .|++++.++||.+.++......   ...    .. .........+.
T Consensus       172 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~----~~-~~~~~~~~~~~  233 (269)
T 3gk3_A          172 ----------QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP---QDV----LE-AKILPQIPVGR  233 (269)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------------CCSGGGCTTSS
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc---hhH----HH-HHhhhcCCcCC
Confidence                      466999999999988887765   3899999999999987644221   100    00 01111124567


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +.+++|+|+++++++....  ..| .++++|
T Consensus       234 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  264 (269)
T 3gk3_A          234 LGRPDEVAALIAFLCSDDAGFVTGADLAING  264 (269)
T ss_dssp             CBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred             ccCHHHHHHHHHHHhCCCcCCeeCcEEEECC
Confidence            8899999999999997653  234 567765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.95  E-value=2.8e-26  Score=194.49  Aligned_cols=213  Identities=15%  Similarity=0.146  Sum_probs=159.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      .++|+||||||+|+||++++++|+++|++|++++|+....           ...+..+.+|++|.+++.++++       
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------VNVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------TTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------cCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999999999986532           1356788999999999988775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++++..    .+.++||++||..++.+.+.           
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  149 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN-----------  149 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT-----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC-----------
Confidence            6899999999754431    1122466788999999999998764    36679999999887665431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhcCccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~  217 (319)
                                ...|+.||.+.+.+++.++.++  +++++.++||.+.++.....        ..............    
T Consensus       150 ----------~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  215 (269)
T 3vtz_A          150 ----------AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ----  215 (269)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH----
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc----
Confidence                      4669999999999999988765  79999999999988642100        00001111122111    


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                        ...+.+.+++|+|+++++++.....  .| .++++|.
T Consensus       216 --~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          216 --HPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             --STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence              2456788999999999999976432  34 5677664

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=7.9e-26  Score=189.27  Aligned_cols=216  Identities=19%  Similarity=0.140  Sum_probs=159.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+|++|+++||||+|+||++++++|+++|++|++++|+.+... ....++     ++.++.+|++|.++++++++     
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR-EAAEAV-----GAHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHH
Confidence            8888999999999999999999999999999999999754221 111111     37889999999999888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+.    +.++||++||.. .++.+.         
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~---------  144 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLG---------  144 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTT---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCC---------
Confidence              4899999999754321    12234678899999999999988753    567999999977 554321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.....   ............      ..
T Consensus       145 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~  203 (245)
T 1uls_A          145 ------------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAAT------PL  203 (245)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTC------TT
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc---CHHHHHHHHhhC------CC
Confidence                        456999999999888887654   489999999999988764321   122222222221      23


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ..+++++|+|+++++++....  ..| .+.++|.
T Consensus       204 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          204 GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            457899999999999997543  234 4566653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.95  E-value=1.7e-26  Score=195.56  Aligned_cols=227  Identities=18%  Similarity=0.095  Sum_probs=161.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-c-CCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-A-SENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.... .....++.. . ..++.++.+|++|.+++.++++   
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERL-RAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            457789999999999999999999999999999999986532 222222222 1 2358999999999998887765   


Q ss_pred             ----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                          .+|++|||||......    ..+.+...+++|+.++.++++++.+.    +..+||++||..++.+.+.       
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  155 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH-------  155 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT-------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC-------
Confidence                5799999999754321    12334678999999999999998653    4568999999877654431       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC------CccHHHHHHHHhcC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV------NTSSLVLIKLLKEG  214 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~~~~  214 (319)
                                    ...|+.||.+.+.+++.++.+   +|++++.++||.+.++......      ......+.......
T Consensus       156 --------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
T 3lf2_A          156 --------------MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN  221 (265)
T ss_dssp             --------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH
T ss_pred             --------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc
Confidence                          566999999999999888765   3899999999999876421100      00011111111110


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                         ...+...+.+++|+|+++++++....  ..| .+.++|
T Consensus       222 ---~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  259 (265)
T 3lf2_A          222 ---KQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSG  259 (265)
T ss_dssp             ---TTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred             ---cCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence               00144668899999999999997543  245 456665

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.95  E-value=1e-26  Score=196.83  Aligned_cols=212  Identities=20%  Similarity=0.200  Sum_probs=156.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+....            .....+.+|++|.+++..+++      
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~   92 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------AADLHLPGDLREAAYADGLPGAVAAGL   92 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------CCSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------HhhhccCcCCCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999976532            122445789999988877664      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+           
T Consensus        93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------  161 (266)
T 3uxy_A           93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGP-----------  161 (266)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC-----------
Confidence             6899999999765421    123346778899999999999984    44677999999987765432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCC----CCccHHHHHHHHhcCccccC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSK----VNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~  219 (319)
                                +...|+.||.+.+.+++.++.++   |++++.++||.+.++.....    .............      .
T Consensus       162 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~------~  225 (266)
T 3uxy_A          162 ----------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGR------T  225 (266)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHT------T
T ss_pred             ----------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHh------c
Confidence                      15679999999999998887653   89999999999988742110    0000111111111      1


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...+.+.+++|+|+++++++.....  .| .++++|
T Consensus       226 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3uxy_A          226 VPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG  261 (266)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            2456789999999999999986532  34 566665

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.7e-26  Score=197.25  Aligned_cols=227  Identities=14%  Similarity=0.111  Sum_probs=160.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCC---CeEEEEccCCChhhHHHHhc---
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASE---NLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.... .....++...+.   ++.++.+|++|.++++++++   
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERL-EETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            47789999999999999999999999999999999976532 122223322222   68999999999999888775   


Q ss_pred             ----CcceEEEecccCCCCC--------CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccC-CCCC
Q 020924           76 ----GCNGVFHIACPAPSTT--------VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLN-PRWP  138 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~~--------~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~-~~~~  138 (319)
                          .+|+||||||......        ..+.+...+++|+.++.++++++.+.    + ++||++||..++.+. +   
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~---  157 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQP---  157 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCC---
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCC---
Confidence                5899999999754321        11224678899999999999998753    4 799999997765432 1   


Q ss_pred             CCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHH--HHHHHHhc
Q 020924          139 KGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSL--VLIKLLKE  213 (319)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~--~~~~~~~~  213 (319)
                                        +...|+.||.+.+.+++.++.+   +|+++++++||.++++...........  ........
T Consensus       158 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (280)
T 1xkq_A          158 ------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS  219 (280)
T ss_dssp             ------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             ------------------cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH
Confidence                              1466999999999999888754   589999999999998753211000000  00011111


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccC---CCCc-eEEEecc
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKA---EAEG-RYICTAH  253 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~~~~~~~  253 (319)
                      .  ......+.+.+++|+|+++++++...   ...| .++++|.
T Consensus       220 ~--~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          220 H--KECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             C--TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             H--HcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            0  01113456899999999999999754   2344 5666653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.95  E-value=1.1e-25  Score=192.67  Aligned_cols=225  Identities=17%  Similarity=0.142  Sum_probs=162.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC--------------hh-hHHHHHhhhccCCCeEEEEccCCCh
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS--------------DE-KNARLYELEKASENLKLFKADLLDY   67 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------------~~-~~~~~~~~~~~~~~~~~~~~Dl~~~   67 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+..              .. .......+...+.++.++.+|++|.
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            56899999999999999999999999999999998732              11 1122223333456899999999999


Q ss_pred             hhHHHHhc-------CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccc
Q 020924           68 DSVKSAIV-------GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVA  130 (319)
Q Consensus        68 ~~~~~~~~-------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~  130 (319)
                      +++.++++       .+|++|||||......     ..+.+...+++|+.++.++++++...    + ..+||++||..+
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            99988775       6899999999754422     12335678999999999999998653    2 459999999877


Q ss_pred             cccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC-------
Q 020924          131 VGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV-------  200 (319)
Q Consensus       131 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~-------  200 (319)
                      +.+.+.                     ...|+.||.+.+.+++.++.+   +|++++.++||.+.++......       
T Consensus       169 ~~~~~~---------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  227 (286)
T 3uve_A          169 LKAYPH---------------------TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP  227 (286)
T ss_dssp             TSCCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred             ccCCCC---------------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccc
Confidence            654431                     466999999999999888765   5899999999999988643210       


Q ss_pred             ---CccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          201 ---NTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       201 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                         ............    ......+.+.+++|+|+++++++....  ..| .++++|
T Consensus       228 ~~~~~~~~~~~~~~~----~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  281 (286)
T 3uve_A          228 DLENPGPDDMAPICQ----MFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA  281 (286)
T ss_dssp             TSSSCCHHHHHHHHH----TTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccccchhhHHHHHH----hhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence               000000001000    001111678999999999999997543  244 566665

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.95  E-value=7e-26  Score=192.03  Aligned_cols=222  Identities=13%  Similarity=0.091  Sum_probs=163.4

Q ss_pred             CCCCCCeEEEeCcchH--HHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cC-CCeEEEEccCCChhhHHHHhc-
Q 020924            1 MALEKERVCVTGAGGF--LASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-AS-ENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      |++++|+++||||+|+  ||++++++|+++|++|++++|+...  ...+.++.. .+ .++.++.+|++|.++++++++ 
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL--EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH--HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            3467899999999988  9999999999999999999998542  222222221 12 368999999999999988775 


Q ss_pred             ------CcceEEEecccCCC----C----CCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCC
Q 020924           76 ------GCNGVFHIACPAPS----T----TVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~----~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~  139 (319)
                            .+|++|||||....    .    ...+.+...+++|+.++.++++++....  .++||++||..++.+.+.   
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---  157 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN---  157 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT---
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC---
Confidence                  57999999997641    1    1122346678999999999999998763  349999999877654431   


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (319)
                                        ...|+.||.+.+.+++.++.+   +|++++.++||.+.++...... .............  
T Consensus       158 ------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~--  216 (266)
T 3oig_A          158 ------------------YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-DFNSILKDIEERA--  216 (266)
T ss_dssp             ------------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHS--
T ss_pred             ------------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc-chHHHHHHHHhcC--
Confidence                              466999999999998888765   4899999999999987544321 1123333333322  


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                          ....+.+++|+|+++++++....  ..| .+.++|
T Consensus       217 ----~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          217 ----PLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             ----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ----CCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence                34567899999999999998643  344 566665

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.95  E-value=2.8e-26  Score=193.09  Aligned_cols=223  Identities=15%  Similarity=0.090  Sum_probs=163.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+... ...+++   +.++.++.+|++|.+++.++++       
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIA-RIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999865321 122222   3578999999999998887664       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      .+|++|||||......    ..+.++..+++|+.++.++++++.+.  ..++||++||..++.+.+              
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  147 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP--------------  147 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT--------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC--------------
Confidence            5799999999764321    22335678999999999999999875  235899999987765443              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHH----HHHHHHhcCccccCCcc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSL----VLIKLLKEGYESLENKL  222 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  222 (319)
                             +...|+.||.+.+.+.+.++.++   |++++.++||.+.++...... ....    +.......      .+.
T Consensus       148 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~------~p~  213 (255)
T 4eso_A          148 -------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG-ITEAERAEFKTLGDNI------TPM  213 (255)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTT-SCHHHHHHHHHHHHHH------STT
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccccc-CChhhHHHHHHHHhcc------CCC
Confidence                   15679999999999999887664   899999999999988643221 1111    11111111      145


Q ss_pred             cccccHHHHHHHHHHhhccCC-CCc-eEEEec-ccCCH
Q 020924          223 RMIVDVRDVAEALLLAYEKAE-AEG-RYICTA-HMIRA  257 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~~-~~~s~  257 (319)
                      +.+.+++|+|+++++++.... ..| .++++| ...++
T Consensus       214 ~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          214 KRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             SSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTB
T ss_pred             CCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccC
Confidence            668899999999999987522 234 566765 44443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.95  E-value=1.3e-25  Score=193.35  Aligned_cols=224  Identities=15%  Similarity=0.132  Sum_probs=162.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC----------hh-hHHHHHhhhccCCCeEEEEccCCChhhHH
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS----------DE-KNARLYELEKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+..          .. ......++...+.++.++.+|++|.+++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            56799999999999999999999999999999998732          11 12223333344568999999999999998


Q ss_pred             HHhc-------CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccC
Q 020924           72 SAIV-------GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLN  134 (319)
Q Consensus        72 ~~~~-------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~  134 (319)
                      ++++       .+|++|||||......     ..+.+...+++|+.++.++++++...     +.++||++||..++.+.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  185 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA  185 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence            8775       6899999999764432     12335778999999999999998643     35699999998776544


Q ss_pred             CCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCC-----------
Q 020924          135 PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKV-----------  200 (319)
Q Consensus       135 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~-----------  200 (319)
                      +.                     ...|+.||.+.+.+++.++.++   |++++.++||.+.++......           
T Consensus       186 ~~---------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  244 (299)
T 3t7c_A          186 EN---------------------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLEN  244 (299)
T ss_dssp             TT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSS
T ss_pred             CC---------------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhcc
Confidence            31                     4669999999999998887653   899999999999988643210           


Q ss_pred             CccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          201 NTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..............     .....+..++|+|+++++++....  ..| .++++|
T Consensus       245 ~~~~~~~~~~~~~~-----~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  294 (299)
T 3t7c_A          245 PTVEDFQVASRQMH-----VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDG  294 (299)
T ss_dssp             CCHHHHHHHHHHHS-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             chhhHHHHHhhhhc-----ccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence            00000000000000     011568899999999999997643  234 566665

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.95  E-value=4.9e-26  Score=193.74  Aligned_cols=222  Identities=14%  Similarity=0.098  Sum_probs=159.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+..... ....++   +.++.++.+|++|.+++.++++       
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAAD-AAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56799999999999999999999999999999999765321 222222   4578999999999999888765       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    ..+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+            
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~------------  170 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG------------  170 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC------------
Confidence            6899999999764321    1233567899999999999998864    4567999999987765432            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccH-HHHHHHHhcCccccCCccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSS-LVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  223 (319)
                               +...|+.||.+.+.+++.++.+   +|++++.++||.++++.......... ........   .......+
T Consensus       171 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  238 (277)
T 3gvc_A          171 ---------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGAR---SMIARLQG  238 (277)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHH---HHHHHHHS
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhh---hhhhcccc
Confidence                     1567999999999999887765   58999999999999874211000000 00000000   00011335


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+.+++|+|+++++++....  ..| .++++|
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG  270 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADG  270 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence            68899999999999997543  244 567765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-26  Score=192.82  Aligned_cols=219  Identities=16%  Similarity=0.126  Sum_probs=158.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Ccc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCN   78 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d   78 (319)
                      +|++|+++||||+|+||++++++|+++|++|++++|+..+.     ++.. ...++.++.+|++|.++++++.+   .+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id   76 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-----QELE-KYPGIQTRVLDVTKKKQIDQFANEVERLD   76 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----GGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            47889999999999999999999999999999999975422     1111 11368899999999998887653   689


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+               
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------  141 (246)
T 2ag5_A           77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV---------------  141 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---------------
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC---------------
Confidence            9999999754321    1223467789999999999999864    3667999999977654321               


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccccCCcccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                           .+...|+.||.+.+.+++.++.+   +|++++++||+.++++......   ..............      ....
T Consensus       142 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  210 (246)
T 2ag5_A          142 -----VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ------KTGR  210 (246)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC------TTSS
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC------CCCC
Confidence                 01466999999999999988765   4899999999999987421100   00011111221111      2345


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +++++|+|+++++++....  ..| .+.++|
T Consensus       211 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          211 FATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (246)
T ss_dssp             CEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            8899999999999997543  234 456655

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.95  E-value=4.8e-26  Score=191.62  Aligned_cols=215  Identities=13%  Similarity=0.094  Sum_probs=156.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.+.. ....+++   +.++.++.+|++|.+++.++++      
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG-AATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999975432 1122222   2468889999999999988776      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+           
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  146 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA-----------  146 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC-----------
Confidence             6899999999754321    12234678899999998665554    445678999999987765432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc---cccCC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY---ESLEN  220 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~  220 (319)
                                +...|+.||.+.+.+++.++.+   +|++++++|||.++++...           .. ....   .....
T Consensus       147 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~-~~~~~~~~~~~~  204 (254)
T 1hdc_A          147 ----------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-----------ET-GIRQGEGNYPNT  204 (254)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----------HH-TCCCSTTSCTTS
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc-----------cc-chhHHHHHHhcC
Confidence                      1466999999999998888765   4899999999999886321           10 0000   00111


Q ss_pred             cccccc-cHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          221 KLRMIV-DVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       221 ~~~~~i-~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ....+. +++|+|+++++++....  ..| .+.++|.
T Consensus       205 p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          205 PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            334578 99999999999997643  234 5566653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=1.1e-26  Score=201.04  Aligned_cols=223  Identities=15%  Similarity=0.147  Sum_probs=159.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC-Ch----hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP-SD----EKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      ||+|+||||||+||++++++|+++|++|++++|+. ..    .....+..+.  ..+++++.+|++|.+++.++++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence            57899999999999999999999999999999986 11    1222222221  24789999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      |||+++...               +.++.+++++|++.+ +++||+ |+ .  +...        +|..+..|     ..
T Consensus        80 vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~--g~~~--------~~~~~~~p-----~~  127 (307)
T 2gas_A           80 VICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SE-F--GLDV--------DRHDAVEP-----VR  127 (307)
T ss_dssp             EEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SC-C--SSCT--------TSCCCCTT-----HH
T ss_pred             EEECCcccc---------------cccHHHHHHHHHhcCCceEEee-cc-c--ccCc--------ccccCCCc-----ch
Confidence            999998532               345788999999998 999984 43 2  2111        12222111     13


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEAL  235 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~  235 (319)
                      +.| .+|..+|.+++.    .+++++++||+.++++.........    .....+....   .++..++|++++|+|+++
T Consensus       128 ~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  198 (307)
T 2gas_A          128 QVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVGTFT  198 (307)
T ss_dssp             HHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHHHHH
Confidence            569 999999988764    4899999999999876422110000    0000111111   345778999999999999


Q ss_pred             HHhhccCCCCc-eEEE-e-cccCCHHHHHHHHHHhCCC
Q 020924          236 LLAYEKAEAEG-RYIC-T-AHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       236 ~~~~~~~~~~~-~~~~-~-~~~~s~~e~~~~~~~~~g~  270 (319)
                      +.++..+...+ .|++ + +..+|+.|+++.+.+.+|.
T Consensus       199 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          199 IRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             HHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence            99998765434 4544 4 4789999999999999883

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.95  E-value=2.3e-26  Score=194.44  Aligned_cols=203  Identities=19%  Similarity=0.116  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++       
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL-RAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            6789999999999999999999999999999999986542 22233333335678999999999999888775       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|+||||||.....     ...+.+...+++|+.++.++++++..    .+.++||++||..++.+.+           
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  174 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA-----------  174 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT-----------
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC-----------
Confidence            489999999973221     11223467899999999999998754    4667999999987665432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +...|+.||.+.+.+++.++.+   .|++++.++||.+.++......           .      .....
T Consensus       175 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~------~~~~~  227 (262)
T 3rkr_A          175 ----------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS-----------A------KKSAL  227 (262)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc-----------c------ccccc
Confidence                      1566999999999999888755   5899999999999876432110           0      01234


Q ss_pred             ccccHHHHHHHHHHhhccCCC
Q 020924          224 MIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      .+++++|+|+++++++.....
T Consensus       228 ~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          228 GAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             -CCCHHHHHHHHHHHHTCCTT
T ss_pred             cCCCHHHHHHHHHHHhcCccc
Confidence            578999999999999986543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.95  E-value=5.9e-26  Score=193.54  Aligned_cols=229  Identities=16%  Similarity=0.136  Sum_probs=162.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC-----------hh-hHHHHHhhhccCCCeEEEEccCCChhh
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS-----------DE-KNARLYELEKASENLKLFKADLLDYDS   69 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~   69 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+..           .. .......+...+.++.++.+|++|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            367899999999999999999999999999999998421           11 122223333345688999999999999


Q ss_pred             HHHHhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEecccccccc
Q 020924           70 VKSAIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGL  133 (319)
Q Consensus        70 ~~~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~  133 (319)
                      +.++++       .+|++|||||......    ..+.++..+++|+.++.++++++...    + .++||++||..++.+
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence            988775       4899999999765431    12335678999999999999987543    3 469999999877654


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHH
Q 020924          134 NPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKL  210 (319)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~  210 (319)
                      .+.                     ...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....  .........
T Consensus       168 ~~~---------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~  224 (277)
T 3tsc_A          168 QPF---------------------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAM  224 (277)
T ss_dssp             CSS---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHH
T ss_pred             CCC---------------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhcc
Confidence            431                     466999999999999988765   489999999999998753211  000111111


Q ss_pred             HhcCccc--c-CCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          211 LKEGYES--L-ENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       211 ~~~~~~~--~-~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      .......  . ......+.+++|+|+++++++.....  .| .++++|.
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            1111111  1 11222589999999999999976432  44 5666654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.95  E-value=5.4e-26  Score=195.09  Aligned_cols=220  Identities=13%  Similarity=0.034  Sum_probs=160.4

Q ss_pred             CCCCeEEEeCcchH--HHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGF--LASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|++|||||+|+  ||++++++|+++|++|++++|+..  ....+.++.....++.++.+|++|.++++++++     
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA--LKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH--HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            66799999999988  999999999999999999998843  222233332223468899999999999988775     


Q ss_pred             --CcceEEEecccCCC--------CCCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPS--------TTVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++|||||....        ....+.+...+++|+.++.++++++.+..  .++||++||..++.+.+.       
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------  179 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN-------  179 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT-------
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCc-------
Confidence              58999999997641        11223356789999999999999998753  359999999877654431       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.||.+.+.+++.++.+   +|++++.++||.+.++...... .............      
T Consensus       180 --------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~------  238 (293)
T 3grk_A          180 --------------YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-DFRYILKWNEYNA------  238 (293)
T ss_dssp             --------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-CHHHHHHHHHHHS------
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-chHHHHHHHHhcC------
Confidence                          466999999999999888765   4899999999999987643221 1122222222222      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ....+.+++|+|+++++++....  ..| .++++|
T Consensus       239 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  273 (293)
T 3grk_A          239 PLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADS  273 (293)
T ss_dssp             TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCCcceEEEECC
Confidence            34567899999999999997543  244 556765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=4.4e-27  Score=204.88  Aligned_cols=221  Identities=13%  Similarity=0.097  Sum_probs=160.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC-Ch---hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP-SD---EKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +||+|+||||||+||++++++|+++|++|++++|+. ..   .....+..+.  ..+++++.+|++|.+++.++++++|+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~d~   80 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQVDI   80 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCCCE
Confidence            357899999999999999999999999999999986 21   1222222221  25789999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN  158 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (319)
                      |||+++...               +.++.+++++|++.+ +++||+ |+ .  +..        .+|..+..|     ..
T Consensus        81 vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~--g~~--------~~~~~~~~p-----~~  128 (321)
T 3c1o_A           81 VISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SD-F--GCE--------EDRIKPLPP-----FE  128 (321)
T ss_dssp             EEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SC-C--SSC--------GGGCCCCHH-----HH
T ss_pred             EEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-cc-c--ccC--------ccccccCCC-----cc
Confidence            999997532               345688999999998 999983 33 2  111        122222111     13


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHH---HHHhcCccc---cCCcccccccHHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLI---KLLKEGYES---LENKLRMIVDVRDVA  232 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~i~v~D~a  232 (319)
                      +.| .+|..+|.+++.    .+++++++||+.++++..       ..+..   ....+....   .++..++|++++|+|
T Consensus       129 ~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIA  196 (321)
T ss_dssp             HHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHH
T ss_pred             hHH-HHHHHHHHHHHH----cCCCeEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHHH
Confidence            569 999999988864    489999999998887521       11111   001222222   345778999999999


Q ss_pred             HHHHHhhccCCCCc-eEEEe--cccCCHHHHHHHHHHhCCC
Q 020924          233 EALLLAYEKAEAEG-RYICT--AHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       233 ~~~~~~~~~~~~~~-~~~~~--~~~~s~~e~~~~~~~~~g~  270 (319)
                      +++..++.++...+ .|++.  ++.+|+.|+++.+.+.+|.
T Consensus       197 ~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          197 KYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL  237 (321)
T ss_dssp             HHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence            99999998765434 56543  4799999999999999883

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.95  E-value=9.4e-27  Score=198.02  Aligned_cols=224  Identities=15%  Similarity=0.094  Sum_probs=162.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+++||||+|+||++++++|+++|++|++++|+..... ....++...+.++.++.+|++|.+++.++++      
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTA-AVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTH-HHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999876432 2333333345688999999999998888775      


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    ..+.+...+++|+.++.++++++..    .+.++||++||..++.+.+            
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~------------  176 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS------------  176 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC------------
Confidence            6899999999754321    1233467899999999999999853    4567999999987665321            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               +...|+.||.+.+.+++.++.++   |++++.++||.+.++....................     .....
T Consensus       177 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----~p~~r  242 (275)
T 4imr_A          177 ---------VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTL-----NWMGR  242 (275)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHH-----STTCS
T ss_pred             ---------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhc-----CccCC
Confidence                     14569999999999998887653   89999999999987642110000011111111111     02345


Q ss_pred             cccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +..++|+|+++++++.....  .| .++++|
T Consensus       243 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          243 AGRPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            78899999999999976432  44 456654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.94  E-value=2.6e-26  Score=192.35  Aligned_cols=219  Identities=16%  Similarity=0.158  Sum_probs=161.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+... ....++   +.++.++.+|++|.++++++++      
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK-AAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            478899999999999999999999999999999998765321 222222   4578999999999999988775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCC-CCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAK-VKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|++|||||......    ..+.+...+++|+.++.++++++.    +.+ .++||++||..++.+.+.         
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  149 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN---------  149 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC---------
Confidence             6899999999764421    123356789999999999999854    444 579999999887765432         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.||.+.+.+++.++.+   +|++++.++||.+.++..........   ......     ....
T Consensus       150 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~-----~~~~  209 (247)
T 3rwb_A          150 ------------MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEA---FGFVEM-----LQAM  209 (247)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGG---HHHHHH-----HSSS
T ss_pred             ------------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHH---HHHHhc-----cccc
Confidence                        466999999999998888765   58999999999998764322110000   011111     0134


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      +.+.+++|+|+++++++.....  .| .++++|.
T Consensus       210 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          210 KGKGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            5678999999999999976532  44 4566653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=1.2e-26  Score=202.07  Aligned_cols=232  Identities=15%  Similarity=0.120  Sum_probs=170.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcC----------CChhhHHHHHhhhccCCCeEEEEccCCChhhHHH
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTARE----------PSDEKNARLYELEKASENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+          ... ......++...+.++.++.+|++|.+++.+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSA-AQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSH-HHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            567899999999999999999999999999999987          222 223334444445678899999999999888


Q ss_pred             Hhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCC----------CCEEEEecccccc
Q 020924           73 AIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAK----------VKRVIVVSSGVAV  131 (319)
Q Consensus        73 ~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~----------~~~iv~~SS~~~~  131 (319)
                      +++       .+|+||||||......    ..+.+...+++|+.++.++++++....          -.+||++||..++
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence            775       6899999999765421    123356789999999999999886431          1499999998877


Q ss_pred             ccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHH
Q 020924          132 GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLI  208 (319)
Q Consensus       132 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~  208 (319)
                      .+.+.                     ...|+.||.+.+.+++.++.+   +|++++.++|| +.++.........   ..
T Consensus       184 ~~~~~---------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~---~~  238 (322)
T 3qlj_A          184 QGSVG---------------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM---MA  238 (322)
T ss_dssp             HCBTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------
T ss_pred             cCCCC---------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh---hh
Confidence            65431                     466999999999999988766   58999999999 7666543221110   00


Q ss_pred             HHHhcCccccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec-cc-----------------CCHHHHHHHHHHh
Q 020924          209 KLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HM-----------------IRARDLVDKLKSL  267 (319)
Q Consensus       209 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~-----------------~s~~e~~~~~~~~  267 (319)
                               .......+++++|+|+++++++.....  .| .++++| ..                 .++.|+++.+.+.
T Consensus       239 ---------~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~  309 (322)
T 3qlj_A          239 ---------TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADL  309 (322)
T ss_dssp             --------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHH
T ss_pred             ---------ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHH
Confidence                     011234567999999999999975432  34 456654 22                 3779999999998


Q ss_pred             CC
Q 020924          268 YP  269 (319)
Q Consensus       268 ~g  269 (319)
                      +|
T Consensus       310 ~~  311 (322)
T 3qlj_A          310 LG  311 (322)
T ss_dssp             HH
T ss_pred             hh
Confidence            86

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.94  E-value=1.5e-26  Score=199.42  Aligned_cols=217  Identities=15%  Similarity=0.079  Sum_probs=154.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++       
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPAL-EQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999999999999986542 22333343345678999999999999988775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|+||||||......    ..+.+...+++|+.++.++++++...    + .++||++||..++.+.+.          
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  177 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG----------  177 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC----------
Confidence            6899999999764321    12334678999999999999998542    3 569999999887664431          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cC--C
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LE--N  220 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~  220 (319)
                                 ...|+.||.+.+.+++.++.+   .|++++.++||.+.++.........  .........+.. .+  .
T Consensus       178 -----------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  244 (301)
T 3tjr_A          178 -----------LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR--GADYGMSATPEGAFGPLP  244 (301)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC--------------------
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccccccc--chhhccccChhhhccccc
Confidence                       567999999999888887655   3899999999999876421100000  000000000110 11  1


Q ss_pred             cccccccHHHHHHHHHHhhccCC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ...++++++|+|++++.+++.+.
T Consensus       245 ~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          245 TQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             ----CCCHHHHHHHHHHHHHHTC
T ss_pred             cccCCCCHHHHHHHHHHHHhcCC
Confidence            34568999999999999998754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=4.5e-26  Score=193.10  Aligned_cols=222  Identities=18%  Similarity=0.149  Sum_probs=158.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh-hccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL-EKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+..... ....++ ...+.++.++.+|++|.+++.++++     
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS-EAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999854321 122222 1123578889999999999888775     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEecccc-ccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGV-AVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~-~~~~~~~~~~~~~~~  144 (319)
                        .+|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||.. +..+.+         
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------  167 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP---------  167 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS---------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCC---------
Confidence              6899999999754321    1122466889999999999988853    4567999999976 433221         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +...|+.||.+.+.+++.++.+   +|+++++++||.+.++....... ............      .
T Consensus       168 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~------p  228 (267)
T 1vl8_A          168 ------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRI------P  228 (267)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTC------T
T ss_pred             ------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-ChHHHHHHHhhC------C
Confidence                        1466999999999999888765   48999999999998875321000 011112222211      2


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ...+++++|+|+++++++....  ..| .+.++|
T Consensus       229 ~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          229 LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECC
Confidence            3458899999999999997542  244 456655

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.94  E-value=2.1e-26  Score=190.12  Aligned_cols=204  Identities=15%  Similarity=0.098  Sum_probs=154.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Cc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   77 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..                     +|++|.++++++++   .+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~g~i   60 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETIGAF   60 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHHCSE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHhCCC
Confidence            5678899999999999999999999999999999988643                     69999999998876   68


Q ss_pred             ceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           78 NGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        78 d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      |++|||||.....     ...+.+...+++|+.++.++++++.+..  .++||++||..++.+.+               
T Consensus        61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------------  125 (223)
T 3uce_A           61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA---------------  125 (223)
T ss_dssp             EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT---------------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC---------------
Confidence            9999999976321     1122346678999999999999998763  24899999987665432               


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCC-ceEEEEecCcccCCCCCCCCCc-cHHHHHHHHhcCccccCCcccccccH
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTG-LDVVTICPNLVLGPLLQSKVNT-SSLVLIKLLKEGYESLENKLRMIVDV  228 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~lrp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v  228 (319)
                            +...|+.+|.+.+.+++.++.+++ ++++.++||.+.++........ ...+........      +.+.+.++
T Consensus       126 ------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  193 (223)
T 3uce_A          126 ------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHL------PVGKVGEA  193 (223)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHS------TTCSCBCH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcC------CCCCccCH
Confidence                  156699999999999999987754 9999999999998865432111 111122222222      45578899


Q ss_pred             HHHHHHHHHhhccCCCCc-eEEEec
Q 020924          229 RDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      +|+|+++++++......| .++++|
T Consensus       194 ~dvA~~~~~l~~~~~~tG~~i~vdg  218 (223)
T 3uce_A          194 SDIAMAYLFAIQNSYMTGTVIDVDG  218 (223)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHHHHHHccCCCCCCcEEEecC
Confidence            999999999998655555 566665

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.94  E-value=3.9e-26  Score=192.80  Aligned_cols=210  Identities=17%  Similarity=0.177  Sum_probs=151.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++       
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999999999986532 22233333335678899999999999888765       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    ..+.+...+++|+.++.++++++..    .+.++||++||..++.+.+.           
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~-----------  149 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT-----------  149 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC-----------
Confidence            6899999999764321    1233567889999999999888754    35679999999877665431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC-CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                                ...|+.||.+.+.+++.++.+. |++++.++||.+.++.......   ......       .....+.++
T Consensus       150 ----------~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~-------~~~~~~~~~  209 (264)
T 3tfo_A          150 ----------AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITH---EETMAA-------MDTYRAIAL  209 (264)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------CC
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccc---hhHHHH-------HHhhhccCC
Confidence                      4669999999999999887765 8999999999998875332100   000000       000112257


Q ss_pred             cHHHHHHHHHHhhccCCC
Q 020924          227 DVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~~  244 (319)
                      +++|+|+++++++..+..
T Consensus       210 ~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          210 QPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             CHHHHHHHHHHHHHSCTT
T ss_pred             CHHHHHHHHHHHhcCCcc
Confidence            999999999999998765

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=5.8e-26  Score=190.29  Aligned_cols=210  Identities=14%  Similarity=0.113  Sum_probs=152.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+|+||||+|+||++++++|+++|++|++++|+....            ..+..+.+|++|.+++.++++      
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH------------HHhcCeeccCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999986532            122247899999999888765      


Q ss_pred             -CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||..++++.+           
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  148 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-----------  148 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC-----------
Confidence             579999999975432    11233577899999999999998864    4667999999987665432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                +...|+.||.+.+.+++.++.+   +|+++++++||.+.++....   ............      ....
T Consensus       149 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~------~p~~  209 (247)
T 1uzm_A          149 ----------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQF------IPAK  209 (247)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---SCHHHHHHHGGG------CTTC
T ss_pred             ----------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh---cCHHHHHHHHhc------CCCC
Confidence                      1466999999999988887665   48999999999998764211   111111111111      1335


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .+++++|+|+++++++....  ..| .+.++|.
T Consensus       210 ~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          210 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence            68999999999999997543  244 5566653

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.94  E-value=4e-26  Score=192.59  Aligned_cols=221  Identities=15%  Similarity=0.097  Sum_probs=158.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh-hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-KNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      +|+++||||+|+||++++++|+++|++|++++|+.... ......++...+.++.++.+|++|.+++.++++       .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999999999986541 112223333334578999999999999888775       6


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CC-CEEEEeccccccccCCCCCCCcccCCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KV-KRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      +|+||||||......    ..+.+...+++|+.++.++++++.+.    +. ++||++||..++.+.+            
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  149 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP------------  149 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC------------
Confidence            899999999754321    12234678999999999999998753    55 7999999987665432            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC--------CccHHHHHHHHhcCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV--------NTSSLVLIKLLKEGYE  216 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~  216 (319)
                               +...|+.||.+.+.+++.++.+   +|+++++++||.+.++......        ............    
T Consensus       150 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----  216 (258)
T 3a28_C          150 ---------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSS----  216 (258)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHT----
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHh----
Confidence                     1466999999999999887755   4899999999999876421000        000000111111    


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                        ......+.+++|+|+++++++....  ..| .+.++|
T Consensus       217 --~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          217 --SIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDG  253 (258)
T ss_dssp             --TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             --cCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence              1134568999999999999997643  244 456655

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=3.3e-26  Score=197.70  Aligned_cols=222  Identities=13%  Similarity=0.086  Sum_probs=158.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-----cCCCeEEEEccCCChhhHHHHhc--
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-----ASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |++|+|+||||+|+||++++++|+++|++|++++|+..... ....++..     .+.++.++.+|++|.+++.++++  
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK-SAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            56789999999999999999999999999999999854321 12222221     24578999999999999988876  


Q ss_pred             -----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 -----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                           .+|+||||||......    ..+.+...+++|+.++.++++++.+.    +.++||++||.+ ..+.+       
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~-------  166 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP-------  166 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT-------
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCC-------
Confidence                 4899999999643221    11224667899999999999998762    356899999976 43322       


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCC-ccHHHHHHHHhcCcccc
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVN-TSSLVLIKLLKEGYESL  218 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~  218 (319)
                                    ....|+.+|.+.+.+.+.++.++   |++++++||+.++|+....... ...........      
T Consensus       167 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------  226 (303)
T 1yxm_A          167 --------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ------  226 (303)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG------
T ss_pred             --------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHh------
Confidence                          14569999999999998887664   8999999999999984211110 00001111111      


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ......+++++|+|+++++++....  ..| .++++|.
T Consensus       227 ~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          227 KIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             GSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence            1133568999999999999997543  234 5677653

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.94  E-value=9e-26  Score=185.77  Aligned_cols=215  Identities=11%  Similarity=0.048  Sum_probs=161.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Ccce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   79 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.+....       ....++..+.+|++|.++++++++   .+|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            378999999999999999999999999999999998764311       124578999999999999998876   5799


Q ss_pred             EEEecccCCCC--CCCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           80 VFHIACPAPST--TVPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        80 vi~~a~~~~~~--~~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                      +|||||.....  ...+.|+..+++|+.++..+++++.++   +-.+||++||..+..+.++                  
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~------------------  143 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSAD------------------  143 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSS------------------
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCC------------------
Confidence            99999975432  122346788999999999999988653   2369999999887665432                  


Q ss_pred             ccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHH
Q 020924          155 RTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDV  231 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  231 (319)
                         ...|+.||.+...+.+.++.+   +|++++.|.||.+.++...... .......+.....      +...+..++|+
T Consensus       144 ---~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~-~~~~~~~~~~~~~------PlgR~g~peei  213 (242)
T 4b79_A          144 ---RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK-ADVEATRRIMQRT------PLARWGEAPEV  213 (242)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C-CCHHHHHHHHHTC------TTCSCBCHHHH
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc-CCHHHHHHHHhcC------CCCCCcCHHHH
Confidence               466999999999888877654   4899999999999888644321 1223334444433      34567899999


Q ss_pred             HHHHHHhhccCCC--Cc-eEEEec
Q 020924          232 AEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       232 a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      |.++++++.....  .| .+.++|
T Consensus       214 A~~v~fLaSd~a~~iTG~~l~VDG  237 (242)
T 4b79_A          214 ASAAAFLCGPGASFVTGAVLAVDG  237 (242)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCccCceEEECc
Confidence            9999999975432  44 445554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.94  E-value=1.2e-25  Score=188.38  Aligned_cols=211  Identities=19%  Similarity=0.163  Sum_probs=154.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+++||||+|+||++++++|+++|++|++++|+.... ....+++...+.++.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999975432 22223333234578999999999999888765      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||.......    .+.+...+++|+.++.++++++.+.    + ++||++||..++.+.+           
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-----------  150 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVR-----------  150 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCT-----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCC-----------
Confidence             68999999997543211    1234667899999999999988643    5 7999999987665432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                ....|+.||.+.+.+.+.++.+   +|++++.++||.+.++.......  .. ........+   +  ..
T Consensus       151 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~---~--~~  212 (247)
T 2jah_A          151 ----------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH--TA-TKEMYEQRI---S--QI  212 (247)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC--HH-HHHHHHHHT---T--TS
T ss_pred             ----------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc--hh-hHHHHHhcc---c--cc
Confidence                      1466999999999888877654   48999999999998875432111  11 111111111   1  11


Q ss_pred             ccccHHHHHHHHHHhhccCC
Q 020924          224 MIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~  243 (319)
                      .+++++|+|+++++++..+.
T Consensus       213 ~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          213 RKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             CCBCHHHHHHHHHHHHHSCT
T ss_pred             CCCCHHHHHHHHHHHhCCCc
Confidence            15899999999999998653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.94  E-value=3.3e-26  Score=198.72  Aligned_cols=218  Identities=16%  Similarity=0.070  Sum_probs=147.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC--CCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS--ENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+.. .....+...+  .++.++.+|++|.+++.++++     
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSID-KALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999865422 2222222222  278999999999999988875     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCCCCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----------KVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                        .+|+||||||......    ..+.+...+++|+.|+.++++++.+.          +.++||++||.+++.+.+.   
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~---  161 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS---  161 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS---
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC---
Confidence              5699999999754321    12334678999999999999988754          2458999999887765431   


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC--
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG--  214 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~--  214 (319)
                                        ...|+.||.+.+.+++.++.+   .|+++++++||.|.++........ ...+.......  
T Consensus       162 ------------------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~  222 (319)
T 3ioy_A          162 ------------------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIR-PDALKGEVKPVDK  222 (319)
T ss_dssp             ------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------
T ss_pred             ------------------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccC-chhhcccccchhH
Confidence                              466999999777766665443   489999999999998764322111 11111000000  


Q ss_pred             -ccc-cCCcccccccHHHHHHHHHHhhccCC
Q 020924          215 -YES-LENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       215 -~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                       ... ........++++|+|+.++.+++.+.
T Consensus       223 ~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          223 TAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             ------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence             000 11111223899999999999998753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=1.1e-25  Score=188.30  Aligned_cols=200  Identities=15%  Similarity=0.159  Sum_probs=153.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      +|+||||||+|+||++++++|+++|+       +|++++|+.... .....++...+.++.++.+|++|.+++..+++  
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL-EKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH-HHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHH-HHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999999       999999975432 12222232234578999999999999988775  


Q ss_pred             -----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcc
Q 020924           76 -----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                           .+|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+       
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------  153 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR-------  153 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC-------
Confidence                 5899999999754321    1223467889999999999999854    3667999999987665332       


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                    +...|+.||.+.+.+++.++.+   +|++++++|||.++|+........                 
T Consensus       154 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------  202 (244)
T 2bd0_A          154 --------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------------  202 (244)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------------
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc-----------------
Confidence                          1566999999999998877643   589999999999999865322100                 


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                       ....+++++|+|++++.++..+..
T Consensus       203 -~~~~~~~~~dva~~~~~l~~~~~~  226 (244)
T 2bd0_A          203 -MQALMMMPEDIAAPVVQAYLQPSR  226 (244)
T ss_dssp             -TGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             -ccccCCCHHHHHHHHHHHHhCCcc
Confidence             012578999999999999986543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.94  E-value=2e-26  Score=195.94  Aligned_cols=229  Identities=15%  Similarity=0.067  Sum_probs=164.3

Q ss_pred             CCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+||||||+  |+||++++++|+++|++|++++|+..  ....++++.....++.++.+|++|.+++.++++     
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR--FKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG--GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh--hHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            568999999999  99999999999999999999999844  223333333333468899999999999998875     


Q ss_pred             --CcceEEEecccCCC----C-----CCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPS----T-----TVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~----~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        .+|++|||||....    .     ...+.+...+++|+.++.++++++.+..  .++||++||..++.+.+.      
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------  163 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN------  163 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT------
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC------
Confidence              57999999997542    1     1122346788999999999999998762  348999999877654431      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.||.+.+.+++.++.+   .|++++.++||.+.++..... ..............     
T Consensus       164 ---------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~-----  222 (271)
T 3ek2_A          164 ---------------YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNS-----  222 (271)
T ss_dssp             ---------------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHS-----
T ss_pred             ---------------ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcC-----
Confidence                           466999999999999888765   489999999999998764432 11122222222222     


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCc-eEEEec-ccCCHHHHH
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA-HMIRARDLV  261 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s~~e~~  261 (319)
                       ....+.+++|+|+++++++....  ..| .++++| ...++.++.
T Consensus       223 -~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          223 -PLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             -TTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             -CcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence             34567899999999999998643  345 566764 555554443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.94  E-value=6.3e-26  Score=190.58  Aligned_cols=209  Identities=17%  Similarity=0.142  Sum_probs=152.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+.+..            ..+.++.+|++|.++++++++      
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------EGFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------ccceEEEecCCCHHHHHHHHHHHHHHc
Confidence            46678999999999999999999999999999999976532            236889999999999888775      


Q ss_pred             -CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+           
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------  154 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA-----------  154 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC-----------
Confidence             369999999975432    12344578899999999999998764    3667999999976654321           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                ....|+.+|.+.+.+++.++.+   .++++++++|+.+.++......   ..........      ....
T Consensus       155 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~------~p~~  215 (253)
T 2nm0_A          155 ----------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---DEQRANIVSQ------VPLG  215 (253)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTT------CTTC
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---HHHHHHHHhc------CCCC
Confidence                      1456999999999999887765   4899999999999877532110   0111111111      1334


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+++++|+|+++++++..+.  ..| .+.++|
T Consensus       216 ~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG  247 (253)
T 2nm0_A          216 RYARPEEIAATVRFLASDDASYITGAVIPVDG  247 (253)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence            58899999999999997643  244 456655

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.94  E-value=1.5e-25  Score=191.36  Aligned_cols=219  Identities=14%  Similarity=0.083  Sum_probs=163.0

Q ss_pred             CCCCeEEEeCcchH--HHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGF--LASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+|+||||+|+  ||++++++|+++|++|++++|+....   .++++.....++.++.+|++|.+++.++++     
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKD---RVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHH---HHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHH---HHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            66799999999966  99999999999999999999987322   333333333568999999999999988775     


Q ss_pred             --CcceEEEecccCCCC---------CCCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCc
Q 020924           76 --GCNGVFHIACPAPST---------TVPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~---------~~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                        .+|+||||||.....         ...+.+...+++|+.++.++++++...   ...+||++||.+++.+.+      
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------  174 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP------  174 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC------
Confidence              469999999976431         112234668899999999999999764   346999999987765432      


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                     ....|+.||.+.+.+++.++.+   +|++++.++||.+.++...... .............    
T Consensus       175 ---------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----  234 (280)
T 3nrc_A          175 ---------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-NFKKMLDYNAMVS----  234 (280)
T ss_dssp             ---------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-THHHHHHHHHHHS----
T ss_pred             ---------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-chHHHHHHHHhcC----
Confidence                           1567999999999999887665   5899999999999987644321 1122333332222    


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                        ....+.+++|+|+++++++....  ..| .++++|
T Consensus       235 --p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          235 --PLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             --TTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             --CCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECC
Confidence              34567899999999999998543  344 566765

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=3.4e-26  Score=194.78  Aligned_cols=226  Identities=17%  Similarity=0.116  Sum_probs=160.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++|+|+||||+|+||++++++|++ +|++|++++|+.+.. .....++...+.++.++.+|++|.+++..+++      
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRG-QAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHH-HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHH-HHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999 999999999975432 22223333334578999999999999988876      


Q ss_pred             -CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCC-------CCc
Q 020924           76 -GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVAVGLNPRWP-------KGQ  141 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~~~~~~~~~-------~~~  141 (319)
                       .+|+||||||........    +.+...+++|+.++.++++++.+...  ++||++||..++++.+...       ...
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence             789999999976433211    22366799999999999999987632  4999999987765311000       001


Q ss_pred             ccCCCCCCC-------------ccccccCCchHHhhHHHHHHHHHHhhhh-------CCceEEEEecCcccCCCCCCCCC
Q 020924          142 IMDETCWSD-------------KEYCRTTNNWYCLSKTEAESEALEFGKK-------TGLDVVTICPNLVLGPLLQSKVN  201 (319)
Q Consensus       142 ~~~E~~~~~-------------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~~lrp~~v~G~~~~~~~~  201 (319)
                      +++|+++..             ...+..+.+.|+.||.+.+.+++.++.+       .+++++.++||.+.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            122211000             0000112477999999999999887665       48999999999998875321   


Q ss_pred             ccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC----CCceEEEecc
Q 020924          202 TSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE----AEGRYICTAH  253 (319)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~  253 (319)
                                           ..+.+++|+|+++++++..+.    ..|.|+..+.
T Consensus       238 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~  272 (276)
T 1wma_A          238 ---------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR  272 (276)
T ss_dssp             ---------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTE
T ss_pred             ---------------------cccCChhHhhhhHhhhhcCcccccccCceEeccCc
Confidence                                 136799999999999997552    2455544433

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-26  Score=196.82  Aligned_cols=202  Identities=16%  Similarity=0.137  Sum_probs=153.9

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|+|+||||+|+||++++++|+++|++|++++|+.... .....++...+.++.++.+|++|.+++.++++     
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL-EETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHH-HHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            457789999999999999999999999999999999976432 22223333334578999999999998888775     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        ++|+||||||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+          
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  175 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP----------  175 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH----------
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC----------
Confidence              68999999997643211    12235788999999888877775    35678999999987654321          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC------CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT------GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                 +...|+.+|.+.+.+++.++.++      |++++++||+.+.++.....    .               
T Consensus       176 -----------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~----~---------------  225 (272)
T 1yb1_A          176 -----------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----S---------------  225 (272)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----H---------------
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc----c---------------
Confidence                       14669999999999998887653      89999999999998763210    0               


Q ss_pred             CcccccccHHHHHHHHHHhhccCC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      .....+++++|+|++++.++..+.
T Consensus       226 ~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          226 TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             ccccCCCCHHHHHHHHHHHHHcCC
Confidence            012357899999999999998653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.94  E-value=1.4e-25  Score=192.35  Aligned_cols=220  Identities=15%  Similarity=0.127  Sum_probs=157.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-ccCCCeEEEEccCCC----hhhHHHHhc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-KASENLKLFKADLLD----YDSVKSAIV   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~----~~~~~~~~~   75 (319)
                      |+|++|++|||||+|+||++++++|+++|++|++++|+..........++. ..+.++.++.+|++|    .+++.++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            347789999999999999999999999999999999987222222223332 224578999999999    888887765


Q ss_pred             -------CcceEEEecccCCCCCC------C--------CccchhhhhHHHHHHHHHHHHHhC----C------CCEEEE
Q 020924           76 -------GCNGVFHIACPAPSTTV------P--------NPQMELLEPAVKGTLNVVKACLEA----K------VKRVIV  124 (319)
Q Consensus        76 -------~~d~vi~~a~~~~~~~~------~--------~~~~~~~~~Nv~~~~~l~~~~~~~----~------~~~iv~  124 (319)
                             .+|+||||||.......      .        +.+...+++|+.++.++++++.+.    +      .++||+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence                   68999999997543211      1        123567899999999999998754    2      459999


Q ss_pred             eccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC
Q 020924          125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN  201 (319)
Q Consensus       125 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~  201 (319)
                      +||..++.+.+                     +...|+.||.+.+.+++.++.+   +|+++++++||.++++. . .  
T Consensus       179 isS~~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--  233 (288)
T 2x9g_A          179 LCDAMVDQPCM---------------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--  233 (288)
T ss_dssp             ECCTTTTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--
T ss_pred             EecccccCCCC---------------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--
Confidence            99987654332                     1466999999999888887665   38999999999999986 3 1  


Q ss_pred             ccHHHHHHHHhcCccccCCccccc-ccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          202 TSSLVLIKLLKEGYESLENKLRMI-VDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      . ...........      ....+ .+++|+|+++++++....  ..| .+.+.|
T Consensus       234 ~-~~~~~~~~~~~------p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          234 G-EEEKDKWRRKV------PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDG  281 (288)
T ss_dssp             C-HHHHHHHHHTC------TTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C-hHHHHHHHhhC------CCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence            1 22222222222      22345 799999999999997532  244 445654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.94  E-value=2.9e-26  Score=190.92  Aligned_cols=223  Identities=11%  Similarity=0.036  Sum_probs=165.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|+++||||++.||++++++|+++|++|++.+|+.+. .....+++...+.++..+.+|++|+++++++++      
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~-~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL-LAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH-HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            4789999999999999999999999999999999997653 233444554456688999999999999988764      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|++|||||......    ..+.|+..+++|+.++..+++++.+.     +..+||++||..+..+.++         
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~---------  155 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT---------  155 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT---------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC---------
Confidence             4799999999765432    23446788999999999999887532     4469999999887665432         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.||.+...+.+.++.+   +|+++..|.||.+.++....... ............      +.
T Consensus       156 ------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~------Pl  216 (255)
T 4g81_D          156 ------------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-DKQFDSWVKSST------PS  216 (255)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-CHHHHHHHHHHS------TT
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-CHHHHHHHHhCC------CC
Confidence                        466999999999888877655   48999999999998775321100 011112222222      34


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ..+..++|+|.++++++.....  .| .+.++|.
T Consensus       217 ~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          217 QRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            5678999999999999975432  44 4566654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.94  E-value=3.6e-26  Score=192.69  Aligned_cols=220  Identities=22%  Similarity=0.232  Sum_probs=157.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA-KAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999976432 12223332234578899999999999988876       68


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |+||||||......    ..+.++..+++|+.++.++++++.+.    + .++||++||..++.+.+.            
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  148 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------  148 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC------------
Confidence            99999999654321    12234668999999999988888653    4 579999999877654321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc--------cHHHHHHHHhcCccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT--------SSLVLIKLLKEGYES  217 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~  217 (319)
                               ...|+.||.+.+.+++.++.+   +|+++++++||.+.++........        ..........     
T Consensus       149 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  214 (256)
T 1geg_A          149 ---------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK-----  214 (256)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT-----
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHh-----
Confidence                     456999999999999887754   489999999999988642100000        0000001110     


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       ......+.+++|+|+++++++....  ..| .+.++|
T Consensus       215 -~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          215 -RITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  251 (256)
T ss_dssp             -TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             -cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence             1134568999999999999997542  244 456655

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.94  E-value=1.9e-25  Score=189.37  Aligned_cols=228  Identities=17%  Similarity=0.161  Sum_probs=161.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...  ...+.++.+|+++.+.+.++++   
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g   84 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENV-NETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP   84 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence            446679999999999999999999999999999999986542 2222333222  3457889999999999888876   


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+            
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  152 (267)
T 3t4x_A           85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ------------  152 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC------------
Confidence            68999999997654321    223456789999998888777654    4567999999987765432            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCC--------CCCccHHHHHHHHhcCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQS--------KVNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~  216 (319)
                               +...|+.||.+.+.+++.++.++   |++++.++||.+.++....        ................. 
T Consensus       153 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  222 (267)
T 3t4x_A          153 ---------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR-  222 (267)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC-
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC-
Confidence                     15679999999999999887664   7999999999998763110        00001111111111110 


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       .....+.+.+++|+|+++++++....  ..| .++++|
T Consensus       223 -~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  260 (267)
T 3t4x_A          223 -PTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDG  260 (267)
T ss_dssp             -TTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CcccccCccCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence             01135678999999999999997543  244 567765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.94  E-value=5.2e-26  Score=193.07  Aligned_cols=209  Identities=18%  Similarity=0.133  Sum_probs=147.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++   ..++.++.+|++|.+++.++++       
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDAL-QETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999976532 1222222   3578999999999999988876       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----C--CCEEEEeccccccccCCCCCCCcccC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----K--VKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                      .+|+||||||.....     ...+.+...+++|+.++.++++++.+.    +  .++||++||..++.+.+         
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~---------  172 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP---------  172 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT---------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC---------
Confidence            689999999975431     112334678999999999999888643    2  46999999987765442         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +...|+.||.+.+.+++.++.+   ++++++.++||.+.++........    .....      ....
T Consensus       173 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~------~~~~  230 (272)
T 4dyv_A          173 ------------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQAD------LSIK  230 (272)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chhhh------hccc
Confidence                        1566999999999999888765   489999999999988753321100    00000      0113


Q ss_pred             ccccccHHHHHHHHHHhhccCCCCc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEAEG  246 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~~~  246 (319)
                      ...+++++|+|+++++++..+....
T Consensus       231 ~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          231 VEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             -----CHHHHHHHHHHHHHSCTTSC
T ss_pred             ccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            4458899999999999999776533

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.94  E-value=8.1e-26  Score=191.71  Aligned_cols=210  Identities=20%  Similarity=0.251  Sum_probs=157.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCC---CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRD---YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      ++++|+||||||+|+||++++++|+++|   ++|++++|+.....  .+.++.....++.++.+|++|.+++.++++   
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~--~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK--ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH--HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH--HHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            3678899999999999999999999999   99999999876432  233332224579999999999999988876   


Q ss_pred             ------CcceEEEecccCC-CC----CCCCccchhhhhHHHHHHHHHHHHHhC----------C-----CCEEEEecccc
Q 020924           76 ------GCNGVFHIACPAP-ST----TVPNPQMELLEPAVKGTLNVVKACLEA----------K-----VKRVIVVSSGV  129 (319)
Q Consensus        76 ------~~d~vi~~a~~~~-~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----------~-----~~~iv~~SS~~  129 (319)
                            .+|+||||||... ..    ...+.+...+++|+.++.++++++.+.          +     .++||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence                  6999999999765 21    112234668899999999999998654          2     46999999987


Q ss_pred             ccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHH
Q 020924          130 AVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLV  206 (319)
Q Consensus       130 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~  206 (319)
                      ++.+.+.                  ..+...|+.+|.+.+.+++.++.+   ++++++++|||.+.++....        
T Consensus       176 ~~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------  229 (267)
T 1sny_A          176 GSIQGNT------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------  229 (267)
T ss_dssp             GCSTTCC------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------
T ss_pred             ccccCCC------------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------
Confidence            6654310                  012466999999999999988765   58999999999998775321        


Q ss_pred             HHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCceEE-EecccC
Q 020924          207 LIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEGRYI-CTAHMI  255 (319)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~-~~~~~~  255 (319)
                                      ..++.++|+|+.++.++....  ..|.|+ ..|..+
T Consensus       230 ----------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ----------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ----------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ----------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                            124789999999999997543  245453 344443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=2e-25  Score=193.70  Aligned_cols=226  Identities=16%  Similarity=0.132  Sum_probs=161.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh----------h-hHHHHHhhhccCCCeEEEEccCCChhhHH
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD----------E-KNARLYELEKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+...          . .......+...+.++.++.+|++|.+++.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            677999999999999999999999999999999886321          1 11222233333567899999999999998


Q ss_pred             HHhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCC
Q 020924           72 SAIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----K-VKRVIVVSSGVAVGLNP  135 (319)
Q Consensus        72 ~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~  135 (319)
                      ++++       .+|+||||||......    ..+.+...+++|+.++.++++++.+.    + ..+||++||..++.+.+
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~  203 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP  203 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence            8775       6899999999765322    12335678899999999999998643    2 46899999987766543


Q ss_pred             CCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC----------CCc
Q 020924          136 RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK----------VNT  202 (319)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~----------~~~  202 (319)
                      .                     ...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....          ...
T Consensus       204 ~---------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  262 (317)
T 3oec_A          204 G---------------------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENP  262 (317)
T ss_dssp             T---------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSC
T ss_pred             C---------------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcccc
Confidence            1                     466999999999999988766   489999999999998742210          000


Q ss_pred             cHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          203 SSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ...........    .....+.|++++|+|+++++++....  ..| .++++|.
T Consensus       263 ~~~~~~~~~~~----~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          263 TREDAAELFSQ----LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             CHHHHHHHHTT----TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhHHHHHHhh----hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence            00000111100    11122678999999999999997543  234 5677653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=2.5e-26  Score=194.86  Aligned_cols=229  Identities=16%  Similarity=0.107  Sum_probs=156.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||+|+||++++++|+++|++|++++|+..... ....++...  +.++.++.+|++|.+++.++++     
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV-QCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999764321 122222211  2468899999999999988775     


Q ss_pred             --CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHH----hCC---CCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACL----EAK---VKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~---~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|+||||||....    +.+...+++|+.++..+.+++.    +.+   .++||++||..++.+.+           
T Consensus        84 ~g~id~lv~~Ag~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  148 (267)
T 2gdz_A           84 FGRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA-----------  148 (267)
T ss_dssp             HSCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------
T ss_pred             cCCCCEEEECCCCCCh----hhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC-----------
Confidence              47999999997532    4457899999997776666554    332   57999999987665432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhh-----hhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHh-cCccccCC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFG-----KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK-EGYESLEN  220 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-----~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~  220 (319)
                                +...|+.||.+.+.+++.++     ...|+++++++||.+.++.......  ......... ......+.
T Consensus       149 ----------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~  216 (267)
T 2gdz_A          149 ----------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK--EENMGQYIEYKDHIKDMI  216 (267)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC--HHHHGGGGGGHHHHHHHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccc--ccccchhhhHHHHHHHHh
Confidence                      14569999999999888642     2358999999999998764211000  000000000 00000000


Q ss_pred             cccccccHHHHHHHHHHhhccCCCCc-eEEEec-ccCCHHH
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAEAEG-RYICTA-HMIRARD  259 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~-~~~s~~e  259 (319)
                      ....+++++|+|+++++++......| .+++++ ...++.|
T Consensus       217 ~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          217 KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            22347899999999999998765555 566664 5555443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=8.5e-26  Score=192.70  Aligned_cols=212  Identities=14%  Similarity=0.066  Sum_probs=152.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+... ....++... ...+.++.+|++|.+++.++++      
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLD-AAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56799999999999999999999999999999999865321 222222211 2335899999999999888775      


Q ss_pred             -CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----C--CCEEEEeccccccccCCCCCCCccc
Q 020924           76 -GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----K--VKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                       .+|+||||||.....     ...+.++..+++|+.++.++++++.+.    +  .++||++||..++.+.+        
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~--------  181 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP--------  181 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT--------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC--------
Confidence             579999999975431     112334668999999999988887643    2  46999999987765432        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   +...|+.||.+.+.+++.++.+   +|++++.++||.+.++.....           ..........
T Consensus       182 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-----------~~~~~~~~~~  237 (281)
T 4dry_A          182 -------------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM-----------STGVLQANGE  237 (281)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSC
T ss_pred             -------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh-----------cchhhhhhhc
Confidence                         1567999999999999888755   589999999999987753211           0111001111


Q ss_pred             -cccccccHHHHHHHHHHhhccCCCCce
Q 020924          221 -KLRMIVDVRDVAEALLLAYEKAEAEGR  247 (319)
Q Consensus       221 -~~~~~i~v~D~a~~~~~~~~~~~~~~~  247 (319)
                       ....++.++|+|+++++++..+....+
T Consensus       238 ~~~~~~~~pedvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          238 VAAEPTIPIEHIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             EEECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             ccccCCCCHHHHHHHHHHHhCCCccCcc
Confidence             334578999999999999998766544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=8.1e-26  Score=187.98  Aligned_cols=197  Identities=20%  Similarity=0.125  Sum_probs=139.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |+.++|+|+||||+|+||++++++|+++|++|++++|+..... ....++    .++.++.+|++|.+++.++++     
T Consensus         1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (234)
T 2ehd_A            1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ-ALAAEL----EGALPLPGDVREEGDWARAVAAMEEA   75 (234)
T ss_dssp             ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh----hhceEEEecCCCHHHHHHHHHHHHHH
Confidence            7766789999999999999999999999999999999754321 111221    368899999999998887765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|+|||+||......    ..+.+...+++|+.++.++++.+    ++.+.++||++||..++.+.+          
T Consensus        76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  145 (234)
T 2ehd_A           76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFK----------  145 (234)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCT----------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCC----------
Confidence              6799999999654321    11234678899999998666655    455678999999977654321          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 +...|+.+|.+.+.+++.++.+   +|++++++|||.+.++.....    .        .       . 
T Consensus       146 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~--------~-------~-  194 (234)
T 2ehd_A          146 -----------GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P--------G-------Q-  194 (234)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------------
T ss_pred             -----------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c--------c-------c-
Confidence                       1466999999999888877654   489999999999987643210    0        0       0 


Q ss_pred             cccccHHHHHHHHHHhhccCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ..+++++|+|+++++++..+.
T Consensus       195 ~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          195 AWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             ---CCHHHHHHHHHHHHHSCC
T ss_pred             cCCCCHHHHHHHHHHHhCCCc
Confidence            015799999999999998654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.94  E-value=3.5e-25  Score=186.55  Aligned_cols=223  Identities=16%  Similarity=0.170  Sum_probs=164.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG------   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   76 (319)
                      +++|+++||||+|+||++++++|+++|++|+++.++..........++...+.++.++.+|++|.++++.+++.      
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999766555444444444544456788999999999888877642      


Q ss_pred             -------cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCccc
Q 020924           77 -------CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        77 -------~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                             +|++|||||......    ..+.+...+++|+.++.++++++.+.  +.++||++||..++.+.+.       
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  157 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD-------  157 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT-------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC-------
Confidence                   899999999754321    11224567899999999999999876  3458999999877654431       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.||.+.+.+++.++.+   .+++++.++||.+.++........ ..........      .
T Consensus       158 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~------~  216 (255)
T 3icc_A          158 --------------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD-PMMKQYATTI------S  216 (255)
T ss_dssp             --------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS-HHHHHHHHHT------S
T ss_pred             --------------cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc-HHHHHhhhcc------C
Confidence                          466999999999999888765   489999999999998865433211 1111111111      1


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ..+.+.+++|+|+++++++....  ..| .++++|.
T Consensus       217 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          217 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence            34668899999999999996543  244 5566653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.94  E-value=8.9e-26  Score=187.66  Aligned_cols=199  Identities=19%  Similarity=0.134  Sum_probs=147.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |.+|++|||||+|+||++++++|+++|++|++++|+.+... .....+   ..++.++.+|++|.++++++++       
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQ-QQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            44689999999999999999999999999999999865321 122222   2368999999999999888775       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .+|++|||||......    ..+.+...+++|+.++.++++++...   ...+||++||..++.+.+.            
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  144 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKAN------------  144 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSS------------
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCC------------
Confidence            5799999999754321    22335678999999999999998653   1239999999877665431            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.||.+.+.+++.++.+   .|++++.++||.+.++.......                  .....+
T Consensus       145 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------------~~~~~~  197 (235)
T 3l6e_A          145 ---------ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------------VDPSGF  197 (235)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------C
T ss_pred             ---------CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------------CCCcCC
Confidence                     466999999999999988765   48999999999998775322100                  012257


Q ss_pred             ccHHHHHHHHHHhhccCCC
Q 020924          226 VDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~  244 (319)
                      ++++|+|+++++++..+..
T Consensus       198 ~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          198 MTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             BCHHHHHHHHHHHTCCCSS
T ss_pred             CCHHHHHHHHHHHHhCCCC
Confidence            8999999999999987654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-25  Score=190.76  Aligned_cols=223  Identities=20%  Similarity=0.185  Sum_probs=159.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+++||||+|+||++++++|+++|++|++++|+.+... ....++    .++.++.+|++|.++++++++       
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR-ALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999999754321 111222    357899999999999988775       


Q ss_pred             CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|+||||||......     ..+.++..+++|+.++.++++++.+.   +.++||++||..+..+.+.           
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  150 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ-----------  150 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT-----------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC-----------
Confidence            6899999999754211     11224678899999999999998742   3469999999877665431           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccccCCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                ...|+.+|.+.+.+++.++.+   +|+++++++||.++++.....   .......+.......      .
T Consensus       151 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------p  214 (270)
T 1yde_A          151 ----------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ------P  214 (270)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS------T
T ss_pred             ----------CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcC------C
Confidence                      456999999999999988754   589999999999998742110   000011111111111      3


Q ss_pred             ccccccHHHHHHHHHHhhccCC-CCc-eEEEec-ccCCH
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE-AEG-RYICTA-HMIRA  257 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~~-~~~s~  257 (319)
                      ...+.+++|+|+++++++.... ..| .+.++| .....
T Consensus       215 ~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~  253 (270)
T 1yde_A          215 LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGY  253 (270)
T ss_dssp             TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC
T ss_pred             CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeeccc
Confidence            3457899999999999987522 244 566665 44443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.94  E-value=3.5e-25  Score=192.91  Aligned_cols=217  Identities=15%  Similarity=0.101  Sum_probs=158.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEE-cCCChhhHHHHHhhh-ccCCCeEEEEccCCChh------------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTA-REPSDEKNARLYELE-KASENLKLFKADLLDYD------------   68 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~------------   68 (319)
                      |++|++|||||+|+||++++++|+++|++|++++ |+.... ....+++. ..+.++.++.+|++|.+            
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEA-NALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            6778999999999999999999999999999999 875432 22222222 22457899999999998            


Q ss_pred             -----hHHHHhc-------CcceEEEecccCCCCCC------------------CCccchhhhhHHHHHHHHHHHHHh--
Q 020924           69 -----SVKSAIV-------GCNGVFHIACPAPSTTV------------------PNPQMELLEPAVKGTLNVVKACLE--  116 (319)
Q Consensus        69 -----~~~~~~~-------~~d~vi~~a~~~~~~~~------------------~~~~~~~~~~Nv~~~~~l~~~~~~--  116 (319)
                           ++.++++       .+|+||||||.......                  .+.+...+++|+.++.++++++.+  
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 8887765       68999999997543211                  122356789999999999998864  


Q ss_pred             --CC------CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEE
Q 020924          117 --AK------VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVT  185 (319)
Q Consensus       117 --~~------~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~  185 (319)
                        .+      .++||++||..++.+.+                     ....|+.||.+.+.+++.++.+   +|++++.
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~~~~---------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~  261 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQPLL---------------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNG  261 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HhcCCcCCCCCcEEEEECchhhccCCC---------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence              34      57999999987655432                     1466999999999999888765   3899999


Q ss_pred             EecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc-ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          186 ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR-MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       186 lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      |+||.+.++. ..    ............      ... .+.+++|+|+++++++....  ..| .+.++|
T Consensus       262 v~PG~v~T~~-~~----~~~~~~~~~~~~------p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  321 (328)
T 2qhx_A          262 VGPGLSVLVD-DM----PPAVWEGHRSKV------PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  321 (328)
T ss_dssp             EEESSBSCCC-CS----CHHHHHHHHTTC------TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             EecCcccCCc-cc----cHHHHHHHHhhC------CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            9999999886 21    122323322221      223 57899999999999997532  244 456665

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.94  E-value=3.3e-26  Score=193.41  Aligned_cols=227  Identities=11%  Similarity=0.073  Sum_probs=158.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|.....  ......++...+.++.++.+|++|.+++.++++   
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            346779999999999999999999999999999998865432  122233333345678999999999999988775   


Q ss_pred             ----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 ----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                          .+|++|||||......    ..+.+...+++|+.++.++++++.+.  +.++||++||..++.+.+.         
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~---------  157 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF---------  157 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC---------
Confidence                5899999999764432    12334677889999999999999876  4468999999877665432         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.||.+.+.+++.++.++   |++++.++||.+.++.......  ........      .....
T Consensus       158 ------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~------~~~~~  217 (262)
T 3ksu_A          158 ------------YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET--KESTAFHK------SQAMG  217 (262)
T ss_dssp             ------------CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------------CC
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc--hHHHHHHH------hcCcc
Confidence                        3459999999999999888764   8999999999997764221100  00000000      11145


Q ss_pred             cccccHHHHHHHHHHhhccCC-CCc-eEEEecccCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAE-AEG-RYICTAHMIR  256 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~~~~~s  256 (319)
                      +.+.+++|+|+++++++.... ..| .+.++|....
T Consensus       218 ~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          218 NQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             CCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred             cCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccC
Confidence            568899999999999998622 244 5577765443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=9.9e-26  Score=190.51  Aligned_cols=217  Identities=18%  Similarity=0.153  Sum_probs=160.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+++||||||+||++++++|+++|++|++++|+.+.. ....+++   ..++.++.+|++|.+++.++++      
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL-AEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            37889999999999999999999999999999999985432 1122222   2468899999999999888775      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                       .+|+||||||.......    .+.++..+++|+.++.++++++.+..  .++||++||..++ +.+             
T Consensus        79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~-------------  144 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF-------------  144 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH-------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC-------------
Confidence             46999999997543211    12246678999999999999998753  3599999998765 321             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                              ....|+.||.+.+.+++.++.+   +|+++++++||.+.++.....   ............      ....+
T Consensus       145 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~~~~  207 (263)
T 2a4k_A          145 --------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGAS------PLGRA  207 (263)
T ss_dssp             --------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTS------TTCSC
T ss_pred             --------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcC------CCCCC
Confidence                    1456999999999888887654   489999999999998864321   122222222222      23457


Q ss_pred             ccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          226 VDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ++++|+|+++++++....  ..| .+.++|.
T Consensus       208 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          208 GRPEEVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            899999999999997543  244 4566653

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=6.7e-26  Score=193.78  Aligned_cols=219  Identities=17%  Similarity=0.187  Sum_probs=158.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC---eEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc--
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY---FVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      +++|++|||||+|+||++++++|+++|+   +|++++|+.+.. ....+++..  .+.++.++.+|++|.++++++++  
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHH-HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            5679999999999999999999999887   999999986542 122222221  13568899999999999998876  


Q ss_pred             -----CcceEEEecccCCCC-C----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCc
Q 020924           76 -----GCNGVFHIACPAPST-T----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~-~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                           .+|+||||||..... .    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.     
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~-----  184 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT-----  184 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-----
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC-----
Confidence                 479999999975421 1    123357789999999999999984    346679999999877654431     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                      ...|+.||.+.+.+++.++.+   +|++++.++||.+.++..................      
T Consensus       185 ----------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~------  242 (287)
T 3rku_A          185 ----------------GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK------  242 (287)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT------
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc------
Confidence                            566999999999999988776   5899999999999887421100001111111111      


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCC---CceEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEA---EGRYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  252 (319)
                         ....+.++|+|+++++++..+..   +..+++.+
T Consensus       243 ---~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          243 ---DTTPLMADDVADLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             ---TSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             ---ccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence               11235899999999999987654   22455554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-25  Score=189.07  Aligned_cols=220  Identities=16%  Similarity=0.083  Sum_probs=157.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.... ....+++   +.++.++.+|++|.+++.++++      
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG-QQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999875432 1122222   3578899999999999887765      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|+||||||......    ..+.+...+++|+.++.++++++.    +.+ ++||++||..++.+.+           
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-----------  146 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE-----------  146 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC-----------
Confidence             4699999999754321    122346788999998888777664    345 7999999987665432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---C--CceEEEEecCcccCCCCCC--CCCccHHHHHHHHhcCccccC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---T--GLDVVTICPNLVLGPLLQS--KVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~--~~~~~~lrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                +...|+.||.+.+.+++.++.+   +  |++++++||+.++++....  .....    ........  ..
T Consensus       147 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~--~~  210 (253)
T 1hxh_A          147 ----------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDP--KL  210 (253)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBT--TT
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhh----HHHHhhhh--cc
Confidence                      1466999999999999888765   3  8999999999999874221  00000    01011100  01


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .....+.+++|+|+++++++..+.  ..| .+.++|.
T Consensus       211 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          211 NRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             BTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            134568899999999999997643  234 4566654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.94  E-value=1.8e-25  Score=187.87  Aligned_cols=216  Identities=15%  Similarity=0.120  Sum_probs=156.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccC--CChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADL--LDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl--~~~~~~~~~~~----   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+... .....+... ..++.++.+|+  +|.+++.++++    
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLR-QVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999865422 122222211 23788999999  89988887765    


Q ss_pred             ---CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         .+|++|||||.....     ...+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.       
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------  161 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN-------  161 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT-------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC-------
Confidence               589999999974321     1112246789999999999999984    446679999999877654421       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCC--ceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG--LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                    ...|+.||.+.+.+++.++.+++  ++++.++||.+.++..           ......      ..
T Consensus       162 --------------~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------~~~~~~------~~  210 (252)
T 3f1l_A          162 --------------WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------ASAFPT------ED  210 (252)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------HHHCTT------CC
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------hhhCCc------cc
Confidence                          46699999999999999887653  8999999999976521           111111      12


Q ss_pred             ccccccHHHHHHHHHHhhccCCC--Cc-eEEEec-ccCCH
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA-HMIRA  257 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~-~~~s~  257 (319)
                      ...+.+++|+|.++++++.....  .| .+.++| ...++
T Consensus       211 ~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          211 PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred             hhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence            34578999999999999976532  34 456654 44433

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.94  E-value=7.4e-26  Score=191.38  Aligned_cols=213  Identities=15%  Similarity=0.121  Sum_probs=153.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|+++||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREAL-EKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            36779999999999999999999999999999999975432 22223333334578899999999998887765      


Q ss_pred             -CcceEEEecccC-CCC----CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPA-PST----TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~-~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|+||||||.. ...    ...+.+...+++|+.++.++++++.+.    +.++||++||..++.+.+.         
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  153 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN---------  153 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT---------
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC---------
Confidence             689999999975 221    112334678899999999999998753    5679999999877654321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC------------CCccHH-HHHH
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK------------VNTSSL-VLIK  209 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~------------~~~~~~-~~~~  209 (319)
                                  ...|+.||.+.+.+.+.++.+   +|+++++++||.+.++.....            ...... ....
T Consensus       154 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (262)
T 1zem_A          154 ------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQ  221 (262)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHH
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHH
Confidence                        456999999999888877654   489999999999977642110            000011 1111


Q ss_pred             HHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          210 LLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       210 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .....      ....+..++|+|+++++++...
T Consensus       222 ~~~~~------p~~r~~~p~dvA~~v~~l~s~~  248 (262)
T 1zem_A          222 MIGSV------PMRRYGDINEIPGVVAFLLGDD  248 (262)
T ss_dssp             HHHTS------TTSSCBCGGGSHHHHHHHHSGG
T ss_pred             HHhcC------CCCCCcCHHHHHHHHHHHcCch
Confidence            11111      3345789999999999999754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-25  Score=191.39  Aligned_cols=212  Identities=18%  Similarity=0.195  Sum_probs=148.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+||||||+|+||++++++|+++|++|++++|+..... ....++...  ..++.++.+|++|.+++.++++     
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE-ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHH-HHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999999999754321 122222211  2457889999999999888775     


Q ss_pred             --CcceEEEecccCCCCCC----CCccchhhhhHHHH----HHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPSTTV----PNPQMELLEPAVKG----TLNVVKACLEAKV--KRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~----~~~l~~~~~~~~~--~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        ++|+||||||.......    .+.+...+++|+.+    +..++..+++.+.  ++||++||..++...+        
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~--------  180 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP--------  180 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS--------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCC--------
Confidence              68999999997543221    12346788999999    6666666677665  7999999976542111        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                 ..+...|+.+|.+.+.+++.++.+     .++++++++|+.+.++............+..   .     
T Consensus       181 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~-----  241 (279)
T 1xg5_A          181 -----------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA---T-----  241 (279)
T ss_dssp             -----------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH---H-----
T ss_pred             -----------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh---h-----
Confidence                       012467999999999888877643     4799999999999876421000000000000   0     


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                       .....+++++|+|+++++++..+.
T Consensus       242 -~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          242 -YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             -HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             -cccccCCCHHHHHHHHHHHhcCCc
Confidence             022347899999999999998654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.94  E-value=3.9e-25  Score=183.97  Aligned_cols=202  Identities=19%  Similarity=0.137  Sum_probs=153.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-ccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-KASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +||++|||||+|+||++++++|+++|++|++++|+.+... ....++. ..+.++.++.+|++|.+++.++++       
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLE-KIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999865422 1222221 224678999999999999998876       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .+|++|||||......    ..+.+...+++|+.++.++++++.+.   +.+++|++||.....+.+.            
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------------  147 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY------------  147 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT------------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC------------
Confidence            6899999999765432    12334678999999999999998753   3458888888766544321            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh-CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK-TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                               ...|+.+|.+.+.+++.+..+ .+++++.++||.+.++.......                 ......+++
T Consensus       148 ---------~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~-----------------~~~~~~~~~  201 (235)
T 3l77_A          148 ---------GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG-----------------KPKEKGYLK  201 (235)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC-----------------CCGGGTCBC
T ss_pred             ---------cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC-----------------cccccCCCC
Confidence                     456999999999999987443 48999999999998875432211                 001225789


Q ss_pred             HHHHHHHHHHhhccCCC
Q 020924          228 VRDVAEALLLAYEKAEA  244 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~  244 (319)
                      ++|+|+++++++..+..
T Consensus       202 p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          202 PDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHcCCCC
Confidence            99999999999987654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.94  E-value=1.1e-25  Score=188.36  Aligned_cols=212  Identities=20%  Similarity=0.190  Sum_probs=157.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----C
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----G   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~   76 (319)
                      .+||++|||||+|+||++++++|++ .|+.|++.+|+....           ...+.++.+|++|.+++.++++     .
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence            4678999999999999999999998 789999999876521           2467899999999999998876     6


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +|++|||||......    ..+.+...+++|+.++.++++++.+...  ++||++||..++.+.+.              
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------  136 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN--------------  136 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT--------------
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC--------------
Confidence            899999999754321    1233467899999999999999987632  48999999877654321              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc--------cHHHHHHHHhcCccccC
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT--------SSLVLIKLLKEGYESLE  219 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~  219 (319)
                             ...|+.||.+.+.+++.++.+   +|++++.++||.+.++........        .........      ..
T Consensus       137 -------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  203 (244)
T 4e4y_A          137 -------SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEE------KE  203 (244)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHH------TT
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHh------hc
Confidence                   466999999999999988763   589999999999987642110000        000111111      11


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ...+.+.+++|+|+++++++.....  .| .++++|
T Consensus       204 ~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          204 FPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence            2456789999999999999976432  34 556665

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=8.6e-25  Score=186.97  Aligned_cols=207  Identities=17%  Similarity=0.173  Sum_probs=155.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh------hHHHHHhhhccCCCeEEEEccCCChhhHHHHh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE------KNARLYELEKASENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+..+.      ......++...+.++.++.+|++|.+++.+++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            678889999999999999999999999999999999987631      11222333333567899999999999998877


Q ss_pred             c-------CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCC
Q 020924           75 V-------GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        75 ~-------~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                      +       .+|++|||||.......    .+.+...+++|+.++.++++++.+.    +.++||++||..++.+..    
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----  160 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW----  160 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC----
Confidence            5       68999999997654321    1234667889999999999999765    456999999977654320    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCc-ccCCCCCCCCCccHHHHHHHHhcCc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNL-VLGPLLQSKVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~  215 (319)
                                      .+...|+.||.+.+.+++.++.+   +|++++.++||. +.++           +........ 
T Consensus       161 ----------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----------~~~~~~~~~-  212 (285)
T 3sc4_A          161 ----------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----------AVQNLLGGD-  212 (285)
T ss_dssp             ----------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----------HHHHHHTSC-
T ss_pred             ----------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----------HHHhhcccc-
Confidence                            11466999999999999988765   589999999994 4332           122222111 


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                          .....+..++|+|+++++++....
T Consensus       213 ----~~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          213 ----EAMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             ----CCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             ----ccccCCCCHHHHHHHHHHHhCCcc
Confidence                134567899999999999998764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.94  E-value=5.5e-25  Score=182.35  Aligned_cols=208  Identities=16%  Similarity=0.152  Sum_probs=156.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+||||||++.||++++++|+++|++|++.+|+.+..     .++.....++.++.+|++|+++++++++       .+|
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS-----ADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999999999975432     2222234678999999999999988764       579


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      ++|||||......    ..+.++..+++|+.++..+.+++.+.   +-.+||++||..+..+.++               
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~---------------  142 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPD---------------  142 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTT---------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCC---------------
Confidence            9999999765431    22346788999999999999888653   3369999999887665432               


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHH
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVR  229 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  229 (319)
                            ...|+.||.+...+.+.++.++  +++++.|.||.+.++.....   .    .......      +...+..++
T Consensus       143 ------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~---~----~~~~~~~------Pl~R~g~pe  203 (247)
T 3ged_A          143 ------SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF---T----QEDCAAI------PAGKVGTPK  203 (247)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C---C----HHHHHTS------TTSSCBCHH
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH---H----HHHHhcC------CCCCCcCHH
Confidence                  4669999999998888776653  79999999999977653221   1    1222222      345678999


Q ss_pred             HHHHHHHHhhccCCCCce-EEEec
Q 020924          230 DVAEALLLAYEKAEAEGR-YICTA  252 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~~-~~~~~  252 (319)
                      |+|.++++++...-..|. ..++|
T Consensus       204 diA~~v~fL~s~~~iTG~~i~VDG  227 (247)
T 3ged_A          204 DISNMVLFLCQQDFITGETIIVDG  227 (247)
T ss_dssp             HHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HHHHHHHHHHhCCCCCCCeEEECc
Confidence            999999999975434553 45554

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.94  E-value=2.3e-25  Score=183.68  Aligned_cols=220  Identities=18%  Similarity=0.119  Sum_probs=163.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--Ccce
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNG   79 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   79 (319)
                      ++++|+++||||++.||+++++.|+++|++|++.+|+..+..   .+.+...+.++..+.+|++|+++++++++  .+|+
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~---~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDET---LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH---HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH---HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            478999999999999999999999999999999999865432   23333345688999999999998888776  5899


Q ss_pred             EEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           80 VFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AK-VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        80 vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +|||||......    ..+.|+..+++|+.++..+++++.+    .+ -.+||++||..+..+.++              
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~--------------  148 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR--------------  148 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS--------------
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC--------------
Confidence            999999765432    2334688899999999999998654    23 469999999887665432              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                             ...|+.||.+...+.+.++.+   +|+++..|.||.+.++...... .............      +...+..
T Consensus       149 -------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~-~~~~~~~~~~~~~------PlgR~g~  214 (247)
T 4hp8_A          149 -------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR-ADAARNKAILERI------PAGRWGH  214 (247)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHTTC------TTSSCBC
T ss_pred             -------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc-cCHHHHHHHHhCC------CCCCCcC
Confidence                   456999999999888877654   4899999999999877532110 0011112222222      4456789


Q ss_pred             HHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          228 VRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ++|+|.++++++.....  .| .+.++|
T Consensus       215 peeiA~~v~fLaSd~a~~iTG~~i~VDG  242 (247)
T 4hp8_A          215 SEDIAGAAVFLSSAAADYVHGAILNVDG  242 (247)
T ss_dssp             THHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECc
Confidence            99999999999975433  44 445554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=1.7e-25  Score=187.70  Aligned_cols=204  Identities=17%  Similarity=0.137  Sum_probs=149.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhc---
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+..... ...+++..   ...++.++.+|++|.+++.++++   
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLE-KVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHH-HHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999865422 12222221   12578899999999998888765   


Q ss_pred             ----CcceEEEecccCCCCCCC---CccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ----GCNGVFHIACPAPSTTVP---NPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~~~~---~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                          .+|++|||||........   +.+...+++|+.++.++++++..    .+.++||++||..++.+.+         
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  153 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFA---------  153 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------C---------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCC---------
Confidence                579999999975443221   22467889999999999999853    4667999999987765332         


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                  +...|+.||.+.+.+++.++.+   .|++++.++||.+.++..           ....  .    ...
T Consensus       154 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------~~~~--~----~~~  204 (250)
T 3nyw_A          154 ------------DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA-----------KKAG--T----PFK  204 (250)
T ss_dssp             ------------CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH-----------HHTT--C----CSC
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh-----------hhcC--C----Ccc
Confidence                        1456999999999998888765   389999999999976531           1110  0    113


Q ss_pred             ccccccHHHHHHHHHHhhccCCC
Q 020924          222 LRMIVDVRDVAEALLLAYEKAEA  244 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~~  244 (319)
                      ...+++++|+|+++++++..+..
T Consensus       205 ~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          205 DEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             cccCCCHHHHHHHHHHHHcCCCc
Confidence            35588999999999999986644

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.94  E-value=3.6e-25  Score=189.10  Aligned_cols=218  Identities=17%  Similarity=0.129  Sum_probs=160.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||+|+||++++++|+++|++|++++|+..... ....++   +.++.++.+|++|.+++.++++      
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK-ALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG  102 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            466789999999999999999999999999999999765321 222222   3578999999999999998775      


Q ss_pred             CcceEEEecc-cCCCCCC---------CCccchhhhhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCC
Q 020924           76 GCNGVFHIAC-PAPSTTV---------PNPQMELLEPAVKGTLNVVKACLEA----------KVKRVIVVSSGVAVGLNP  135 (319)
Q Consensus        76 ~~d~vi~~a~-~~~~~~~---------~~~~~~~~~~Nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~~~~~~  135 (319)
                      .+|++|||++ .......         .+.+...+++|+.++.++++++...          +.++||++||..++.+.+
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  182 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI  182 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence            5799999954 3322111         1124678899999999999988632          335899999987765442


Q ss_pred             CCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHh
Q 020924          136 RWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLK  212 (319)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~  212 (319)
                                           ....|+.||.+.+.+++.++.+   .|++++.++||.+.++.....   ..........
T Consensus       183 ---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~  238 (281)
T 3ppi_A          183 ---------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALAKFAA  238 (281)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---CHHHHHHHHH
T ss_pred             ---------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---cHHHHHHHHh
Confidence                                 1566999999999888887665   389999999999987643221   1223333333


Q ss_pred             cCccccCCcccccccHHHHHHHHHHhhccCCCCc-eEEEec
Q 020924          213 EGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG-RYICTA  252 (319)
Q Consensus       213 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  252 (319)
                      ..+     ..+.+++++|+|+++++++......| .++++|
T Consensus       239 ~~~-----~~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG  274 (281)
T 3ppi_A          239 NIP-----FPKRLGTPDEFADAAAFLLTNGYINGEVMRLDG  274 (281)
T ss_dssp             TCC-----SSSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             cCC-----CCCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence            221     12568899999999999998765556 456665

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=2.8e-25  Score=185.22  Aligned_cols=213  Identities=16%  Similarity=0.154  Sum_probs=153.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.    ..+++     ++.++.+|++| +++.++++       ++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE----AAQSL-----GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHhh-----CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999999998653    11222     26888999999 77766543       68


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      |++|||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+..              
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  137 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--------------  137 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--------------
Confidence            99999999754321    1223567889999999999998853    4678999999987665321              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                           ..+...|+.||.+.+.+.+.++.+   +|++++++|||.+.++...... ............      .....+.
T Consensus       138 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~------~p~~~~~  205 (239)
T 2ekp_A          138 -----PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR-QNPELYEPITAR------IPMGRWA  205 (239)
T ss_dssp             -----TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHTT------CTTSSCB
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc-cCHHHHHHHHhc------CCCCCCc
Confidence                 012567999999999999888765   3899999999999887532100 001111222111      1345688


Q ss_pred             cHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          227 DVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +++|+|+++++++....  ..| .+.++|.
T Consensus       206 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          206 RPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            99999999999997532  244 4566553

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=3.9e-25  Score=186.03  Aligned_cols=216  Identities=16%  Similarity=0.117  Sum_probs=155.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +|+++||||+|+||++++++|+++|  +.|++++|+..... ...+++   +.++.++.+|++|.++++++++       
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLK-KLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHH-HHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHH-HHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999874  78988888754321 111222   3578999999999999988775       


Q ss_pred             CcceEEEecccCCC-CC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPS-TT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~-~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|++|||||.... ..    ..+.+...+++|+.++.++++++.    +.+ ++||++||..++.+.+           
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~-----------  145 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFS-----------  145 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSC-----------
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCC-----------
Confidence            57999999997533 11    122346789999999999999984    335 6999999987665432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC-CceEEEEecCcccCCCCCCCCC------ccHHHHHHHHhcCccccC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-GLDVVTICPNLVLGPLLQSKVN------TSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~  219 (319)
                                +...|+.||.+.+.+.+.++.++ +++++.++||.+.++.......      .............     
T Consensus       146 ----------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  210 (254)
T 3kzv_A          146 ----------SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK-----  210 (254)
T ss_dssp             ----------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH-----
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH-----
Confidence                      15679999999999999988765 8999999999999886543211      1122222222221     


Q ss_pred             CcccccccHHHHHHHHHHhhccCC---CCce-EEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE---AEGR-YICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~-~~~~~  252 (319)
                       ..+.+.+++|+|+++++++....   ..|. +.+++
T Consensus       211 -~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg  246 (254)
T 3kzv_A          211 -ENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYND  246 (254)
T ss_dssp             -TTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTC
T ss_pred             -hcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecC
Confidence             44568899999999999998663   3454 45554

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.93  E-value=5.8e-25  Score=187.65  Aligned_cols=221  Identities=17%  Similarity=0.099  Sum_probs=159.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||+|+||++++++|+++|++|++++|+....  ..+...  .+.++.++.+|++|.+++.++++     
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERL--RELEVA--HGGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHH--TBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH--HHHHHH--cCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            889999999999999999999999999999999999975532  222111  24578999999999998887765     


Q ss_pred             --CcceEEEecccCCCCCC-----CC----ccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCc
Q 020924           76 --GCNGVFHIACPAPSTTV-----PN----PQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~-----~~----~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                        .+|++|||||.......     .+    .++..+++|+.++.++++++.+.   +.++||++||..++.+.+.     
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  151 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGG-----  151 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSS-----
T ss_pred             cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCC-----
Confidence              57999999997543211     11    14567889999999999998654   2259999999877654431     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCccH-H------HHHHHHh
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTSS-L------VLIKLLK  212 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~~-~------~~~~~~~  212 (319)
                                      ...|+.||.+.+.+.+.++.++  +++++.++||.+.++.......... .      .......
T Consensus       152 ----------------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (281)
T 3zv4_A          152 ----------------GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKS  215 (281)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHH
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHh
Confidence                            4569999999999999887663  3999999999998875432211000 0      1111111


Q ss_pred             cCccccCCcccccccHHHHHHHHHHhhccCC---CCc-eEEEec
Q 020924          213 EGYESLENKLRMIVDVRDVAEALLLAYEKAE---AEG-RYICTA  252 (319)
Q Consensus       213 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~~~~  252 (319)
                      .      ...+.+..++|+|+++++++..+.   ..| .+.++|
T Consensus       216 ~------~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdG  253 (281)
T 3zv4_A          216 V------LPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDG  253 (281)
T ss_dssp             T------CTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESS
T ss_pred             c------CCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECC
Confidence            1      145668899999999999998433   244 456665

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.93  E-value=1.1e-24  Score=182.97  Aligned_cols=220  Identities=18%  Similarity=0.133  Sum_probs=160.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.+.. ....+++   +.++..+.+|++|.++++++++       
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l-~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVL-DAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999986532 2223333   4578889999999999988765       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      .+|++|||||......    ..+.|+..+++|+.++..+++++.+.-  -++||++||..+..+.+.             
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~-------------  169 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA-------------  169 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT-------------
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC-------------
Confidence            4799999999754432    223468889999999999999998762  248999999887665432             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCcc----HHHHHHHHhcCccccCCcc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTS----SLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  222 (319)
                              ...|+.||.+...+.+.++.+   +|+++..|.||.+.++.........    ..+........      +.
T Consensus       170 --------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~------Pl  235 (273)
T 4fgs_A          170 --------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQV------PM  235 (273)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHS------TT
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcC------CC
Confidence                    466999999999988888765   4899999999999887543221111    11222222222      34


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      ..+..++|+|.++++++.....  .| ...++|.
T Consensus       236 gR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          236 GRVGRAEEVAAAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence            5678999999999999975433  44 4455553

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.93  E-value=2.6e-25  Score=184.37  Aligned_cols=198  Identities=17%  Similarity=0.142  Sum_probs=145.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc----ceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGC----NGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----d~v   80 (319)
                      ||+||||||+|+||++++++|+++|++|++++|+.+.. .....++   ..++.++.+|++|.+++.++++.+    |+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            46899999999999999999999999999999976532 1122222   457889999999999999998754    999


Q ss_pred             EEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCcccCCCCCCCccc
Q 020924           81 FHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKV---KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        81 i~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~---~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  153 (319)
                      |||||......    ..+.+...+++|+.++.++++++.+...   .+||++||..++.+.+                  
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------------  138 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA------------------  138 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT------------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC------------------
Confidence            99999654321    1223466889999999999999876522   2999999987765432                  


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhhC---CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKKT---GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRD  230 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  230 (319)
                         +...|+.||.+.+.+++.++.++   |++++.++||.+.++......           ..      .....+++++|
T Consensus       139 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~------~~~~~~~~~~d  198 (230)
T 3guy_A          139 ---QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-----------KS------LDTSSFMSAED  198 (230)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------CCCHHH
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-----------CC------CCcccCCCHHH
Confidence               14669999999999999887764   899999999999877532210           00      13456789999


Q ss_pred             HHHHHHHhhccCCC
Q 020924          231 VAEALLLAYEKAEA  244 (319)
Q Consensus       231 ~a~~~~~~~~~~~~  244 (319)
                      +|++++.++.++..
T Consensus       199 vA~~i~~l~~~~~~  212 (230)
T 3guy_A          199 AALMIHGALANIGN  212 (230)
T ss_dssp             HHHHHHHHCCEETT
T ss_pred             HHHHHHHHHhCcCC
Confidence            99999999986543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.93  E-value=2.2e-25  Score=189.04  Aligned_cols=224  Identities=15%  Similarity=0.088  Sum_probs=165.4

Q ss_pred             CCCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |++++|+++||||+  |+||++++++|+++|++|++++|+........+.++.. .+.++.++.+|++|.++++++++  
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            45788999999999  99999999999999999999998876542333333322 24678999999999999888775  


Q ss_pred             -----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcc
Q 020924           76 -----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                           .+|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+...      
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  169 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP------  169 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC------
Confidence                 4699999999765432    122346789999999999999984    446679999999876654310      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCC--ceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG--LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   .+...|+.||.+.+.+++.++.+++  ++++.+.||.+.++.....   ...........      .
T Consensus       170 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~------~  227 (267)
T 3gdg_A          170 -------------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---PKETQQLWHSM------I  227 (267)
T ss_dssp             -------------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---CHHHHHHHHTT------S
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---CHHHHHHHHhc------C
Confidence                         1256799999999999999887653  8999999999988754322   12222222221      1


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +.+.+.+++|+|+++++++....  ..| .++++|
T Consensus       228 ~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          228 PMGRDGLAKELKGAYVYFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             TTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             CCCCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence            45678899999999999997543  234 456665

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.93  E-value=1.3e-24  Score=186.40  Aligned_cols=218  Identities=15%  Similarity=0.104  Sum_probs=158.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEE-cCCChhhHHHHHhhh-ccCCCeEEEEccCCChh-----------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTA-REPSDEKNARLYELE-KASENLKLFKADLLDYD-----------   68 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~-----------   68 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++ |+.+.. .....++. ..+.++.++.+|++|.+           
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEA-NALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHH-HHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence            47789999999999999999999999999999999 875432 22222332 22457899999999998           


Q ss_pred             ------hHHHHhc-------CcceEEEecccCCCCCC------------------CCccchhhhhHHHHHHHHHHHHHh-
Q 020924           69 ------SVKSAIV-------GCNGVFHIACPAPSTTV------------------PNPQMELLEPAVKGTLNVVKACLE-  116 (319)
Q Consensus        69 ------~~~~~~~-------~~d~vi~~a~~~~~~~~------------------~~~~~~~~~~Nv~~~~~l~~~~~~-  116 (319)
                            ++.++++       .+|++|||||.......                  .+.+...+++|+.++.++++++.+ 
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  8887765       68999999997543211                  122456789999999999999874 


Q ss_pred             ---CC------CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEE
Q 020924          117 ---AK------VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVV  184 (319)
Q Consensus       117 ---~~------~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~  184 (319)
                         .+      .++||++||..++.+.+                     ....|+.||.+.+.+.+.++.+   +|++++
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  223 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPLL---------------------GYTIYTMAKGALEGLTRSAALELAPLQIRVN  223 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCCC---------------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence               34      57999999987655432                     1466999999999998887665   489999


Q ss_pred             EEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc-ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          185 TICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR-MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       185 ~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .++||.+.++. . .   ............      ... .+.+++|+|+++++++....  ..| .+.++|
T Consensus       224 ~v~PG~v~T~~-~-~---~~~~~~~~~~~~------p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  284 (291)
T 1e7w_A          224 GVGPGLSVLVD-D-M---PPAVWEGHRSKV------PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  284 (291)
T ss_dssp             EEEESSBCCGG-G-S---CHHHHHHHHTTC------TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             EEeeCCccCCc-c-C---CHHHHHHHHhhC------CCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence            99999998876 2 1   122222222211      223 57899999999999997532  244 455655

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.93  E-value=7e-25  Score=186.53  Aligned_cols=214  Identities=14%  Similarity=0.155  Sum_probs=155.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh------hHHHHHhhhccCCCeEEEEccCCChhhHHHHh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE------KNARLYELEKASENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|+....      .......+...+.++.++.+|++|.+++.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            788999999999999999999999999999999999986531      11122222223467899999999999988876


Q ss_pred             c-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCC
Q 020924           75 V-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        75 ~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~  139 (319)
                      +       .+|++|||||......    ..+.+...+++|+.++.++++++..    .+.++||++||..++.+..    
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----  157 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW----  157 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH----
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----
Confidence            5       5899999999764321    1223467889999999999999865    3556999999977654310    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCc-ccCCCCCCCCCccHHHHHHHHhcCc
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNL-VLGPLLQSKVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~  215 (319)
                                     ......|+.||.+.+.+++.++.+   +|++++.++||. +-++...            ...+  
T Consensus       158 ---------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~------------~~~~--  208 (274)
T 3e03_A          158 ---------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN------------MLPG--  208 (274)
T ss_dssp             ---------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------C--
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh------------hccc--
Confidence                           011466999999999999888765   489999999994 5444211            1111  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCCC--CceEEEe
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAEA--EGRYICT  251 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~  251 (319)
                          .....+..++|+|+++++++.....  .|.++..
T Consensus       209 ----~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~  242 (274)
T 3e03_A          209 ----VDAAACRRPEIMADAAHAVLTREAAGFHGQFLID  242 (274)
T ss_dssp             ----CCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEH
T ss_pred             ----ccccccCCHHHHHHHHHHHhCccccccCCeEEEc
Confidence                1223477999999999999976433  4544443

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=4e-25  Score=184.00  Aligned_cols=189  Identities=17%  Similarity=0.166  Sum_probs=144.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      |++|+||||||+|+||++++++|+++|++|++++|+.....           ....++.+|++|.+++.++++       
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999876421           235677899999988887764       


Q ss_pred             --CcceEEEecccCCCCCC-----CCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTTV-----PNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~-----~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        ++|+||||||.......     .+.+...+++|+.++.++++++.+..  .++||++||..++.+.+           
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  138 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-----------  138 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC-----------
Confidence              68999999996543211     12246788999999999999998752  25999999987765432           


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhC-----CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-----GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                +...|+.||.+.+.+++.++.++     |+++++++||.+.++..           ......      ..
T Consensus       139 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~------~~  191 (236)
T 1ooe_A          139 ----------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-----------RKWMPN------AD  191 (236)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-----------HHHSTT------CC
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch-----------hhcCCC------cc
Confidence                      15669999999999999887654     59999999999987631           111100      12


Q ss_pred             ccccccHHHHHHHHHHhhc
Q 020924          222 LRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~  240 (319)
                      ...+++++|+|++++.++.
T Consensus       192 ~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          192 HSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             GGGCBCHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHHHc
Confidence            3346789999999996663

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.93  E-value=6e-26  Score=190.05  Aligned_cols=210  Identities=25%  Similarity=0.276  Sum_probs=135.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHH---HHh---
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVK---SAI---   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~---   74 (319)
                      |++++|++|||||+|+||++++++|++ |+.|++++|+...  ...+.+    ..++.++.+|+++.....   +.+   
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~--~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEH--LAALAE----IEGVEPIESDIVKEVLEEGGVDKLKNL   73 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHH--HHHHHT----STTEEEEECCHHHHHHTSSSCGGGTTC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHH--HHHHHh----hcCCcceecccchHHHHHHHHHHHHhc
Confidence            889999999999999999999999987 9999999987543  222222    246889999998764421   122   


Q ss_pred             cCcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           75 VGCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        75 ~~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      ..+|+||||||.......    .+.+...+++|+.++.++++++...   ..++||++||..++.+.+            
T Consensus        74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  141 (245)
T 3e9n_A           74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP------------  141 (245)
T ss_dssp             SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC------------
Confidence            258999999997654321    1224677899999999888887542   126999999987766442            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                               ....|+.||.+.+.+++.++.+   +|++++.++||.+.++......       .....      .-....
T Consensus       142 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~------~~~~~~  199 (245)
T 3e9n_A          142 ---------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM-------DSQGT------NFRPEI  199 (245)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCGG
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh-------hhhhc------cccccc
Confidence                     1566999999999999988765   5899999999999987533210       00000      013346


Q ss_pred             cccHHHHHHHHHHhhccCCCCceEEEe
Q 020924          225 IVDVRDVAEALLLAYEKAEAEGRYICT  251 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~~~~~~~~~  251 (319)
                      +++++|+|++++++++.+....++++.
T Consensus       200 ~~~p~dvA~~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          200 YIEPKEIANAIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             GSCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHcCCCccceeeeE
Confidence            889999999999999987766666654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.93  E-value=3.5e-24  Score=180.19  Aligned_cols=223  Identities=14%  Similarity=0.083  Sum_probs=162.3

Q ss_pred             CCCCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |++++|+++||||+|  .||.+++++|+++|++|++.+|+.+... ...+.+... ..++.++.+|++|.+++.++++  
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRK-ELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            789999999999876  8999999999999999999999865432 122222222 3478899999999999887764  


Q ss_pred             -----CcceEEEecccCCCCC--------CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCC
Q 020924           76 -----GCNGVFHIACPAPSTT--------VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~--------~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                           .+|++|||||......        ..+.+...+++|+.++..+..++...  .-.+||++||..+..+.++    
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~----  156 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQN----  156 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTT----
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCccc----
Confidence                 5799999999653211        11123455788999999999888765  2359999999887665432    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                                       ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++..... ..............   
T Consensus       157 -----------------~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~---  215 (256)
T 4fs3_A          157 -----------------YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV-GGFNTILKEIKERA---  215 (256)
T ss_dssp             -----------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHHHHHS---
T ss_pred             -----------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc-cCCHHHHHHHHhcC---
Confidence                             466999999999888877654   489999999999988764432 12233344444433   


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                         +...+..++|+|.++++++.....  .| .+.++|
T Consensus       216 ---Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDG  250 (256)
T 4fs3_A          216 ---PLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDS  250 (256)
T ss_dssp             ---TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence               344577899999999999975432  44 445554

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.93  E-value=8e-25  Score=183.80  Aligned_cols=187  Identities=13%  Similarity=0.105  Sum_probs=147.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------C
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------G   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   76 (319)
                      ++|+||||||+|+||++++++|+++|++|++++|+..+.             ....+.+|++|.+++.++++       .
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~   87 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------ADHSFTIKDSGEEEIKSVIEKINSKSIK   87 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------SSEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------cccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence            458999999999999999999999999999999987642             12457789999999988775       3


Q ss_pred             cceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           77 CNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      +|+||||||......     ..+.+...+++|+.++.++++++.+..  .++||++||..++.+.+              
T Consensus        88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  153 (251)
T 3orf_A           88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS--------------  153 (251)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT--------------
T ss_pred             CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC--------------
Confidence            699999999654321     122346788999999999999998753  24899999987765442              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                             ....|+.||.+.+.+++.++.+     ++++++.++||.+.++..           .....      ......
T Consensus       154 -------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------~~~~~------~~~~~~  209 (251)
T 3orf_A          154 -------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------RKYMS------DANFDD  209 (251)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------HHHCT------TSCGGG
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------hhhcc------cccccc
Confidence                   1566999999999999998776     579999999999977531           11111      124567


Q ss_pred             cccHHHHHHHHHHhhcc
Q 020924          225 IVDVRDVAEALLLAYEK  241 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~  241 (319)
                      +++++|+|++++.++..
T Consensus       210 ~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          210 WTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             SBCHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHhcC
Confidence            88999999999999987

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-24  Score=182.29  Aligned_cols=209  Identities=11%  Similarity=0.057  Sum_probs=149.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh---cCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI---VGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~   79 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+..     .++++    ..+.++ +|+  .++++.++   .++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~----~~~~~~-~D~--~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-----LLKRS----GHRYVV-CDL--RKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHT----CSEEEE-CCT--TTCHHHHHHHSCCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-----HHHhh----CCeEEE-eeH--HHHHHHHHHHhcCCCE
Confidence            56899999999999999999999999999999999752     12222    256677 999  33444444   47899


Q ss_pred             EEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           80 VFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKAC----LEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        80 vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      ||||||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+                
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------  148 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE----------------  148 (249)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC----------------
Confidence            999999654321    12234678899999988776655    445778999999987665432                


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHH-HHHhcCccccCCccccccc
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLI-KLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  227 (319)
                           +...|+.+|.+.+.+++.++.+   +|+++++++||.++++.....   ...... .....      .....+++
T Consensus       149 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~p~~~~~~  214 (249)
T 1o5i_A          149 -----NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL---LSEEKKKQVESQ------IPMRRMAK  214 (249)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH---SCHHHHHHHHTT------STTSSCBC
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccccc---chhhHHHHHHhc------CCCCCCcC
Confidence                 1466999999999988887664   589999999999998853210   011111 11111      13456899


Q ss_pred             HHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          228 VRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       228 v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ++|+|+++++++....  ..| .++++|.
T Consensus       215 ~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          215 PEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            9999999999997543  234 5677654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.93  E-value=2.4e-25  Score=187.71  Aligned_cols=226  Identities=13%  Similarity=0.111  Sum_probs=147.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC----cceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG----CNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~v   80 (319)
                      ||+||||||+|+||++++++|+++|++|++++|+..+..           .  . +.+|++|.++++++++.    +|+|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~--~-~~~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------A--D-LSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C--C-TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----------c--c-cccCCCCHHHHHHHHHHhCCCCCEE
Confidence            468999999999999999999999999999999875321           0  1 56899999999998864    5999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCC-CCcccCCCCCCCcc---
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWP-KGQIMDETCWSDKE---  152 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~-~~~~~~E~~~~~~~---  152 (319)
                      |||||....   ..+++..+++|+.++.++++++.+    .+.++||++||..++......+ ......+.++....   
T Consensus        67 v~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (257)
T 1fjh_A           67 VLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             EECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             EECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhh
Confidence            999997542   134688999999999999999873    4567999999987763211000 00000000000000   


Q ss_pred             ---ccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          153 ---YCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       153 ---~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                         .+..+...|+.||.+.+.+++.++.+   +|+++++++||.+.++......  ...........    .......++
T Consensus       144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~----~~~~~~~~~  217 (257)
T 1fjh_A          144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL--QDPRYGESIAK----FVPPMGRRA  217 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------CCCSTTSCC
T ss_pred             hcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhc--cchhHHHHHHh----cccccCCCC
Confidence               01112567999999999999988765   5899999999999987643210  00010111110    011334588


Q ss_pred             cHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          227 DVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +++|+|+++++++..+.  ..| .+.++|.
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            99999999999997652  245 4566653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.93  E-value=9.6e-25  Score=185.23  Aligned_cols=208  Identities=16%  Similarity=0.142  Sum_probs=145.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG------   76 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   76 (319)
                      |+ |++|||||+|+||++++++|+++|++|++++|+.... .....++... .++.++.+|++|.+++.++++.      
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERL-QALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            45 7999999999999999999999999999999975432 1222222211 4688999999999999988864      


Q ss_pred             -cceEEEecccCCC-C----CCCCccchhhhhHHHHHHHHHHHHH----hCCCC-EEEEeccccccccCCCCCCCcccCC
Q 020924           77 -CNGVFHIACPAPS-T----TVPNPQMELLEPAVKGTLNVVKACL----EAKVK-RVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        77 -~d~vi~~a~~~~~-~----~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~-~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       +|+||||||.... .    ...+.+...+++|+.++.++++++.    +.+.+ +||++||..++.+.+          
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~----------  166 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYP----------  166 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCT----------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCC----------
Confidence             5999999997542 1    1123346789999999888887775    34667 999999987665432          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 ....|+.+|.+.+.+++.++.+   +|++++.++||.+.++.................         ..
T Consensus       167 -----------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------~~  226 (272)
T 2nwq_A          167 -----------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTY---------AG  226 (272)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------C
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhh---------cc
Confidence                       1466999999999999988765   489999999999988753211000000000000         01


Q ss_pred             cccccHHHHHHHHHHhhccCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ..++.++|+|+++++++..+.
T Consensus       227 ~~~~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          227 AHPIQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             CCCBCHHHHHHHHHHHHTSCT
T ss_pred             CCCCCHHHHHHHHHHHhCCCc
Confidence            124799999999999998643

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.93  E-value=8.6e-25  Score=183.21  Aligned_cols=204  Identities=18%  Similarity=0.152  Sum_probs=145.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      |+++||||+|+||++++++|+++|++|++++|+.+.. .....++   ..++.++.+|++|.+++.++++       .+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            5799999999999999999999999999999975432 1122222   2468899999999999998875       579


Q ss_pred             eEEEecccCCC-C----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           79 GVFHIACPAPS-T----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        79 ~vi~~a~~~~~-~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      ++|||||.... .    ...+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+              
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------  142 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA--------------  142 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT--------------
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCC--------------
Confidence            99999997521 1    11223467899999999999998863    4667999999987654332              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCccc-CCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVL-GPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                             +...|+.||.+.+.+++.++.+   +|++++.++||.+. ++.................         ....+
T Consensus       143 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~---------~~~~~  206 (248)
T 3asu_A          143 -------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---------QNTVA  206 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------CC
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHH---------hccCC
Confidence                   1466999999999999988765   48999999999999 5542211000000000000         11234


Q ss_pred             ccHHHHHHHHHHhhccCC
Q 020924          226 VDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~  243 (319)
                      ++++|+|+++++++....
T Consensus       207 ~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          207 LTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             BCHHHHHHHHHHHHHSCT
T ss_pred             CCHHHHHHHHHHHhcCCc
Confidence            699999999999998643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.93  E-value=5.1e-24  Score=186.46  Aligned_cols=214  Identities=15%  Similarity=0.146  Sum_probs=157.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh------hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE------KNARLYELEKASENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+.      .....+++...+.++.++.+|++|.+++.++++ 
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            5689999999999999999999999999999999987641      112233333345678999999999999988775 


Q ss_pred             ------CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCc
Q 020924           76 ------GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 ------~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                            .+|+||||||.......    .+.++..+++|+.++.++++++..    .+..+||++||...+.+..      
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~------  196 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW------  196 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC------
Confidence                  68999999997643321    223467899999999999999964    3557999999987654321      


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCc-ccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNL-VLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                   ......|+.||.+.+.+++.++.++  +++++.+.|+. +.++           +... ..+.    
T Consensus       197 -------------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-----------~~~~-~~~~----  247 (346)
T 3kvo_A          197 -------------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-----------AMDM-LGGP----  247 (346)
T ss_dssp             -------------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-----------HHHH-HCC-----
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-----------HHHh-hccc----
Confidence                         0125679999999999999887764  79999999996 4332           1111 1111    


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC-CCceEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE-AEGRYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~  252 (319)
                       .....+..++|+|+++++++.... ..|.+++.+
T Consensus       248 -~~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          248 -GIESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             --CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             -cccccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence             134457799999999999998722 255555554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.93  E-value=2.6e-24  Score=180.47  Aligned_cols=220  Identities=17%  Similarity=0.136  Sum_probs=155.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||++.||++++++|+++|++|++.+|+..+.           .....++.+|++|.++++.+++     
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999976532           1233568899999999887764     


Q ss_pred             --CcceEEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++|||||.....      ...+.|+..+++|+.++.++++++.+    .+-.+||++||..+..+.+.       
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~-------  148 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPE-------  148 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCC-------
Confidence              479999999964321      12234577899999999999888764    35679999999876654321       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC-------CccHHHHHHHHhc
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV-------NTSSLVLIKLLKE  213 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~-------~~~~~~~~~~~~~  213 (319)
                                   ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++......       ........+....
T Consensus       149 -------------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (261)
T 4h15_A          149 -------------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMD  215 (261)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred             -------------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHH
Confidence                         1456999999999888877665   4899999999999876321000       0000000000000


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      .  ...-+...+..++|+|+++++++.....  .| .+.++|.
T Consensus       216 ~--~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          216 G--LGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             H--TTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             H--hcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            0  0111456688999999999999965432  44 4566654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.93  E-value=2.9e-24  Score=181.44  Aligned_cols=215  Identities=14%  Similarity=0.101  Sum_probs=147.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +|++|++|||||+|+||++++++|+++|++|++++|+.+.. .....++...+.++.++.+|++|.+++.++++      
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTL-RVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999975432 12223332224578899999999998887653      


Q ss_pred             --CcceEEEecc--cC------CC---CCCCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCC
Q 020924           76 --GCNGVFHIAC--PA------PS---TTVPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWP  138 (319)
Q Consensus        76 --~~d~vi~~a~--~~------~~---~~~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~  138 (319)
                        .+|++|||||  ..      ..   ....+.+...+++|+.++.++.+++.    +.+.++||++||..++.+.    
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  156 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM----  156 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC----
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC----
Confidence              4699999994  21      11   11223356788999999988877775    3456799999997654321    


Q ss_pred             CCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc
Q 020924          139 KGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  215 (319)
                                        +...|+.||.+.+.+++.++.+   +|+++++++||.+.++...................  
T Consensus       157 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--  216 (260)
T 2qq5_A          157 ------------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ--  216 (260)
T ss_dssp             ------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------
T ss_pred             ------------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH--
Confidence                              1456999999999999888754   48999999999998875332100000000000000  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                        .......+..++|+|+++++++....
T Consensus       217 --~~~~~~~~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          217 --FKSAFSSAETTELSGKCVVALATDPN  242 (260)
T ss_dssp             -------CHHHHHHHHHHHHHHHHTCTT
T ss_pred             --HHhhhccCCCHHHHHHHHHHHhcCcc
Confidence              00112235689999999999998653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=1.7e-24  Score=180.78  Aligned_cols=200  Identities=13%  Similarity=0.100  Sum_probs=150.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--------   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   75 (319)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.....           ....++.+|++|.+++.++++        
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999876421           235677899999998887765        


Q ss_pred             -CcceEEEecccCCCCCC-----CCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 -GCNGVFHIACPAPSTTV-----PNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~-----~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       ++|+||||||.......     .+.+...+++|+.++.++++++.+..  .++||++||..++.+.+            
T Consensus        75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  142 (241)
T 1dhr_A           75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------------  142 (241)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------
T ss_pred             CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC------------
Confidence             68999999997543211     12246678999999999999998752  25999999987765432            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                               +...|+.||.+.+.+++.++.+     +|++++.++||.+.++..           ......      ...
T Consensus       143 ---------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-----------~~~~~~------~~~  196 (241)
T 1dhr_A          143 ---------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPE------ADF  196 (241)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTT------SCG
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-----------cccCcc------hhh
Confidence                     1466999999999999988765     369999999999876521           111000      123


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ..+++++|+|+++++++.....  .| .+.+.|
T Consensus       197 ~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          197 SSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred             ccCCCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence            3468899999999999975432  34 444443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.92  E-value=4.5e-24  Score=182.77  Aligned_cols=202  Identities=14%  Similarity=0.042  Sum_probs=148.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC-CCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS-ENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++|+|+||||+|+||++++++|+++|++|++++|+..... ....++...+ .++.++.+|++|.+++.++++      
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ-KVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            66789999999999999999999999999999999765321 1112221112 368899999999998887765      


Q ss_pred             -CcceEEEe-cccCCCCCC---CCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 -GCNGVFHI-ACPAPSTTV---PNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 -~~d~vi~~-a~~~~~~~~---~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       ++|+|||| |+.......   .+.+...+++|+.++.++++++.+.   +.++||++||.+++.+.+            
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  172 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP------------  172 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT------------
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC------------
Confidence             68999999 554432211   1223567899999999999988653   346999999987654332            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhC-----CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-----GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                               +...|+.||.+.+.+++.++.++     ++++++++||.+.++..           .....+      ...
T Consensus       173 ---------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-----------~~~~~~------~~~  226 (286)
T 1xu9_A          173 ---------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-----------MKAVSG------IVH  226 (286)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-----------HHHSCG------GGG
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-----------HHhccc------ccc
Confidence                     15679999999999988876543     89999999999976531           111111      112


Q ss_pred             cccccHHHHHHHHHHhhccCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ..+++++|+|+.++.++..+.
T Consensus       227 ~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          227 MQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             GGCBCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHHHhcCC
Confidence            346899999999999998653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.92  E-value=2.7e-24  Score=180.21  Aligned_cols=201  Identities=15%  Similarity=0.111  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccC--CChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADL--LDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl--~~~~~~~~~~~----   75 (319)
                      +++|+++||||+|+||++++++|+++|++|++++|+.... .....++... ..+..++.+|+  +|.+++.++++    
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASL-AEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHH-HHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999986542 2222223222 24677788877  88888877664    


Q ss_pred             ---CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         .+|+||||||......     ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+        
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  162 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA--------  162 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT--------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC--------
Confidence               6899999999753321     123346788999999999999985    34557999999987665432        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                   +...|+.||.+.+.+++.++.+    .+++++.++||.+.++.           .......      
T Consensus       163 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-----------~~~~~~~------  212 (247)
T 3i1j_A          163 -------------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM-----------RAQAYPD------  212 (247)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH-----------HHHHSTT------
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc-----------chhcccc------
Confidence                         1466999999999999888765    47999999999987652           1111111      


Q ss_pred             CcccccccHHHHHHHHHHhhccC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .....+..++|+|+++++++...
T Consensus       213 ~~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          213 ENPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             SCGGGSCCGGGGTHHHHHHHSGG
T ss_pred             cCccCCCCHHHHHHHHHHHhCch
Confidence            12234678999999999999754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.92  E-value=3e-24  Score=180.64  Aligned_cols=218  Identities=14%  Similarity=0.048  Sum_probs=147.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH----HhcCcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS----AIVGCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~----~~~~~d~v   80 (319)
                      ||++|||||+|+||++++++|+++|++|++++|+.+...  .+.++...+.++..+  |..+.+.+.+    .+..+|+|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD--ELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH--HHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence            468999999999999999999999999999999765422  121122222344443  4444333222    22368999


Q ss_pred             EEecccC-CCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           81 FHIACPA-PSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        81 i~~a~~~-~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                      |||||.. ....    ..+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+                
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------  140 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------------  140 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------------
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC----------------
Confidence            9999975 3221    1223467899999999999998853    3567999999987665432                


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc-----cHHHHHHHHhcCccccCCccc
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT-----SSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  223 (319)
                           ....|+.||.+.+.+++.++.+   +|+++++++||.++|+........     ............      ...
T Consensus       141 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~------p~~  209 (254)
T 1zmt_A          141 -----ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT------ALQ  209 (254)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS------SSS
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC------CCC
Confidence                 1466999999999999888765   489999999999988764332110     011111111111      234


Q ss_pred             ccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          224 MIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                      .+.+++|+|+++++++.....  .| .+.++|.
T Consensus       210 ~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          210 RLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            578999999999999976432  44 4566654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.91  E-value=1.2e-23  Score=183.17  Aligned_cols=227  Identities=19%  Similarity=0.144  Sum_probs=153.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh--HHHHHhhh---ccCCCeEEEEccCCChhhHHHHhcC--
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK--NARLYELE---KASENLKLFKADLLDYDSVKSAIVG--   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~--   76 (319)
                      ++|+|+||||+|+||++++++|+++|++|+++.|+.....  ...+....   ..+.++.++.+|++|.+++.++++.  
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            3689999999999999999999999999998888654321  11122111   1135789999999999999998875  


Q ss_pred             ---cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           77 ---CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        77 ---~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                         +|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.         
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~---------  151 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF---------  151 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT---------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC---------
Confidence               899999999654321    122346789999999999999974    346789999999877654321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHH-------HHHHHhcCc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLV-------LIKLLKEGY  215 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~-------~~~~~~~~~  215 (319)
                                  ...|+.||.+.+.+++.++.+   +|+++++|+||.|.++............       .........
T Consensus       152 ------------~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
T 1jtv_A          152 ------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL  219 (327)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHH
T ss_pred             ------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHH
Confidence                        456999999999999988764   5899999999999887643211110000       000000000


Q ss_pred             cccCCcccc-cccHHHHHHHHHHhhccCCCCceEEEe
Q 020924          216 ESLENKLRM-IVDVRDVAEALLLAYEKAEAEGRYICT  251 (319)
Q Consensus       216 ~~~~~~~~~-~i~v~D~a~~~~~~~~~~~~~~~~~~~  251 (319)
                      ......... .++++|+|+++++++..+.....|+.+
T Consensus       220 ~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg  256 (327)
T 1jtv_A          220 AHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (327)
T ss_dssp             HHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            000000111 258999999999999876544455443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.91  E-value=7e-24  Score=178.97  Aligned_cols=212  Identities=19%  Similarity=0.106  Sum_probs=151.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHH---CCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc-
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLS---RDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      +|++|+++||||+|+||++++++|++   +|++|++++|+.+.. .....++...  +.++.++.+|++|.+++.++++ 
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESML-RQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHH-HHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHH-HHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            46789999999999999999999999   899999999976432 1222222221  3468899999999998887664 


Q ss_pred             --------Ccc--eEEEecccCCC--C-----CCCCccchhhhhHHHHHHHHHHHHHhCC------CCEEEEeccccccc
Q 020924           76 --------GCN--GVFHIACPAPS--T-----TVPNPQMELLEPAVKGTLNVVKACLEAK------VKRVIVVSSGVAVG  132 (319)
Q Consensus        76 --------~~d--~vi~~a~~~~~--~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~~------~~~iv~~SS~~~~~  132 (319)
                              .+|  +||||||....  .     ...+.+...+++|+.++.++++++.+..      .++||++||..++.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence                    357  99999997532  1     1123356789999999999999998652      35799999987765


Q ss_pred             cCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC-CceEEEEecCcccCCCCCCCCC--ccHHHHHH
Q 020924          133 LNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-GLDVVTICPNLVLGPLLQSKVN--TSSLVLIK  209 (319)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~~~~~--~~~~~~~~  209 (319)
                      +.+                     +...|+.||.+.+.+++.++.++ +++++.++||.+.++.......  ........
T Consensus       162 ~~~---------------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  220 (259)
T 1oaa_A          162 PYK---------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             CCT---------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             CCC---------------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHH
Confidence            432                     15669999999999999988775 4999999999987653110000  00000011


Q ss_pred             HHhcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          210 LLKEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       210 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      ....      .+...+.+++|+|+++++++..
T Consensus       221 ~~~~------~p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          221 LQKL------KSDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHH------HHTTCSBCHHHHHHHHHHHHHH
T ss_pred             HHHh------hhcCCcCCHHHHHHHHHHHHhh
Confidence            1110      0234578999999999999974

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.91  E-value=1.7e-23  Score=177.58  Aligned_cols=219  Identities=13%  Similarity=0.082  Sum_probs=154.0

Q ss_pred             CCCCeEEEeCc--chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGA--GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|+++||||  +|+||++++++|+++|++|++++|+..+......+++   +.++.++.+|++|.++++++++     
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTEA   81 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            67899999999  9999999999999999999999998653211122221   3467889999999999888775     


Q ss_pred             -----CcceEEEecccCCC-----C----CCCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCC
Q 020924           76 -----GCNGVFHIACPAPS-----T----TVPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPK  139 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~-----~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~  139 (319)
                           .+|++|||||....     .    ...+.+...+++|+.++.++++++.+..  .++||++||... .+.+    
T Consensus        82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~----  156 (269)
T 2h7i_A           82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMP----  156 (269)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCT----
T ss_pred             hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccC----
Confidence                 78999999997541     1    1122346678999999999999998652  259999999654 2211    


Q ss_pred             CcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC--CCccHH-------HH
Q 020924          140 GQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK--VNTSSL-------VL  207 (319)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~--~~~~~~-------~~  207 (319)
                                       ....|+.||.+.+.+++.++.+   +|++++.++||.+.++.....  ......       ..
T Consensus       157 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  219 (269)
T 2h7i_A          157 -----------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE  219 (269)
T ss_dssp             -----------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHH
Confidence                             1466999999999999888765   489999999999977631100  000000       00


Q ss_pred             HHHHhcCccccCCccc-ccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          208 IKLLKEGYESLENKLR-MIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       208 ~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      .......      +.. .+..++|+|+++++++.....  .| .+.++|
T Consensus       220 ~~~~~~~------p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  262 (269)
T 2h7i_A          220 EGWDQRA------PIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  262 (269)
T ss_dssp             HHHHHHC------TTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HhhhccC------CcccCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence            1111111      223 478999999999999975432  44 345554

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.91  E-value=6.7e-23  Score=177.47  Aligned_cols=210  Identities=18%  Similarity=0.154  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCCh-hhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDY-DSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~-~~~~~~~~-----   75 (319)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+. .....++... +.++.++.+|++|. +.+..+++     
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKG-HEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999999986643 2233333332 34799999999998 77776654     


Q ss_pred             --CcceEEEecccCCCC----------------------------------CCCCccchhhhhHHHHHHHHHHHHHh---
Q 020924           76 --GCNGVFHIACPAPST----------------------------------TVPNPQMELLEPAVKGTLNVVKACLE---  116 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~----------------------------------~~~~~~~~~~~~Nv~~~~~l~~~~~~---  116 (319)
                        .+|+||||||.....                                  ...+.+...+++|+.++.++++++..   
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence              689999999975321                                  01122345689999999999998864   


Q ss_pred             -CCCCEEEEeccccccccCCCCC----------------------------CCcccCCCCCCCccccccCCchHHhhHHH
Q 020924          117 -AKVKRVIVVSSGVAVGLNPRWP----------------------------KGQIMDETCWSDKEYCRTTNNWYCLSKTE  167 (319)
Q Consensus       117 -~~~~~iv~~SS~~~~~~~~~~~----------------------------~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~  167 (319)
                       .+.++||++||..++.+.....                            ......+..+      +.+...|+.||.+
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~Y~~SK~a  242 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW------PSFGAAYTTSKAC  242 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC------CSSCHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC------cccchhhHHHHHH
Confidence             3556999999987765431000                            0000000000      1225679999999


Q ss_pred             HHHHHHHhhhhC-CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC
Q 020924          168 AESEALEFGKKT-GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       168 ~e~~~~~~~~~~-~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      .+.+++.+++++ +++++.++||.|.++.....                        ....+++.++.++.++..+.
T Consensus       243 ~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~~------------------------~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          243 LNAYTRVLANKIPKFQVNCVCPGLVKTEMNYGI------------------------GNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHHHHHHCTTSEEEEECCCSBCSGGGTTC------------------------CSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHhhcCCceEEEecCCceecCCcCCC------------------------CCCCHHHHHHHHHHHHhCCC
Confidence            999999998875 69999999999987753211                        12478899999998887554

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.90  E-value=7e-23  Score=185.25  Aligned_cols=217  Identities=15%  Similarity=0.100  Sum_probs=155.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ++++++|||||+|+||.+++++|+++|++|++++|+............    .+++++.+|++|.++++++++       
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~----~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK----VGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH----HTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH----cCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999987543222111111    246789999999999888764       


Q ss_pred             C-cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 G-CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~-~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      + +|+||||||......    ..+.+...+++|+.++.++.+++...    +..+||++||.+++.+.++          
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g----------  356 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG----------  356 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT----------
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC----------
Confidence            3 899999999765431    12334678999999999999999876    5579999999888776542          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.+|.+.+.+++.++.+   +|++++.++||.+.++........    .......     .....
T Consensus       357 -----------~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~-----~~~l~  416 (454)
T 3u0b_A          357 -----------QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA----TREVGRR-----LNSLF  416 (454)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------CHHHHH-----SBTTS
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh----hHHHHHh-----hcccc
Confidence                       566999999988888877654   489999999999988754322110    0011111     01334


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .+..++|+|+++++++....  ..| .+.++|.
T Consensus       417 r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          417 QGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             SCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             CCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence            56789999999999997543  244 4566553

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.90  E-value=7.6e-23  Score=177.30  Aligned_cols=208  Identities=17%  Similarity=0.131  Sum_probs=147.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcC---------CChhhHHHHHhhhccCCCeEEEEccCCChhhHH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTARE---------PSDEKNARLYELEKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      |+|++|+++||||+|+||++++++|+++|++|++.+|.         ... ......++.....   ...+|+++.+++.
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~-~~~~~~~l~~~~~---~~~~D~~~~~~~~   80 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSA-ADKVVEEIRRRGG---KAVANYDSVEAGE   80 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHH-HHHHHHHHHHTTC---EEEEECCCGGGHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHH-HHHHHHHHHhhCC---eEEEeCCCHHHHH
Confidence            55778999999999999999999999999999997653         221 1122233322222   2347999988776


Q ss_pred             HHhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCC
Q 020924           72 SAIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPR  136 (319)
Q Consensus        72 ~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~  136 (319)
                      ++++       .+|+||||||......    ..+.++..+++|+.++.++++++..    .+.++||++||....++.+.
T Consensus        81 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           81 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            6543       5899999999754321    1233467899999999999998853    46679999999877665431


Q ss_pred             CCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhc
Q 020924          137 WPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKE  213 (319)
Q Consensus       137 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~  213 (319)
                                           ...|+.||.+.+.+.+.++.+   +|++++.++|+.+ ++.....  ...         
T Consensus       161 ---------------------~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~--~~~---------  207 (319)
T 1gz6_A          161 ---------------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV--MPE---------  207 (319)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG--SCH---------
T ss_pred             ---------------------CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc--CCh---------
Confidence                                 456999999999999888765   4899999999987 4321110  000         


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccCCC-Cc-eEEEec
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKAEA-EG-RYICTA  252 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~-~~~~~~  252 (319)
                             ....+++++|+|.++++++..+.. .| .|.++|
T Consensus       208 -------~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~G  241 (319)
T 1gz6_A          208 -------DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGA  241 (319)
T ss_dssp             -------HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEET
T ss_pred             -------hhhccCCHHHHHHHHHHHhCchhhcCCCEEEECC
Confidence                   112356899999999999876432 34 455654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.89  E-value=2.6e-22  Score=183.20  Aligned_cols=225  Identities=18%  Similarity=0.144  Sum_probs=161.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc---
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVGC---   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---   77 (319)
                      .+++||||||+|+||++++++|+++|++ |++++|+....  ......++...+.++.++.+|++|.+++.++++.+   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            3589999999999999999999999985 99999986421  12222333333457899999999999999998764   


Q ss_pred             ---ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           78 ---NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        78 ---d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                         |+|||+||......    ..+.+...+++|+.++.++.+++.+.+.++||++||.+++++.++              
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g--------------  370 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG--------------  370 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT--------------
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC--------------
Confidence               99999999764321    112245678899999999999999888899999999887776543              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHH
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRD  230 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  230 (319)
                             ...|+.+|...+.+..++.. .|+++++++||.+.+++....      .....       .......+++++|
T Consensus       371 -------~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~~------~~~~~-------~~~~g~~~i~~e~  429 (486)
T 2fr1_A          371 -------LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG------PVADR-------FRRHGVIEMPPET  429 (486)
T ss_dssp             -------CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-------------------------CTTTTEECBCHHH
T ss_pred             -------CHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccch------hHHHH-------HHhcCCCCCCHHH
Confidence                   34599999999998877655 599999999999987642111      00000       0112235789999


Q ss_pred             HHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHh
Q 020924          231 VAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSL  267 (319)
Q Consensus       231 ~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~  267 (319)
                      +++++..++..+..  .+.+.+  +.|..+...+...
T Consensus       430 ~a~~l~~~l~~~~~--~~~v~~--~d~~~~~~~~~~~  462 (486)
T 2fr1_A          430 ACRALQNALDRAEV--CPIVID--VRWDRFLLAYTAQ  462 (486)
T ss_dssp             HHHHHHHHHHTTCS--SCEECE--ECHHHHHHHHTSS
T ss_pred             HHHHHHHHHhCCCC--eEEEEe--CCHHHHhhhhccc
Confidence            99999999986543  222222  4566666555443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.89  E-value=2.7e-22  Score=172.63  Aligned_cols=225  Identities=14%  Similarity=0.080  Sum_probs=148.6

Q ss_pred             CCCCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChh---------hHHHHHhhhccC--CCeEEEEcc----
Q 020924            1 MALEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDE---------KNARLYELEKAS--ENLKLFKAD----   63 (319)
Q Consensus         1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~--~~~~~~~~D----   63 (319)
                      |+|++|++|||||+  |+||++++++|+++|++|++++|++...         ....+.++....  .....+.+|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            56778999999999  9999999999999999999998752100         000111111000  012333443    


Q ss_pred             ----CC----C--------hhhHHHHhc-------CcceEEEecccCC--CC----CCCCccchhhhhHHHHHHHHHHHH
Q 020924           64 ----LL----D--------YDSVKSAIV-------GCNGVFHIACPAP--ST----TVPNPQMELLEPAVKGTLNVVKAC  114 (319)
Q Consensus        64 ----l~----~--------~~~~~~~~~-------~~d~vi~~a~~~~--~~----~~~~~~~~~~~~Nv~~~~~l~~~~  114 (319)
                          ++    |        .++++++++       .+|++|||||...  ..    ...+.+...+++|+.++.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                22    1        344554443       5899999998532  11    112234678999999999999999


Q ss_pred             HhCC--CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC-chHHhhHHHHHHHHHHhhhh----CCceEEEEe
Q 020924          115 LEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN-NWYCLSKTEAESEALEFGKK----TGLDVVTIC  187 (319)
Q Consensus       115 ~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lr  187 (319)
                      .+..  .++||++||..++.+.+.                     . ..|+.||.+.+.+.+.++.+    +|++++.++
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~  222 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERIIPG---------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS  222 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTT---------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             HHHhccCceEEEEeccccccCCCC---------------------cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEe
Confidence            8752  259999999876654321                     2 35999999999998887654    589999999


Q ss_pred             cCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          188 PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       188 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ||.+.++..... .....+........      ....+.+++|+|+++++++....  ..| .++++|.
T Consensus       223 PG~v~T~~~~~~-~~~~~~~~~~~~~~------p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          223 AGPLGSRAAKAI-GFIDTMIEYSYNNA------PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             ECCCBCCCSSCC-SHHHHHHHHHHHHS------SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccccccchhhhc-cccHHHHHHhhccC------CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            999999875432 11122222222222      23457799999999999987532  244 4566653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.89  E-value=2.1e-22  Score=168.36  Aligned_cols=213  Identities=14%  Similarity=0.088  Sum_probs=142.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-E--cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH-Hh---cCc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGT-A--REPSDEKNARLYELEKASENLKLFKADLLDYDSVKS-AI---VGC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~---~~~   77 (319)
                      +|+++||||+|+||++++++|+++|++|+++ +  |+.+... ....++    .+.++.  |..+.+.+.+ +.   ..+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~-~~~~~~----~~~~~~--~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ-RFESEN----PGTIAL--AEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHS----TTEEEC--CCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHH-HHHHHh----CCCccc--CHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999 5  8754321 112222    122222  4444433332 22   258


Q ss_pred             ceEEEecccCCC---CC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           78 NGVFHIACPAPS---TT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        78 d~vi~~a~~~~~---~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      |+||||||....   ..    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.          
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  143 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY----------  143 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT----------
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC----------
Confidence            999999996543   21    122346789999999999999886    345679999999877654321          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCC---CCCCCccHHHHHHHHh-cCccccC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLL---QSKVNTSSLVLIKLLK-EGYESLE  219 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~---~~~~~~~~~~~~~~~~-~~~~~~~  219 (319)
                                 ...|+.||.+.+.+++.++.+   +|++++.++||.+.++..   ....  .......... ..     
T Consensus       144 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~-----  205 (244)
T 1zmo_A          144 -----------NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWE--NNPELRERVDRDV-----  205 (244)
T ss_dssp             -----------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHH--HCHHHHHHHHHHC-----
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccccc--chHHHHHHHhcCC-----
Confidence                       455999999999998887655   489999999999987753   1100  0011111111 11     


Q ss_pred             CcccccccHHHHHHHHHHhhccCCC--Cc-eEEEecc
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTAH  253 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  253 (319)
                       ....+.+++|+|+++++++.....  .| .+.++|.
T Consensus       206 -p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          206 -PLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             -TTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             -CCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence             234578999999999999976432  34 4455553

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.88  E-value=4.3e-21  Score=175.83  Aligned_cols=226  Identities=15%  Similarity=0.119  Sum_probs=164.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d   78 (319)
                      .+++||||||+|+||++++++|+++|+ +|++++|+....  ......++...+.+++++.+|++|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            358999999999999999999999999 589999976421  1223334443445789999999999999999975  99


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCcccCCCCCCCccc
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  153 (319)
                      +|||+||......    ..+.+...+++|+.++.++.+++... +.++||++||.+++++.++                 
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g-----------------  400 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG-----------------  400 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT-----------------
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC-----------------
Confidence            9999999765321    11223567889999999999998876 7789999999877766532                 


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAE  233 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  233 (319)
                          ...|+.+|...+.+++++.. .|+++++++||.+.+.+...  ....   .....        ....+++++|+++
T Consensus       401 ----~~~YaaaKa~ld~la~~~~~-~gi~v~sv~pG~~~~tgm~~--~~~~---~~~~~--------~g~~~l~~e~~a~  462 (511)
T 2z5l_A          401 ----QGAYAAANAALDALAERRRA-AGLPATSVAWGLWGGGGMAA--GAGE---ESLSR--------RGLRAMDPDAAVD  462 (511)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHT-TTCCCEEEEECCBCSTTCCC--CHHH---HHHHH--------HTBCCBCHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHHHHH-cCCcEEEEECCcccCCcccc--cccH---HHHHh--------cCCCCCCHHHHHH
Confidence                46699999999999887754 59999999999884322111  1111   11111        1124689999999


Q ss_pred             HHHHhhccCCCCceEEEecccCCHHHHHHHHHHhC
Q 020924          234 ALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLY  268 (319)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~  268 (319)
                      ++..++..+..  .+.+.  .+.|..+...+....
T Consensus       463 ~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~  493 (511)
T 2z5l_A          463 ALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR  493 (511)
T ss_dssp             HHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred             HHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence            99999986543  22332  345777776665544

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.87  E-value=4.3e-21  Score=174.58  Aligned_cols=206  Identities=17%  Similarity=0.154  Sum_probs=154.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-----
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVG-----   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   76 (319)
                      ++++|||||+|+||.+++++|+++|+ .|++++|+....  ......++...+.++.++.+|++|.+++.++++.     
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            37999999999999999999999998 788888864321  2233344444456899999999999999998863     


Q ss_pred             -cceEEEecccC-CCCCC----CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           77 -CNGVFHIACPA-PSTTV----PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        77 -~d~vi~~a~~~-~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                       +|+||||||.. .....    .+.+...+++|+.++.++.+++.+.+.++||++||.+++.+.++              
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g--------------  384 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG--------------  384 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT--------------
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC--------------
Confidence             79999999976 22211    12246788999999999999999888899999999988876643              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHH
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRD  230 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  230 (319)
                             ...|+.+|...+.+.+++.. .|++++.|.||.+.+.+........    ....+.        ....+.+++
T Consensus       385 -------~~~YaAaKa~ldala~~~~~-~Gi~v~sV~pG~w~~~gm~~~~~~~----~~l~~~--------g~~~l~pe~  444 (496)
T 3mje_A          385 -------QPGYAAANAYLDALAEHRRS-LGLTASSVAWGTWGEVGMATDPEVH----DRLVRQ--------GVLAMEPEH  444 (496)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHH-TTCCCEEEEECEESSSCC------C----HHHHHT--------TEEEECHHH
T ss_pred             -------cHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCcccCCccccChHHH----HHHHhc--------CCCCCCHHH
Confidence                   46699999999998887655 5999999999998766533211111    111111        122468999


Q ss_pred             HHHHHHHhhccCCC
Q 020924          231 VAEALLLAYEKAEA  244 (319)
Q Consensus       231 ~a~~~~~~~~~~~~  244 (319)
                      .++++..++..+..
T Consensus       445 ~~~~l~~~l~~~~~  458 (496)
T 3mje_A          445 ALGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHcCCCc
Confidence            99999999987643

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.86  E-value=5.2e-21  Score=165.86  Aligned_cols=226  Identities=14%  Similarity=0.078  Sum_probs=145.3

Q ss_pred             CCCCCCeEEEeCc--chHHHHHHHHHHHHCCCeEEEEEcCCC---------hhhHHHHHhhhccCC---CeEEEEccC--
Q 020924            1 MALEKERVCVTGA--GGFLASWVVKLLLSRDYFVHGTAREPS---------DEKNARLYELEKASE---NLKLFKADL--   64 (319)
Q Consensus         1 m~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~~---~~~~~~~Dl--   64 (319)
                      |+|++|+++||||  +|+||++++++|+++|++|++++|++.         ......+.++.. +.   ...++.+|+  
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPD-GSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTT-SCBCCCSCEEECCTTC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhc-cccccccccccccccc
Confidence            4567899999999  899999999999999999999987531         001111122211 11   124444443  


Q ss_pred             ----------C--------ChhhHHHHhc-------CcceEEEecccCC--CC----CCCCccchhhhhHHHHHHHHHHH
Q 020924           65 ----------L--------DYDSVKSAIV-------GCNGVFHIACPAP--ST----TVPNPQMELLEPAVKGTLNVVKA  113 (319)
Q Consensus        65 ----------~--------~~~~~~~~~~-------~~d~vi~~a~~~~--~~----~~~~~~~~~~~~Nv~~~~~l~~~  113 (319)
                                +        |.+++..+++       .+|++|||||...  ..    ...+.+...+++|+.++.+++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                      2        2345555443       6899999999642  11    11223467899999999999999


Q ss_pred             HHhCC--CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh----CCceEEEEe
Q 020924          114 CLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK----TGLDVVTIC  187 (319)
Q Consensus       114 ~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lr  187 (319)
                      +.+..  .++||++||..++.+.+.+                    ...|+.||.+.+.+.+.++.+    +|++++.|+
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~~~~~~--------------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~  223 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAERVVPGY--------------------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAIS  223 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTSCCTTC--------------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             HHHHHhcCCEEEEEecccccccCCCc--------------------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEe
Confidence            97652  2599999998765543210                    135999999999888877644    589999999


Q ss_pred             cCcccCCCCCCCC-----CccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCce-EEEecc
Q 020924          188 PNLVLGPLLQSKV-----NTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEGR-YICTAH  253 (319)
Q Consensus       188 p~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~  253 (319)
                      ||.+.++......     ..............      ....+..++|+|+++++++....  ..|. +.+.|.
T Consensus       224 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          224 AGPLKSRAASAIGKSGEKSFIDYAIDYSYNNA------PLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             ECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHS------SSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cccccchhhhhccccccchhHHHHHHHHhccC------CCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            9999775321100     01111111111111      23456799999999999997532  2454 455553

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.85  E-value=3.9e-20  Score=170.16  Aligned_cols=226  Identities=15%  Similarity=0.081  Sum_probs=161.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCe-EEEE-EcCCCh------------hhHHHHHhhhccCCCeEEEEccCCChhh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYF-VHGT-AREPSD------------EKNARLYELEKASENLKLFKADLLDYDS   69 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   69 (319)
                      .++++|||||+|+||.+++++|+++|++ |+++ +|+..+            .......++...+.++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4589999999999999999999999998 5555 777422            1223334444445679999999999999


Q ss_pred             HHHHhcC------cceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhCC-----CCEEEEeccccccccC
Q 020924           70 VKSAIVG------CNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEAK-----VKRVIVVSSGVAVGLN  134 (319)
Q Consensus        70 ~~~~~~~------~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~~-----~~~iv~~SS~~~~~~~  134 (319)
                      +.++++.      +|+||||||.......    .+.+...+++|+.|+.++.+++....     .++||++||.+++.+.
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9998864      6999999997654321    12246688999999999999998876     7899999999887765


Q ss_pred             CCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC
Q 020924          135 PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG  214 (319)
Q Consensus       135 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~  214 (319)
                      ++                     ...|+.+|...+.+..++.. .|++++.|.||.+-++.....     .. ...+.. 
T Consensus       410 ~g---------------------~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~~tgm~~~~-----~~-~~~~~~-  460 (525)
T 3qp9_A          410 AG---------------------QGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPWEGSRVTEG-----AT-GERLRR-  460 (525)
T ss_dssp             TT---------------------CHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCBTTSGGGSS-----HH-HHHHHH-
T ss_pred             CC---------------------CHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCccccccccch-----hh-HHHHHh-
Confidence            43                     46699999999998776654 499999999999944332111     11 111111 


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhC
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLY  268 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~  268 (319)
                            .....+.++++++++..++..+..    .+.-..+.|..+...+....
T Consensus       461 ------~g~~~l~pee~a~~l~~~l~~~~~----~v~v~~~dw~~~~~~~~~~~  504 (525)
T 3qp9_A          461 ------LGLRPLAPATALTALDTALGHGDT----AVTIADVDWSSFAPGFTTAR  504 (525)
T ss_dssp             ------TTBCCBCHHHHHHHHHHHHHHTCS----EEEECCBCHHHHHHHHHSSS
T ss_pred             ------cCCCCCCHHHHHHHHHHHHhCCCC----eEEEEeCCHHHHHhhccccC
Confidence                  112357999999999999987543    12223455666666655443

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.85  E-value=6.4e-21  Score=165.65  Aligned_cols=230  Identities=12%  Similarity=0.065  Sum_probs=125.9

Q ss_pred             CCCCCCeEEEeCc--chHHHHHHHHHHHHCCCeEEEEEcCC---------ChhhHH------------HHHhhhccC---
Q 020924            1 MALEKERVCVTGA--GGFLASWVVKLLLSRDYFVHGTAREP---------SDEKNA------------RLYELEKAS---   54 (319)
Q Consensus         1 m~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~------------~~~~~~~~~---   54 (319)
                      |+|++|++|||||  +|+||++++++|+++|++|++++|++         ......            ...++...+   
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4467899999999  89999999999999999999998642         000000            011111000   


Q ss_pred             CCeEEEEccC------------CC--------hhhHHHHhc-------CcceEEEecccCC--CC----CCCCccchhhh
Q 020924           55 ENLKLFKADL------------LD--------YDSVKSAIV-------GCNGVFHIACPAP--ST----TVPNPQMELLE  101 (319)
Q Consensus        55 ~~~~~~~~Dl------------~~--------~~~~~~~~~-------~~d~vi~~a~~~~--~~----~~~~~~~~~~~  101 (319)
                      ...+++.+|+            +|        .+++.++++       .+|++|||||...  ..    ...+.+...++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence            0134455443            22        234554443       6899999999642  11    11223467889


Q ss_pred             hHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCC-chHHhhHHHHHHHHHHhhhh
Q 020924          102 PAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTN-NWYCLSKTEAESEALEFGKK  178 (319)
Q Consensus       102 ~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~  178 (319)
                      +|+.++.++++++.+.-  .++||++||..++.+.+.                     . ..|+.||.+.+.+++.++.+
T Consensus       165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~---------------------~~~~Y~asKaal~~l~~~la~e  223 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG---------------------YGGGMSSAKAALESDCRTLAFE  223 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------THHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCc---------------------cchhhHHHHHHHHHHHHHHHHH
Confidence            99999999999998752  259999999876554321                     2 35999999999888877654


Q ss_pred             ----CCceEEEEecCcccCCCCCCCCCc-cHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEE
Q 020924          179 ----TGLDVVTICPNLVLGPLLQSKVNT-SSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYIC  250 (319)
Q Consensus       179 ----~~~~~~~lrp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~  250 (319)
                          +|++++.|+||.+.++........ ...+...... . .........+..++|+|+++++++....  ..| .+.+
T Consensus       224 l~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~-~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~v  301 (319)
T 2ptg_A          224 AGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAID-Y-SEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYV  301 (319)
T ss_dssp             HHHHHCCEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             hccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHH-H-HhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence                589999999999988753211000 0000000000 0 0000133457799999999999997532  245 4455


Q ss_pred             ecc
Q 020924          251 TAH  253 (319)
Q Consensus       251 ~~~  253 (319)
                      .|.
T Consensus       302 dGG  304 (319)
T 2ptg_A          302 DNG  304 (319)
T ss_dssp             STT
T ss_pred             CCC
Confidence            553

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.85  E-value=2.1e-20  Score=175.33  Aligned_cols=198  Identities=16%  Similarity=0.077  Sum_probs=138.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc---------CCChhhHHHHHhhhccCCCeEEEEccCCChhhHH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR---------EPSDEKNARLYELEKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      |++++|+++||||+|+||++++++|+++|++|++++|         +... .....+++......   ..+|++|.+++.
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~-~~~~~~~i~~~~~~---~~~D~~d~~~~~   90 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRA-ADIVVDEIRKAGGE---AVADYNSVIDGA   90 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------C-HHHHHHHHHHTTCC---EEECCCCGGGHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHH-HHHHHHHHHHhCCe---EEEEeCCHHHHH
Confidence            4678999999999999999999999999999999987         2221 12222333322222   247999998888


Q ss_pred             HHhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCC
Q 020924           72 SAIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPR  136 (319)
Q Consensus        72 ~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~  136 (319)
                      ++++       .+|++|||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||.++.++.++
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~  170 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG  170 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            8775       4799999999764432    123357789999999999999984    445679999999888776532


Q ss_pred             CCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhc
Q 020924          137 WPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKE  213 (319)
Q Consensus       137 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~  213 (319)
                                           ...|+.||.+.+.+++.++.+   +|++++.+.|+.+ .+.....   ..         
T Consensus       171 ---------------------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~---~~---------  216 (613)
T 3oml_A          171 ---------------------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGI---LP---------  216 (613)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC---CC---------
T ss_pred             ---------------------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhc---cc---------
Confidence                                 466999999999998888765   4899999999864 2221111   00         


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccC
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                            ......+.++|+|.++++++...
T Consensus       217 ------~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          217 ------DILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             ------HHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             ------hhhhhcCCHHHHHHHHHHhcCCC
Confidence                  01223458999999999999765

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.84  E-value=1.8e-21  Score=169.46  Aligned_cols=177  Identities=19%  Similarity=0.183  Sum_probs=128.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCChhhH-HHHHhhhccCCCeEEEEccCCChhhHHH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSDEKN-ARLYELEKASENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (319)
                      |.+ .|+|+||||+||||++++..|+++|+       +|+++++....... .....+..  ..+.++ .|+++..++.+
T Consensus         1 m~~-~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~--~~~~~~-~di~~~~~~~~   76 (327)
T 1y7t_A            1 MKA-PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED--CAFPLL-AGLEATDDPKV   76 (327)
T ss_dssp             CCC-CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT--TTCTTE-EEEEEESCHHH
T ss_pred             CCC-CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc--cccccc-CCeEeccChHH
Confidence            443 36899999999999999999999886       89998876421111 11112211  112233 57777777888


Q ss_pred             HhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEeccccccccCCCCCCCcccC-CCC-C
Q 020924           73 AIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSSGVAVGLNPRWPKGQIMD-ETC-W  148 (319)
Q Consensus        73 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS~~~~~~~~~~~~~~~~~-E~~-~  148 (319)
                      +++++|+|||+||..... ..++ ..+++.|+.++.++++++++++ .+ ++|++||.....        .+.. |.+ .
T Consensus        77 a~~~~D~Vih~Ag~~~~~-~~~~-~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~--------~~~~~~~~~~  146 (327)
T 1y7t_A           77 AFKDADYALLVGAAPRKA-GMER-RDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN--------ALIAYKNAPG  146 (327)
T ss_dssp             HTTTCSEEEECCCCCCCT-TCCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH--------HHHHHHTCTT
T ss_pred             HhCCCCEEEECCCcCCCC-CCCH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh--------HHHHHHHcCC
Confidence            899999999999976543 2333 7889999999999999999986 65 888888743111        1111 111 1


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCC
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQ  197 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~  197 (319)
                      ..      |.++|+.+|...|+++..+++.+|++++++||++|||++..
T Consensus       147 ~~------p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          147 LN------PRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             SC------GGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             CC------hhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            11      25679999999999999999888999999999999998753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.82  E-value=1.8e-19  Score=157.13  Aligned_cols=171  Identities=12%  Similarity=0.069  Sum_probs=122.8

Q ss_pred             CCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChh-------hHHHHH-hhhc---cCCCeEEEEccCCCh--h
Q 020924            4 EKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDE-------KNARLY-ELEK---ASENLKLFKADLLDY--D   68 (319)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~-~~~~---~~~~~~~~~~Dl~~~--~   68 (319)
                      ++|+++||||++  +||.+++++|+++|++|++.+|++...       ...... ....   ....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            368999999875  999999999999999999887654110       000000 0000   113468888999877  6


Q ss_pred             ------------------hHHHHhc-------CcceEEEecccCC--CC----CCCCccchhhhhHHHHHHHHHHHHHhC
Q 020924           69 ------------------SVKSAIV-------GCNGVFHIACPAP--ST----TVPNPQMELLEPAVKGTLNVVKACLEA  117 (319)
Q Consensus        69 ------------------~~~~~~~-------~~d~vi~~a~~~~--~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~  117 (319)
                                        ++.++++       .+|++|||||...  ..    ...+.+...+++|+.++..+++++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              6665543       5799999999632  11    112335678999999999999999865


Q ss_pred             CC--CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc-hHHhhHHHHHHHHHHhhhh----CCceEEEEecCc
Q 020924          118 KV--KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN-WYCLSKTEAESEALEFGKK----TGLDVVTICPNL  190 (319)
Q Consensus       118 ~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~~~~~~~lrp~~  190 (319)
                      ..  .+||++||..+..+.+.                     .. .|+.||.+.+.+.+.++.+    +|++++.+.||.
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~---------------------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~  219 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPG---------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP  219 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTT---------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             HhhCCeEEEEeCccccCCCCc---------------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecce
Confidence            22  58999999877654432                     22 5999999999888876543    489999999999


Q ss_pred             ccCCC
Q 020924          191 VLGPL  195 (319)
Q Consensus       191 v~G~~  195 (319)
                      +.++.
T Consensus       220 v~T~~  224 (329)
T 3lt0_A          220 LKSRA  224 (329)
T ss_dssp             CCCHH
T ss_pred             eechh
Confidence            98764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.79  E-value=3.9e-18  Score=159.39  Aligned_cols=208  Identities=15%  Similarity=0.110  Sum_probs=143.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccC-CChhhHH-HH---hcC
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL-LDYDSVK-SA---IVG   76 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~-~~---~~~   76 (319)
                      ++++|+++||||++.||++++++|+++|++|++.+|.....   ..+++...+.++..+.+|+ .+.+.+. .+   +..
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~---~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK---TVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHH---HHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            56789999999999999999999999999999988743322   2222322234566777888 5544332 22   346


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      +|++|||||......    ..+.++..+++|+.++.++++++..    .+-.+||++||.++..+.++            
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~------------  463 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG------------  463 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC------------
Confidence            899999999754321    2234677899999999999988864    34569999999887765432            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.||.+...+.+.++.+   +|++++.|.|+. .++....       ....           ...+.
T Consensus       464 ---------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~-------~~~~-----------~~~~~  515 (604)
T 2et6_A          464 ---------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS-------IMRE-----------QDKNL  515 (604)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------------CCS
T ss_pred             ---------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc-------cCch-----------hhccC
Confidence                     456999999999888877654   589999999983 3332110       0000           11234


Q ss_pred             ccHHHHHHHHHHhhccCC-CCc-eEEEec
Q 020924          226 VDVRDVAEALLLAYEKAE-AEG-RYICTA  252 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~-~~~-~~~~~~  252 (319)
                      ..++|+|.++++++.... ..| .+.+.|
T Consensus       516 ~~pe~vA~~v~~L~s~~~~itG~~~~vdG  544 (604)
T 2et6_A          516 YHADQVAPLLVYLGTDDVPVTGETFEIGG  544 (604)
T ss_dssp             SCGGGTHHHHHHTTSTTCCCCSCEEEEET
T ss_pred             CCHHHHHHHHHHHhCCccCCCCcEEEECC
Confidence            589999999999986533 244 444443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.78  E-value=8.6e-18  Score=169.72  Aligned_cols=207  Identities=15%  Similarity=0.106  Sum_probs=143.7

Q ss_pred             CCCCCCeEEEeCcchH-HHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh----hccCCCeEEEEccCCChhhHHHHhc
Q 020924            1 MALEKERVCVTGAGGF-LASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL----EKASENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      |+|++|++|||||+|+ ||.+++++|+++|++|++++++..........++    ...+.++.++.+|++|.+++.++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            5678899999999998 9999999999999999998543332222222222    1123568899999999999887763


Q ss_pred             -------------CcceEEEecccCCCC-CC------CCccchhhhhHHHHHHHHHHHHHhCC------CCEEEEecccc
Q 020924           76 -------------GCNGVFHIACPAPST-TV------PNPQMELLEPAVKGTLNVVKACLEAK------VKRVIVVSSGV  129 (319)
Q Consensus        76 -------------~~d~vi~~a~~~~~~-~~------~~~~~~~~~~Nv~~~~~l~~~~~~~~------~~~iv~~SS~~  129 (319)
                                   .+|+||||||..... ..      .+.+...+++|+.++.+++++++...      .++||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                         489999999975432 11      12346789999999999999884321      25899999976


Q ss_pred             ccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHH-HHHhhhhCC--ceEEEEecCcccC-CCCCCCCCccHH
Q 020924          130 AVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESE-ALEFGKKTG--LDVVTICPNLVLG-PLLQSKVNTSSL  205 (319)
Q Consensus       130 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~~lrp~~v~G-~~~~~~~~~~~~  205 (319)
                      +..+.                       ...|+.||.+.+.+ .+.++++++  ++++.++||.+.| +..... .... 
T Consensus       831 g~~gg-----------------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~~~-  885 (1887)
T 2uv8_A          831 GTFGG-----------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NIIA-  885 (1887)
T ss_dssp             TCSSC-----------------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CTTH-
T ss_pred             hccCC-----------------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hhHH-
Confidence            55431                       34499999999988 555554432  9999999999984 432211 1111 


Q ss_pred             HHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          206 VLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                         ......      .. .+..++|+|+++++++...
T Consensus       886 ---~~~~~~------pl-r~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          886 ---EGIEKM------GV-RTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             ---HHHHTT------SC-CCEEHHHHHHHHHGGGSHH
T ss_pred             ---HHHHhc------CC-CCCCHHHHHHHHHHHhCCC
Confidence               111111      11 3458999999999999764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.78  E-value=2.4e-18  Score=150.12  Aligned_cols=210  Identities=13%  Similarity=-0.009  Sum_probs=142.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCCChhhH----------HH-HHhhhccCCCeEEEEccCCChhhHH
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREPSDEKN----------AR-LYELEKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------~~-~~~~~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      .+|++|||||++.||.++++.|++ .|++|++++|+......          .. .+.+...+..+..+.+|++|.+++.
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            468999999999999999999999 99999999987553210          11 1122223457888999999999888


Q ss_pred             HHhc-------CcceEEEecccCC-------------CC-------------------------CCCCccchhhhhHHHH
Q 020924           72 SAIV-------GCNGVFHIACPAP-------------ST-------------------------TVPNPQMELLEPAVKG  106 (319)
Q Consensus        72 ~~~~-------~~d~vi~~a~~~~-------------~~-------------------------~~~~~~~~~~~~Nv~~  106 (319)
                      ++++       .+|++|||||...             ..                         ...+.++..+++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            7764       4799999998631             00                         1112345667788777


Q ss_pred             HH-HHHHHHHhCC----CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---
Q 020924          107 TL-NVVKACLEAK----VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---  178 (319)
Q Consensus       107 ~~-~l~~~~~~~~----~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---  178 (319)
                      .. .++.++...+    -.+||++||..+..+.+.+                   ....|+.||.+.+.+.+.++.+   
T Consensus       206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~-------------------~~~aY~AaKaal~~ltrsLA~Ela~  266 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY-------------------WNGSIGAAKKDLDQKVLAIRESLAA  266 (405)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT-------------------TTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc-------------------cchHHHHHHHHHHHHHHHHHHHhCc
Confidence            76 5666654322    2489999998765544321                   0266999999999888887655   


Q ss_pred             C-CceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          179 T-GLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       179 ~-~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                      + |+++..+.|+.+-++........ +.......+        ....+-..+|+++++.+++..
T Consensus       267 ~~GIRVNaVaPG~i~T~~s~~ip~~-p~y~~~l~~--------~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          267 HGGGDARVSVLKAVVSQASSAIPMM-PLYLSLLFK--------VMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             TTSCEEEEEECCCCCCHHHHTSTTH-HHHHHHHHH--------HHHHHTCCCCHHHHHHHHHHH
T ss_pred             ccCeEEEEEEeCCCcCchhhcCCCC-cHHHHHHHH--------HHhcCCCcHHHHHHHHHHHhc
Confidence            5 89999999999987754322211 111111110        122344678899999888864

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.77  E-value=1.5e-17  Score=167.59  Aligned_cols=207  Identities=14%  Similarity=0.067  Sum_probs=144.1

Q ss_pred             CCCCCCeEEEeCcchH-HHHHHHHHHHHCCCeEEEEEcCCChhhHHHH----HhhhccCCCeEEEEccCCChhhHHHHhc
Q 020924            1 MALEKERVCVTGAGGF-LASWVVKLLLSRDYFVHGTAREPSDEKNARL----YELEKASENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      |+|++|++|||||+|+ ||.+++++|+++|++|++++++.........    .++...+.++.++.+|++|.+++.++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            5678899999999999 9999999999999999998654433222222    2222223568899999999999988763


Q ss_pred             -----------CcceEEEecccCCCC-CC--C----CccchhhhhHHHHHHHHHHHHH--hC----CCCEEEEecccccc
Q 020924           76 -----------GCNGVFHIACPAPST-TV--P----NPQMELLEPAVKGTLNVVKACL--EA----KVKRVIVVSSGVAV  131 (319)
Q Consensus        76 -----------~~d~vi~~a~~~~~~-~~--~----~~~~~~~~~Nv~~~~~l~~~~~--~~----~~~~iv~~SS~~~~  131 (319)
                                 .+|+||||||..... ..  .    +.+...+++|+.++.++++.++  ..    +.++||++||.++.
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                       479999999975432 11  1    2346789999999999988743  22    23589999997665


Q ss_pred             ccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh-C--CceEEEEecCccc-CCCCCCCCCccHHHH
Q 020924          132 GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK-T--GLDVVTICPNLVL-GPLLQSKVNTSSLVL  207 (319)
Q Consensus       132 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~lrp~~v~-G~~~~~~~~~~~~~~  207 (319)
                      .+.                       ...|+.||.+.+.++..+..+ .  +++++.|.||.+. ++....     ....
T Consensus       808 ~gg-----------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----~~~~  859 (1878)
T 2uv9_A          808 FGN-----------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----NNLV  859 (1878)
T ss_dssp             SSC-----------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----HHHT
T ss_pred             cCC-----------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----chhh
Confidence            431                       234999999999887654332 1  3999999999987 543211     1111


Q ss_pred             HHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          208 IKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .......      .. .+..++|+|+++++++...
T Consensus       860 ~~~~~~~------pl-r~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          860 AEGVEKL------GV-RTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHHHTT------TC-CCBCHHHHHHHHHHHHSHH
T ss_pred             HHHHHhc------CC-CCCCHHHHHHHHHHHhCCc
Confidence            1222211      11 2458999999999998754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.77  E-value=9.3e-18  Score=156.85  Aligned_cols=225  Identities=15%  Similarity=0.109  Sum_probs=149.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC--------hhhHHHHHhhhccCCCeEEEEccCCChhhHHH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS--------DEKNARLYELEKASENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (319)
                      |++++|+++||||++.||++++++|+++|++|++.+|+..        .......+++...+..+   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            3467899999999999999999999999999999887641        11112223332222222   246666644443


Q ss_pred             Hh-------cCcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCC
Q 020924           73 AI-------VGCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRW  137 (319)
Q Consensus        73 ~~-------~~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~  137 (319)
                      ++       ..+|++|||||.....    ...+.++..+++|+.|+.++++++..    .+-.+||++||.++..+.++ 
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~-  159 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG-  159 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC-
Confidence            33       3589999999975332    12233577899999999999988864    34569999999887765532 


Q ss_pred             CCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC
Q 020924          138 PKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG  214 (319)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~  214 (319)
                                          ...|+.||.+...+.+.++.+   +|++++.|.|+ +.++..           ...   .
T Consensus       160 --------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~-----------~~~---~  204 (604)
T 2et6_A          160 --------------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMT-----------ESI---M  204 (604)
T ss_dssp             --------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHH-----------HTT---S
T ss_pred             --------------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccc-----------ccc---C
Confidence                                456999999999888887654   58999999996 322210           000   0


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCCC-Cc-eEEEec-------------------ccCCHHHHHHHHHHhC
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAEA-EG-RYICTA-------------------HMIRARDLVDKLKSLY  268 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~-~~~~~~-------------------~~~s~~e~~~~~~~~~  268 (319)
                          +........++|+|.++++++..... .| .+.+.|                   ...+..++.+.+.+..
T Consensus       205 ----~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  275 (604)
T 2et6_A          205 ----PPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEIL  275 (604)
T ss_dssp             ----CHHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHT
T ss_pred             ----ChhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhh
Confidence                00111235899999999999975421 23 333322                   2356678877776553

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.76  E-value=3.1e-18  Score=167.93  Aligned_cols=206  Identities=15%  Similarity=0.101  Sum_probs=142.4

Q ss_pred             CCCCCCeEEEeCcchH-HHHHHHHHHHHCCCeEEEEE-cCCChhhHHHHHhhh----ccCCCeEEEEccCCChhhHHHHh
Q 020924            1 MALEKERVCVTGAGGF-LASWVVKLLLSRDYFVHGTA-REPSDEKNARLYELE----KASENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      |+|++|++|||||+|+ ||++++++|+++|++|++++ |+.... .....++.    ..+.++.++.+|++|.+++.+++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~l-ee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV-TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTT-TTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHH-HHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            5677899999999998 99999999999999999984 544322 22222221    11346889999999999988876


Q ss_pred             c-------------CcceEEEecccCCCC-CC------CCccchhhhhHHHHHHHHHHHHHh--C----CCCEEEEeccc
Q 020924           75 V-------------GCNGVFHIACPAPST-TV------PNPQMELLEPAVKGTLNVVKACLE--A----KVKRVIVVSSG  128 (319)
Q Consensus        75 ~-------------~~d~vi~~a~~~~~~-~~------~~~~~~~~~~Nv~~~~~l~~~~~~--~----~~~~iv~~SS~  128 (319)
                      +             .+|+||||||..... ..      .+.+...+++|+.++.+++++++.  .    +.++||++||.
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence            3             489999999975432 11      122467899999999999998832  2    22589999997


Q ss_pred             cccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHH-HHHhhhhC--CceEEEEecCcccC-CCCCCCCCccH
Q 020924          129 VAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESE-ALEFGKKT--GLDVVTICPNLVLG-PLLQSKVNTSS  204 (319)
Q Consensus       129 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~--~~~~~~lrp~~v~G-~~~~~~~~~~~  204 (319)
                      ++..+.                       ...|+.||.+.+.+ .+.++++.  .++++.+.||.+.| +..... ... 
T Consensus       631 AG~~Gg-----------------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e~~-  685 (1688)
T 2pff_A          631 HGTFGG-----------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NII-  685 (1688)
T ss_dssp             TTTSSC-----------------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT-TTC-
T ss_pred             HhccCC-----------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc-hHH-
Confidence            655431                       34599999999998 44444433  28999999999984 332110 000 


Q ss_pred             HHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          205 LVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                         ......    .  .. .+..++|+|+++++++...
T Consensus       686 ---~~~l~~----i--pl-R~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          686 ---AEGIEK----M--GV-RTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             ---STTTSS----S--SC-CCCCCCTTHHHHHHHTSTT
T ss_pred             ---HHHHHh----C--CC-CCCCHHHHHHHHHHHhCCC
Confidence               000000    1  11 3458999999999999765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.76  E-value=4.6e-18  Score=149.69  Aligned_cols=210  Identities=11%  Similarity=-0.065  Sum_probs=139.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCCChhhH----------HHH-HhhhccCCCeEEEEccCCChhhHH
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREPSDEKN----------ARL-YELEKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------~~~-~~~~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      .+|++|||||++.||.++++.|++ .|++|++++|+......          ... +.+...+..+..+.+|++|.++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            368999999999999999999999 99999999987653211          111 222233457888999999998887


Q ss_pred             HHh--------cCcceEEEecccC-------------CCCC-------------------------CCCccchhhhhHHH
Q 020924           72 SAI--------VGCNGVFHIACPA-------------PSTT-------------------------VPNPQMELLEPAVK  105 (319)
Q Consensus        72 ~~~--------~~~d~vi~~a~~~-------------~~~~-------------------------~~~~~~~~~~~Nv~  105 (319)
                      +++        ..+|++|||||..             ....                         ..+.++..+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            665        3479999999862             1000                         11123445566666


Q ss_pred             HHH-HHHHHHHhCC----CCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh--
Q 020924          106 GTL-NVVKACLEAK----VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK--  178 (319)
Q Consensus       106 ~~~-~l~~~~~~~~----~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--  178 (319)
                      +.. .++.++...+    -.+||++||..+..+.+.                   .....|+.||.+.+.+.+.++.+  
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~-------------------~~~~aY~ASKaAl~~lTrsLA~Ela  280 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI-------------------YWHGALGKAKVDLDRTAQRLNARLA  280 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH-------------------HTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC-------------------ccchHHHHHHHHHHHHHHHHHHHhC
Confidence            654 6666665432    248999999876543221                   01356999999999888887655  


Q ss_pred             -CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhcc
Q 020924          179 -TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       179 -~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                       +|++++.+.||.+-++....... .+.......  +      ..+.+-..+|+++++.+++..
T Consensus       281 ~~GIRVNaVaPG~i~T~~~~~ip~-~~~~~~~~~--~------~m~r~G~pEdva~~v~~L~sd  335 (422)
T 3s8m_A          281 KHGGGANVAVLKSVVTQASAAIPV-MPLYISMVY--K------IMKEKGLHEGTIEQLDRLFRE  335 (422)
T ss_dssp             TTTCEEEEEEECCCCCTTGGGSTH-HHHHHHHHH--H------HHHHTTCCCCHHHHHHHHHHH
T ss_pred             ccCEEEEEEEcCCCcChhhhcCCC-ChHHHHHHH--h------hhcCCcChHHHHHHHHHHhcc
Confidence             48999999999998876543211 111111110  0      112234678899999888854

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.72  E-value=5.6e-17  Score=156.03  Aligned_cols=207  Identities=17%  Similarity=0.118  Sum_probs=151.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHH-HCCC-eEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC---
Q 020924            4 EKERVCVTGAGGFLASWVVKLLL-SRDY-FVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVG---   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   76 (319)
                      .+++++||||+|.||+++++.|+ ++|+ .|++++|+....  ....++++...+.++.++.+|++|.+++.++++.   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            36899999999999999999999 7998 589999983321  2334455544456789999999999999998863   


Q ss_pred             ---cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           77 ---CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        77 ---~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                         +|+||||||......    ..+.+...+++|+.|+.++.+++.. .. +||++||.+++.+.++             
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g-------------  673 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGG-------------  673 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSS-------------
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCC-------------
Confidence               699999999764321    1233577889999999999999843 33 9999999988877653             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHH
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVR  229 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  229 (319)
                              ...|+.+|...+.+.+++.. .|++++.|.||.+-+.+...   .........+..       .....+..+
T Consensus       674 --------~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~~~---~~~~~~~~~~~~-------~g~~~l~~~  734 (795)
T 3slk_A          674 --------QGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGMAS---TLREAEQDRLAR-------SGLLPISTE  734 (795)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCHHH---HHHHHHHHHHHH-------TTBCCCCHH
T ss_pred             --------CHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchhhc---cccHHHHHHHHh-------cCCCCCCHH
Confidence                    46699999988888887766 49999999999887553110   000011111111       112346889


Q ss_pred             HHHHHHHHhhccCCC
Q 020924          230 DVAEALLLAYEKAEA  244 (319)
Q Consensus       230 D~a~~~~~~~~~~~~  244 (319)
                      +....+..++..+..
T Consensus       735 e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          735 EGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHhCCCc
Confidence            999999988877543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.72  E-value=1e-16  Score=142.19  Aligned_cols=211  Identities=11%  Similarity=-0.009  Sum_probs=137.7

Q ss_pred             CCCeEEEeCcchHHHHH--HHHHHHHCCCeEEEEEcCCChhh----------HHHHH-hhhccCCCeEEEEccCCChhhH
Q 020924            4 EKERVCVTGAGGFLASW--VVKLLLSRDYFVHGTAREPSDEK----------NARLY-ELEKASENLKLFKADLLDYDSV   70 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~-~~~~~~~~~~~~~~Dl~~~~~~   70 (319)
                      .+|++|||||++.||.+  ++++|++.|++|++++|+.....          ...+. .....+.++..+.+|++|.+++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence            47899999999999999  99999999999999999754321          12222 1222345788999999999988


Q ss_pred             HHHhc-------CcceEEEecccC-------------CCCC-------------------------CCCccchhhhhHHH
Q 020924           71 KSAIV-------GCNGVFHIACPA-------------PSTT-------------------------VPNPQMELLEPAVK  105 (319)
Q Consensus        71 ~~~~~-------~~d~vi~~a~~~-------------~~~~-------------------------~~~~~~~~~~~Nv~  105 (319)
                      +++++       .+|++|||||..             ....                         ..+.+...+++|..
T Consensus       139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~  218 (418)
T 4eue_A          139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG  218 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence            87764       479999999863             0000                         11112344555655


Q ss_pred             HHH-HHHHHHHhCCC----CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh--
Q 020924          106 GTL-NVVKACLEAKV----KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK--  178 (319)
Q Consensus       106 ~~~-~l~~~~~~~~~----~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--  178 (319)
                      +.. .++.++...+.    .++|++||..+..+.+.+                   ....|+.||.+.+.+.+.++.+  
T Consensus       219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~-------------------~~~aY~ASKaAL~~ltrsLA~ELa  279 (418)
T 4eue_A          219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY-------------------REGTIGIAKKDLEDKAKLINEKLN  279 (418)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT-------------------TTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc-------------------ccHHHHHHHHHHHHHHHHHHHHhC
Confidence            554 55565554332    489999997655443321                   1266999999998888877643  


Q ss_pred             --CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          179 --TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       179 --~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                        +|++++.+.||.+-++........ +.......+        .....-..+|+++++..++...
T Consensus       280 ~~~GIrVN~V~PG~v~T~~s~~ip~~-p~y~~~~~~--------~mk~~G~~E~v~e~~~~L~sd~  336 (418)
T 4eue_A          280 RVIGGRAFVSVNKALVTKASAYIPTF-PLYAAILYK--------VMKEKNIHENCIMQIERMFSEK  336 (418)
T ss_dssp             HHHSCEEEEEECCCCCCHHHHTSTTH-HHHHHHHHH--------HHHHTTCCCCHHHHHHHHHHHT
T ss_pred             CccCeEEEEEECCcCcChhhhcCCCC-cHHHHHHHH--------HHhhcCChHHHHHHHHHHhhcc
Confidence              589999999999987654322111 111111110        0111235678888888888653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.56  E-value=3e-13  Score=143.36  Aligned_cols=229  Identities=15%  Similarity=0.092  Sum_probs=146.9

Q ss_pred             CCCCeEEEeCcchH-HHHHHHHHHHHCCCeEEEEEcCCChhhHH----HHHhhhccCCCeEEEEccCCChhhHHHHhc--
Q 020924            3 LEKERVCVTGAGGF-LASWVVKLLLSRDYFVHGTAREPSDEKNA----RLYELEKASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         3 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      +++|++|||||+++ ||.++++.|++.|++|++++|+.......    ...++...+.++..+.+|++|.++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            67899999999999 99999999999999999999987752111    222222234467889999999999887742  


Q ss_pred             ---------CcceEEEeccc----CCC-----CCCCCccchh----hhhHHHHHHHHHHHHHhC----CCC---EEE-Ee
Q 020924           76 ---------GCNGVFHIACP----APS-----TTVPNPQMEL----LEPAVKGTLNVVKACLEA----KVK---RVI-VV  125 (319)
Q Consensus        76 ---------~~d~vi~~a~~----~~~-----~~~~~~~~~~----~~~Nv~~~~~l~~~~~~~----~~~---~iv-~~  125 (319)
                               .+|++|||||.    ...     ....+.++..    +++|+.++..++..+...    +..   .+| ..
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                     37999999997    111     1111223333    788999998888877642    221   222 22


Q ss_pred             ccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh--C--CceEEEEecCcccCCCCCCCCC
Q 020924          126 SSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK--T--GLDVVTICPNLVLGPLLQSKVN  201 (319)
Q Consensus       126 SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~--~~~~~~lrp~~v~G~~~~~~~~  201 (319)
                      |+.....+                       ....|+.||.+.+.+.+.++.+  .  +++++.+.||.+-+........
T Consensus      2294 ss~~g~~g-----------------------~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~ 2350 (3089)
T 3zen_D         2294 SPNRGMFG-----------------------GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQND 2350 (3089)
T ss_dssp             CSSTTSCS-----------------------SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTT
T ss_pred             CcccccCC-----------------------CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccch
Confidence            22111110                       0235999999999999988877  3  5899999999987433211111


Q ss_pred             ccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCCC---Cc--eE-EEec---c-cCCHHHHHHHHH
Q 020924          202 TSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA---EG--RY-ICTA---H-MIRARDLVDKLK  265 (319)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~--~~-~~~~---~-~~s~~e~~~~~~  265 (319)
                      ...    ......      ..+ ...++|+|.++++++.....   .+  ++ .++|   . ...+.++...+.
T Consensus      2351 ~~~----~~~~~~------~~r-~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2351 AIV----SAVEEA------GVT-TYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             TTH----HHHGGG------SCB-CEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             hHH----HHHHhc------CCC-CCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            111    111111      122 23899999999999975322   11  23 2223   2 367888877653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.54  E-value=5.9e-14  Score=148.74  Aligned_cols=167  Identities=17%  Similarity=0.171  Sum_probs=123.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      .+|+++||||+|.||+++++.|+++|++ |++++|+..+.  ....++++...+.++.++.+|++|.++++++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            3588999999999999999999999997 77888876532  122334443334568889999999999887764     


Q ss_pred             -CcceEEEecccCCCC----CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 -GCNGVFHIACPAPST----TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                       .+|+||||||.....    ...+.+...+++|+.|+.++.++++..  ..++||++||.++..+.++            
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g------------ 2030 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG------------ 2030 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT------------
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC------------
Confidence             479999999965322    223446788999999999999988764  3469999999887766542            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVL  192 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~  192 (319)
                               ...|+.+|.+.+.+++....+ |++...+..+.+-
T Consensus      2031 ---------~~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2031 ---------QANYGFANSAMERICEKRRHD-GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBC
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcC
Confidence                     456999999999999876654 8888888877653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.38  E-value=3.3e-12  Score=93.62  Aligned_cols=99  Identities=21%  Similarity=0.185  Sum_probs=77.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +.++++|+|+|+ |++|+++++.|.+.| ++|++++|++...  ..+.     ..++.++.+|+++.+.+.++++++|+|
T Consensus         2 ~~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~--~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~v   73 (118)
T 3ic5_A            2 NAMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAAL--AVLN-----RMGVATKQVDAKDEAGLAKALGGFDAV   73 (118)
T ss_dssp             CTTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHH--HHHH-----TTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             CCCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHH--HHHH-----hCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence            345689999999 999999999999999 9999999976532  2222     246788999999999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ||+++..                  ....+++++.+.+++++. +|+
T Consensus        74 i~~~~~~------------------~~~~~~~~~~~~g~~~~~-~~~  101 (118)
T 3ic5_A           74 ISAAPFF------------------LTPIIAKAAKAAGAHYFD-LTE  101 (118)
T ss_dssp             EECSCGG------------------GHHHHHHHHHHTTCEEEC-CCS
T ss_pred             EECCCch------------------hhHHHHHHHHHhCCCEEE-ecC
Confidence            9998421                  035688899999985544 444

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.37  E-value=8e-13  Score=114.60  Aligned_cols=177  Identities=18%  Similarity=0.146  Sum_probs=115.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcC----CChhhHHHHHhhhccCCCeEEEEccCCChhh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTARE----PSDEKNARLYELEKASENLKLFKADLLDYDS   69 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   69 (319)
                      |..+.+||+||||+||+|++++..|+.+|+       +|.+++++    ..... .....+......+   ..|+....+
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~-g~~~dl~~~~~~~---~~~i~~~~~   76 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQ-GVMMEIDDCAFPL---LAGMTAHAD   76 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHH-HHHHHHHTTTCTT---EEEEEEESS
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccch-hhHHHHhhhcccc---cCcEEEecC
Confidence            554567999999999999999999998885       78888776    22111 1111222110011   135555567


Q ss_pred             HHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEeccccccccCCCCCCCcccCCCC
Q 020924           70 VKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        70 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      +.++++++|+|||+||...... .+ ...++..|+.++.++++++.+++ .+ +||++|........       ...+.+
T Consensus        77 ~~~al~~aD~Vi~~ag~~~~~g-~~-r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~-------~~~~~~  147 (329)
T 1b8p_A           77 PMTAFKDADVALLVGARPRGPG-ME-RKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY-------IAMKSA  147 (329)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH-------HHHHTC
T ss_pred             cHHHhCCCCEEEEeCCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH-------HHHHHc
Confidence            8889999999999999654321 22 26788999999999999999984 65 89998873311100       000001


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCC
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPL  195 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~  195 (319)
                      +   ..|  +...+|.+++-..++...+++..|++...++...++|..
T Consensus       148 ~---~~p--~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          148 P---SLP--AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             T---TSC--GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             C---CCC--HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            0   001  123488888877777777777778877777766677854

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.21  E-value=9.1e-11  Score=101.40  Aligned_cols=117  Identities=11%  Similarity=0.094  Sum_probs=83.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++|||+||||+|++|+.++..|+++|  ++|.++++++.......+..   ......+ .+ +.+..++.++++++|+||
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~---~~~~~~v-~~-~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISH---MDTGAVV-RG-FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHT---SCSSCEE-EE-EESHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhc---ccccceE-EE-EeCCCCHHHHcCCCCEEE
Confidence            34789999999999999999999988  89999887654211111221   1111111 11 234557888899999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |+|+......  .....+...|+.++.++++++.+.+.+.+|+++|
T Consensus        82 ~~ag~~~~~g--~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           82 VPAGVPRKPG--MTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             ECCCCCCCSS--CCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EcCCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            9998654322  1225778999999999999999998777777776

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.12  E-value=1.2e-09  Score=94.53  Aligned_cols=176  Identities=11%  Similarity=-0.030  Sum_probs=112.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHH-HCCCeEEEEEcCCChhh-----------HHHHHhhhccCCCeEEEEccCCChhhHH
Q 020924            4 EKERVCVTGAGGFLASWVVKLLL-SRDYFVHGTAREPSDEK-----------NARLYELEKASENLKLFKADLLDYDSVK   71 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   71 (319)
                      ..|++|||||++.+|.+.+..|+ +.|..|+++.+......           ....+.+...+.....+.+|+++.+.++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            45899999999999999999998 67999999998654221           1112233334668899999999999988


Q ss_pred             HHhc-------CcceEEEecccCCCCC---------CCCcc---------------------chhhhhHHHHHHHH----
Q 020924           72 SAIV-------GCNGVFHIACPAPSTT---------VPNPQ---------------------MELLEPAVKGTLNV----  110 (319)
Q Consensus        72 ~~~~-------~~d~vi~~a~~~~~~~---------~~~~~---------------------~~~~~~Nv~~~~~l----  110 (319)
                      ++++       ++|++||++|......         .-+|.                     ...-+.++.++..+    
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s  208 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGE  208 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhh
Confidence            8775       5799999999652110         00110                     00112223333322    


Q ss_pred             -----HHHHHhCCC----CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC-C
Q 020924          111 -----VKACLEAKV----KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT-G  180 (319)
Q Consensus       111 -----~~~~~~~~~----~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~  180 (319)
                           ..+....++    .++|-+|+....-..|                   .-....+|.+|...|..+++++.+. +
T Consensus       209 ~~s~w~~al~~a~lla~G~siva~SYiGse~t~P-------------------~Y~~G~mG~AKaaLEa~~r~La~eL~~  269 (401)
T 4ggo_A          209 DWERWIKQLSKEGLLEEGCITLAYSYIGPEATQA-------------------LYRKGTIGKAKEHLEATAHRLNKENPS  269 (401)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHH-------------------HHTTSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHhhhcccCCceEEEEeccCcceeec-------------------CCCccHHHHHHHHHHHHHHHHHHhcCC
Confidence                 222223332    3788888743211111                   0013468999999999999998764 5


Q ss_pred             ceEEEEecCcccCCCCCC
Q 020924          181 LDVVTICPNLVLGPLLQS  198 (319)
Q Consensus       181 ~~~~~lrp~~v~G~~~~~  198 (319)
                      +++.++.++.+-+.....
T Consensus       270 ~~a~v~v~~a~vT~Assa  287 (401)
T 4ggo_A          270 IRAFVSVNKGLVTRASAV  287 (401)
T ss_dssp             EEEEEEECCCCCCTTGGG
T ss_pred             CcEEEEEcCccccchhhc
Confidence            777787887777665443

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.10  E-value=1e-10  Score=99.56  Aligned_cols=84  Identities=18%  Similarity=0.144  Sum_probs=66.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++++||||+|++|+++++.|++.|++|++++|+.++.. ...+++... .++.++.+|+++.+++.++++++|+||
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~-~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~DvlV  193 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQ-AAADSVNKR-FKVNVTAAETADDASRAEAVKGAHFVF  193 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHH-HTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHH-HHHHHHHhc-CCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence            357899999999999999999999999999999999754321 111222111 245677899999999999999999999


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      |+++..
T Consensus       194 n~ag~g  199 (287)
T 1lu9_A          194 TAGAIG  199 (287)
T ss_dssp             ECCCTT
T ss_pred             ECCCcc
Confidence            999753

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.04  E-value=8.6e-10  Score=94.84  Aligned_cols=115  Identities=17%  Similarity=0.134  Sum_probs=77.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEc--CCChhhH--HHHHhhhcc-CCCeEEEEccCCChhhHHHHhcCcc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAR--EPSDEKN--ARLYELEKA-SENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~--~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |||+||||+|++|++++..|+.+|.  ++.++++  +......  ..+...... +..+++...    .+++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCCC
Confidence            4899999999999999999998874  5777776  3221111  112211101 112222221    123566789999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +|||+||...... .. ...++..|+.++.++++++++++ +++|+++|
T Consensus        77 ~Vi~~Ag~~~~~g-~~-r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           77 VVIITSGVPRKEG-MS-RMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             EEEECCSCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             EEEECCCCCCCCC-Cc-HHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            9999999654322 22 25789999999999999999998 87777777

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.98  E-value=1.6e-09  Score=81.96  Aligned_cols=102  Identities=14%  Similarity=0.085  Sum_probs=73.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi   81 (319)
                      +++++|+|+|+ |.+|+.+++.|.+.|++|++++|++..     .+.+.  ..+...+.+|.++.+.+.++ +.++|+||
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~-----~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~d~vi   75 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK-----VNAYA--SYATHAVIANATEENELLSLGIRNFEYVI   75 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH-----HHTTT--TTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHH--HhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence            55678999998 999999999999999999999986432     11121  12456788999998888775 67899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG  128 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~  128 (319)
                      ++++..            .+.|.    .+.+.+++.+.+++|..++.
T Consensus        76 ~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           76 VAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             ECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred             ECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence            987531            12222    36667777888788776663

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.96  E-value=4.2e-09  Score=90.07  Aligned_cols=113  Identities=15%  Similarity=0.058  Sum_probs=77.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEc--CCChhhH--HHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAR--EPSDEKN--ARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |||+||||+|++|++++..|+.+|.  ++.++++  +......  ..+.........+++.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            4899999999999999999998875  6777776  3321111  11111100112333333 2  2    345789999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |||+|+...... .. ....+..|+.++.++++++++.+.+.+|+++|
T Consensus        74 Vi~~ag~~~~~g-~~-r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQPG-QT-RIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEcCCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999998654322 12 25678999999999999999998877777776

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.95  E-value=3.8e-09  Score=95.22  Aligned_cols=109  Identities=13%  Similarity=0.151  Sum_probs=77.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |++++|+|+| +|++|+++++.|++.|++|++.+|+..+  ...   +.....++..+.+|++|.+++.++++++|+|||
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~--a~~---la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn   74 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLES--AKK---LSAGVQHSTPISLDVNDDAALDAEVAKHDLVIS   74 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHH--HHH---TTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHH--HHH---HHHhcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence            4568999998 7999999999999999999999987542  222   211123477888999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhh--hH-------HHHHHHHHHHHHhCCCC
Q 020924           83 IACPAPSTTVPNPQMELLE--PA-------VKGTLNVVKACLEAKVK  120 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~--~N-------v~~~~~l~~~~~~~~~~  120 (319)
                      +++......   .....++  .|       ...+.+++++|+++|++
T Consensus        75 ~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           75 LIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             CCC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             CCccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            997543210   0001111  11       24678899999999973

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.86  E-value=5.8e-09  Score=92.93  Aligned_cols=101  Identities=18%  Similarity=0.201  Sum_probs=73.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC---CeEEEEEcCCChhhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhcC--cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD---YFVHGTAREPSDEKNARLYELEKA-SENLKLFKADLLDYDSVKSAIVG--CN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~--~d   78 (319)
                      |++|+|+|| |++|+++++.|+++|   .+|.+.+|+.++... ....+... +.++..+.+|++|.+++.+++++  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~-la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQE-IAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHH-HHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHH-HHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            468999999 999999999999988   389999998664321 11222111 13588899999999999999987  89


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEec
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS  126 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~S  126 (319)
                      +|||+++...                  ...++++|.+.++ +++-++
T Consensus        79 vVin~ag~~~------------------~~~v~~a~l~~g~-~vvD~a  107 (405)
T 4ina_A           79 IVLNIALPYQ------------------DLTIMEACLRTGV-PYLDTA  107 (405)
T ss_dssp             EEEECSCGGG------------------HHHHHHHHHHHTC-CEEESS
T ss_pred             EEEECCCccc------------------ChHHHHHHHHhCC-CEEEec
Confidence            9999986421                  1346777777776 444433

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.83  E-value=1.1e-08  Score=77.19  Aligned_cols=77  Identities=18%  Similarity=0.127  Sum_probs=58.8

Q ss_pred             CC-CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcc
Q 020924            1 MA-LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCN   78 (319)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   78 (319)
                      |+ ++|++|+|+|+ |.+|+++++.|.++|++|+++++++..  ...+..     .++.++.+|.++++.+.++ ++++|
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~--~~~~~~-----~~~~~~~gd~~~~~~l~~~~~~~~d   72 (141)
T 3llv_A            1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEK--IELLED-----EGFDAVIADPTDESFYRSLDLEGVS   72 (141)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH--HHHHHH-----TTCEEEECCTTCHHHHHHSCCTTCS
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHH--HHHHHH-----CCCcEEECCCCCHHHHHhCCcccCC
Confidence            54 34678999998 999999999999999999999987543  222221     3578899999999988876 45789


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      +||.+.+
T Consensus        73 ~vi~~~~   79 (141)
T 3llv_A           73 AVLITGS   79 (141)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9998653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.80  E-value=1.1e-08  Score=89.99  Aligned_cols=94  Identities=18%  Similarity=0.174  Sum_probs=72.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++|||+|.|| |++|+.+++.|.+ .++|.+.+|+.+.  ...+      .+.+..+..|+.|.+++.++++++|+||++
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~--~~~~------~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~   84 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNEN--LEKV------KEFATPLKVDASNFDKLVEVMKEFELVIGA   84 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHH--HHHH------TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHH--HHHH------hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence            3578999999 9999999998865 5899999887542  2222      245677889999999999999999999998


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEec
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS  126 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~S  126 (319)
                      ++...                  ...++++|.++|+ ++|=+|
T Consensus        85 ~p~~~------------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           85 LPGFL------------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             CCGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred             cCCcc------------------cchHHHHHHhcCc-ceEeee
Confidence            75421                  1348888888887 777655

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.79  E-value=4.2e-08  Score=73.71  Aligned_cols=100  Identities=11%  Similarity=0.031  Sum_probs=70.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~   82 (319)
                      .+|+|+|+|+ |++|+.+++.|.+.|++|++++|++..  ...+...    .++.++.+|.++.+.+... ++++|+||+
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~--~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~   75 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI--CKKASAE----IDALVINGDCTKIKTLEDAGIEDADMYIA   75 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH--HHHHHHh----cCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence            3578999987 999999999999999999999986542  2222211    2466788999988877655 678999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +...        +     +.|    ..+.+.+++.+.+++|..++
T Consensus        76 ~~~~--------~-----~~~----~~~~~~~~~~~~~~ii~~~~  103 (140)
T 1lss_A           76 VTGK--------E-----EVN----LMSSLLAKSYGINKTIARIS  103 (140)
T ss_dssp             CCSC--------H-----HHH----HHHHHHHHHTTCCCEEEECS
T ss_pred             eeCC--------c-----hHH----HHHHHHHHHcCCCEEEEEec
Confidence            8631        1     122    24556677777777776443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.71  E-value=5.5e-08  Score=78.74  Aligned_cols=76  Identities=16%  Similarity=0.200  Sum_probs=55.2

Q ss_pred             CCCeEEEeCc----------------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh
Q 020924            4 EKERVCVTGA----------------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY   67 (319)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   67 (319)
                      ++|+||||||                ||.+|.+++++|+++|++|+++.|+.....        ..+.++..+  |+...
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~~~~~~~--~v~s~   71 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPHPNLSIR--EITNT   71 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCCTTEEEE--ECCSH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCCCCeEEE--EHhHH
Confidence            4789999999                999999999999999999999999754211        002345554  45454


Q ss_pred             hhHH----HHhcCcceEEEecccCCC
Q 020924           68 DSVK----SAIVGCNGVFHIACPAPS   89 (319)
Q Consensus        68 ~~~~----~~~~~~d~vi~~a~~~~~   89 (319)
                      +++.    +.+.++|++||+||....
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCccccc
Confidence            4333    345579999999997544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.70  E-value=4.8e-08  Score=78.92  Aligned_cols=74  Identities=16%  Similarity=0.088  Sum_probs=56.4

Q ss_pred             CCCCeEEEeCc----------------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC
Q 020924            3 LEKERVCVTGA----------------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD   66 (319)
Q Consensus         3 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   66 (319)
                      |++|+||||||                ||.+|.+++++|+++|++|+++.++....          .+.++.  ..|+++
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~----------~~~g~~--~~dv~~   73 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------TPPFVK--RVDVMT   73 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------CCTTEE--EEECCS
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc----------cCCCCe--EEccCc
Confidence            67899999999                69999999999999999999998765311          012333  358887


Q ss_pred             hhhHHHH----hcCcceEEEecccCC
Q 020924           67 YDSVKSA----IVGCNGVFHIACPAP   88 (319)
Q Consensus        67 ~~~~~~~----~~~~d~vi~~a~~~~   88 (319)
                      .+++.+.    +..+|++||+||...
T Consensus        74 ~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcccC
Confidence            6655443    356899999999754

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.69  E-value=4.3e-08  Score=84.54  Aligned_cols=116  Identities=22%  Similarity=0.114  Sum_probs=79.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--e-----EEEEEcCCCh--hhHHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--F-----VHGTAREPSD--EKNARLYELEKA-SENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      ++|+||||+|+||++++..|+..|.  +     +.+++++...  ..... .++... .+-..    ++.......+.++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a-~DL~~~~~~~~~----~~~~~~~~~~~~~   78 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVL-MELQDCALPLLK----DVIATDKEEIAFK   78 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHH-HHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhH-hhhHhhhhcccC----CEEEcCCcHHHhC
Confidence            6899999999999999999988774  4     8888876421  11112 222221 11121    2222335667789


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC--EEEEeccc
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK--RVIVVSSG  128 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~--~iv~~SS~  128 (319)
                      ++|+||+.||...... .+. .+.++.|+...+.+++++.+++.+  +++.+|--
T Consensus        79 daDvVvitAg~prkpG-~tR-~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDG-MER-KDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             TCSEEEECCSCCCCTT-CCT-TTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             CCCEEEEeCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence            9999999998653322 222 678999999999999999998765  67777753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.66  E-value=1.6e-07  Score=71.83  Aligned_cols=78  Identities=23%  Similarity=0.265  Sum_probs=61.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi   81 (319)
                      |..++|+|+|+ |.+|+++++.|.+.|++|+++++++.. ....+....  ..++.++.+|.++.+.+.++ ++++|.||
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~-~~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED-DIKQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH-HHHHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChH-HHHHHHHhh--cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence            45678999996 999999999999999999999987432 222222211  24688999999999999887 88999999


Q ss_pred             Eec
Q 020924           82 HIA   84 (319)
Q Consensus        82 ~~a   84 (319)
                      -+.
T Consensus        77 ~~~   79 (153)
T 1id1_A           77 ALS   79 (153)
T ss_dssp             ECS
T ss_pred             Eec
Confidence            875

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.63  E-value=5.6e-07  Score=77.18  Aligned_cols=112  Identities=15%  Similarity=0.156  Sum_probs=79.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC---hhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD---YDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~d~v   80 (319)
                      |||.|+||+|++|+.++..|+..|  .+|.++++++.  .... ..+......     .++..   ..+++++++++|+|
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a-~dL~~~~~~-----~~l~~~~~t~d~~~a~~~aDvV   72 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVA-ADLSHIETR-----ATVKGYLGPEQLPDCLKGCDVV   72 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHH-HHHTTSSSS-----CEEEEEESGGGHHHHHTTCSEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHH-HHHhccCcC-----ceEEEecCCCCHHHHhCCCCEE
Confidence            489999999999999999999888  79999999872  1211 122211111     12221   24577789999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |++++...... ... .+.+..|+.....+++.+.+.+.. ++|++|-
T Consensus        73 vi~ag~~~~~g-~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           73 VIPAGVPRKPG-MTR-DDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             EECCSCCCCTT-CCG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EECCCcCCCCC-CcH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            99998654322 222 567899999999999999987643 7777654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.61  E-value=6e-08  Score=87.62  Aligned_cols=111  Identities=15%  Similarity=0.174  Sum_probs=75.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++++++|+|+|+ |++|+++++.|++. |++|++.+|+.++  ...+...    .++..+.+|+.|.+++.++++++|+|
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~k--a~~la~~----~~~~~~~~D~~d~~~l~~~l~~~DvV   92 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLAN--AQALAKP----SGSKAISLDVTDDSALDKVLADNDVV   92 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHH--HHHHHGG----GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHH--HHHHHHh----cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence            456789999998 99999999999988 7899999997653  2222211    24677789999999999999999999


Q ss_pred             EEecccCCCCCCC----CccchhhhhHH--HHHHHHHHHHHhCCC
Q 020924           81 FHIACPAPSTTVP----NPQMELLEPAV--KGTLNVVKACLEAKV  119 (319)
Q Consensus        81 i~~a~~~~~~~~~----~~~~~~~~~Nv--~~~~~l~~~~~~~~~  119 (319)
                      ||+++........    ..-..+++.+.  .....+++.|+++|+
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            9998754210000    00001122221  345677888888776

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.58  E-value=3.9e-07  Score=69.83  Aligned_cols=101  Identities=16%  Similarity=0.136  Sum_probs=71.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi   81 (319)
                      ..+++|+|+|+ |.+|+.+++.|.+.|++|++++|++...  ..   +.. ..+...+.+|.++.+.+.++ ++++|+||
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~--~~---~~~-~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAF--HR---LNS-EFSGFTVVGDAAEFETLKECGMEKADMVF   89 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGG--GG---SCT-TCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH--HH---HHh-cCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence            34679999997 9999999999999999999999876532  11   110 13466778899888777765 67899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHh-CCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~-~~~~~iv~~SS  127 (319)
                      .+.+.        +     ..    ...+++.++. .+..++|...+
T Consensus        90 ~~~~~--------~-----~~----~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           90 AFTND--------D-----ST----NFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             ECSSC--------H-----HH----HHHHHHHHHHTSCCSEEEEECS
T ss_pred             EEeCC--------c-----HH----HHHHHHHHHHHCCCCeEEEEEC
Confidence            98642        1     11    1335556666 56667776555

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.46  E-value=5.1e-07  Score=78.01  Aligned_cols=116  Identities=13%  Similarity=0.073  Sum_probs=77.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |.++||.|+|++|++|+.++..|+..|  .+|.+++++..+.....  +.... . +.     .++.-..+..++++++|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~-~~-----~~i~~t~d~~~al~dAD   78 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-F-EG-----LNLTFTSDIKEALTDAK   78 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-C-TT-----CCCEEESCHHHHHTTEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-C-CC-----CceEEcCCHHHHhCCCC
Confidence            457899999999999999999999888  58999988654322222  22211 0 10     12211235667789999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCE--EEEecc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR--VIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~--iv~~SS  127 (319)
                      +||.+||...... .. -.+.+..|+.....+.+.+.+.+.+-  ++.+|-
T Consensus        79 vVvitaG~p~kpG-~~-R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           79 YIVSSGGAPRKEG-MT-REDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEEECCC--------C-HHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEEEccCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            9999998643221 12 25778999999999999999886543  556654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.44  E-value=1e-07  Score=79.92  Aligned_cols=38  Identities=21%  Similarity=0.320  Sum_probs=31.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTARE   38 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~   38 (319)
                      |+|++++|+|+|++|.+|+.+++.+.+ .|+++.++.+.
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            888889999999999999999999874 67888755443

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.43  E-value=1.2e-06  Score=71.05  Aligned_cols=98  Identities=17%  Similarity=0.189  Sum_probs=70.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++...  ..+.+.    .+..++.+|.++.+.+.++ ++++|+||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~--~~l~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELC--EEFAKK----LKATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHH--HHHHHH----SSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH--HHHHHH----cCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            47999997 9999999999999999999999876532  222211    2568899999999999886 67899999764


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHh-CCCCEEEEecc
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLE-AKVKRVIVVSS  127 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~-~~~~~iv~~SS  127 (319)
                      +.        +     ..|    ..++..+++ .+..++|-...
T Consensus        74 ~~--------d-----~~n----~~~~~~a~~~~~~~~iia~~~  100 (218)
T 3l4b_C           74 PR--------D-----EVN----LFIAQLVMKDFGVKRVVSLVN  100 (218)
T ss_dssp             SC--------H-----HHH----HHHHHHHHHTSCCCEEEECCC
T ss_pred             CC--------c-----HHH----HHHHHHHHHHcCCCeEEEEEe
Confidence            21        1     122    235555665 57777775443

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.37  E-value=1.3e-06  Score=68.76  Aligned_cols=75  Identities=15%  Similarity=0.062  Sum_probs=59.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH--hcCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA--IVGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~~~d~   79 (319)
                      +.+++|+|+|+ |.+|+.+++.|.+. |++|++++|++..  ...+..     .++..+.+|.++.+.+.++  ++++|.
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~--~~~~~~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~  108 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEA--AQQHRS-----EGRNVISGDATDPDFWERILDTGHVKL  108 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHH--HHHHHH-----TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHH--HHHHHH-----CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence            34578999985 99999999999999 9999999987653  222222     3567788999998888877  778999


Q ss_pred             EEEecc
Q 020924           80 VFHIAC   85 (319)
Q Consensus        80 vi~~a~   85 (319)
                      ||.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998753

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.26  E-value=3.8e-06  Score=63.04  Aligned_cols=71  Identities=13%  Similarity=0.105  Sum_probs=57.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      ++|+|+|+ |.+|+.+++.|.+.|++|+++++++..  ...+..     .++.++.+|.++.+.+.++ +.++|.||-+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~--~~~~~~-----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTR--VDELRE-----RGVRAVLGNAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH--HHHHHH-----TTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHH--HHHHHH-----cCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence            57999997 999999999999999999999988653  222222     3678899999999988775 56889998865

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.26  E-value=6.2e-06  Score=70.81  Aligned_cols=117  Identities=16%  Similarity=0.151  Sum_probs=79.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhcc-CCCeEEEEccCCChhhHHHHhc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEKA-SENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      |...+++|.|+|+ |++|+.++..|+..|.  +|.+++++........  +...... +.+++....|   .    +.++
T Consensus         1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~   72 (326)
T 3pqe_A            1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCK   72 (326)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGT
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhC
Confidence            6666789999996 9999999999998886  8999998654332211  2222111 1234443322   2    3578


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ++|+||.+||...... .. -.+.+..|+.....+.+.+.+.+.+ .++.+|-
T Consensus        73 ~aDvVvi~ag~p~kpG-~~-R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           73 DADIVCICAGANQKPG-ET-RLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             TCSEEEECCSCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CCCEEEEecccCCCCC-cc-HHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            9999999998643221 12 2567899999999999999988654 5666554

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.21  E-value=7e-06  Score=70.04  Aligned_cols=84  Identities=11%  Similarity=0.045  Sum_probs=60.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCC-hhhHHHH-HhhhccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPS-DEKNARL-YELEKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      ++++++++|+|+ |.+|++++..|++.|. +|++++|+.+ ..+...+ +++... ....+...++.+.+++.+.+.++|
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l~~aD  228 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEIAESV  228 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCS
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhhcCCC
Confidence            356899999998 8999999999999998 8999999843 2222222 222111 123344457777777888888999


Q ss_pred             eEEEecccC
Q 020924           79 GVFHIACPA   87 (319)
Q Consensus        79 ~vi~~a~~~   87 (319)
                      +||++....
T Consensus       229 iIINaTp~G  237 (315)
T 3tnl_A          229 IFTNATGVG  237 (315)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECccCC
Confidence            999987643

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.18  E-value=2.6e-06  Score=67.98  Aligned_cols=74  Identities=19%  Similarity=0.116  Sum_probs=51.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH---Hhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS---AIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~--~~d   78 (319)
                      .+++|+|+||+|.||..+++.+...|++|++++|+++.  .....++     +... ..|..+.+..+.   ...  ++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~--~~~~~~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK--REMLSRL-----GVEY-VGDSRSVDFADEILELTDGYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH--HHHHHTT-----CCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHc-----CCCE-EeeCCcHHHHHHHHHHhCCCCCe
Confidence            46899999999999999999999999999999986542  2222222     2222 246665543333   232  589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      ++|+++|
T Consensus       110 ~vi~~~g  116 (198)
T 1pqw_A          110 VVLNSLA  116 (198)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999985

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.09  E-value=2.6e-05  Score=66.65  Aligned_cols=117  Identities=18%  Similarity=0.202  Sum_probs=78.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCC--ChhhHHHHHhhhcc----CCCeEEEEccCCChhhHHHH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREP--SDEKNARLYELEKA----SENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      |.|++++|.|+|+ |.+|+.++..|+..|+ +|+++++++  ........+ +...    .....+...  +|.    +.
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~d-l~~~~~~~~~~~~i~~t--~d~----~a   75 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALD-MLEASPVQGFDANIIGT--SDY----AD   75 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHH-HHHHHHHHTCCCCEEEE--SCG----GG
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhh-HHHhhhhccCCCEEEEc--CCH----HH
Confidence            6677789999997 9999999999999999 999999873  222221111 1110    011122211  122    36


Q ss_pred             hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           74 IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ++++|+||-++|...... ... .+.++.|+.....+.+.+.+.+.+ .++.+|-
T Consensus        76 ~~~aDvVIiaag~p~kpg-~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           76 TADSDVVVITAGIARKPG-MSR-DDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             GTTCSEEEECCSCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             hCCCCEEEEeCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            789999999998653322 222 678899999999999999887544 5666654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.08  E-value=1.6e-05  Score=68.15  Aligned_cols=115  Identities=13%  Similarity=0.139  Sum_probs=68.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      ..+++|.|+|+ |.+|+.++..|+..|.  ++.+++++........  +.........++....|       .+.++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence            45689999997 9999999999998886  8999998654332222  22211111233433322       23578999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      +||.+||...... .. -.+.++.|+.....+.+.+.+++.+ .++.+|-
T Consensus        79 iVvi~ag~~~kpG-~t-R~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           79 LVVITAGAPQKPG-ET-RLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             EEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             EEEECCCCCCCCC-ch-HHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence            9999998643221 12 2577899999999999999988644 5555553

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.06  E-value=9.3e-06  Score=71.33  Aligned_cols=77  Identities=10%  Similarity=0.028  Sum_probs=58.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|+|+ |.||+.+++.|...|++|++++|++..  ...+.+..  +..   +.+|..+.+++.+++.++|+||+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~--~~~~~~~~--g~~---~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKR--LQYLDDVF--GGR---VITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHT--TTS---EEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH--HHHHHHhc--Cce---EEEecCCHHHHHHHHhCCCEEEE
Confidence            45789999999 999999999999999999999987643  22222211  112   34577788889899999999999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +++..
T Consensus       236 ~~g~~  240 (369)
T 2eez_A          236 AVLVP  240 (369)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            98754

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.06  E-value=7.3e-06  Score=67.21  Aligned_cols=70  Identities=13%  Similarity=0.080  Sum_probs=56.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~   83 (319)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++++++...  ..+.      .++.++.+|.++.+.+..+ ++++|.||.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~--~~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK--KVLR------SGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH--HHHH------TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH--HHHh------cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            368999998 9999999999999999 99998876532  1211      3578999999999999877 7899999986


Q ss_pred             c
Q 020924           84 A   84 (319)
Q Consensus        84 a   84 (319)
                      .
T Consensus        79 ~   79 (234)
T 2aef_A           79 L   79 (234)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.02  E-value=5.9e-06  Score=71.65  Aligned_cols=101  Identities=16%  Similarity=0.198  Sum_probs=60.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC------CeEEEEEcCCChhhHHHHHhhhccCCCeEE-EEccCCChhhHHHHhc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD------YFVHGTAREPSDEKNARLYELEKASENLKL-FKADLLDYDSVKSAIV   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~   75 (319)
                      |+|++|+|.||||.+|+.+++.|++++      .+++.+.+..+..+.  +..   .++++.- ...++.+.+  .+.+.
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~--~~~---~~~~l~~~~~~~~~~~~--~~~~~   79 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGST--LGE---HHPHLTPLAHRVVEPTE--AAVLG   79 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSB--GGG---TCTTCGGGTTCBCEECC--HHHHT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCc--hhh---hcccccccceeeeccCC--HHHhc
Confidence            455799999999999999999999877      377777654322110  110   0111100 001111111  12355


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccc
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVA  130 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~  130 (319)
                      ++|+||.+++...                  +..++..+ +.|+ ++|-+|+...
T Consensus        80 ~~DvVf~alg~~~------------------s~~~~~~~-~~G~-~vIDlSa~~R  114 (352)
T 2nqt_A           80 GHDAVFLALPHGH------------------SAVLAQQL-SPET-LIIDCGADFR  114 (352)
T ss_dssp             TCSEEEECCTTSC------------------CHHHHHHS-CTTS-EEEECSSTTT
T ss_pred             CCCEEEECCCCcc------------------hHHHHHHH-hCCC-EEEEECCCcc
Confidence            8999999876432                  23466677 6786 8999998653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.02  E-value=1.7e-05  Score=69.10  Aligned_cols=74  Identities=22%  Similarity=0.327  Sum_probs=53.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d   78 (319)
                      .+++|||+||+|.||..+++.+...|++|++++|++...  ....++     +... ..|+++.+++.+.+.     ++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~--~~~~~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE--ELFRSI-----GGEV-FIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH--HHHHHT-----TCCE-EEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH--HHHHHc-----CCce-EEecCccHhHHHHHHHHhCCCCC
Confidence            468999999999999999999999999999999877642  233332     2222 237765444444332     589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      +||++++
T Consensus       241 ~vi~~~g  247 (347)
T 2hcy_A          241 GVINVSV  247 (347)
T ss_dssp             EEEECSS
T ss_pred             EEEECCC
Confidence            9999986

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.00  E-value=4.4e-05  Score=65.87  Aligned_cols=111  Identities=16%  Similarity=0.107  Sum_probs=73.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhH--HHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKN--ARLYELEK---ASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      ++|+|.|+|| |.+|..++..|+..|+ +|.+.+++++....  ..+.....   ...+++.       ..+++++++++
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~a   79 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTGA   79 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCCC
Confidence            3468999998 9999999999999998 99999998764432  11111100   0112221       12355578899


Q ss_pred             ceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhCCCCEEE
Q 020924           78 NGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEAKVKRVI  123 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv  123 (319)
                      |+||-.++.......+    .. ......|+.....+.+.+.+...+-++
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~v  128 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSR-NDLLPFNSKIIREIGQNIKKYCPKTFI  128 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCG-GGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CEEEEccCCCCCCCcccCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCcEE
Confidence            9999998754322110    22 456778899999999999887544333

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.96  E-value=1.4e-05  Score=69.11  Aligned_cols=74  Identities=22%  Similarity=0.205  Sum_probs=52.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh-----cCcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI-----VGCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d   78 (319)
                      .+++|||+||+|.||..+++.+...|++|++++|+.+.  ....+++     +.. ...|.++.+++.+.+     .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~--~~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK--IAYLKQI-----GFD-AAFNYKTVNSLEEALKKASPDGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHT-----TCS-EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhc-----CCc-EEEecCCHHHHHHHHHHHhCCCCe
Confidence            36899999999999999999999999999999986542  2223332     122 224776633343333     2589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      ++|+++|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.94  E-value=9e-05  Score=63.49  Aligned_cols=116  Identities=17%  Similarity=0.158  Sum_probs=76.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHH--HHhhhc-cCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNAR--LYELEK-ASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |++++|.|+|+ |.+|..++..|+..|+ +|.++++++.......  +..... .....++...  .|.    ++++++|
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~----~a~~~aD   77 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY----AAIEGAD   77 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG----GGGTTCS
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH----HHHCCCC
Confidence            56789999998 9999999999999998 9999999877542222  221110 0112222211  122    4678999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      +||.++|....... .. .+.+..|+.....+.+.+.+.+.. .++.+|-
T Consensus        78 iVIiaag~p~k~G~-~R-~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           78 VVIVTAGVPRKPGM-SR-DDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             EEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEccCcCCCCCC-CH-HHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            99999885433221 22 567889999999999999888644 5666654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.93  E-value=9.6e-06  Score=65.36  Aligned_cols=73  Identities=14%  Similarity=0.008  Sum_probs=49.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |+|+|+||+|++|+++++.|++.|++|++.+|+++..  ..+.+....  .+.  ..|+. ..++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~--~~~--~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA--EAKAAEYRR--IAG--DASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH--HHHHHHHHH--HHS--SCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhcc--ccc--cCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            4799999999999999999999999999999875432  111110000  000  01222 2356667788999999863

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.93  E-value=5.8e-05  Score=64.74  Aligned_cols=114  Identities=15%  Similarity=0.210  Sum_probs=70.3

Q ss_pred             CCC--CCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhcc---CCCeEEEEccCCChhhHHHH
Q 020924            1 MAL--EKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKA---SENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         1 m~~--~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      |.|  +++||.|+|+ |.+|..++-.|+..|.  +|.+++++........ ..+...   ...+++..   .+    .++
T Consensus         1 ~~m~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~-~dl~~~~~~~~~~~i~~---~~----~~a   71 (318)
T 1y6j_A            1 MEMVKSRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEA-MDINHGLPFMGQMSLYA---GD----YSD   71 (318)
T ss_dssp             ------CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHH-HHHTTSCCCTTCEEEC-----C----GGG
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHH-HHHHHhHHhcCCeEEEE---CC----HHH
Confidence            444  4578999998 9999999999999887  8999998765432212 122111   11222221   22    335


Q ss_pred             hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEe
Q 020924           74 IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVV  125 (319)
Q Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~  125 (319)
                      ++++|+||.+++...... .. ..+....|+.....+.+.+.+.+.+ .+|.+
T Consensus        72 ~~~aDvVii~~g~p~k~g-~~-r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKPG-ET-RLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             GTTCSEEEECCCC-------C-HHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             hCCCCEEEEcCCCCCCCC-cC-HHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            889999999998643211 12 2467789999999999999987544 44443

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.88  E-value=0.00013  Score=62.44  Aligned_cols=116  Identities=16%  Similarity=0.132  Sum_probs=78.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHH--HHhhhc-cCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNAR--LYELEK-ASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |++++|.|+|+ |.+|+.++..|+..|. +|.++++++.......  +..... .+...++...  .|.    ++++++|
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~aD   75 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLENSD   75 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHCCCC
Confidence            56689999996 9999999999999887 9999999876532222  221110 0112222211  122    4678999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      +||..++...... .. ..+.+..|+.....+.+.+.+.+.+ .++.+|-
T Consensus        76 vVIi~ag~p~k~G-~~-R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           76 VVIVTAGVPRKPG-MS-RDDLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             EEEECCSCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEcCCcCCCCC-CC-HHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            9999988643322 12 2567889999999999999988654 5666653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.88  E-value=0.00014  Score=62.09  Aligned_cols=112  Identities=11%  Similarity=0.151  Sum_probs=71.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhcc----CCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKA----SENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++|.|+|| |.+|+.++..|+..|+ +|.++++++....... ..+...    ....++...  +|   . +.++++|+|
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~-~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~V   74 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKA-LDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVI   74 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHH-HHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHH-HhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEE
Confidence            68999999 9999999999999996 9888888765432221 122110    111222210  12   2 357899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |.+++....... . .......|+.....+.+.+.+.+.+.+|.+.|
T Consensus        75 i~a~g~p~~~g~-~-r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           75 VVTSGAPRKPGM-S-REDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEcCCCCCCCCC-C-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            999986433211 1 14567889999999999998886655554444

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.86  E-value=0.0001  Score=62.69  Aligned_cols=83  Identities=13%  Similarity=0.077  Sum_probs=56.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh-hhHHHHH-hhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD-EKNARLY-ELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +++++++|+|+ |..|++++..|.+.|. +|++.+|+.+. .+...+. ++... .+......++.+.+.+.+.+.++|+
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhccCceE
Confidence            56789999998 8999999999999998 89999998442 1222221 12111 1233334455555445667778999


Q ss_pred             EEEecccC
Q 020924           80 VFHIACPA   87 (319)
Q Consensus        80 vi~~a~~~   87 (319)
                      |||+....
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99987654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.85  E-value=2.5e-05  Score=65.48  Aligned_cols=77  Identities=18%  Similarity=0.138  Sum_probs=51.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++++|+|+ |.+|++++..|++.|++|++.+|+.++... ..+.+... ..+.  ..|+   +++.+  .++|+||
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~-la~~~~~~-~~~~--~~~~---~~~~~--~~~DivV  185 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEE-LAKLFAHT-GSIQ--ALSM---DELEG--HEFDLII  185 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHH-HHHHTGGG-SSEE--ECCS---GGGTT--CCCSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHH-HHHHhhcc-CCee--EecH---HHhcc--CCCCEEE
Confidence            356789999998 789999999999999999999988653211 11222111 1221  2333   23222  5799999


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      ++++...
T Consensus       186 n~t~~~~  192 (271)
T 1nyt_A          186 NATSSGI  192 (271)
T ss_dssp             ECCSCGG
T ss_pred             ECCCCCC
Confidence            9998543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.84  E-value=4.5e-05  Score=67.78  Aligned_cols=72  Identities=22%  Similarity=0.245  Sum_probs=59.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~   83 (319)
                      +++|+|+|. |-+|+.+++.|.+.|++|+++++++...  ..+..     .++.++.+|.++.+.+..+ ++++|+||-+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v--~~~~~-----~g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHI--ETLRK-----FGMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHH--HHHHH-----TTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH--HHHHh-----CCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            467999997 9999999999999999999999886632  22222     3578899999999999887 7789999886


Q ss_pred             c
Q 020924           84 A   84 (319)
Q Consensus        84 a   84 (319)
                      .
T Consensus        76 ~   76 (413)
T 3l9w_A           76 I   76 (413)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.83  E-value=2.6e-05  Score=67.33  Aligned_cols=74  Identities=11%  Similarity=0.001  Sum_probs=51.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH---Hhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS---AIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~--~~d   78 (319)
                      .+++|||+||+|.||..+++.+...|++|++++|++..  ...+.++     +... ..|.++.+..+.   ...  ++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~--~~~~~~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK--AQSALKA-----GAWQ-VINYREEDLVERLKEITGGKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH--HHHHHHH-----TCSE-EEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHc-----CCCE-EEECCCccHHHHHHHHhCCCCce
Confidence            36899999999999999999999999999999987542  2233332     1111 236655443333   322  589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      ++|+++|
T Consensus       212 ~vi~~~g  218 (327)
T 1qor_A          212 VVYDSVG  218 (327)
T ss_dssp             EEEECSC
T ss_pred             EEEECCc
Confidence            9999987

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.82  E-value=0.00016  Score=61.54  Aligned_cols=115  Identities=17%  Similarity=0.124  Sum_probs=76.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-C--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-D--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |||.|+||+|.+|+.++..|..+ +  .++.++++++ ...... .++.+.....+.... .+  ....+.++++|+||-
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a-~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii   75 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVA-VDLSHIPTAVKIKGF-SG--EDATPALEGADVVLI   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHH-HHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHH-HHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEE
Confidence            58999999999999999998765 4  5889888876 222222 222222222222211 01  123457789999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      .||...... ... .+.++.|......+.+.+.+++.+ .++.+|-
T Consensus        76 ~ag~~rkpG-~~R-~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           76 SAGVARKPG-MDR-SDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             CCSCSCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             eCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            998653322 222 678999999999999999887543 5666654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.80  E-value=3.9e-05  Score=66.91  Aligned_cols=74  Identities=15%  Similarity=0.129  Sum_probs=51.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh---HHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS---VKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d   78 (319)
                      .+++|+|+||+|.+|..+++.+...|++|++++|++..  .....++     +... ..|..+.+.   +.+...  ++|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~-----ga~~-~~d~~~~~~~~~~~~~~~~~~~D  241 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG--QKIVLQN-----GAHE-VFNHREVNYIDKIKKYVGEKGID  241 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHT-----TCSE-EEETTSTTHHHHHHHHHCTTCEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHc-----CCCE-EEeCCCchHHHHHHHHcCCCCcE
Confidence            36799999999999999999999999999999987543  2233332     1221 235555433   333333  589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      +||+++|
T Consensus       242 ~vi~~~G  248 (351)
T 1yb5_A          242 IIIEMLA  248 (351)
T ss_dssp             EEEESCH
T ss_pred             EEEECCC
Confidence            9999987

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.80  E-value=0.0003  Score=60.65  Aligned_cols=117  Identities=21%  Similarity=0.164  Sum_probs=76.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCChhh--HHHHHhhhccC-CC-eEEEEccCCChhhHH
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSDEK--NARLYELEKAS-EN-LKLFKADLLDYDSVK   71 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~--~~~~~~~~~~~-~~-~~~~~~Dl~~~~~~~   71 (319)
                      |...||.|+||+|.||+.++-.|+....       ++..++.++....  ...+ ++.... +. ...+..     .+..
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~-DL~~~~~~~~~~~~~~-----~~~~   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEA-ELEDCAFPLLDKVVVT-----ADPR   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTTCTTEEEEEEE-----SCHH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhh-hhhhcCccCCCcEEEc-----CChH
Confidence            4456999999999999999998876532       6788776543221  1111 122211 11 122222     1346


Q ss_pred             HHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEecc
Q 020924           72 SAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSS  127 (319)
Q Consensus        72 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS  127 (319)
                      ++++++|+||-.||....+. ... .+.++.|....+.+.+.+.+.. .. +++.+|-
T Consensus        96 ~a~~~advVvi~aG~prkpG-mtR-~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPRKAG-MER-KDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             HHTTTCSEEEECCCCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             HHhCCCCEEEECCCCCCCCC-CCH-HHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            67899999999998654332 233 6789999999999999998863 22 5666664

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.79  E-value=3e-05  Score=67.09  Aligned_cols=75  Identities=16%  Similarity=0.108  Sum_probs=52.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh---HHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS---VKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d   78 (319)
                      .+++|+|+||+|.||..+++.+...|++|++++|+...  ...+.++     +... ..|.++.+.   +.+...  ++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~~-----g~~~-~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK--AETARKL-----GCHH-TINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHH-----TCSE-EEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc-----CCCE-EEECCCHHHHHHHHHHhCCCCCe
Confidence            36799999999999999999999999999999987542  2233332     1121 236655433   333332  589


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|+++|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999874

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.78  E-value=0.00041  Score=59.50  Aligned_cols=115  Identities=14%  Similarity=0.136  Sum_probs=77.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      .+++|.|+|+ |.+|+.++..|+.+|.  +|.+++++........  +............+..  .|.+    .++++|+
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~~~aDi   90 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VTANSKL   90 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GGTTEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----HhCCCCE
Confidence            4579999998 9999999999999886  8999988754332222  2222111112222222  1332    4789999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ||.+||...... ... .+.++.|+.....+.+.+.+++.. .++.+|-
T Consensus        91 Vvi~aG~~~kpG-~tR-~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           91 VIITAGARQQEG-ESR-LNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             EEECCSCCCCTT-CCG-GGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEccCCCCCCC-ccH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999998654322 223 688999999999999999988543 6666654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.77  E-value=0.00021  Score=61.19  Aligned_cols=114  Identities=13%  Similarity=0.128  Sum_probs=74.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhH--HHHHhhhcc-CCCeEEEEccCCChhhHHHHhcCc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKN--ARLYELEKA-SENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |++++|.|+|+ |.+|..++..|+.+|  .+|.++++++.....  ..+...... +..+++.. |  +    .++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCC
Confidence            55679999999 999999999999877  489988876532221  111111111 12333332 2  2    3457899


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      |+||..++...... .. .......|+.....+.+.+.+.+.. .+|.+|
T Consensus        76 DvVvi~ag~~~~~g-~~-r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           76 DLVVICAGAAQKPG-ET-RLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             SEEEECCCCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCC-Cc-HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999998643321 12 2467789999999999999888544 455543

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.76  E-value=4.3e-05  Score=66.72  Aligned_cols=75  Identities=11%  Similarity=-0.060  Sum_probs=52.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh---HHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS---VKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d   78 (319)
                      .+++|||+||+|.||..+++.+...|++|++++|++++  ...++++     +... ..|..+.+.   +.+...  ++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~~d  233 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK--LQMAEKL-----GAAA-GFNYKKEDFSEATLKFTKGAGVN  233 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHH-----TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHc-----CCcE-EEecCChHHHHHHHHHhcCCCce
Confidence            36799999999999999999999999999999987542  2233332     1121 235555433   333332  589


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|+++|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999974

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.76  E-value=5.2e-05  Score=63.77  Aligned_cols=81  Identities=15%  Similarity=0.152  Sum_probs=54.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++++++++|+|+ |.+|++++..|.+.|. +|++++|+.++... ..+.+....+.+.+...++   +++.+.+.++|+|
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~-la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiV  198 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQA-LADVINNAVGREAVVGVDA---RGIEDVIAAADGV  198 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHH-HHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-HHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEE
Confidence            356889999998 8999999999999998 79999998664321 1122211111223333333   4566777889999


Q ss_pred             EEecccC
Q 020924           81 FHIACPA   87 (319)
Q Consensus        81 i~~a~~~   87 (319)
                      |++....
T Consensus       199 InaTp~G  205 (283)
T 3jyo_A          199 VNATPMG  205 (283)
T ss_dssp             EECSSTT
T ss_pred             EECCCCC
Confidence            9987543

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.76  E-value=3.2e-05  Score=67.25  Aligned_cols=74  Identities=22%  Similarity=0.224  Sum_probs=50.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHH-hhhccCCCeEEEEccCCChhhHHHHh-----cCc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLY-ELEKASENLKLFKADLLDYDSVKSAI-----VGC   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~   77 (319)
                      .+++|||+||+|.+|..+++.+...|++|++++|++.  +...+. ++     +... ..|..+.+++.+.+     .++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~--~~~~~~~~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE--KVDLLKTKF-----GFDD-AFNYKEESDLTAALKRCFPNGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHTS-----CCSE-EEETTSCSCSHHHHHHHCTTCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHc-----CCce-EEecCCHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999998754  222222 22     1222 23655432232222     258


Q ss_pred             ceEEEecc
Q 020924           78 NGVFHIAC   85 (319)
Q Consensus        78 d~vi~~a~   85 (319)
                      |++|+++|
T Consensus       227 d~vi~~~g  234 (345)
T 2j3h_A          227 DIYFENVG  234 (345)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999986

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.73  E-value=9.4e-05  Score=62.63  Aligned_cols=37  Identities=30%  Similarity=0.235  Sum_probs=32.2

Q ss_pred             CCCe-EEEe-Ccc-----------------hHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKER-VCVT-GAG-----------------GFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~-vlIt-Gat-----------------G~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .+++ |||| |+|                 |-.|.+++++++++|++|+.+.+...
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            4667 9999 667                 99999999999999999999998644

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.73  E-value=5.6e-05  Score=63.90  Aligned_cols=113  Identities=15%  Similarity=0.077  Sum_probs=76.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhc-cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEK-ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+|.|+|+ |.+|..++..|+..|+  +|.+.+++++......  +..... .+...++...  +|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            47999999 9999999999999887  9999998765432112  222111 1122222221  12    3467899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |.++|...... .. -.+.+..|+.....+.+.+.+.+.+ .++.+|-
T Consensus        74 Viaag~~~kpG-~~-R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           74 VVTAGLARKPG-MT-RLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSS-CC-HHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EECCCCCCCCC-Cc-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            99988643221 12 2567899999999999999988543 5666654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.69  E-value=6.3e-05  Score=65.72  Aligned_cols=72  Identities=15%  Similarity=0.111  Sum_probs=49.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHh-hhccCCCeEEEEccCCChhh---HHHHhc-Ccce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYE-LEKASENLKLFKADLLDYDS---VKSAIV-GCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~---~~~~~~-~~d~   79 (319)
                      ++|||+||+|.||..+++.+...|+ +|++++++...  ...+.+ +     +... ..|..+.+.   +.+... ++|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~--~~~~~~~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK--CILLTSEL-----GFDA-AINYKKDNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHH--HHHHHHTS-----CCSE-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHH--HHHHHHHc-----CCce-EEecCchHHHHHHHHhcCCCCCE
Confidence            7999999999999999999999999 99999987542  222222 2     1221 246655332   222222 5899


Q ss_pred             EEEecc
Q 020924           80 VFHIAC   85 (319)
Q Consensus        80 vi~~a~   85 (319)
                      +|+++|
T Consensus       234 vi~~~G  239 (357)
T 2zb4_A          234 YFDNVG  239 (357)
T ss_dssp             EEESCC
T ss_pred             EEECCC
Confidence            999987

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.68  E-value=6.5e-05  Score=67.85  Aligned_cols=72  Identities=11%  Similarity=0.163  Sum_probs=57.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~   83 (319)
                      .|+|+|.|+ |-+|+++++.|.++||+|++++++++.  ...+.+.    ..+..+.+|-++++.++++ ++++|.+|-+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~--~~~~~~~----~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDR--LRELQDK----YDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHH--HHHHHHH----SSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH--HHHHHHh----cCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            478999998 999999999999999999999987653  2232221    2578899999999999987 5679988754

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.68  E-value=0.0001  Score=62.54  Aligned_cols=78  Identities=18%  Similarity=0.162  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++.+++|+|+|+ |.+|+.++..|++.|. +|++.+|+.++.  ..+.+...  ....    ++.+.+++.+.+.++|+|
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka--~~la~~~~--~~~~----~~~~~~~~~~~~~~aDiv  208 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKA--ERLVREGD--ERRS----AYFSLAEAETRLAEYDII  208 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHH--HHHHHHSC--SSSC----CEECHHHHHHTGGGCSEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHH--HHHHHHhh--hccC----ceeeHHHHHhhhccCCEE
Confidence            356789999998 7899999999999997 999999986532  22221111  1000    122335677778899999


Q ss_pred             EEecccCC
Q 020924           81 FHIACPAP   88 (319)
Q Consensus        81 i~~a~~~~   88 (319)
                      |++.+...
T Consensus       209 In~t~~~~  216 (297)
T 2egg_A          209 INTTSVGM  216 (297)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99987654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.67  E-value=6.6e-05  Score=65.01  Aligned_cols=74  Identities=23%  Similarity=0.186  Sum_probs=50.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHH-HhhhccCCCeEEEEccCCChhhHHHHh----cCcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARL-YELEKASENLKLFKADLLDYDSVKSAI----VGCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~----~~~d   78 (319)
                      .+++|||+||+|.||..+++.+...|++|++++|+++  +...+ +++     +... ..|..+.+..+.+.    .++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~~~~~~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAE--KCRFLVEEL-----GFDG-AIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHTT-----CCSE-EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHc-----CCCE-EEECCCHHHHHHHHHhcCCCce
Confidence            4689999999999999999999999999999998754  22333 332     2221 23555433322222    2589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      ++|+++|
T Consensus       221 ~vi~~~g  227 (336)
T 4b7c_A          221 VFFDNVG  227 (336)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999986

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.66  E-value=0.00041  Score=59.16  Aligned_cols=113  Identities=17%  Similarity=0.113  Sum_probs=74.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhc-cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEK-ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+|.|+|+ |.+|+.++..|+..|.  +|.++++++.......  +..... .....++...|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            57999997 9999999999998886  8999999876543222  221110 11223333222  2    2467899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |-+||...... ... .+.++.|+.....+.+.+.+.+.+ .++.+|-
T Consensus        74 ii~ag~~~kpG-~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           74 IITAGLPRSPG-MSR-DDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EECCCC--------C-HHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EECCCCCCCCC-CCH-HHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            99988653322 122 678899999999999999988643 5666554

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.63  E-value=7.5e-05  Score=62.26  Aligned_cols=75  Identities=12%  Similarity=0.209  Sum_probs=45.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEE-EcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR-DYFVHGT-AREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+|++|.|+|++|.+|+.+++.+.+. ++++.++ +|+.+........++.    ++..   ++.-.+++++++.++|+|
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~----g~~~---gv~v~~dl~~ll~~~DVV   77 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL----GKQT---GVALTDDIERVCAEADYL   77 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT----TCCC---SCBCBCCHHHHHHHCSEE
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh----CCCC---CceecCCHHHHhcCCCEE
Confidence            55689999999999999999999864 6787774 5543311000000110    0000   222234566667789999


Q ss_pred             EEec
Q 020924           81 FHIA   84 (319)
Q Consensus        81 i~~a   84 (319)
                      |+++
T Consensus        78 IDfT   81 (272)
T 4f3y_A           78 IDFT   81 (272)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            9985

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.63  E-value=1.1e-05  Score=68.22  Aligned_cols=81  Identities=11%  Similarity=0.055  Sum_probs=51.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC-CCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS-ENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++++++++|||++ .+|++++..|++.| +|++.+|+.++... ..+.+.... ... .+.+|+.+.   .+.+.++|+|
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~-l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~Dil  197 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEA-LAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDII  197 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHH-HHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHH-HHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEE
Confidence            4567899999985 99999999999999 99999987543211 111111100 000 011233331   3345678999


Q ss_pred             EEecccCCC
Q 020924           81 FHIACPAPS   89 (319)
Q Consensus        81 i~~a~~~~~   89 (319)
                      |++++....
T Consensus       198 Vn~ag~~~~  206 (287)
T 1nvt_A          198 INATPIGMY  206 (287)
T ss_dssp             EECSCTTCT
T ss_pred             EECCCCCCC
Confidence            999986543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.62  E-value=3.6e-05  Score=57.89  Aligned_cols=71  Identities=14%  Similarity=0.178  Sum_probs=50.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++.+|++..... ..+++     +....     ..+++.+++.++|+||.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~-~a~~~-----~~~~~-----~~~~~~~~~~~~Divi~at   88 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRA-FAEKY-----EYEYV-----LINDIDSLIKNNDVIITAT   88 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHH-HHHHH-----TCEEE-----ECSCHHHHHHTCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHH-HHHHh-----CCceE-----eecCHHHHhcCCCEEEEeC
Confidence            579999996 999999999999999999999987653211 11221     12221     2234666778999999987


Q ss_pred             ccC
Q 020924           85 CPA   87 (319)
Q Consensus        85 ~~~   87 (319)
                      +..
T Consensus        89 ~~~   91 (144)
T 3oj0_A           89 SSK   91 (144)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            643

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.62  E-value=7.7e-05  Score=64.50  Aligned_cols=97  Identities=24%  Similarity=0.205  Sum_probs=56.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC---eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY---FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |+| +++|+|.||||.+|+.+++.|.++++   ++.++...........   +    .+......|+ +.+    .++++
T Consensus         3 M~m-~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~---~----~g~~i~~~~~-~~~----~~~~~   69 (340)
T 2hjs_A            3 MSQ-PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG---F----AESSLRVGDV-DSF----DFSSV   69 (340)
T ss_dssp             --C-CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE---E----TTEEEECEEG-GGC----CGGGC
T ss_pred             CCC-CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc---c----CCcceEEecC-CHH----HhcCC
Confidence            544 36899999999999999999986654   4555542211110000   0    1111111122 122    24689


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      |+||.+.+..                  .+..++..+.+.|+ ++|-+|+..
T Consensus        70 DvV~~a~g~~------------------~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           70 GLAFFAAAAE------------------VSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             SEEEECSCHH------------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             CEEEEcCCcH------------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence            9999987531                  13457777778888 578888754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.59  E-value=0.00011  Score=64.07  Aligned_cols=75  Identities=17%  Similarity=0.127  Sum_probs=51.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh---HHHHh-cCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS---VKSAI-VGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~-~~~d~   79 (319)
                      .+++|||+||+|.+|..+++.+...|++|++++|++++  ...++++     +... ..|..+.+.   +.+.. .++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~l-----Ga~~-~~~~~~~~~~~~~~~~~~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGK--CEACERL-----GAKR-GINYRSEDFAAVIKAETGQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHH-----TCSE-EEETTTSCHHHHHHHHHSSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHhc-----CCCE-EEeCCchHHHHHHHHHhCCCceE
Confidence            36799999999999999999999999999999987653  3333333     1111 134444322   22222 26899


Q ss_pred             EEEeccc
Q 020924           80 VFHIACP   86 (319)
Q Consensus        80 vi~~a~~   86 (319)
                      +|+++|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999873

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.57  E-value=0.00063  Score=57.30  Aligned_cols=113  Identities=14%  Similarity=0.084  Sum_probs=75.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHH--Hhhhc-cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARL--YELEK-ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |||.|+|+ |+||+.++-.|+.++  -++.+++.+........+  ..... .+...+....+  |.+    .++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~----~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS----LLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH----HhCCCCEE
Confidence            58999996 999999999998776  478888876543333232  22111 11222333221  232    47799999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCE-EEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR-VIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~-iv~~SS  127 (319)
                      |-.||....+. ... .+.++.|....+.+.+.+.+++.+- ++.+|-
T Consensus        74 vitAG~prkpG-mtR-~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           74 VVTAGLARKPG-MTR-LDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSS-SCH-HHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEecCCCCCCC-Cch-HHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            99999654332 233 6889999999999999999986554 444443

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.57  E-value=0.00067  Score=58.06  Aligned_cols=115  Identities=15%  Similarity=0.203  Sum_probs=74.8

Q ss_pred             CCC-CCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhcc----CCCeEEEEccCCChhhHHHH
Q 020924            1 MAL-EKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKA----SENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      |+. ++++|.|+|+ |.+|..++..|+..|.  +|.++++++....... ..+...    ...+++.. |  +    .+.
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~-~dl~~~~~~~~~~~~i~~-~--~----~~a   71 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDA-MDFNHGKVFAPKPVDIWH-G--D----YDD   71 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-HHHHHHTTSSSSCCEEEE-C--C----GGG
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHH-hhHHHHhhhcCCCeEEEc-C--c----HHH
Confidence            553 4479999999 9999999999987774  8999998754222211 112111    11333332 1  2    235


Q ss_pred             hcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           74 IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      ++++|+||-+++....... .. ...+..|......+.+.+.+.... .++.+|
T Consensus        72 l~~aDvViia~~~~~~~g~-~r-~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGE-TR-LDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTT-CS-GGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             hCCCCEEEEcCCCCCCCCC-CH-HHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            7899999999986544322 22 566788988899999998887543 445443

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.57  E-value=0.0001  Score=63.96  Aligned_cols=74  Identities=18%  Similarity=0.091  Sum_probs=51.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   78 (319)
                      .+++|||+||+|.+|..+++.+...|++|++++|++.+  ...+.++     +... ..|..+.+   .+.+...  ++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~~-----ga~~-~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDK--LRRAKAL-----GADE-TVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHH-----TCSE-EEETTSTTHHHHHHHHTTTTCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhc-----CCCE-EEcCCcccHHHHHHHHhCCCCce
Confidence            36799999999999999999999999999999987543  2333332     1222 23665543   3333332  589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      +||+++|
T Consensus       238 ~vi~~~g  244 (343)
T 2eih_A          238 KVVDHTG  244 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999997

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.56  E-value=0.00014  Score=63.07  Aligned_cols=98  Identities=11%  Similarity=0.076  Sum_probs=59.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEE-EEccCCChhhHHHHhcCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKL-FKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +|++|.|.||||.+|+.+++.|.++. .+++++.+..+...  .+...   ++.+.- ....+.+.+   + +.++|+||
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~--~~~~~---~~~~~g~~~~~~~~~~---~-~~~vDvV~   73 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGE--PVHFV---HPNLRGRTNLKFVPPE---K-LEPADILV   73 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTS--BGGGT---CGGGTTTCCCBCBCGG---G-CCCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCc--hhHHh---CchhcCcccccccchh---H-hcCCCEEE
Confidence            35799999999999999999998765 48877776433211  11111   111000 001122322   2 47899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      .+++...                  +..++..+.+.|+ ++|-+|+..
T Consensus        74 ~a~g~~~------------------s~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           74 LALPHGV------------------FAREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             ECCCTTH------------------HHHTHHHHHTTCS-EEEECSSTT
T ss_pred             EcCCcHH------------------HHHHHHHHHHCCC-EEEEcCccc
Confidence            9875321                  3346666677787 688888854

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.56  E-value=0.00014  Score=63.04  Aligned_cols=69  Identities=12%  Similarity=0.091  Sum_probs=57.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      ++++|+|+ |.+|+.+++.|.++|+ |++++++++..  . +.+     .++.++.+|.+|++.++++ ++++|.|+-+.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~--~-~~~-----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK--K-VLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH--H-HHH-----TTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh--h-HHh-----CCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            47999997 9999999999999999 99998776532  2 222     4688999999999999987 77899988764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.56  E-value=0.00025  Score=61.46  Aligned_cols=76  Identities=14%  Similarity=0.089  Sum_probs=51.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC-hhhHHHHhc--CcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD-YDSVKSAIV--GCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~v   80 (319)
                      .+++|||+||+|.+|..+++.+...|++|++++++.++  .....++.   . -.++..+ .+ .+.+.+...  ++|++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~g---a-~~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAA--TEFVKSVG---A-DIVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHT---C-SEEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHhcC---C-cEEecCc-hhHHHHHHHHhCCCCceEE
Confidence            36899999999999999999999999999999987653  33333331   1 1223233 22 123333333  58999


Q ss_pred             EEeccc
Q 020924           81 FHIACP   86 (319)
Q Consensus        81 i~~a~~   86 (319)
                      |+++|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999874

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.55  E-value=0.00061  Score=58.32  Aligned_cols=112  Identities=13%  Similarity=0.133  Sum_probs=71.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +||.|+|| |.+|+.++-.|+..+.  ++.+++++........  +.........+++.. |  +    .++++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999999 9999999999988775  8999988654332211  111111112333332 2  2    34578999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ..++...... ... .+.+..|+.....+.+.+.+.+.. .+|.+|-
T Consensus        78 i~ag~~~~~g-~~R-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           78 ITAGAPQKPG-ESR-LDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             ECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             ECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            9998643321 122 467889999999999999988543 5666543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.55  E-value=9.6e-05  Score=64.61  Aligned_cols=77  Identities=12%  Similarity=0.097  Sum_probs=55.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|+|+ |.+|+.+++.|...|.+|++++|++.+  ...+.+...  ..+..   +..+.+++.+.+.++|+||+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r--~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~DvVI~  236 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVER--LSYLETLFG--SRVEL---LYSNSAEIETAVAEADLLIG  236 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHG--GGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHH--HHHHHHhhC--ceeEe---eeCCHHHHHHHHcCCCEEEE
Confidence            34589999999 999999999999999999999998653  222222211  11222   22345667777889999999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +++..
T Consensus       237 ~~~~~  241 (361)
T 1pjc_A          237 AVLVP  241 (361)
T ss_dssp             CCCCT
T ss_pred             CCCcC
Confidence            98754

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.54  E-value=0.00015  Score=63.19  Aligned_cols=101  Identities=15%  Similarity=0.221  Sum_probs=60.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |++++|.|.||||.+|+.+++.|.++. .++.++.+..+..  .........-.+..  ..|+.-.+  ++.++++|+||
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g--~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf   87 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG--QSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVF   87 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT--SCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEE
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC--CCHHHhCchhcCcc--cccceecc--hhHhcCCCEEE
Confidence            344689999999999999999999875 5888877643321  11111100000100  12432222  33456899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      .|++...                  +...+..+ +.|+ ++|-.|+..
T Consensus        88 ~atp~~~------------------s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           88 CCLPHGT------------------TQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             ECCCTTT------------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred             EcCCchh------------------HHHHHHHH-hCCC-EEEECCccc
Confidence            9875321                  23355666 6676 788888854

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.53  E-value=0.00017  Score=61.46  Aligned_cols=74  Identities=22%  Similarity=0.136  Sum_probs=51.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+++|+|+||+|.+|..+++.+...|++|+++++++.+  .....++     +...+ .|..+.+++.+.+.++|++|+ 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~-----ga~~~-~~~~~~~~~~~~~~~~d~vid-  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK--LALPLAL-----GAEEA-ATYAEVPERAKAWGGLDLVLE-  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGG--SHHHHHT-----TCSEE-EEGGGHHHHHHHTTSEEEEEE-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhc-----CCCEE-EECCcchhHHHHhcCceEEEE-
Confidence            46799999999999999999998899999999987653  2233332     22221 354441344444578999999 


Q ss_pred             ccc
Q 020924           84 ACP   86 (319)
Q Consensus        84 a~~   86 (319)
                      +|.
T Consensus       196 ~g~  198 (302)
T 1iz0_A          196 VRG  198 (302)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            864

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.50  E-value=0.0012  Score=56.42  Aligned_cols=113  Identities=12%  Similarity=0.022  Sum_probs=75.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhccCCCeEEE-EccCCChhhHHHHhcCcce
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEKASENLKLF-KADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +++|.|+|+ |.+|+.++..|+..|.  +|.+++++........  +............. ..|.   +    .++++|+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~daDi   92 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGSKL   92 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCCCE
Confidence            478999999 9999999999999886  8999998655332222  22211111112222 2232   2    2679999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ||-.||...... ... .+.+..|+.....+.+.+.+.+.. .++.+|-
T Consensus        93 VIitaG~p~kpG-~tR-~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           93 VVITAGARQQEG-ESR-LNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             EEECCSCCCCSS-CCT-TGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEeCCCCCCCC-CCH-HHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            999998654332 222 578899999999999999988543 5666554

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.48  E-value=0.00046  Score=56.95  Aligned_cols=103  Identities=16%  Similarity=0.106  Sum_probs=66.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCC-------------------ChhhHHHHHhhhccCC--CeEEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREP-------------------SDEKNARLYELEKASE--NLKLFK   61 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~~~   61 (319)
                      ++++|+|.|+ |.+|+++++.|+..|. ++++++++.                   .+.. ...+.+....+  .++.+.
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~-~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVE-SARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHH-HHHHHHHHHCTTSEEEEEC
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHH-HHHHHHHHHCCCcEEEEEe
Confidence            3578999997 8999999999999996 899988875                   2211 11122222123  345555


Q ss_pred             ccCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           62 ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .+++ .+.+.+.++++|+||.+...        + .        .-..+.++|++.++ .+|+.+.
T Consensus       108 ~~~~-~~~~~~~~~~~DvVi~~~d~--------~-~--------~~~~l~~~~~~~~~-p~i~~~~  154 (249)
T 1jw9_B          108 ALLD-DAELAALIAEHDLVLDCTDN--------V-A--------VRNQLNAGCFAAKV-PLVSGAA  154 (249)
T ss_dssp             SCCC-HHHHHHHHHTSSEEEECCSS--------H-H--------HHHHHHHHHHHHTC-CEEEEEE
T ss_pred             ccCC-HhHHHHHHhCCCEEEEeCCC--------H-H--------HHHHHHHHHHHcCC-CEEEeee
Confidence            5564 35667788899999997521        1 1        12346667777775 5666544

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.48  E-value=0.00074  Score=57.44  Aligned_cols=111  Identities=18%  Similarity=0.188  Sum_probs=68.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccC---CCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKAS---ENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+|.|+|+ |.+|..++..|+..|+  +|.++++++........ .+....   ...++..   .+.    +.++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~-~l~~~~~~~~~~~i~~---~~~----~a~~~aDvV   71 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAE-DIAHAAPVSHGTRVWH---GGH----SELADAQVV   71 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHH-HHTTSCCTTSCCEEEE---ECG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHH-hhhhhhhhcCCeEEEE---CCH----HHhCCCCEE
Confidence            47999998 9999999999999998  99999987543221111 221111   1222221   122    357899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |.+++...... ... .+....|+.....+++.+.+.+.. .+|.+|-
T Consensus        72 Ii~~~~~~~~g-~~r-~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN  117 (304)
T 2v6b_A           72 ILTAGANQKPG-ESR-LDLLEKNADIFRELVPQITRAAPDAVLLVTSN  117 (304)
T ss_dssp             EECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred             EEcCCCCCCCC-CcH-HHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99987543221 122 467788999999999999887543 4555443

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.47  E-value=0.002  Score=55.41  Aligned_cols=112  Identities=15%  Similarity=0.071  Sum_probs=72.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhH--HHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKN--ARLYELEK---ASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      +++|.|+|| |.+|..++..|+..|+ +|.+.+++++....  ..+.....   ...+++.. .   |   + ++++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-N---N---Y-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-C---C---H-HHHCCCC
Confidence            368999998 9999999999999998 99999998764432  11211110   11122221 2   2   2 4578999


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      +||-+++....... .. .+....|+.....+++.+.+.... .+|.+|-
T Consensus        85 ~VI~avg~p~k~g~-tr-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN  132 (328)
T 2hjr_A           85 VVIITAGVPRKPNM-TR-SDLLTVNAKIVGSVAENVGKYCPNAFVICITN  132 (328)
T ss_dssp             EEEECCSCCCCTTC-CS-GGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEcCCCCCCCCC-ch-hhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999875432211 11 356678888888999988876543 4455543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.47  E-value=0.00027  Score=61.03  Aligned_cols=75  Identities=16%  Similarity=0.074  Sum_probs=51.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   78 (319)
                      .+++|||+||+|.+|..+++.+...|.+|++++++++  +....+++     +... ..|..+.+   .+.+...  ++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~~~~~~-----ga~~-~~~~~~~~~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE--KLKIAKEY-----GAEY-LINASKEDILRQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHT-----TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHc-----CCcE-EEeCCCchHHHHHHHHhCCCCce
Confidence            4689999999999999999999999999999998654  33333332     1221 12444332   3333332  589


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|+++|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.47  E-value=0.00027  Score=62.11  Aligned_cols=77  Identities=13%  Similarity=0.011  Sum_probs=55.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|+|+ |.||+.+++.+...|.+|++.+|++..  ...+.+..  +..+.   .+..+.+++.+.+.++|+||+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~--l~~~~~~~--g~~~~---~~~~~~~~l~~~l~~aDvVi~  237 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDK--LRQLDAEF--CGRIH---TRYSSAYELEGAVKRADLVIG  237 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHT--TTSSE---EEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHH--HHHHHHhc--CCeeE---eccCCHHHHHHHHcCCCEEEE
Confidence            56789999998 999999999999999999999987652  22222211  11221   233456678888889999999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +++..
T Consensus       238 ~~~~p  242 (377)
T 2vhw_A          238 AVLVP  242 (377)
T ss_dssp             CCCCT
T ss_pred             CCCcC
Confidence            88643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.45  E-value=0.00023  Score=61.31  Aligned_cols=75  Identities=19%  Similarity=0.123  Sum_probs=51.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   78 (319)
                      .+++|||+||+|.+|..+++.+...|++|+++++++.+  .....++   +.. ..  .|..+.+   .+.+...  ++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~---Ga~-~~--~~~~~~~~~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEK--AAHAKAL---GAW-ET--IDYSHEDVAKRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHH--HHHHHHH---TCS-EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc---CCC-EE--EeCCCccHHHHHHHHhCCCCce
Confidence            36899999999999999999998899999999986543  3333332   111 22  2444433   3333333  589


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|+++|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.45  E-value=0.00026  Score=61.98  Aligned_cols=74  Identities=15%  Similarity=0.208  Sum_probs=50.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh-hhHHHHHhhhccCCCeEEEEccCCC--hhhHHHHhcCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKLFKADLLD--YDSVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~v   80 (319)
                      ++++|||+|+ |.+|..+++.+...|++|++++++... .+.....++     ++..+  | .+  .+.+.+.-.++|+|
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~-----ga~~v--~-~~~~~~~~~~~~~~~d~v  250 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET-----KTNYY--N-SSNGYDKLKDSVGKFDVI  250 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH-----TCEEE--E-CTTCSHHHHHHHCCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh-----CCcee--c-hHHHHHHHHHhCCCCCEE
Confidence            3789999999 999999999998899999999987610 122233332     33444  4 43  12333211468999


Q ss_pred             EEeccc
Q 020924           81 FHIACP   86 (319)
Q Consensus        81 i~~a~~   86 (319)
                      |+++|.
T Consensus       251 id~~g~  256 (366)
T 2cdc_A          251 IDATGA  256 (366)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.45  E-value=0.00026  Score=61.49  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=51.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh---HHHHh--cCc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS---VKSAI--VGC   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~--~~~   77 (319)
                      .+++|||+||+|.||..+++.+... |++|+++++++..  ....+++     +... ..|..+.+.   +.++.  .++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~--~~~~~~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA--VEAAKRA-----GADY-VINASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH--HHHHHHH-----TCSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHH--HHHHHHh-----CCCE-EecCCCccHHHHHHHHhcCCCc
Confidence            4679999999999999999999888 9999999987542  2333332     1111 135544333   44444  368


Q ss_pred             ceEEEeccc
Q 020924           78 NGVFHIACP   86 (319)
Q Consensus        78 d~vi~~a~~   86 (319)
                      |++|+++|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999874

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.44  E-value=0.00038  Score=62.07  Aligned_cols=70  Identities=17%  Similarity=0.143  Sum_probs=55.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++... .....        -+.+..|..|.+.+.++.+++|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p-~~~~a--------d~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASP-AGAVA--------DRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCH-HHHHS--------SEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCc-hhhhC--------CEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            45789999987 8999999999999999999998655432 11111        14566899999999999989999883

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.43  E-value=0.00015  Score=61.26  Aligned_cols=65  Identities=18%  Similarity=0.251  Sum_probs=46.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      ||+|.|+|+||.+|+.+++.|.+.|++|++.+|++..  ...+.+.     ++     +.++   ..++++++|+||-+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~--~~~~~~~-----g~-----~~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEG--RDRLQGM-----GI-----PLTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHH--HHHHHHT-----TC-----CCCC---SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHH--HHHHHhc-----CC-----CcCC---HHHHhcCCCEEEEcC
Confidence            4799999999999999999999999999999887542  2222221     22     2222   234567899999875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.43  E-value=0.00039  Score=60.19  Aligned_cols=75  Identities=12%  Similarity=0.145  Sum_probs=51.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   78 (319)
                      .+++|||+||+|.+|..+++.+...|++|+++++++++.  ..+.++     +...+ .|..+.+   .+.+...  ++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~l-----ga~~~-~~~~~~~~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT--EELLRL-----GAAYV-IDTSTAPLYETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH--HHHHHH-----TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhC-----CCcEE-EeCCcccHHHHHHHHhCCCCCc
Confidence            368999999999999999998888999999999887642  333333     12211 2444432   2333332  589


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      +||+++|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999864

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.43  E-value=0.0016  Score=55.72  Aligned_cols=116  Identities=15%  Similarity=0.063  Sum_probs=73.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHH--hhh---ccCCCeEEEEccCCChhhHHHHh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLY--ELE---KASENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~~~---~~~~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      |.+ +++|.|+|+ |.+|+.++..|++.|+ +|++.+++++......++  ...   ....++... .   |   . +.+
T Consensus         1 M~~-~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~a~   70 (317)
T 2ewd_A            1 MIE-RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---D---Y-ADI   70 (317)
T ss_dssp             CCC-CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGG
T ss_pred             CCC-CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---C---H-HHh
Confidence            453 368999998 9999999999999998 999999987643321111  100   001122211 1   2   2 356


Q ss_pred             cCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccc
Q 020924           75 VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSG  128 (319)
Q Consensus        75 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~  128 (319)
                      +++|+||-+++....... .. .+....|......+++.+.+.... .+|.+|..
T Consensus        71 ~~aDiVi~avg~p~~~g~-~r-~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp  123 (317)
T 2ewd_A           71 SGSDVVIITASIPGRPKD-DR-SELLFGNARILDSVAEGVKKYCPNAFVICITNP  123 (317)
T ss_dssp             TTCSEEEECCCCSSCCSS-CG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred             CCCCEEEEeCCCCCCCCC-cH-HHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence            889999999975443221 22 455677888888888888776433 45556553

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.42  E-value=0.00043  Score=60.90  Aligned_cols=70  Identities=11%  Similarity=0.057  Sum_probs=54.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|+|+ |.+|+.+++.+.+.|++|++++.++..... .   +     --.++..|..|.+.+.++.+.+|+|..
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-~---~-----ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-Y---V-----AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-G---G-----SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-h---h-----CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            45689999987 889999999999999999999876543211 1   0     124667899999999999988998754

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.40  E-value=0.0026  Score=54.47  Aligned_cols=117  Identities=15%  Similarity=0.100  Sum_probs=73.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHH--HHHhhhc-cCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNA--RLYELEK-ASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      .+++|.|+|| |.+|..++..|+..|+ +|.++++++......  .+..... .....++...  +|   . ++++++|+
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD~   75 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLAGADV   75 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCE
Confidence            3468999998 9999999999999998 999988887643221  1111100 0111111110  22   2 45789999


Q ss_pred             EEEecccCCCCCCC---CccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           80 VFHIACPAPSTTVP---NPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        80 vi~~a~~~~~~~~~---~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ||-+++........   .+-......|+.....+.+.+.+...+ .+|.+|-
T Consensus        76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  127 (322)
T 1t2d_A           76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN  127 (322)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99998754321111   012456778888888899888877543 4555543

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.38  E-value=0.00031  Score=56.59  Aligned_cols=66  Identities=21%  Similarity=0.286  Sum_probs=47.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+|+|.|+| +|.+|+.+++.|.+.|++|++.+|+.+.  ...+.   .  .+++..        ++.++++++|+||.+
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~--~~~~~---~--~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKR--TARLF---P--SAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHH--HHHHS---B--TTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHH---H--cCCcee--------cHHHHHhCCCEEEEC
Confidence            357899998 6999999999999999999999987542  22221   1  133321        355677899999987


Q ss_pred             cc
Q 020924           84 AC   85 (319)
Q Consensus        84 a~   85 (319)
                      ..
T Consensus        91 v~   92 (215)
T 2vns_A           91 VF   92 (215)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.38  E-value=0.00014  Score=55.46  Aligned_cols=73  Identities=14%  Similarity=0.061  Sum_probs=50.8

Q ss_pred             chHHHHHHHHHHHHCCCeEEEEEcCCChhhH--HHHHhhhccCCCeEEEEccCCCh--hhHHHHhc------CcceEEEe
Q 020924           14 GGFLASWVVKLLLSRDYFVHGTAREPSDEKN--ARLYELEKASENLKLFKADLLDY--DSVKSAIV------GCNGVFHI   83 (319)
Q Consensus        14 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~------~~d~vi~~   83 (319)
                      +|.++.+.++.|.+.|++|++..|+......  ...+.+...+.+...+.+|++++  +++.++++      +-|++|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            4678899999999999999988886543210  11122222234567778999998  88877653      23999999


Q ss_pred             ccc
Q 020924           84 ACP   86 (319)
Q Consensus        84 a~~   86 (319)
                      ||.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            985

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.37  E-value=0.00018  Score=58.18  Aligned_cols=38  Identities=13%  Similarity=0.166  Sum_probs=32.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEE-EEcCCCh
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHG-TAREPSD   41 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~   41 (319)
                      |+||+|.|+| +|.+|++++..|.+.|++|++ .+|+++.
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~   59 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPAS   59 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGG
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHH
Confidence            5568999999 699999999999999999998 7776553

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.36  E-value=0.00056  Score=57.26  Aligned_cols=75  Identities=19%  Similarity=0.149  Sum_probs=49.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHH-HhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARL-YELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +++++++|+|+ |.+|++++..|++.|++|++.+|+.++.  ..+ +.+... ..+..  .|+   +++.+  .++|+||
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a--~~l~~~~~~~-~~~~~--~~~---~~~~~--~~~DivI  185 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT--KELAERFQPY-GNIQA--VSM---DSIPL--QTYDLVI  185 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH--HHHHHHHGGG-SCEEE--EEG---GGCCC--SCCSEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHcccc-CCeEE--eeH---HHhcc--CCCCEEE
Confidence            56789999998 7899999999999999999999986532  222 222111 12222  232   11110  3789999


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      ++++...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9987543

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.32  E-value=0.0012  Score=56.61  Aligned_cols=114  Identities=12%  Similarity=0.128  Sum_probs=73.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHH--HHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNAR--LYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +++||.|+|| |.+|+.++-.|+..+.  +|.+++++........  +.........+++.. |  +    .++++++|+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDv   79 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            4579999999 9999999999988775  8999988654322211  111111112333332 2  2    345789999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ||..++...... ... ......|+.....+.+.+.+.+.. .+|.+|-
T Consensus        80 Vii~ag~~~k~g-~~R-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           80 VVITAGAPQKPG-ETR-LDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             EEECCCCC------CH-HHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             EEEcCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999998643221 122 567889999999999999887543 5666543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.32  E-value=0.0018  Score=55.36  Aligned_cols=112  Identities=13%  Similarity=0.062  Sum_probs=69.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHH--HhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARL--YELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +|+|.|+|+ |.+|..++..|+..|+  +|++++|+........+  ..-........+...  ++.    +.++++|+|
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~V   79 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMV   79 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCEE
Confidence            478999998 9999999999999998  99999987533221112  111001112222211  122    246789999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEe
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVV  125 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~  125 (319)
                      |-+++...... .. .......|+.....+++.+.+.+.+ .+|.+
T Consensus        80 ii~v~~~~~~g-~~-r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~  123 (319)
T 1lld_A           80 VITAGPRQKPG-QS-RLELVGATVNILKAIMPNLVKVAPNAIYMLI  123 (319)
T ss_dssp             EECCCCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             EECCCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence            99987543221 12 2466778888888888888775433 34443

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.30  E-value=0.00025  Score=58.06  Aligned_cols=36  Identities=17%  Similarity=0.324  Sum_probs=27.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEE-EcCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGT-AREP   39 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~   39 (319)
                      |+|++|.|+|+ |.+|+.+++.+.+.+.++.+. +|+.
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            34589999999 999999999999886676663 4443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.30  E-value=0.00057  Score=59.71  Aligned_cols=74  Identities=23%  Similarity=0.208  Sum_probs=49.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHh-cCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAI-VGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d~   79 (319)
                      .+++|||+||+|.+|..+++.+...|++|++++++++  +...+.++     +...+ .|..+.+   .+.+.. .++|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~--~~~~~~~~-----Ga~~~-~~~~~~~~~~~~~~~~~~g~D~  234 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDE--KSAFLKSL-----GCDRP-INYKTEPVGTVLKQEYPEGVDV  234 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHT-----TCSEE-EETTTSCHHHHHHHHCTTCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHH--HHHHHHHc-----CCcEE-EecCChhHHHHHHHhcCCCCCE
Confidence            3679999999999999999999899999999998754  22333332     22221 2443322   222222 25899


Q ss_pred             EEEecc
Q 020924           80 VFHIAC   85 (319)
Q Consensus        80 vi~~a~   85 (319)
                      ||+++|
T Consensus       235 vid~~g  240 (362)
T 2c0c_A          235 VYESVG  240 (362)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999986

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.29  E-value=0.0024  Score=54.43  Aligned_cols=112  Identities=16%  Similarity=0.090  Sum_probs=71.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCChhhHHHHHhhhcc----CCCeEEEEccCCChhhHHHHhcCcce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKA----SENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |+|.|+|+ |.+|..++..|++.  |++|.++++++........ .+...    .....+...  +|.   ++ ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~-~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKAL-DMYESGPVGLFDTKVTGS--NDY---AD-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHH-HHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHH-hHHhhhhcccCCcEEEEC--CCH---HH-HCCCCE
Confidence            47999998 99999999999885  7999999998764432211 11110    111121111  222   23 678999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      ||-+++......  ......+..|+.....+.+.+.+.+.+ .+|.+|-
T Consensus        73 Viiav~~p~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN  119 (310)
T 1guz_A           73 VIITAGLPRKPG--MTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN  119 (310)
T ss_dssp             EEECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             EEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence            999987432211  112466778999999999998877533 5566543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.27  E-value=0.0016  Score=58.73  Aligned_cols=76  Identities=18%  Similarity=0.128  Sum_probs=53.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-c
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVG-C   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~   77 (319)
                      |++++|+|+|.|. |..|..+++.|.++|++|++.+++....  ....+++     .++++..+.-.  +   ..+.+ +
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~-----~gi~~~~g~~~--~---~~~~~~~   73 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE-----EGIKVVCGSHP--L---ELLDEDF   73 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH-----TTCEEEESCCC--G---GGGGSCE
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh-----CCCEEEECCCh--H---HhhcCCC
Confidence            4466799999999 8899999999999999999999865321  1222322     35666655431  1   23455 8


Q ss_pred             ceEEEecccC
Q 020924           78 NGVFHIACPA   87 (319)
Q Consensus        78 d~vi~~a~~~   87 (319)
                      |.||...|..
T Consensus        74 d~vv~spgi~   83 (451)
T 3lk7_A           74 CYMIKNPGIP   83 (451)
T ss_dssp             EEEEECTTSC
T ss_pred             CEEEECCcCC
Confidence            9999987764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.26  E-value=0.00019  Score=60.02  Aligned_cols=70  Identities=13%  Similarity=0.084  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +++++++|+|+ |..|++++..|.+.|. +|++.+|+.++..  .+.      ..+..     ...+++.+++.++|+||
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~--~la------~~~~~-----~~~~~~~~~~~~aDiVI  180 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN--NWS------LNINK-----INLSHAESHLDEFDIII  180 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT--TCC------SCCEE-----ECHHHHHHTGGGCSEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH--HHH------Hhccc-----ccHhhHHHHhcCCCEEE
Confidence            45789999997 8999999999999998 8999999876421  110      11221     13456677788999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      ++...
T Consensus       181 naTp~  185 (277)
T 3don_A          181 NTTPA  185 (277)
T ss_dssp             ECCC-
T ss_pred             ECccC
Confidence            98654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.26  E-value=0.00059  Score=57.90  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=32.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +++|.|.||+|.+|..++..|.+.|++|++.+|++.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            468999998899999999999999999999988754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.24  E-value=0.0006  Score=59.10  Aligned_cols=71  Identities=20%  Similarity=0.242  Sum_probs=48.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh---hhHHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY---DSVKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~d   78 (319)
                      .+++|||+||+|.+|..+++.+...|.+|+++ +++.  +....+++     +...  .| .+.   +.+.+...  ++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~--~~~~~~~l-----Ga~~--i~-~~~~~~~~~~~~~~~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGS--DLEYVRDL-----GATP--ID-ASREPEDYAAEHTAGQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHH--HHHHHHHH-----TSEE--EE-TTSCHHHHHHHHHTTSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHH--HHHHHHHc-----CCCE--ec-cCCCHHHHHHHHhcCCCce
Confidence            36799999999999999999999999999998 5543  33333333     2333  33 222   22333332  689


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      ++|+++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999986

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.24  E-value=0.0011  Score=55.56  Aligned_cols=75  Identities=16%  Similarity=0.108  Sum_probs=49.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++++++++|+|+ |.+|++++..|++.|. +|++.+|+.++... ..+.+... ..+....  +.+   +   ..++|+|
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~-la~~~~~~-~~~~~~~--~~~---l---~~~aDiI  191 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQ-LAELVAAY-GEVKAQA--FEQ---L---KQSYDVI  191 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHH-HHHHHGGG-SCEEEEE--GGG---C---CSCEEEE
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHH-HHHHhhcc-CCeeEee--HHH---h---cCCCCEE
Confidence            356889999998 8899999999999996 99999998654221 11222111 1233332  211   1   1578999


Q ss_pred             EEecccC
Q 020924           81 FHIACPA   87 (319)
Q Consensus        81 i~~a~~~   87 (319)
                      |++....
T Consensus       192 InaTp~g  198 (281)
T 3o8q_A          192 INSTSAS  198 (281)
T ss_dssp             EECSCCC
T ss_pred             EEcCcCC
Confidence            9987543

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.23  E-value=0.00014  Score=66.76  Aligned_cols=74  Identities=18%  Similarity=0.030  Sum_probs=44.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +++++++|||| |.+|++++..|++.|++|++++|+.++.  ..+....  +..+  +  ++.|.+.+  ....+|++||
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a--~~la~~~--~~~~--~--~~~dl~~~--~~~~~DilVN  430 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERA--LELAEAI--GGKA--L--SLTDLDNY--HPEDGMVLAN  430 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHH--HHHHHHT--TC-C--E--ETTTTTTC----CCSEEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHc--CCce--e--eHHHhhhc--cccCceEEEE
Confidence            45678999999 7999999999999999999999976532  2222111  1111  1  22221111  1235799999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +++..
T Consensus       431 ~agvg  435 (523)
T 2o7s_A          431 TTSMG  435 (523)
T ss_dssp             CSSTT
T ss_pred             CCCCC
Confidence            99864

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.22  E-value=0.00028  Score=60.91  Aligned_cols=95  Identities=19%  Similarity=0.145  Sum_probs=58.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC---CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD---YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +|++|.|.||||.+|+.+++.|.+++   .+++++....+......   +  .+..+.+  .|+ +.+    .++++|+|
T Consensus         2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~---~--~~~~i~~--~~~-~~~----~~~~vDvV   69 (336)
T 2r00_A            2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR---F--NGKTVRV--QNV-EEF----DWSQVHIA   69 (336)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE---E--TTEEEEE--EEG-GGC----CGGGCSEE
T ss_pred             CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee---e--cCceeEE--ecC-ChH----HhcCCCEE
Confidence            45799999999999999999999873   56777663222111000   0  0111222  222 122    23589999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      |-|.+..                  .+...+..+.+.|+ ++|-.|+..
T Consensus        70 f~a~g~~------------------~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           70 LFSAGGE------------------LSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             EECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             EECCCch------------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence            9986531                  13446667777887 788888864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.22  E-value=0.00091  Score=58.51  Aligned_cols=74  Identities=15%  Similarity=0.135  Sum_probs=54.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHH-hhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLY-ELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .+.+|||+|+ |.||..+++.+...|++|+++++++.+  ..... ++     +... ..|..+.+.+.++..++|+||+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--~~~~~~~l-----Ga~~-v~~~~~~~~~~~~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSK--KEEALKNF-----GADS-FLVSRDQEQMQAAAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG--HHHHHHTS-----CCSE-EEETTCHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhc-----CCce-EEeccCHHHHHHhhCCCCEEEE
Confidence            4689999996 999999999998899999999987653  22222 22     2222 2366666667666678999999


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      +++.
T Consensus       258 ~~g~  261 (366)
T 1yqd_A          258 TVSA  261 (366)
T ss_dssp             CCSS
T ss_pred             CCCc
Confidence            9874

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.21  E-value=0.0015  Score=58.38  Aligned_cols=93  Identities=14%  Similarity=0.214  Sum_probs=60.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CC---eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC--Ch-hhHHHHhcCcc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DY---FVHGTAREPSDEKNARLYELEKASENLKLFKADLL--DY-DSVKSAIVGCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~-~~~~~~~~~~d   78 (319)
                      ++|+|.| .|.||+.+++.|+++ ++   +|++.+......  ...+..     ++++...+++  |. +.+.+++++.|
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~--~~~~~~-----g~~~~~~~Vdadnv~~~l~aLl~~~D   85 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV--DVAQQY-----GVSFKLQQITPQNYLEVIGSTLEEND   85 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC--CHHHHH-----TCEEEECCCCTTTHHHHTGGGCCTTC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh--hHHhhc-----CCceeEEeccchhHHHHHHHHhcCCC
Confidence            6799999 599999999999886 45   688887654421  111111     3455555554  44 33556777779


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEe
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV  125 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~  125 (319)
                      +|||++-..       .           ...++++|.+.|+ .+|-+
T Consensus        86 vVIN~s~~~-------~-----------~l~Im~acleaGv-~YlDT  113 (480)
T 2ph5_A           86 FLIDVSIGI-------S-----------SLALIILCNQKGA-LYINA  113 (480)
T ss_dssp             EEEECCSSS-------C-----------HHHHHHHHHHHTC-EEEES
T ss_pred             EEEECCccc-------c-----------CHHHHHHHHHcCC-CEEEC
Confidence            999854211       1           3458999999998 55443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.20  E-value=0.00023  Score=61.94  Aligned_cols=80  Identities=16%  Similarity=0.172  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |++++|+|.|.|+ |.+|.+++..|++.|++|++.+|++...  ..+.+...   ..+++++ ...+.-..++.++++++
T Consensus        25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~--~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~a  100 (356)
T 3k96_A           25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHV--DEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGV  100 (356)
T ss_dssp             --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHH--HHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTC
T ss_pred             ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcC
Confidence            5566689999987 9999999999999999999999975532  22222100   0111111 01111113456677889


Q ss_pred             ceEEEec
Q 020924           78 NGVFHIA   84 (319)
Q Consensus        78 d~vi~~a   84 (319)
                      |+||-+.
T Consensus       101 DvVilaV  107 (356)
T 3k96_A          101 TDILIVV  107 (356)
T ss_dssp             CEEEECC
T ss_pred             CEEEECC
Confidence            9999764

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.18  E-value=0.0067  Score=52.70  Aligned_cols=116  Identities=16%  Similarity=0.105  Sum_probs=73.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-----eEEEEEcCCChh----hHHHHHhhhccC-CCeEEEEccCCChhhHHHHh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-----FVHGTAREPSDE----KNARLYELEKAS-ENLKLFKADLLDYDSVKSAI   74 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~----~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~   74 (319)
                      .+||.|+||+|.||++++-.|+..+.     .+.+...+.+..    ....+ ++.+.. +-..-+.  +.  ....+.+
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~am-DL~h~~~p~~~~v~--i~--~~~y~~~  106 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAM-ELEDSLYPLLREVS--IG--IDPYEVF  106 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEE--EE--SCHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHH-hHHhhhhhhcCCcE--Ee--cCCHHHh
Confidence            46899999999999999999988752     255554443321    11122 222221 1111111  11  1346678


Q ss_pred             cCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CC-CEEEEecc
Q 020924           75 VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KV-KRVIVVSS  127 (319)
Q Consensus        75 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~-~~iv~~SS  127 (319)
                      +++|+||-.||...... ... .+.++.|+...+.+.+.+.+. +. ..++.+|-
T Consensus       107 ~daDvVVitag~prkpG-~tR-~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          107 EDVDWALLIGAKPRGPG-MER-AALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             TTCSEEEECCCCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCCEEEEcCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            89999999988643222 223 678999999999999999875 43 36666664

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.17  E-value=0.0028  Score=51.91  Aligned_cols=158  Identities=16%  Similarity=0.082  Sum_probs=88.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----Ccce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----GCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~   79 (319)
                      ++|+|+|++|.+|+.+++.+.+. |+++.++.....+ ....+.      .... +..|.++++...+.+.     +.++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d-l~~~~~------~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~   72 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP-LSLLTD------GNTE-VVIDFTHPDVVMGNLEFLIDNGIHA   72 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC-THHHHH------TTCC-EEEECSCTTTHHHHHHHHHHTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC-HHHHhc------cCCc-EEEEccChHHHHHHHHHHHHcCCCE
Confidence            47999999999999999999865 8998876654332 111111      1223 4468888776665442     5677


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccC----------CCCCCCcccCCCCC
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLN----------PRWPKGQIMDETCW  148 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~----------~~~~~~~~~~E~~~  148 (319)
                      |+-..|..       +  .       ....+.++|++. ++ .+++.++. ..+..          ..+ .+..+-|.+-
T Consensus        73 VigTTG~~-------~--e-------~~~~l~~aa~~~~~~-~vv~a~N~-siGv~ll~~l~~~aa~~~-~dieIiE~HH  133 (245)
T 1p9l_A           73 VVGTTGFT-------A--E-------RFQQVESWLVAKPNT-SVLIAPNF-AIGAVLSMHFAKQAARFF-DSAEVIELHH  133 (245)
T ss_dssp             EECCCCCC-------H--H-------HHHHHHHHHHTSTTC-EEEECSCC-CHHHHHHHHHHHHHGGGC-SEEEEEEEEC
T ss_pred             EEcCCCCC-------H--H-------HHHHHHHHHHhCCCC-CEEEECCc-cHHHHHHHHHHHHHHhhc-CCEEEEECcc
Confidence            66544321       1  1       012355556555 54 67776653 23221          111 1333334322


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhh----------------h---hCCceEEEEecCcccCCC
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFG----------------K---KTGLDVVTICPNLVLGPL  195 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----------------~---~~~~~~~~lrp~~v~G~~  195 (319)
                      ...     ...|-|.++..+|.+.....                +   ..++.+..+|.+.+.|..
T Consensus       134 ~~K-----~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h  194 (245)
T 1p9l_A          134 PHK-----ADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQ  194 (245)
T ss_dssp             TTC-----CSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEE
T ss_pred             cCC-----CCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEE
Confidence            111     01235777777776654321                0   126788999999988864

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.17  E-value=0.00048  Score=58.77  Aligned_cols=35  Identities=20%  Similarity=0.223  Sum_probs=31.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ||+|.|.|+ |.+|+.++..|.+.|++|++.+|+++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   37 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA   37 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence            468999997 99999999999999999999998754

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.16  E-value=0.0042  Score=53.17  Aligned_cols=112  Identities=15%  Similarity=0.177  Sum_probs=71.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHH--HhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARL--YELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |+|.|+|+ |.+|+.++..|++.|+  +|+++++++........  ...........+..   +|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            47999998 9999999999999999  99999987543222111  11000011122221   232    2467899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      -+++...... ... .+....|+.....+++.+.+.... .+|.+|-
T Consensus        73 iav~~~~~~g-~~r-~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN  117 (319)
T 1a5z_A           73 VAAGVPQKPG-ETR-LQLLGRNARVMKEIARNVSKYAPDSIVIVVTN  117 (319)
T ss_dssp             ECCCCCCCSS-CCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EccCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            9887543221 112 456778888889999988876443 5555543

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.16  E-value=0.00052  Score=58.66  Aligned_cols=71  Identities=15%  Similarity=0.106  Sum_probs=46.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++.+|+|.|+|. |.+|+.+++.|++.|+ +|++.+|++.......+.+     .++..       ..+..++++++|+|
T Consensus        21 ~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~-----~g~~~-------~~~~~e~~~~aDvV   87 (312)
T 3qsg_A           21 QSNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE-----LGVSC-------KASVAEVAGECDVI   87 (312)
T ss_dssp             ----CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH-----TTCEE-------CSCHHHHHHHCSEE
T ss_pred             cCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH-----CCCEE-------eCCHHHHHhcCCEE
Confidence            445689999986 9999999999999999 9999998741112222222     12222       12455667788999


Q ss_pred             EEecc
Q 020924           81 FHIAC   85 (319)
Q Consensus        81 i~~a~   85 (319)
                      |-+..
T Consensus        88 i~~vp   92 (312)
T 3qsg_A           88 FSLVT   92 (312)
T ss_dssp             EECSC
T ss_pred             EEecC
Confidence            98763

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.16  E-value=0.0009  Score=59.34  Aligned_cols=72  Identities=21%  Similarity=0.219  Sum_probs=51.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.+++|+|+|+ |.+|+.+++.|...|. +|++.+|+..+.. .....+     +...     .+.+++.+.+.++|+||
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~-~la~~~-----g~~~-----~~~~~l~~~l~~aDvVi  232 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDL-----GGEA-----VRFDELVDHLARSDVVV  232 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHH-----TCEE-----CCGGGHHHHHHTCSEEE
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHc-----CCce-----ecHHhHHHHhcCCCEEE
Confidence            46789999998 9999999999999998 8999998764321 111221     1222     22345677778999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+.+.
T Consensus       233 ~at~~  237 (404)
T 1gpj_A          233 SATAA  237 (404)
T ss_dssp             ECCSS
T ss_pred             EccCC
Confidence            98753

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.15  E-value=0.003  Score=53.78  Aligned_cols=111  Identities=13%  Similarity=0.086  Sum_probs=70.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHH--Hhhh-ccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARL--YELE-KASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+|.|+| +|.+|..++..|++.|  ++|++.+|++........  .... ..+..+.....   |.    +.++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DW----AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CH----HHhCCCCEE
Confidence            6899999 5999999999999989  899999987543222111  1110 00112333222   22    356789999


Q ss_pred             EEecccCCC----CCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           81 FHIACPAPS----TTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        81 i~~a~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      |-+++....    .. ... ......|+.....+++.+.+...+ .+|.+|
T Consensus        74 iiav~~~~~~~~~~g-~~r-~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPT-GDR-FAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecCCcccCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            998875431    11 112 456778988888999988876443 455543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.15  E-value=0.0011  Score=57.56  Aligned_cols=73  Identities=11%  Similarity=0.069  Sum_probs=49.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHh--cCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAI--VGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d~v   80 (319)
                      ++|+|+||+|.+|...++.+...|.+|+++++++++  ...+.++     +...+ .|..+.+   .+.+..  .++|++
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~--~~~~~~~-----Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~v  237 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ--IALLKDI-----GAAHV-LNEKAPDFEATLREVMKAEQPRIF  237 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG--HHHHHHH-----TCSEE-EETTSTTHHHHHHHHHHHHCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc-----CCCEE-EECCcHHHHHHHHHHhcCCCCcEE
Confidence            689999999999999999888899999999987653  3333333     12211 2443322   233333  269999


Q ss_pred             EEeccc
Q 020924           81 FHIACP   86 (319)
Q Consensus        81 i~~a~~   86 (319)
                      |+++|.
T Consensus       238 id~~g~  243 (349)
T 3pi7_A          238 LDAVTG  243 (349)
T ss_dssp             EESSCH
T ss_pred             EECCCC
Confidence            999863

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.14  E-value=0.0035  Score=53.34  Aligned_cols=111  Identities=17%  Similarity=0.153  Sum_probs=73.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhcc---CCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKA---SENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |||.|+|+ |.+|+.++-.|+..+  .++.+++++..+..... ..+...   ...+++.. +  +    .++++++|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a-~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHA-EDILHATPFAHPVWVWA-G--S----YGDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHH-HHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHH-HHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            58999998 999999999999877  68999998754322211 122111   12333332 2  2    3357899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |..++...... ... ......|......+.+.+.+.+.. .+|.+|-
T Consensus        72 ii~ag~~~~~g-~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           72 VLAAGVAQRPG-ETR-LQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EECCCCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EECCCCCCCCC-cCH-HHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99998643322 122 467889999999999999887543 5666543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.14  E-value=0.0028  Score=57.12  Aligned_cols=99  Identities=20%  Similarity=0.257  Sum_probs=71.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~   83 (319)
                      -++|+|.|| |-+|.++++.| +++++|.++.++..  .+..+.+.   .++..++.+|-+|.+-+.+. +.++|++|-+
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~--r~~~la~~---l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~  307 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQ--RAEKLSEE---LENTIVFCGDAADQELLTEENIDQVDVFIAL  307 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHH--HHHHHHHH---CTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHH--HHHHHHHH---CCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence            368999998 99999999998 55699999987655  44443332   25778999999999988875 5688999876


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .+        ++     ++|+.    .+..|++.|++|+|-.-.
T Consensus       308 T~--------~D-----e~Ni~----~~llAk~~gv~kvIa~vn  334 (461)
T 4g65_A          308 TN--------ED-----ETNIM----SAMLAKRMGAKKVMVLIQ  334 (461)
T ss_dssp             CS--------CH-----HHHHH----HHHHHHHTTCSEEEEECS
T ss_pred             cc--------Cc-----HHHHH----HHHHHHHcCCcccccccc
Confidence            42        22     34443    344567789988776544

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.14  E-value=0.0012  Score=57.43  Aligned_cols=33  Identities=27%  Similarity=0.327  Sum_probs=28.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTARE   38 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (319)
                      ++|.|.||||.+|+.+++.|.+++ .+|.++.++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            689999999999999999998764 688888754

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.10  E-value=0.0011  Score=55.12  Aligned_cols=57  Identities=14%  Similarity=0.091  Sum_probs=48.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++++|+|+++.+|+.++..|+++|..|++..|+..                            .+.+.++++|+||
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~----------------------------~L~~~~~~ADIVI  208 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK----------------------------DLSLYTRQADLII  208 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS----------------------------CHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch----------------------------hHHHHhhcCCEEE
Confidence            367899999999999999999999999999998865422                            3567788999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      ..++.
T Consensus       209 ~Avg~  213 (285)
T 3p2o_A          209 VAAGC  213 (285)
T ss_dssp             ECSSC
T ss_pred             ECCCC
Confidence            98874

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.10  E-value=0.00073  Score=58.11  Aligned_cols=99  Identities=17%  Similarity=0.169  Sum_probs=59.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCC---ChhhHHHHHhh-hccCC--CeEEEEccCCChhhHHHHhcCc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREP---SDEKNARLYEL-EKASE--NLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~---~~~~~~~~~~~-~~~~~--~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |++|.|.||||++|+.+++.|.+ .++++..+..+.   ...+  .+.+. +....  .+.+...  .+.+   ++.+++
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk--~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~   76 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGK--LISDLHPQLKGIVELPLQPM--SDIS---EFSPGV   76 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTS--BHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTC
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCC--chHHhCccccCccceeEecc--CCHH---HHhcCC
Confidence            57999999999999999999988 457887776544   2211  11111 00000  1222111  0222   222689


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      |+||-|.+..                  .+..++..+.+.|+ ++|=+|+..
T Consensus        77 Dvvf~a~p~~------------------~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           77 DVVFLATAHE------------------VSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             SEEEECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CEEEECCChH------------------HHHHHHHHHHHCCC-EEEEcCCcc
Confidence            9999876421                  13346666677887 788888864

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.10  E-value=0.0017  Score=54.19  Aligned_cols=72  Identities=18%  Similarity=0.168  Sum_probs=48.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHH-HhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARL-YELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +++++++|+|+ |.+|++++..|.+.|. +|++.+|+.++.  ..+ +.+..  .++..+  ++.+   +..  .++|+|
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a--~~la~~~~~--~~~~~~--~~~~---l~~--~~~Div  185 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKA--LALRNELDH--SRLRIS--RYEA---LEG--QSFDIV  185 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHH--HHHHHHHCC--TTEEEE--CSGG---GTT--CCCSEE
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH--HHHHHHhcc--CCeeEe--eHHH---hcc--cCCCEE
Confidence            56789999998 8899999999999995 999999986532  222 22211  123332  2222   211  578999


Q ss_pred             EEeccc
Q 020924           81 FHIACP   86 (319)
Q Consensus        81 i~~a~~   86 (319)
                      |++...
T Consensus       186 InaTp~  191 (272)
T 3pwz_A          186 VNATSA  191 (272)
T ss_dssp             EECSSG
T ss_pred             EECCCC
Confidence            998654

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.10  E-value=0.00092  Score=49.67  Aligned_cols=87  Identities=24%  Similarity=0.308  Sum_probs=56.3

Q ss_pred             CCCeEEEeCcc---hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            4 EKERVCVTGAG---GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ..++|.|.|+|   |.+|..+++.|++.|++|+.++++....            .++..       ..++.++.+.+|++
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------------~G~~~-------~~s~~el~~~vDlv   73 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------EGLKC-------YRSVRELPKDVDVI   73 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------TTEEC-------BSSGGGSCTTCCEE
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------------CCeee-------cCCHHHhCCCCCEE
Confidence            34789999998   8999999999999999987766543210            12221       12233334468888


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +-+...          ..        ...+++.+.+.+++.++..+|
T Consensus        74 ii~vp~----------~~--------v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           74 VFVVPP----------KV--------GLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             EECSCH----------HH--------HHHHHHHHHHTTCCEEEECTT
T ss_pred             EEEeCH----------HH--------HHHHHHHHHHcCCCEEEEcCc
Confidence            876521          11        334666677788888777654

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.10  E-value=0.0018  Score=52.20  Aligned_cols=71  Identities=20%  Similarity=0.226  Sum_probs=51.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++|||.|| |-+|...++.|++.|++|++++....+.    +..+.. ..+++++..+... +    .++++|.||
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~----l~~l~~-~~~i~~i~~~~~~-~----dL~~adLVI   96 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAE----INEWEA-KGQLRVKRKKVGE-E----DLLNVFFIV   96 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHH----HHHHHH-TTSCEEECSCCCG-G----GSSSCSEEE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHH----HHHHHH-cCCcEEEECCCCH-h----HhCCCCEEE
Confidence            467899999998 8999999999999999999998765532    122211 2467777665542 2    256788888


Q ss_pred             Ee
Q 020924           82 HI   83 (319)
Q Consensus        82 ~~   83 (319)
                      -+
T Consensus        97 aA   98 (223)
T 3dfz_A           97 VA   98 (223)
T ss_dssp             EC
T ss_pred             EC
Confidence            43

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.09  E-value=0.0008  Score=58.22  Aligned_cols=73  Identities=21%  Similarity=0.132  Sum_probs=49.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHhcCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~d~v   80 (319)
                      .+++|||+|+ |.+|..+++.+...|++|++++|++..  ...++++     ++.. ..|..+.+   .+.+...++|+|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~l-----Ga~~-~~d~~~~~~~~~~~~~~~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK--LELAKEL-----GADL-VVNPLKEDAAKFMKEKVGGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHT-----TCSE-EECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHC-----CCCE-EecCCCccHHHHHHHHhCCCCEE
Confidence            4679999999 779999999998999999999987542  2333332     2222 24655432   233333578999


Q ss_pred             EEecc
Q 020924           81 FHIAC   85 (319)
Q Consensus        81 i~~a~   85 (319)
                      |++++
T Consensus       235 id~~g  239 (339)
T 1rjw_A          235 VVTAV  239 (339)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99986

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.08  E-value=0.002  Score=54.73  Aligned_cols=72  Identities=19%  Similarity=0.207  Sum_probs=53.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++|+|.|+ |.+|+.+++.|...|.+|++.+|+..+  ...+.+.     +++.+     +..++.++++++|+|+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~--~~~~~~~-----g~~~~-----~~~~l~~~l~~aDvVi  220 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAH--LARITEM-----GLVPF-----HTDELKEHVKDIDICI  220 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHT-----TCEEE-----EGGGHHHHSTTCSEEE
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHC-----CCeEE-----chhhHHHHhhCCCEEE
Confidence            356799999997 999999999999999999999987642  2222221     23322     2346778889999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+...
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            98754

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=97.08  E-value=0.0041  Score=53.38  Aligned_cols=73  Identities=8%  Similarity=0.023  Sum_probs=51.0

Q ss_pred             CCCeEEEeCcchHHHH-HHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh-cCcceEE
Q 020924            4 EKERVCVTGAGGFLAS-WVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI-VGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi   81 (319)
                      .+|+|.|.|. |..|. .+++.|.++|++|++.+++........+++     .+++++.+.  +.+.   +. .++|.||
T Consensus         3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~-----~gi~v~~g~--~~~~---l~~~~~d~vV   71 (326)
T 3eag_A            3 AMKHIHIIGI-GGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEA-----LGIDVYEGF--DAAQ---LDEFKADVYV   71 (326)
T ss_dssp             CCCEEEEESC-CSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHH-----TTCEEEESC--CGGG---GGSCCCSEEE
T ss_pred             CCcEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHh-----CCCEEECCC--CHHH---cCCCCCCEEE
Confidence            4689999998 77888 589999999999999998765332233332     356666552  3332   23 4689999


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      ...|..
T Consensus        72 ~Spgi~   77 (326)
T 3eag_A           72 IGNVAK   77 (326)
T ss_dssp             ECTTCC
T ss_pred             ECCCcC
Confidence            987764

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.08  E-value=0.00052  Score=59.62  Aligned_cols=95  Identities=18%  Similarity=0.150  Sum_probs=56.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC---eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY---FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +++|.|.||||++|+.+++.|.++++   ++..+.-..+..+...   +    .+.....-++. .+    .++++|+||
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~---~----~~~~~~~~~~~-~~----~~~~~Dvvf   69 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK---F----KDQDITIEETT-ET----AFEGVDIAL   69 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE---E----TTEEEEEEECC-TT----TTTTCSEEE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce---e----cCCCceEeeCC-HH----HhcCCCEEE
Confidence            36899999999999999999988765   3444432222111000   0    01112112222 11    246899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVA  130 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~  130 (319)
                      .|++..                  .+...+..+.+.|+ ++|=+|+...
T Consensus        70 ~a~~~~------------------~s~~~a~~~~~~G~-~vIDlSa~~R   99 (366)
T 3pwk_A           70 FSAGSS------------------TSAKYAPYAVKAGV-VVVDNTSYFR   99 (366)
T ss_dssp             ECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTTT
T ss_pred             ECCChH------------------hHHHHHHHHHHCCC-EEEEcCCccc
Confidence            987521                  13446666677887 7888888643

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.06  E-value=0.00023  Score=59.99  Aligned_cols=37  Identities=19%  Similarity=0.154  Sum_probs=32.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      ++++|.|.|+ |.+|+.++..|++.|++|++.+|+++.
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            4578999987 999999999999999999999987653

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.06  E-value=0.002  Score=54.51  Aligned_cols=71  Identities=18%  Similarity=0.185  Sum_probs=52.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++|+|.|+ |.+|+.+++.|...|.+|++.+|+..+.  ....+.     +++.+     +.+++.++++++|+|+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~--~~~~~~-----g~~~~-----~~~~l~~~l~~aDvVi  218 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLL--ARIAEM-----GMEPF-----HISKAAQELRDVDVCI  218 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TSEEE-----EGGGHHHHTTTCSEEE
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHC-----CCeec-----ChhhHHHHhcCCCEEE
Confidence            356899999996 9999999999999999999999876421  122211     23332     2346778889999999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      .+..
T Consensus       219 ~~~p  222 (293)
T 3d4o_A          219 NTIP  222 (293)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9864

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.06  E-value=0.0017  Score=57.28  Aligned_cols=70  Identities=11%  Similarity=0.013  Sum_probs=53.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|+|+|+ |.+|+.+++.+.+.|++|++++.++..... .        -.-..+..|..|.+.+.++++.+|+|..
T Consensus        12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~-~--------~ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCA-Q--------VADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTT-T--------TCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchH-H--------hCCceEecCcCCHHHHHHHHHhCCEeee
Confidence            45789999987 889999999999999999999876542210 0        0113456788999999999988998743

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.05  E-value=0.0014  Score=56.87  Aligned_cols=74  Identities=12%  Similarity=0.052  Sum_probs=49.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC--hhhHHHHh-cCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD--YDSVKSAI-VGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~-~~~d~v   80 (319)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++.  +...++++     +...+ .|..+  .+.+.+.. .++|+|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~--~~~~~~~l-----Ga~~v-i~~~~~~~~~~~~~~~~g~Dvv  221 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE--TIEWTKKM-----GADIV-LNHKESLLNQFKTQGIELVDYV  221 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH--HHHHHHHH-----TCSEE-ECTTSCHHHHHHHHTCCCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHhc-----CCcEE-EECCccHHHHHHHhCCCCccEE
Confidence            4789999999999999999998889999999987654  33333333     12221 23322  12333331 258999


Q ss_pred             EEecc
Q 020924           81 FHIAC   85 (319)
Q Consensus        81 i~~a~   85 (319)
                      |++++
T Consensus       222 ~d~~g  226 (346)
T 3fbg_A          222 FCTFN  226 (346)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99876

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.04  E-value=0.00076  Score=60.62  Aligned_cols=78  Identities=12%  Similarity=0.090  Sum_probs=48.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeE-EE-----EccCCChhhHHHHhcCc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLK-LF-----KADLLDYDSVKSAIVGC   77 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~-~~-----~~Dl~~~~~~~~~~~~~   77 (319)
                      |+|.|.|+ |++|..++..|++.|++|++++|++...  ..+..-..  ..+++. .+     .+.+.-..++.++++++
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v--~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a   79 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKI--EQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA   79 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH--HHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHH--HHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence            58999987 9999999999999999999999886532  22221000  000000 00     01111112456677889


Q ss_pred             ceEEEeccc
Q 020924           78 NGVFHIACP   86 (319)
Q Consensus        78 d~vi~~a~~   86 (319)
                      |+||-+...
T Consensus        80 DvViiaVpt   88 (450)
T 3gg2_A           80 DIIFIAVGT   88 (450)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEEcCC
Confidence            999998754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.04  E-value=0.0058  Score=51.32  Aligned_cols=105  Identities=10%  Similarity=0.069  Sum_probs=65.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCCh----------------hhHH-HHHhhhccCC--CeEEEEcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSD----------------EKNA-RLYELEKASE--NLKLFKAD   63 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~----------------~~~~-~~~~~~~~~~--~~~~~~~D   63 (319)
                      +.++|+|.|+ |.+|+++++.|+..| -++++++++.-+                .+.. ..+.+....+  .++.+..+
T Consensus        35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~  113 (292)
T 3h8v_A           35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN  113 (292)
T ss_dssp             GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred             hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEeccc
Confidence            4578999988 999999999999999 467777765411                0111 1112222223  45556667


Q ss_pred             CCChhhHHHHh-----------cCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           64 LLDYDSVKSAI-----------VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        64 l~~~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +++.+.+...+           +++|+||++..         .        ...-..+-++|.+.++ .+|+.+.
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D---------n--------~~~R~~in~~c~~~~~-Pli~~gv  170 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD---------N--------FEARMTINTACNELGQ-TWMESGV  170 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS---------S--------HHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCc---------c--------hhhhhHHHHHHHHhCC-CEEEeee
Confidence            77656666554           57899998742         1        1112346667777776 6776544

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.04  E-value=0.0007  Score=58.76  Aligned_cols=97  Identities=14%  Similarity=0.145  Sum_probs=58.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEE--cCCChhhHHHHHhhhccC---------CCeEEEEccCCChhhHH
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTA--REPSDEKNARLYELEKAS---------ENLKLFKADLLDYDSVK   71 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~--r~~~~~~~~~~~~~~~~~---------~~~~~~~~Dl~~~~~~~   71 (319)
                      ++++|.|.||||.+|+.+++.|.++. .++.++.  ++.....   +.......         ..+.+  .|+ +.+.  
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~--   74 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKK---YKDAVKWIEQGDIPEEVQDLPI--VST-NYED--   74 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSB---HHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG--
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCC---HHHhcCcccccccccCCceeEE--eeC-CHHH--
Confidence            45799999999999999999998754 5787775  2211111   11110000         01112  222 3332  


Q ss_pred             HHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           72 SAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        72 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                        ++++|+||.+.+..                  .+..++..+.+.|+ ++|-.||..
T Consensus        75 --~~~vDvVf~atp~~------------------~s~~~a~~~~~aG~-~VId~s~~~  111 (350)
T 2ep5_A           75 --HKDVDVVLSALPNE------------------LAESIELELVKNGK-IVVSNASPF  111 (350)
T ss_dssp             --GTTCSEEEECCCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             --hcCCCEEEECCChH------------------HHHHHHHHHHHCCC-EEEECCccc
Confidence              36899999775421                  13457777778887 588877754

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.03  E-value=0.0065  Score=51.65  Aligned_cols=111  Identities=17%  Similarity=0.248  Sum_probs=74.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhc----cCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEK----ASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ||.|+|| |.+|+.++..|+..|. +|.+++++......... ++..    .....++...  .|.    ++++++|+||
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~-dl~~~~~~~~~~~~i~~t--~d~----~a~~~aD~Vi   72 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEAL-DLAHAAAELGVDIRISGS--NSY----EDMRGSDIVL   72 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHH-HHHHHHHHHTCCCCEEEE--SCG----GGGTTCSEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHH-HHHHhhhhcCCCeEEEEC--CCH----HHhCCCCEEE
Confidence            5899999 9999999999988787 69999988764432221 1111    1112222221  122    3578999999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      -.++....... .. ......|+.....+++.+.+.... .+|.+|-
T Consensus        73 ~~ag~~~k~G~-~r-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           73 VTAGIGRKPGM-TR-EQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             ECCSCCCCSSC-CT-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EeCCCCCCCCC-cH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99886543221 22 567889999999999999887543 6666654

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.02  E-value=0.0015  Score=56.76  Aligned_cols=77  Identities=10%  Similarity=-0.006  Sum_probs=48.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEE------ccCC-ChhhHHHHhc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFK------ADLL-DYDSVKSAIV   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------~Dl~-~~~~~~~~~~   75 (319)
                      |++|+|.|.|+ |.+|+.++..|.+.|++|++++|+++.  ...+.+.    .++.+..      ..+. -..++.+++.
T Consensus         2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (359)
T 1bg6_A            2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQR--IKEIQDR----GAIIAEGPGLAGTAHPDLLTSDIGLAVK   74 (359)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHH----TSEEEESSSCCEEECCSEEESCHHHHHT
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHH--HHHHHhc----CCeEEeccccccccccceecCCHHHHHh
Confidence            34579999987 999999999999999999999887543  2222211    0111110      0110 1234556677


Q ss_pred             CcceEEEeccc
Q 020924           76 GCNGVFHIACP   86 (319)
Q Consensus        76 ~~d~vi~~a~~   86 (319)
                      ++|+||-+...
T Consensus        75 ~~D~vi~~v~~   85 (359)
T 1bg6_A           75 DADVILIVVPA   85 (359)
T ss_dssp             TCSEEEECSCG
T ss_pred             cCCEEEEeCCc
Confidence            89999988743

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.01  E-value=0.00071  Score=57.66  Aligned_cols=65  Identities=25%  Similarity=0.308  Sum_probs=46.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +++|.|+|. |.+|+.+++.|++.|++|++.+|++...  ..+.+.     ++..       ..++.++++++|+||-+.
T Consensus         9 ~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~--~~~~~~-----g~~~-------~~~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A            9 EFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKA--AALVAA-----GAHL-------CESVKAALSASPATIFVL   73 (306)
T ss_dssp             SCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHH--HHHHHH-----TCEE-------CSSHHHHHHHSSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHC-----CCee-------cCCHHHHHhcCCEEEEEe
Confidence            578999975 9999999999999999999998876532  222221     2211       134566677789988875

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.01  E-value=0.0074  Score=51.15  Aligned_cols=110  Identities=15%  Similarity=0.098  Sum_probs=72.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChh-hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDE-KNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      .+++|.|+|| |.+|..++..|+.+|.  +|.+++++.... ....+...  ..++++.. .   |   . +.++++|+|
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~--~~~~i~~t-~---d---~-~~l~~aD~V   81 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF--NLPNVEIS-K---D---L-SASAHSKVV   81 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH--TCTTEEEE-S---C---G-GGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh--cCCCeEEe-C---C---H-HHHCCCCEE
Confidence            3578999997 9999999999999998  999999876411 12222222  11244432 2   2   2 347899999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS  127 (319)
                      |-.++...+.  .. -.+....|+.....+++.+.+.... .+|.+|-
T Consensus        82 i~aag~~~pG--~t-R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           82 IFTVNSLGSS--QS-YLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             EECCCC------CC-HHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             EEcCCCCCCC--CC-HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            9999874221  22 2567888999999999999887543 4555554

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.00  E-value=0.0011  Score=57.51  Aligned_cols=73  Identities=14%  Similarity=0.102  Sum_probs=49.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHhc--Cc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAIV--GC   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~   77 (319)
                      .+.+|||+|+ |.+|..+++.+...|+ +|++++|+++  +.....++     ++..+ .|..+.+   .+.++..  ++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~--~~~~~~~~-----Ga~~~-~~~~~~~~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDF--RRELAKKV-----GADYV-INPFEEDVVKEVMDITDGNGV  237 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHH--HHHHHHHH-----TCSEE-ECTTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHh-----CCCEE-ECCCCcCHHHHHHHHcCCCCC
Confidence            4678999999 9999999999888999 9999988754  33333332     12221 3544432   2333332  58


Q ss_pred             ceEEEecc
Q 020924           78 NGVFHIAC   85 (319)
Q Consensus        78 d~vi~~a~   85 (319)
                      |+||++++
T Consensus       238 D~vid~~g  245 (348)
T 2d8a_A          238 DVFLEFSG  245 (348)
T ss_dssp             EEEEECSC
T ss_pred             CEEEECCC
Confidence            99999986

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.99  E-value=0.0012  Score=56.27  Aligned_cols=66  Identities=20%  Similarity=0.186  Sum_probs=47.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .||+|.|.|. |.+|..++..|++.|++|++.+|++...  ..+.+     .++..       ..++.++++++|+||-+
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~--~~l~~-----~g~~~-------~~~~~~~~~~aDvvi~~   84 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKC--DELVE-----HGASV-------CESPAEVIKKCKYTIAM   84 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG--HHHHH-----TTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHH-----CCCeE-------cCCHHHHHHhCCEEEEE
Confidence            4689999976 9999999999999999999999987643  22222     12221       12455566677888876


Q ss_pred             c
Q 020924           84 A   84 (319)
Q Consensus        84 a   84 (319)
                      .
T Consensus        85 v   85 (310)
T 3doj_A           85 L   85 (310)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.98  E-value=0.00059  Score=58.07  Aligned_cols=39  Identities=21%  Similarity=0.262  Sum_probs=31.7

Q ss_pred             CCC--CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            1 MAL--EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         1 m~~--~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |++  ++|+|.|.|. |.+|+.++..|++.|++|++.+|+++
T Consensus         1 M~~~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~   41 (303)
T 3g0o_A            1 MSLTGTDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQ   41 (303)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCCCCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            454  3468999975 99999999999999999999998765

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.97  E-value=0.00055  Score=61.40  Aligned_cols=35  Identities=20%  Similarity=0.276  Sum_probs=31.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |+|.|.| +|++|..++..|++.|++|++++|++..
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~   35 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4799998 5999999999999999999999987653

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.97  E-value=0.0024  Score=57.66  Aligned_cols=37  Identities=22%  Similarity=0.271  Sum_probs=32.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~  264 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQ  264 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHH
Confidence            3578999999999999999988889999999987543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.96  E-value=0.003  Score=53.83  Aligned_cols=68  Identities=13%  Similarity=0.156  Sum_probs=52.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+|+|.|.|. |.||+.+++.|...|++|++.+|++...            ..+....    ...+++++++++|+|+
T Consensus       136 ~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~------------~~~~~~~----~~~~l~ell~~aDiV~  198 (315)
T 3pp8_A          136 TREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSW------------PGVESYV----GREELRAFLNQTRVLI  198 (315)
T ss_dssp             CSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCC------------TTCEEEE----SHHHHHHHHHTCSEEE
T ss_pred             CcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhh------------hhhhhhc----ccCCHHHHHhhCCEEE
Confidence            356899999977 9999999999999999999999876532            1222221    2367888999999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+...
T Consensus       199 l~~Pl  203 (315)
T 3pp8_A          199 NLLPN  203 (315)
T ss_dssp             ECCCC
T ss_pred             EecCC
Confidence            87643

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.96  E-value=0.0018  Score=53.80  Aligned_cols=57  Identities=21%  Similarity=0.155  Sum_probs=47.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++++|.|+++.+|+.++..|+++|..|++..|+..                            .+.+.++++|+||
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~----------------------------~L~~~~~~ADIVI  209 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT----------------------------DLKSHTTKADILI  209 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS----------------------------SHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch----------------------------hHHHhcccCCEEE
Confidence            367899999999999999999999999999998765421                            3567788999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      ...+.
T Consensus       210 ~Avg~  214 (285)
T 3l07_A          210 VAVGK  214 (285)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98874

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.96  E-value=0.0018  Score=54.17  Aligned_cols=59  Identities=15%  Similarity=0.119  Sum_probs=48.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+++++|.|+++.+|+.++..|+++|..|++..|+...                      +    .+.+.++++|+||
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~----------------------l----~l~~~~~~ADIVI  215 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTST----------------------E----DMIDYLRTADIVI  215 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCH----------------------H----HHHHHHHTCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCC----------------------c----hhhhhhccCCEEE
Confidence            3678999999999999999999999999999998764321                      0    0236788999999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      ...+.
T Consensus       216 ~Avg~  220 (300)
T 4a26_A          216 AAMGQ  220 (300)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            98875

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.94  E-value=0.0026  Score=53.23  Aligned_cols=74  Identities=18%  Similarity=0.162  Sum_probs=44.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLS-RDYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|.|.|++|-+|+.+++.+.+ .+.++.++. |+.+........++.+    +.  ..++.-..++++++.++|+||.
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G----~~--~~gv~v~~dl~~ll~~aDVvID   94 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG----SD--FLGVRITDDPESAFSNTEGILD   94 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT----CS--CCSCBCBSCHHHHTTSCSEEEE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc----cC--cCCceeeCCHHHHhcCCCEEEE
Confidence            46899999999999999999875 478877664 4332110000011110    00  0122222356677778999998


Q ss_pred             ec
Q 020924           83 IA   84 (319)
Q Consensus        83 ~a   84 (319)
                      +.
T Consensus        95 FT   96 (288)
T 3ijp_A           95 FS   96 (288)
T ss_dssp             CS
T ss_pred             cC
Confidence            75

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.94  E-value=0.0014  Score=57.19  Aligned_cols=74  Identities=11%  Similarity=0.033  Sum_probs=50.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh-hhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY-DSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vi~   82 (319)
                      .+.+|||+|+ |.+|..+++.+...|.+|+++++++.+.  ..+.++     +...+ .|..+. +..+.+..++|+||+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~--~~~~~l-----Ga~~v-~~~~~~~~~~~~~~~~~D~vid  249 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR--EDAMKM-----GADHY-IATLEEGDWGEKYFDTFDLIVV  249 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH--HHHHHH-----TCSEE-EEGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH--HHHHHc-----CCCEE-EcCcCchHHHHHhhcCCCEEEE
Confidence            3679999999 9999999988888899999999877642  233332     12211 244333 222333347999999


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      +++.
T Consensus       250 ~~g~  253 (360)
T 1piw_A          250 CASS  253 (360)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9875

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.93  E-value=0.0018  Score=56.32  Aligned_cols=76  Identities=12%  Similarity=0.095  Sum_probs=54.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccC------------------C
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL------------------L   65 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------~   65 (319)
                      .+.+|+|+|+ |-+|..+++.|...|.+|++.+|++..  ...+.++     +.+++..|+                  .
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~--l~~~~~l-----Ga~~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEV--AEQVRSV-----GAQWLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGG--HHHHHHT-----TCEECCCC-------------CHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc-----CCeEEeccccccccccchhhhhHHHHhh
Confidence            4579999998 999999999999999999999988763  2233332     233332221                  1


Q ss_pred             ChhhHHHHhcCcceEEEecccC
Q 020924           66 DYDSVKSAIVGCNGVFHIACPA   87 (319)
Q Consensus        66 ~~~~~~~~~~~~d~vi~~a~~~   87 (319)
                      +.+.+.++++++|+||.++...
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCT
T ss_pred             hHHHHHHHHhcCCEEEECCCCC
Confidence            2346778888999999886443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.93  E-value=0.0022  Score=54.99  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=51.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+.+|||+||+|.+|...++.+...|.+|+++.+..   +....+++     ++.. ..|..+.+.+.+.+.++|++|++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~---~~~~~~~l-----Ga~~-~i~~~~~~~~~~~~~g~D~v~d~  222 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR---NHAFLKAL-----GAEQ-CINYHEEDFLLAISTPVDAVIDL  222 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH---HHHHHHHH-----TCSE-EEETTTSCHHHHCCSCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc---hHHHHHHc-----CCCE-EEeCCCcchhhhhccCCCEEEEC
Confidence            467999999999999999999988999999887432   22333332     2221 23554544466666889999999


Q ss_pred             cc
Q 020924           84 AC   85 (319)
Q Consensus        84 a~   85 (319)
                      +|
T Consensus       223 ~g  224 (321)
T 3tqh_A          223 VG  224 (321)
T ss_dssp             SC
T ss_pred             CC
Confidence            86

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.93  E-value=0.0044  Score=54.30  Aligned_cols=74  Identities=12%  Similarity=0.116  Sum_probs=49.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh--cCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI--VGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi   81 (319)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++ ..  +...++++     +...+ .|..+.+..+.+.  .++|++|
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~--~~~~~~~l-----Ga~~v-~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD--ASELVRKL-----GADDV-IDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GG--GHHHHHHT-----TCSEE-EETTSSCHHHHHHTSCCBSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hH--HHHHHHHc-----CCCEE-EECCchHHHHHHhhcCCCCEEE
Confidence            3679999999999999999988889999998873 32  33333333     22221 2444433233332  3689999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      +++|.
T Consensus       254 d~~g~  258 (375)
T 2vn8_A          254 DNVGG  258 (375)
T ss_dssp             ESSCT
T ss_pred             ECCCC
Confidence            99874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.92  E-value=0.0013  Score=56.21  Aligned_cols=69  Identities=17%  Similarity=0.218  Sum_probs=47.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCe-EEEEccCCChhhHHH-HhcCc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENL-KLFKADLLDYDSVKS-AIVGC   77 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~-~~~~~   77 (319)
                      .+..|+|.|+| .|.+|..+++.|.+.|+  +|++.+|++...  ....+.     ++ .....      ++.+ +++++
T Consensus        30 ~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~--~~a~~~-----G~~~~~~~------~~~~~~~~~a   95 (314)
T 3ggo_A           30 SLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI--SKAVDL-----GIIDEGTT------SIAKVEDFSP   95 (314)
T ss_dssp             CCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH--HHHHHT-----TSCSEEES------CTTGGGGGCC
T ss_pred             hcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHH--HHHHHC-----CCcchhcC------CHHHHhhccC
Confidence            34457999998 59999999999999999  999998876432  222221     11 01111      2234 56789


Q ss_pred             ceEEEec
Q 020924           78 NGVFHIA   84 (319)
Q Consensus        78 d~vi~~a   84 (319)
                      |+||-+.
T Consensus        96 DvVilav  102 (314)
T 3ggo_A           96 DFVMLSS  102 (314)
T ss_dssp             SEEEECS
T ss_pred             CEEEEeC
Confidence            9999875

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.92  E-value=0.0036  Score=51.55  Aligned_cols=104  Identities=15%  Similarity=0.169  Sum_probs=63.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh-----------------hhHHH-HHhhhccCCC--eEEEEc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD-----------------EKNAR-LYELEKASEN--LKLFKA   62 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------------~~~~~-~~~~~~~~~~--~~~~~~   62 (319)
                      ++++|+|.|+ |.+|+++++.|+..|. ++++++++.-.                 .+... .+.+....+.  ++.+..
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  105 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ  105 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence            3579999998 7799999999999996 67777554210                 11111 1122222233  344444


Q ss_pred             cCCChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           63 DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ++ +.+.+.+.++++|+||++..         ...        .-..+-++|++.++ .+|+.+.
T Consensus       106 ~~-~~~~~~~~~~~~DvVi~~~d---------~~~--------~r~~l~~~~~~~~~-p~i~~~~  151 (251)
T 1zud_1          106 RL-TGEALKDAVARADVVLDCTD---------NMA--------TRQEINAACVALNT-PLITASA  151 (251)
T ss_dssp             CC-CHHHHHHHHHHCSEEEECCS---------SHH--------HHHHHHHHHHHTTC-CEEEEEE
T ss_pred             cC-CHHHHHHHHhcCCEEEECCC---------CHH--------HHHHHHHHHHHhCC-CEEEEec
Confidence            44 34567778889999999742         111        12346667777775 6777654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.92  E-value=0.0022  Score=56.10  Aligned_cols=74  Identities=14%  Similarity=0.112  Sum_probs=51.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++.+  ....+++     +... ..|..+.+.++++..++|+||++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~--~~~a~~l-----Ga~~-vi~~~~~~~~~~~~~g~Dvvid~  264 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK--REAAKAL-----GADE-VVNSRNADEMAAHLKSFDFILNT  264 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHH-----TCSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc-----CCcE-EeccccHHHHHHhhcCCCEEEEC
Confidence            3678999998 789999998888899999999987653  2333333     1221 13555544444444678999999


Q ss_pred             ccc
Q 020924           84 ACP   86 (319)
Q Consensus        84 a~~   86 (319)
                      ++.
T Consensus       265 ~g~  267 (369)
T 1uuf_A          265 VAA  267 (369)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            874

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.91  E-value=0.0064  Score=52.08  Aligned_cols=34  Identities=21%  Similarity=0.313  Sum_probs=29.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTARE   38 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (319)
                      ++++|+|.|+ |.+|+++++.|+..|. ++++++++
T Consensus        33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            4579999988 9999999999999995 67777764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.89  E-value=0.0019  Score=53.61  Aligned_cols=57  Identities=19%  Similarity=0.071  Sum_probs=47.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++++|.|+++.+|+.++..|+++|..|++..++..                            .+.+.++++|+||
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~----------------------------~L~~~~~~ADIVI  209 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR----------------------------DLADHVSRADLVV  209 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS----------------------------CHHHHHHTCSEEE
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc----------------------------CHHHHhccCCEEE
Confidence            367899999999999999999999999999998765321                            3556778899999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      ..++.
T Consensus       210 ~Avg~  214 (286)
T 4a5o_A          210 VAAGK  214 (286)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98764

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.89  E-value=0.0015  Score=58.69  Aligned_cols=37  Identities=16%  Similarity=0.224  Sum_probs=32.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .+++|||+||+|.||..+++.+...|.+|+++++++.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~  256 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ  256 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            3689999999999999999999899999999987544

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.89  E-value=0.0017  Score=54.98  Aligned_cols=36  Identities=17%  Similarity=0.249  Sum_probs=32.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |++|-++|- |..|+.+++.|++.||+|++.+|++++
T Consensus         3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~   38 (300)
T 3obb_A            3 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSA   38 (300)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             cCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            578999976 999999999999999999999998664

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.88  E-value=0.0012  Score=59.18  Aligned_cols=68  Identities=15%  Similarity=0.084  Sum_probs=47.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .+.+|+|+|||+ |.||+.+++.|...|.+|++.+|++.... ....      ..+     |+.+.   .+++..+|+|+
T Consensus       262 ~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~-~Aa~------~g~-----dv~~l---ee~~~~aDvVi  325 (488)
T 3ond_A          262 MIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICAL-QATM------EGL-----QVLTL---EDVVSEADIFV  325 (488)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHH------TTC-----EECCG---GGTTTTCSEEE
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHH------hCC-----ccCCH---HHHHHhcCEEE
Confidence            467899999998 59999999999999999999887654221 1111      111     33332   34556789888


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      .+.+
T Consensus       326 ~atG  329 (488)
T 3ond_A          326 TTTG  329 (488)
T ss_dssp             ECSS
T ss_pred             eCCC
Confidence            7654

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.88  E-value=0.0026  Score=56.36  Aligned_cols=71  Identities=15%  Similarity=0.171  Sum_probs=54.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |.+++|+|+|+ |.+|+.+++.+.+.|++|++++ .+... ....      ......+.+|..|.+.+.++.+.+|+|+-
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p-~~~~------ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSP-AKQI------SAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCT-TGGG------CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCc-HHHh------ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            34689999998 8999999999999999999999 54322 1111      11124567899999999999999998764

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.86  E-value=0.0052  Score=53.94  Aligned_cols=77  Identities=17%  Similarity=0.153  Sum_probs=54.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEcc----------------CCC-
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD----------------LLD-   66 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~~-   66 (319)
                      .+.+|+|+|+ |-+|...++.+...|.+|++.++++..  ...++.+     +.+++..+                +++ 
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~--l~~~~~~-----G~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAA--KEQVASL-----GAKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTH--HHHHHHT-----TCEECCCCC-----------------CH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHc-----CCceeecccccccccccccchhhhcchh
Confidence            3578999998 999999999999999999999998763  2233322     22332222                222 


Q ss_pred             -----hhhHHHHhcCcceEEEecccCC
Q 020924           67 -----YDSVKSAIVGCNGVFHIACPAP   88 (319)
Q Consensus        67 -----~~~~~~~~~~~d~vi~~a~~~~   88 (319)
                           .+.+.++++++|+||.++....
T Consensus       261 ~~~~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          261 YQVKQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hhhhhHhHHHHHhcCCCEEEECCcCCC
Confidence                 2477888899999999876443

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.85  E-value=0.0018  Score=56.14  Aligned_cols=69  Identities=22%  Similarity=0.170  Sum_probs=48.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++++  ...++++     +...+.   .+.+.+.+   ++|+||++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~--~~~~~~l-----Ga~~v~---~~~~~~~~---~~D~vid~  241 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHK--KQDALSM-----GVKHFY---TDPKQCKE---ELDFIIST  241 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTT--HHHHHHT-----TCSEEE---SSGGGCCS---CEEEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHH--HHHHHhc-----CCCeec---CCHHHHhc---CCCEEEEC
Confidence            4679999997 999999998888899999999988764  3333333     222222   33333322   89999999


Q ss_pred             ccc
Q 020924           84 ACP   86 (319)
Q Consensus        84 a~~   86 (319)
                      ++.
T Consensus       242 ~g~  244 (348)
T 3two_A          242 IPT  244 (348)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.85  E-value=0.0039  Score=54.86  Aligned_cols=74  Identities=18%  Similarity=0.122  Sum_probs=51.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC------------------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL------------------   65 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------------   65 (319)
                      .+++|+|+|+ |-+|..+++.+...|.+|++.+|++...  .....+     +.+++..|..                  
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~--~~~~~~-----Ga~~~~i~~~~~~~~~~~~~~~~~~s~~  242 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK--EQVESL-----GGKFITVDDEAMKTAETAGGYAKEMGEE  242 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH--HHHHHT-----TCEECCC---------------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHc-----CCeEEeecccccccccccccchhhcCHH
Confidence            5789999996 9999999999999999999999887632  222222     2222211211                  


Q ss_pred             ----ChhhHHHHhcCcceEEEecc
Q 020924           66 ----DYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus        66 ----~~~~~~~~~~~~d~vi~~a~   85 (319)
                          +.+.+.+.+.++|+||+++.
T Consensus       243 ~~~~~~~~l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          243 FRKKQAEAVLKELVKTDIAITTAL  266 (384)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCC
T ss_pred             HHhhhHHHHHHHhCCCCEEEECCc
Confidence                12337777889999999873

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.85  E-value=0.0018  Score=53.18  Aligned_cols=38  Identities=18%  Similarity=0.220  Sum_probs=32.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      +.+++|.|+| +|.+|+++++.|++.|++|++.+|+++.
T Consensus        17 ~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           17 FQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            4568999997 5999999999999999999999998653

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.85  E-value=0.0058  Score=50.69  Aligned_cols=67  Identities=13%  Similarity=0.009  Sum_probs=48.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +++++|+|+ |..|++++..|.+.|.+|++.+|+.++.....  ++     +++..  ++.+.       .++|+||++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la--~~-----~~~~~--~~~~l-------~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ--RL-----GCDCF--MEPPK-------SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH--HH-----TCEEE--SSCCS-------SCCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HC-----CCeEe--cHHHh-------ccCCEEEEcc
Confidence            579999997 99999999999999999999999987543222  22     12332  22221       2789999987


Q ss_pred             ccCC
Q 020924           85 CPAP   88 (319)
Q Consensus        85 ~~~~   88 (319)
                      ....
T Consensus       181 p~Gm  184 (269)
T 3phh_A          181 SASL  184 (269)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            5443

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.84  E-value=0.0033  Score=55.17  Aligned_cols=68  Identities=12%  Similarity=0.205  Sum_probs=52.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      ||+|+|+|+ |.+|+.+++.|.+.|++|++++.++..... .   +     .-.++..|..|.+.+.+++.++|.|+.
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~-~---~-----~~~~~~~~~~d~~~l~~~~~~~d~v~~   68 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG-Q---V-----ADEQIVAGFFDSERIEDLVKGSDVTTY   68 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG-G---G-----SSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh-h---h-----CceEEECCCCCHHHHHHHHhcCCEEEe
Confidence            468999998 799999999999999999999875442110 0   1     113566889999999888888998875

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.82  E-value=0.0018  Score=56.35  Aligned_cols=37  Identities=11%  Similarity=0.039  Sum_probs=32.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |++|+|.|+|. |.+|+.+++.|++.|++|++.+|++.
T Consensus        20 m~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~   56 (358)
T 4e21_A           20 FQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVN   56 (358)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             hcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence            34589999985 99999999999999999999998765

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.80  E-value=0.0021  Score=53.07  Aligned_cols=56  Identities=14%  Similarity=0.145  Sum_probs=46.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++++|.|+++.+|+.++..|+++|..|++..++.                            ..+.+.++++|+||.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t----------------------------~~L~~~~~~ADIVI~  199 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT----------------------------KDIGSMTRSSKIVVV  199 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHHHSSEEEE
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------------ccHHHhhccCCEEEE
Confidence            4689999999999999999999999999999886532                            235567788899999


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      ..+.
T Consensus       200 Avg~  203 (276)
T 3ngx_A          200 AVGR  203 (276)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            8865

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.80  E-value=0.0012  Score=55.84  Aligned_cols=64  Identities=14%  Similarity=0.016  Sum_probs=46.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +|+|.|.|. |.+|..+++.|++.|++|++.+|+++...  .+.+     .+++.       ..++.++++ +|+||-+.
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~--~~~~-----~g~~~-------~~~~~~~~~-aDvvi~~v   78 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMT--PLAE-----AGATL-------ADSVADVAA-ADLIHITV   78 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSH--HHHH-----TTCEE-------CSSHHHHTT-SSEEEECC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHH--HHHH-----CCCEE-------cCCHHHHHh-CCEEEEEC
Confidence            358999975 99999999999999999999999877432  2221     12222       234566677 89998875

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.79  E-value=0.0022  Score=53.85  Aligned_cols=68  Identities=15%  Similarity=0.158  Sum_probs=48.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC---eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY---FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |++|+|.|+|+ |.+|+.++..|++.|+   +|++.+|++..  ...+.+.    .++..       ..+..++++++|+
T Consensus         1 M~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~--~~~l~~~----~gi~~-------~~~~~~~~~~aDv   66 (280)
T 3tri_A            1 MNTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDK--LDFFKEK----CGVHT-------TQDNRQGALNADV   66 (280)
T ss_dssp             -CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHH--HHHHHHT----TCCEE-------ESCHHHHHSSCSE
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHH--HHHHHHH----cCCEE-------eCChHHHHhcCCe
Confidence            34578999988 9999999999999998   89999988763  2222221    12332       1234566788999


Q ss_pred             EEEec
Q 020924           80 VFHIA   84 (319)
Q Consensus        80 vi~~a   84 (319)
                      ||-+.
T Consensus        67 Vilav   71 (280)
T 3tri_A           67 VVLAV   71 (280)
T ss_dssp             EEECS
T ss_pred             EEEEe
Confidence            99876

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.79  E-value=0.002  Score=54.20  Aligned_cols=64  Identities=17%  Similarity=0.198  Sum_probs=46.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |+|.|.|. |.+|+.++..|++.|++|++.+|+++..  ..+.+     .++..       ..++.++++++|+||-+.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~--~~~~~-----~g~~~-------~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKA--EELAA-----LGAER-------AATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG--HHHHH-----TTCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHH--HHHHH-----CCCee-------cCCHHHHHhcCCEEEEEc
Confidence            68999986 9999999999999999999999887643  22222     12221       134556667788888765

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.78  E-value=0.0029  Score=55.13  Aligned_cols=74  Identities=12%  Similarity=-0.007  Sum_probs=52.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHH-hhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLY-ELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++++  ..... ++     +...+ .|..+.+.+.++..++|+||+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~--~~~~~~~l-----Ga~~v-i~~~~~~~~~~~~~g~D~vid  250 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKK--REEALQDL-----GADDY-VIGSDQAKMSELADSLDYVID  250 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTH--HHHHHTTS-----CCSCE-EETTCHHHHHHSTTTEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHc-----CCcee-eccccHHHHHHhcCCCCEEEE
Confidence            4679999996 999999998888889999999987663  22222 22     12111 244555556665567999999


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      ++|.
T Consensus       251 ~~g~  254 (357)
T 2cf5_A          251 TVPV  254 (357)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9874

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.78  E-value=0.0039  Score=54.32  Aligned_cols=69  Identities=10%  Similarity=0.138  Sum_probs=50.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC-ChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL-DYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vi~~   83 (319)
                      ||+|+|+|| |..|..++..+.+.|++|++++.++..... .   +     --+++..|.. |.+.+....+++|+|+-.
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~-~---~-----aD~~~~~~~~~d~~~~~~~~~~~D~v~~~   70 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIR-N---Y-----ADEFYCFDVIKEPEKLLELSKRVDAVLPV   70 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTT-T---T-----SSEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhH-h---h-----CCEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence            689999997 899999999999999999999877653211 0   0     1145556654 566666777789988753

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.77  E-value=0.005  Score=54.20  Aligned_cols=73  Identities=15%  Similarity=0.087  Sum_probs=54.2

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--Ccc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCN   78 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   78 (319)
                      |+.++|+|||+|+ |.+|..+++.+.+.|++|++++..+..... .   .     .-+.+..|..|.+.+.++++  ++|
T Consensus         7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-~---~-----~d~~~~~~~~d~~~l~~~~~~~~~d   76 (391)
T 1kjq_A            7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-H---V-----AHRSHVINMLDGDALRRVVELEKPH   76 (391)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-G---G-----SSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-h---h-----ccceEECCCCCHHHHHHHHHHcCCC
Confidence            4445689999988 789999999999999999999876543211 0   0     11456678888888888775  789


Q ss_pred             eEEEe
Q 020924           79 GVFHI   83 (319)
Q Consensus        79 ~vi~~   83 (319)
                      .|+..
T Consensus        77 ~v~~~   81 (391)
T 1kjq_A           77 YIVPE   81 (391)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            88863

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.76  E-value=0.0017  Score=55.63  Aligned_cols=66  Identities=15%  Similarity=0.191  Sum_probs=48.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++|+|.|+|. |.+|+.+++.|++.|++|++.+|+++.  ...+.+     .++..       ..++.++++++|+||-+
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~--~~~l~~-----~g~~~-------~~~~~e~~~~aDvVi~~   94 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPAR--AASLAA-----LGATI-------HEQARAAARDADIVVSM   94 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHH--HHHHHT-----TTCEE-------ESSHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHH--HHHHHH-----CCCEe-------eCCHHHHHhcCCEEEEE
Confidence            4579999976 999999999999999999999987653  222221     12222       23466677889999887


Q ss_pred             c
Q 020924           84 A   84 (319)
Q Consensus        84 a   84 (319)
                      .
T Consensus        95 v   95 (320)
T 4dll_A           95 L   95 (320)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.75  E-value=0.001  Score=56.04  Aligned_cols=65  Identities=17%  Similarity=0.181  Sum_probs=45.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      ||+|.|.|. |.+|+.++..|++.|++|++.+|+++..  ..+.+.     ++..       ..+..++++++|+||-+.
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~--~~~~~~-----g~~~-------~~~~~~~~~~advvi~~v   65 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKC--APLVAL-----GARQ-------ASSPAEVCAACDITIAML   65 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGG--HHHHHH-----TCEE-------CSCHHHHHHHCSEEEECC
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHH--HHHHHC-----CCee-------cCCHHHHHHcCCEEEEEc
Confidence            368999974 9999999999999999999999987643  222211     2221       123555666778888765

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=96.74  E-value=0.007  Score=54.10  Aligned_cols=71  Identities=11%  Similarity=0.123  Sum_probs=53.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      .+|+|||+|+ |.+|..+++.+.+.|++|++++..+.... ...        --+.+..|..|.+.+.++++  ++|.|+
T Consensus        18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~-~~~--------ad~~~~~~~~d~~~l~~~~~~~~~d~V~   87 (433)
T 2dwc_A           18 SAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPA-MQV--------AHRSYVGNMMDKDFLWSVVEREKPDAII   87 (433)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHH-HHH--------SSEEEESCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh-hhh--------cceEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            4579999988 78999999999999999999987655321 111        11456678888888888775  789888


Q ss_pred             Eec
Q 020924           82 HIA   84 (319)
Q Consensus        82 ~~a   84 (319)
                      ...
T Consensus        88 ~~~   90 (433)
T 2dwc_A           88 PEI   90 (433)
T ss_dssp             ECS
T ss_pred             ECc
Confidence            744

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.73  E-value=0.0078  Score=52.41  Aligned_cols=95  Identities=13%  Similarity=0.037  Sum_probs=55.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHH-HHCCC---eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLL-LSRDY---FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L-~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++|.|.||||++|+.++++| .++++   .++.+..+.. .+  .+..+.    +......|..+.+.    ++++|+|
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~-G~--~v~~~~----g~~i~~~~~~~~~~----~~~~DvV   69 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL-GQ--AAPSFG----GTTGTLQDAFDLEA----LKALDII   69 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST-TS--BCCGGG----TCCCBCEETTCHHH----HHTCSEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCC-CC--CccccC----CCceEEEecCChHH----hcCCCEE
Confidence            368999999999999999954 44543   4555554321 11  000010    11122223334433    3589999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSG  128 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~  128 (319)
                      |.|.+.                  ..+..+...+.+.|++ .+|=.||.
T Consensus        70 f~a~g~------------------~~s~~~a~~~~~~G~k~vVID~ss~  100 (367)
T 1t4b_A           70 VTCQGG------------------DYTNEIYPKLRESGWQGYWIDAASS  100 (367)
T ss_dssp             EECSCH------------------HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             EECCCc------------------hhHHHHHHHHHHCCCCEEEEcCChh
Confidence            998752                  1134566677788874 56666664

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.72  E-value=0.0012  Score=55.21  Aligned_cols=68  Identities=18%  Similarity=0.289  Sum_probs=48.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .++++++|+|+ |..|++++..|.+.|. +|++++|+.++  ...+.      ..+..+     ..+++.+ + ++|+||
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~k--a~~La------~~~~~~-----~~~~l~~-l-~~DivI  183 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEK--TSEIY------GEFKVI-----SYDELSN-L-KGDVII  183 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHH--HHHHC------TTSEEE-----EHHHHTT-C-CCSEEE
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH--HHHHH------HhcCcc-----cHHHHHh-c-cCCEEE
Confidence            46789999998 7899999999999998 89999998653  22222      122222     1233334 4 899999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      ++...
T Consensus       184 naTp~  188 (282)
T 3fbt_A          184 NCTPK  188 (282)
T ss_dssp             ECSST
T ss_pred             ECCcc
Confidence            98754

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.72  E-value=0.0036  Score=54.65  Aligned_cols=72  Identities=21%  Similarity=0.169  Sum_probs=48.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh----hhHHHHhc--Cc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY----DSVKSAIV--GC   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~--~~   77 (319)
                      .+.+|||+| +|.+|...++.+...|.+|++++++++  +....+++     ++..+ .| .+.    +.+.+...  ++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~--~~~~~~~l-----Ga~~v-i~-~~~~~~~~~v~~~~~g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSRE--KLDRAFAL-----GADHG-IN-RLEEDWVERVYALTGDRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHH--HHHHHHHH-----TCSEE-EE-TTTSCHHHHHHHHHTTCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCch--hHHHHHHc-----CCCEE-Ec-CCcccHHHHHHHHhCCCCc
Confidence            357999999 799999999888889999999998754  33333333     22222 23 332    23333333  68


Q ss_pred             ceEEEecc
Q 020924           78 NGVFHIAC   85 (319)
Q Consensus        78 d~vi~~a~   85 (319)
                      |+||+++|
T Consensus       259 D~vid~~g  266 (363)
T 3uog_A          259 DHILEIAG  266 (363)
T ss_dssp             EEEEEETT
T ss_pred             eEEEECCC
Confidence            99999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-41
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-36
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-33
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-30
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	6e-27
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-26
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-25
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	7e-24
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-23
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-22
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-22
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-22
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	7e-21
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-20
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	5e-17
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	7e-17
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-15
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-15
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-14
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-14
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-12
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-11
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-11
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-10
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-10
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-09
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-09
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-09
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-08
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	3e-08
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-08
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-08
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-08
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	6e-08
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	9e-08
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-07
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-07
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	8e-07
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-06
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-06
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	9e-06
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-05
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-05
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-05
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	4e-05
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	0.004

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  144 bits (362), Expect = 4e-41
 Identities = 88/335 (26%), Positives = 140/335 (41%), Gaps = 28/335 (8%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN-ARLYELEKASENLKLFKA 62
           E   V VTGA GF+AS VV+ LL   Y V GTAR  S   N  + ++ +           
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKAC-LEAKVKR 121
           D+L   +    I G  GV HIA     +   +  +    PA+ GTLN ++A      VKR
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVV---TPAIGGTLNALRAAAATPSVKR 126

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT----------TNNWYCLSKTEAESE 171
            ++ SS V+  +     +G  +DE  W+ +   +           +   Y  SKTEAE  
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186

Query: 172 ALEFGKKTGL--DVVTICPNLVLGPLLQSKVNT-SSLVLIKLLKEGYESLENKL---RMI 225
           A +F  +      +  + PN  +G +   +  + S+   +  L  G  S    L   +  
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246

Query: 226 VDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEV 284
           V   D+    L      + E R    TA       ++   + LYP+  +P  F ++  ++
Sbjct: 247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL 306

Query: 285 M-----LTSEKLQKLGWS-YRSLEETLVDSVESYK 313
                  + E L+ LG   +RS+EE++ D V S  
Sbjct: 307 SKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (329), Expect = 2e-36
 Identities = 59/321 (18%), Positives = 116/321 (36%), Gaps = 26/321 (8%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL 64
           ++R+ +TG  GF+ S +   L+   + V       +  K             +     +L
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK-------RNVEHWIGHENFEL 53

Query: 65  LDYDSVKSAIVGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
           +++D V+   +  + ++H+A PA P   + NP ++ L+    GTLN++        + ++
Sbjct: 54  INHDVVEPLYIEVDQIYHLASPASPPNYMYNP-IKTLKTNTIGTLNMLGLAKRVGARLLL 112

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
             +S V        P+     E  W            Y   K  AE+    + K+ G++V
Sbjct: 113 ASTSEVYGD-----PEVHPQSEDYWGHVNPIG-PRACYDEGKRVAETMCYAYMKQEGVEV 166

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEG-----YESLENKLRMIVDVRDVAEALLLA 238
                    GP +           I    +G     Y S     R    V D+   L+  
Sbjct: 167 RVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT-RAFQYVSDLVNGLVAL 225

Query: 239 YEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLT---SEKLQK-L 294
                +    +         +    +K+L  + +  +  +E +D+        +K +  L
Sbjct: 226 MNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML 285

Query: 295 GWSYR-SLEETLVDSVESYKK 314
           GW     LEE L  ++  ++K
Sbjct: 286 GWEPVVPLEEGLNKAIHYFRK 306

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  123 bits (310), Expect = 1e-33
 Identities = 66/323 (20%), Positives = 116/323 (35%), Gaps = 26/323 (8%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAR-----EPSDEKNARLYELEKASENLKLFK 61
           R+ VTG  GF+ S  V+ LL+  Y              +   N        A   L+   
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 62  ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR 121
            D+ D   +   + G + + H A  +             E  V+GT  +++  ++A V R
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGL 181
           V+ VS+    G            E+   +       N+ Y  SK  ++  A  + +  GL
Sbjct: 122 VVHVSTNQVYGSIDSGS----WTESSPLE------PNSPYAASKAGSDLVARAYHRTYGL 171

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD---VRDVAEALLLA 238
           DV         GP  Q       L +  LL  G   L      + +     D    + L 
Sbjct: 172 DVRITRCCNNYGP-YQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALV 230

Query: 239 YEKAEAEGRY-ICTAHMIRARDLVDK-LKSLYPNYNYPKSFTEKEDEVM---LTSEKLQK 293
                A   Y I     +  R+L    L SL  +++  +   +++   +   L   K+++
Sbjct: 231 LAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIER 290

Query: 294 -LGWSYR-SLEETLVDSVESYKK 314
            LG+  + S  + L  +V  Y++
Sbjct: 291 ELGYRPQVSFADGLARTVRWYRE 313

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  116 bits (290), Expect = 2e-30
 Identities = 56/339 (16%), Positives = 113/339 (33%), Gaps = 35/339 (10%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
           ++ +TG  GF+ S VV+ ++      V    +         L ++ + S       AD+ 
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE-SNRYNFEHADIC 60

Query: 66  DYDSVKSAI--VGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLE------ 116
           D   +         + V H+A  +    ++  P    +E  + GT  +++   +      
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGP-AAFIETNIVGTYALLEVARKYWSALG 119

Query: 117 ---AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEAL 173
                  R   +S+    G  P   + +         +      ++ Y  SK  ++    
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 174 EFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG----YESLENKLRMIVDVR 229
            + +  GL  +    +   GP          LV++  L+      Y   +   R  + V 
Sbjct: 180 AWRRTYGLPTIVTNCSNNYGP-YHFPEKLIPLVILNALEGKPLPIYGKGDQI-RDWLYVE 237

Query: 230 DVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLT-- 287
           D A AL +   + +A   Y    H  +    V        +   PK+ + +E    +   
Sbjct: 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADR 297

Query: 288 ----------SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
                     + K+ + LGW    + E  +  +VE Y  
Sbjct: 298 PGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  106 bits (265), Expect = 6e-27
 Identities = 56/360 (15%), Positives = 110/360 (30%), Gaps = 63/360 (17%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK----ASENLKLFKA 62
              +TG  G   S++ + LL + Y VHG  R  S     R+  + +     +    L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 63  DLLDYDSVKSAIVGCN---GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
           DL D  ++   +            A    + +  +P+    +    GTL +++A     +
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLGL 121

Query: 120 K---RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFG 176
           +   R    S+    GL    P      ET            + Y ++K  A    + + 
Sbjct: 122 EKKTRFYQASTSELYGLVQEIP----QKETTPFY------PRSPYAVAKLYAYWITVNYR 171

Query: 177 KKTGLDVVTICPNLVLGPLLQSKVNTSSL-VLIKLLKEGYESLE-----NKLRMIVDVRD 230
           +  G+            P       T  +   I  + +G ES       + LR     +D
Sbjct: 172 ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231

Query: 231 VAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLT--- 287
             +   +  ++ + E   I T      R  V+   +        +    +E  ++++   
Sbjct: 232 YVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTG 291

Query: 288 -------------------------------SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
                                            K  + LGW    +L E + + V +  +
Sbjct: 292 HDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE 351

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  104 bits (259), Expect = 2e-26
 Identities = 52/338 (15%), Positives = 104/338 (30%), Gaps = 54/338 (15%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL 64
           K+RV + G  G + S + + L  R                                + +L
Sbjct: 2   KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT---------------------RDELNL 40

Query: 65  LDYDSVKSAIVG--CNGVFHIACPAPSTTVPNPQM-ELLEPAVKGTLNVVKACLEAKVKR 121
           LD  +V         + V+  A         N    + +   +    N++ A  +  V +
Sbjct: 41  LDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNK 100

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGL 181
           ++ + S        + P    M E+          TN  Y ++K         + ++ G 
Sbjct: 101 LLFLGSSCIYPKLAKQP----MAESELLQ-GTLEPTNEPYAIAKIAGIKLCESYNRQYGR 155

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK-----------LRMIVDVRD 230
           D  ++ P  + GP      + S ++   L +    + +             +R  + V D
Sbjct: 156 DYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD 215

Query: 231 VAEALLL----------AYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEK 280
           +A A +              +       + T      R+L   +  +            K
Sbjct: 216 MAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK 275

Query: 281 EDEVM---LTSEKLQKLGWSYR-SLEETLVDSVESYKK 314
            D      L   +L +LGW +  SLE  L  + + + +
Sbjct: 276 PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLE 313

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  102 bits (254), Expect = 1e-25
 Identities = 59/325 (18%), Positives = 117/325 (36%), Gaps = 27/325 (8%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
              VTG  G   +++ KLLL + Y VHG     S +   RL EL     +++    D+ D
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI-EGDIQYEDGDMAD 60

Query: 67  YDSVKSAIVGCNG--VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
             SV+ A++      V+++A  +      N  +        G  ++++A  +   +    
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVV 184
            +S   +    +       DE             + Y ++K       + + +  GL   
Sbjct: 121 QASTSEMFGLIQAE---RQDENTPFYP------RSPYGVAKLYGHWITVNYRESFGLHAS 171

Query: 185 TICPNLVLGPLLQSKVNTSSLV--LIKLLKEGYESLE----NKLRMIVDVRDVAEALLLA 238
           +        PL   +  T  +   + ++     + L     +  R      D  EA+ L 
Sbjct: 172 SGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM 231

Query: 239 YEKAEAEGRYICTAH----MIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLT---SEKL 291
            ++ +A+   + T          +   + +   Y ++        +  EV +      K 
Sbjct: 232 LQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKA 291

Query: 292 QK-LGWSYR-SLEETLVDSVESYKK 314
           Q+ LGW  R SL+E +   VE+  +
Sbjct: 292 QRVLGWKPRTSLDELIRMMVEADLR 316

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 98.1 bits (243), Expect = 7e-24
 Identities = 48/324 (14%), Positives = 109/324 (33%), Gaps = 24/324 (7%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
           E  ++ +TGAGGF+AS + + L    ++V  +          +   + +     +    D
Sbjct: 14  ENLKISITGAGGFIASHIARRLKHEGHYVIAS-------DWKKNEHMTEDMFCDEFHLVD 66

Query: 64  LLDYDSVKSAIVGCNGVFHIACP-APSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
           L   ++      G + VF++A        + +    ++      + N+++A     +KR 
Sbjct: 67  LRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRF 126

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
              SS         + + +  + +      +     + + L K   E     + K  G++
Sbjct: 127 FYASSACIYP---EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIE 183

Query: 183 VVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK-------LRMIVDVRDVAEAL 235
                 + + GP    K            K    +   +        R    + +  E +
Sbjct: 184 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV 243

Query: 236 LLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLT---SEKLQ 292
           L   +    E   I +  M+   ++ + + S       P       + V      +  ++
Sbjct: 244 LRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFE-EKKLPIHHIPGPEGVRGRNSDNNLIK 302

Query: 293 K-LGWSYR-SLEETLVDSVESYKK 314
           + LGW+    L+E L  +    K+
Sbjct: 303 EKLGWAPNMRLKEGLRITYFWIKE 326

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.2 bits (238), Expect = 3e-23
 Identities = 59/352 (16%), Positives = 97/352 (27%), Gaps = 52/352 (14%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-----SENLKL 59
           +    +TG  G   S++ + LL + Y VHG  R  S     R+  L K        N+KL
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 60

Query: 60  FKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVP--NPQMELLEPAVKGTLNVVKACLEA 117
              DL D   +   I            A S      +      +    GTL ++ A    
Sbjct: 61  HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 120

Query: 118 KV---KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALE 174
            +    +    S+    G     P      ET            + Y  +K  A    + 
Sbjct: 121 GLINSVKFYQASTSELYGKVQEIP----QKETTPFY------PRSPYGAAKLYAYWIVVN 170

Query: 175 FGKKTGLDVVTICPNLVLGPLLQSK-VNTSSLVLIKLLKEGYESLE-----NKLRMIVDV 228
           F +   L  V         P   +  V       +  +  G          +  R     
Sbjct: 171 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 230

Query: 229 RDVAEALLLAYEKAEAEGRYIC--------TAHMIRARDLVDKLKSLYPNYNYPKSFTEK 280
           +D  EA+ L  +  E E   I                  +   +     N N      E 
Sbjct: 231 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKET 290

Query: 281 EDEVMLT----------------SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
               +                    K ++ L W  R + +E + + V +  +
Sbjct: 291 GKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE 342

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 94.3 bits (233), Expect = 1e-22
 Identities = 55/334 (16%), Positives = 101/334 (30%), Gaps = 30/334 (8%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV VTG  G++ S     LL   + V       + +++          ++    + D+ +
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 67  YDSVKSAI--VGCNGVFHIACPA-PSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
              +   +     + V H A       +V  P +E  +  V GTL ++ A   A VK   
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKP-LEYYDNNVNGTLRLISAMRAANVKN-F 119

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGL-- 181
           + SS   V  +           T      Y ++      +       +A        L  
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT--DLQKAQPDWSIALLRY 177

Query: 182 -DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE--NKLRMIVD---VRDVAEAL 235
            + V   P+  +G   Q   N     + ++     +SL          D   VRD    +
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237

Query: 236 LLAY----------EKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVM 285
            LA            K       +         D+V+                 +E ++ 
Sbjct: 238 DLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLP 297

Query: 286 LT---SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
                + K  + L W    +L+E   D+     +
Sbjct: 298 AYWADASKADRELNWRVTRTLDEMAQDTWHWQSR 331

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 93.6 bits (231), Expect = 2e-22
 Identities = 57/339 (16%), Positives = 115/339 (33%), Gaps = 32/339 (9%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ +TG  GFL S +    LS+   +              L+ L     N +    D+ +
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRN 60

Query: 67  YDSVKSAIVGCN--GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
            + V   I        FH+A     TT  +      E  V GTLN+++A  +      I+
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 125 VSSGVAVG-------LNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK 177
            SS   V         N    +   +D+    D+      ++ Y  SK  A+   L++ +
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 178 KTGLDVVTICPNLVLG-----PLLQSKVNTSSLVLIKLLKEGYESLE-----NKLRMIVD 227
             GL+ V    + + G        Q  V       +++     +         ++R ++ 
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240

Query: 228 VRDVAEALLLAYEKA-----EAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTE-KE 281
             D+      A          A        + +   +L   L+  Y N +   +    +E
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLED-YCNIDMRFTNLPVRE 299

Query: 282 DEVMLT---SEKLQK-LGWSYR-SLEETLVDSVESYKKV 315
            +  +     +K+   + WS + S ++ +    +    +
Sbjct: 300 SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI 338

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 93.1 bits (230), Expect = 3e-22
 Identities = 44/319 (13%), Positives = 100/319 (31%), Gaps = 11/319 (3%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
            + VTG  GF+ S  V  + +    VH T  +       +        + ++L   D+ D
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
            + V       + + H A  + +    N     +     GT  +++A  +  ++   V +
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTT-NNWYCLSKTEAESEALEFGKKTGLDVVT 185
             V   L  R       +              ++ Y  +K  ++     + +  G+    
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATI 183

Query: 186 ICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVRDVAEALLLAYEKAE 243
              +   GP    +      +   L     +       +R  +   D +  +     K  
Sbjct: 184 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR 243

Query: 244 A-EGRYICTAHMIRARDLVDKLKSLYPNYNYPKSF-TEKEDEVMLT---SEKLQK-LGW- 296
             E   I        +++++ +              T++    +     + KL+  LGW 
Sbjct: 244 MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWT 303

Query: 297 -SYRSLEETLVDSVESYKK 314
             +    E L ++++ Y  
Sbjct: 304 PQFTDFSEGLEETIQWYTD 322

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 89.2 bits (220), Expect = 7e-21
 Identities = 60/338 (17%), Positives = 113/338 (33%), Gaps = 35/338 (10%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHG----TAREPSDEKNARLYELEKASEN 56
           +  + +   +TG  GF+ S +++ LL  D  V G          +    R    EK   N
Sbjct: 12  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71

Query: 57  LKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE 116
            K  + D+ + D   +A  G + V H A         N  +      + G LN++ A  +
Sbjct: 72  FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131

Query: 117 AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFG 176
           AKV+     +S    G +P  P      E             + Y ++K   E  A  F 
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLP----KVEDTIGK------PLSPYAVTKYVNELYADVFS 181

Query: 177 KKTGLDVVTICPNLVLGPLLQSKVNTSSLV--LIKLLKEG-----YESLENKLRMIVDVR 229
           +  G   + +    V G         ++++      + +G         E   R    + 
Sbjct: 182 RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS-RDFCYIE 240

Query: 230 DVAEA---LLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYP----NYNYPKSFTE-KE 281
           +  +A      A   A  +   I          L   L+        +Y+    + + +E
Sbjct: 241 NTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFRE 300

Query: 282 DEVMLT---SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
            +V  +     K  K LG++ +  +   +  ++  Y  
Sbjct: 301 GDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 87.8 bits (216), Expect = 3e-20
 Identities = 56/332 (16%), Positives = 107/332 (32%), Gaps = 28/332 (8%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL-----EKASENLKL 59
           ++   +TG  G   S++ + LL + Y VHG  R  S+    R+  +           +KL
Sbjct: 1   RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60

Query: 60  FKADLLDYDSVKSAI--VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA 117
             ADL D  S++  I  +  + V+++A  +             +    G L +++A    
Sbjct: 61  HYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 120

Query: 118 KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK 177
            +     V    A              ET            + Y  SK  A    + + +
Sbjct: 121 TIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFH------PRSPYAASKCAAHWYTVNYRE 174

Query: 178 KTGLDVVTICPNLVLGPLLQSKVNTSSLV------LIKLLKEGYESLENKLRMIVDVRDV 231
             GL            P       T  +        + L  + +       R      D 
Sbjct: 175 AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 234

Query: 232 AEALLLAYEKAEAEGRYICTAHMIRARDLVD-KLKSLYPNYNYPKSFTEKED---EVMLT 287
            EA+ L  ++ + +   + T       + +D     L  N+       ++     EV   
Sbjct: 235 VEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNL 294

Query: 288 ---SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
              + K ++ LGW  +   E+ +   V+   +
Sbjct: 295 QGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE 326

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.6 bits (192), Expect = 5e-17
 Identities = 46/338 (13%), Positives = 102/338 (30%), Gaps = 32/338 (9%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY 67
           V VTG  G++ S  V  L+   Y         +   ++          ++  ++ DL D 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 68  DSVKSAI--VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV 125
             ++        + V H A            +      + GT+ +++   +  V + +  
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 123

Query: 126 SSGVAVGLNPRWPKGQIMDETCWSDK--EYCRT--TNNWYCLSKTEAESEALEFGKKTGL 181
           SS    G   R+P    + E C       Y  T             ++ ++ +F      
Sbjct: 124 SSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYF 183

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE-----NKLRMIVDVRDVAEALL 236
           + +   P+ ++G       N     + ++     E L         R    +RD    + 
Sbjct: 184 NPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVD 243

Query: 237 LAYEKAEAEGRY--------------ICTAHMIRARDLVDKLKSLYPNYNYPKSFTE-KE 281
           LA     A                  + +       ++           + P   T  + 
Sbjct: 244 LAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS-GIDLPYKVTGRRA 302

Query: 282 DEVMLT---SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
            +V+      ++ ++ L W     +E++  D  +   +
Sbjct: 303 GDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 340

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (185), Expect = 7e-17
 Identities = 35/253 (13%), Positives = 72/253 (28%), Gaps = 50/253 (19%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           MA++K  + + GA G      +   +   Y V    R+ S   +              + 
Sbjct: 1   MAVKK--IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-------PAHVV 51

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
             D+L    V   + G + V  +             +       +G  N+V A     V 
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRND-------LSPTTVMSEGARNIVAAMKAHGVD 104

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTG 180
           +V+  +S                     +   +  T       + T+      +  +++G
Sbjct: 105 KVVACTS---------------------AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESG 143

Query: 181 LDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE 240
           L  V + P  +    L             +  +G          ++   D+   +L    
Sbjct: 144 LKYVAVMPPHIGDQPLTGA--------YTVTLDG-----RGPSRVISKHDLGHFMLRCLT 190

Query: 241 KAEAEGRYICTAH 253
             E +G     +H
Sbjct: 191 TDEYDGHSTYPSH 203

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (181), Expect = 1e-15
 Identities = 52/349 (14%), Positives = 105/349 (30%), Gaps = 50/349 (14%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHG-----TAREPSDEKNARLYELEK-ASENLK 58
            E+V VTG  G++ S  V  LL   Y          A          L  +++    +++
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 59  LFKADLLDYDSVKSAIVGCNGVFHI---ACPAPSTTVPNPQMELLEPAVKGTLNVVKACL 115
             + D+LD  +++      + +  I      A   +V  P ++     + GT+ +++   
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKP-LDYYRVNLTGTIQLLEIMK 120

Query: 116 EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEF 175
              VK ++                          +        N Y  SK   E    + 
Sbjct: 121 AHGVKNLVFS---------SSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 171

Query: 176 GKKTGLDVVTIC---------PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK----- 221
            +        +           +  +G   Q   N     + ++     E+L        
Sbjct: 172 CQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYD 231

Query: 222 ------LRMIVDVRDVAEALLLAYEKAEAEGRY----ICTAHMIRARDLVDKLKSLYPNY 271
                 +R  + V D+A+  + A  K + +       + T        +V  ++      
Sbjct: 232 TEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS-GK 290

Query: 272 NYPKSFTE-KEDEVMLT---SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
             P      +E +V          Q+ LGW+    L+    D     K+
Sbjct: 291 KIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 73.9 bits (180), Expect = 1e-15
 Identities = 31/264 (11%), Positives = 71/264 (26%), Gaps = 38/264 (14%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKAD 63
           +K+ + V GA G   + ++++  +  + V              L    +A  N+ LF+  
Sbjct: 2   QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL----QAIPNVTLFQGP 57

Query: 64  LLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI 123
           LL+   +   +     +  I   + +              +    ++  A   A   +  
Sbjct: 58  LLNNVPLMDTLFEGAHLAFINTTSQA-----------GDEIAIGKDLADAAKRAGTIQHY 106

Query: 124 VVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDV 183
           + SS     L   WP   +       +    +       +      +           + 
Sbjct: 107 IYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNN-----------NF 155

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE 243
            ++   L    L+                      +  L  +    DV  ALL  ++   
Sbjct: 156 TSLPYPLFQMELMPDGTFEWHAPF---------DPDIPLPWLDAEHDVGPALLQIFKDGP 206

Query: 244 AEG---RYICTAHMIRARDLVDKL 264
            +    R   T   +    +    
Sbjct: 207 QKWNGHRIALTFETLSPVQVCAAF 230

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 70.6 bits (171), Expect = 2e-14
 Identities = 34/268 (12%), Positives = 76/268 (28%), Gaps = 35/268 (13%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKA 62
           +K RV + G  G++   +V   +S  +  +   R        ++  L        KL +A
Sbjct: 2   KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
            L D+  +  A+   + V         +     Q++L+E           A  EA   + 
Sbjct: 62  SLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVE-----------AIKEAGNIKR 110

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
            + S                  +         R        +                + 
Sbjct: 111 FLPSEFGMDPDIMEH-----ALQPGSITFIDKRKVRRAIEAAS---------------IP 150

Query: 183 VVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA 242
              +  N+  G    S       ++    K       N   + VD  DV    + + +  
Sbjct: 151 YTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210

Query: 243 EAEGR---YICTAHMIRARDLVDKLKSL 267
           +   +        +++  ++++   + L
Sbjct: 211 QTLNKTMYIRPPMNILSQKEVIQIWERL 238

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 70.3 bits (170), Expect = 3e-14
 Identities = 53/327 (16%), Positives = 101/327 (30%), Gaps = 21/327 (6%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV VTG  GF   W+   L +    V G +       +  L+E  + ++ ++    D+ D
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS--LFETARVADGMQSEIGDIRD 67

Query: 67  YDSV--KSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
            + +           VFH+A         +  +E     V GT+ +++A       + +V
Sbjct: 68  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 127

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEAL-EFGKKTGLDV 183
             +      N  W  G   +E       Y  +      ++ +   S        + G  V
Sbjct: 128 NITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAV 187

Query: 184 VTICPNLVLGPLLQSKVNTSSLVLIKLLKE-------------GYESLENKLRMIVDVRD 230
            T+    V+G    +       +L    +                  LE     ++  + 
Sbjct: 188 ATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK 247

Query: 231 VAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVM-LTSE 289
           +        E             +    + + K      ++    +    E   + L   
Sbjct: 248 LYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCS 307

Query: 290 KLQK-LGWSYR-SLEETLVDSVESYKK 314
           K +  LGW  R +L  TL   V  +K 
Sbjct: 308 KAKMQLGWHPRWNLNTTLEYIVGWHKN 334

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 63.7 bits (153), Expect = 4e-12
 Identities = 36/265 (13%), Positives = 69/265 (26%), Gaps = 42/265 (15%)

Query: 5   KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKA 62
           + R+ + GA G++   V K  L   +      RE +   N+   +L ++  +    +   
Sbjct: 3   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
            + D+ S+  A+   + V          +  N                  A  E    + 
Sbjct: 63  SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIK---------------AIKEVGTVKR 107

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLD 182
              S             G  +D     +                EA           G+ 
Sbjct: 108 FFPSE-----------FGNDVDNVHAVEPAKSVFEVKAKVRRAIEA----------EGIP 146

Query: 183 VVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA 242
              +  N   G  L+S             K       N   + V   D+    + A +  
Sbjct: 147 YTYVSSNCFAGYFLRSLAQAGLTA-PPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP 205

Query: 243 EAEGR---YICTAHMIRARDLVDKL 264
               +       A+ +   +LV   
Sbjct: 206 RTLNKTLYLRLPANTLSLNELVALW 230

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 61.0 bits (146), Expect = 2e-11
 Identities = 43/245 (17%), Positives = 67/245 (27%), Gaps = 26/245 (10%)

Query: 7   RVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADL 64
            V VTGA G     V K L      +   G  R             EK      +F  D+
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--------KEKIGGEADVFIGDI 56

Query: 65  LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV 124
            D DS+  A  G + +  +    P      P  +  +      +       E        
Sbjct: 57  TDADSINPAFQGIDALVILTSAVP---KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 113

Query: 125 VSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVV 184
                A     +             D    +  N    + K +AE    ++   +G    
Sbjct: 114 NQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAE----QYLADSGTPYT 169

Query: 185 TICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA 244
            I    +L              + +LL    + L       V   DVAE  + A    EA
Sbjct: 170 IIRAGGLLDKEGG---------VRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEA 220

Query: 245 EGRYI 249
           + +  
Sbjct: 221 KNKAF 225

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.2 bits (143), Expect = 6e-11
 Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 36/263 (13%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           +     R  VTGAG  +    VK L +    V    R      N+ L  L K    ++  
Sbjct: 1   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR-----TNSDLVSLAKECPGIEPV 55

Query: 61  KADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK 120
             DL D+D+ + A+ G   V  +     +  +  P +E+       T           ++
Sbjct: 56  CVDLGDWDATEKALGGIGPV-DLLVNNAALVIMQPFLEV-------TKEAFDRSFSVNLR 107

Query: 121 RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE----AESEALEFG 176
            V  VS  VA  +  R   G I++                Y  +K       ++ A+E G
Sbjct: 108 SVFQVSQMVARDMINRGVPGSIVN-VSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 166

Query: 177 KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVRDVAEA 234
               + V ++ P +VL  + +          +    E    L+ +  LR   +V DV  +
Sbjct: 167 PH-KIRVNSVNPTVVLTDMGKK---------VSADPEFARKLKERHPLRKFAEVEDVVNS 216

Query: 235 LL-LAYEKAEAEGRYICTAHMIR 256
           +L L  +++        +   I 
Sbjct: 217 ILFLLSDRS----AST-SGGGIL 234

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 58.8 bits (140), Expect = 2e-10
 Identities = 45/364 (12%), Positives = 99/364 (27%), Gaps = 56/364 (15%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHG---------------TAREPSDEKNARLYELE 51
           RV V G  G+        L  ++Y V                  +  P    + R+   +
Sbjct: 3   RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 52  KAS-ENLKLFKADLLDYDSVKSAI-----VGCNGVFHIACPAPSTTVPNPQMELLEPAVK 105
             + ++++L+  D+ D++ +  +                    S    +  +      V 
Sbjct: 63  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 122

Query: 106 GTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE----YCRTTNNWY 161
           GTLNV+ A  E   +  +V    +     P     +       + +     Y +  +++Y
Sbjct: 123 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 182

Query: 162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGP---------LLQSKVNTSSLVLIKLLK 212
            LSK           K  G+    +   +V G           L+++++  ++    L +
Sbjct: 183 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNR 242

Query: 213 EGYESLENKLRMIV-------------DVRDVAEALLLAYEKAEAEGRYICTAHMIRARD 259
              ++       +              D     E  +    KA     +          +
Sbjct: 243 FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE 302

Query: 260 LVDKLKSLYPNYNYPKSFTEKEDE--------VMLTSEKLQKLGWSYR-SLEETLVDSVE 310
           L   +                 +               KL +LG       +  L   + 
Sbjct: 303 LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLN 362

Query: 311 SYKK 314
              +
Sbjct: 363 FAVQ 366

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 58.6 bits (140), Expect = 3e-10
 Identities = 48/373 (12%), Positives = 114/373 (30%), Gaps = 65/373 (17%)

Query: 7   RVCVTGAGGFLASWVVKLLLSR-DYFVHG----------------TAREPSDEKNARLYE 49
           RV V G  G++ S  V+ LL   ++ V                          + +   +
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 50  LEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLN 109
              A     L   D+ + D +         +  +        V     + L+      + 
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 110 VVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAE 169
           +++      + +   +    +  +      G +       D    ++  + Y  SK  AE
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183

Query: 170 SEALEFGKKTGLDVVTICPNLVLG------------------PLLQSKVNTSSLVLIKLL 211
               +  +  G+  + +      G                  P++  +V +      +L 
Sbjct: 184 RMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLT 243

Query: 212 KEGYESLENKL---------------RMIVDVRDVAEALLLAYEKAEAEGRY-------- 248
                S + ++               R  V V D+A A +LA +  E  G          
Sbjct: 244 IHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSV 303

Query: 249 --ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKEDEVMLT---SEKLQK-LGWSYR-SL 301
             + T+     R++++  +    +    +    +E +       S+K ++ LGW  +   
Sbjct: 304 FNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDT 363

Query: 302 EETLVDSVESYKK 314
            E ++++   +++
Sbjct: 364 LEAIMETSWKFQR 376

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 54.3 bits (130), Expect = 3e-09
 Identities = 42/257 (16%), Positives = 78/257 (30%), Gaps = 24/257 (9%)

Query: 10  VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS 69
           VTGA   +   + + L      V   AR   +     L EL +A         D+     
Sbjct: 7   VTGATSGIGLEIARRLGKEGLRVFVCARGE-EGLRTTLKELREAGVEADGRTCDVRSVPE 65

Query: 70  VKS---AIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
           +++   A+V   G   +              EL +      +      +    K+V+   
Sbjct: 66  IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAG 125

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE----AESEALEFGKKTGLD 182
                           +     +  +        Y  SK       ++  LE  +  G+ 
Sbjct: 126 -------GMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART-GIT 177

Query: 183 VVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVRDVAEALL-LAY 239
           V  +CP  V  P+  S     S +     +E ++ +  +  +   V   +VAE +  L  
Sbjct: 178 VNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 237

Query: 240 EKAEAEGRYICTAHMIR 256
             A      + TA  + 
Sbjct: 238 PGA----AAV-TAQALN 249

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 3e-09
 Identities = 45/272 (16%), Positives = 87/272 (31%), Gaps = 54/272 (19%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           + L   RV VTGAG  +    V+ L +    V   +R       A L  L +    ++  
Sbjct: 3   LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ-----ADLDSLVRECPGIEPV 57

Query: 61  KADLLDYDSVKSAI---------VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVV 111
             DL D+++ + A+         V    V  +      T          E  ++  + V 
Sbjct: 58  CVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVT--KEAFDRSFEVNLRAVIQVS 115

Query: 112 KACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE---- 167
           +      + R                     +        +   T ++ YC +K      
Sbjct: 116 QIVARGLIAR----------------GVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDML 159

Query: 168 AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMI 225
            +  ALE G    + V  + P +V+  + Q+  +              +++ N+  L   
Sbjct: 160 TKVMALELGPH-KIRVNAVNPTVVMTSMGQATWSD---------PHKAKTMLNRIPLGKF 209

Query: 226 VDVRDVAEALL-LAYEKAEAEGRYICTAHMIR 256
            +V  V  A+L L  +++        T   + 
Sbjct: 210 AEVEHVVNAILFLLSDRS----GMT-TGSTLP 236

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 53.9 bits (129), Expect = 5e-09
 Identities = 48/278 (17%), Positives = 84/278 (30%), Gaps = 50/278 (17%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           M L+ E V +TG    L   +V   ++    V    +  S E+ A L       +N+   
Sbjct: 1   MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK--SAERLAEL--ETDHGDNVLGI 56

Query: 61  KADLLDYDSVKSAI-------------VGCNGVFHIACPA---PSTTVPNPQMELLEPAV 104
             D+   +  K A              +   G++  +      P  ++     E+    V
Sbjct: 57  VGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116

Query: 105 KGTLNVVKACLEAKVKR---VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY 161
           KG ++ VKACL A V     VI   S      N   P              Y    +   
Sbjct: 117 KGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGP-------------LYTAAKHAIV 163

Query: 162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK 221
            L +      A E      + V  +    +   L            I       + L++ 
Sbjct: 164 GLVR----ELAFELAP--YVRVNGVGSGGINSDLRGPSSLGMGSKAIS-TVPLADMLKSV 216

Query: 222 LRM--IVDVRDVAEA-LLLAYEKAEAEGRYICTAHMIR 256
           L +  + +V +   A +  A      +     T  ++ 
Sbjct: 217 LPIGRMPEVEEYTGAYVFFA---TRGDAAPA-TGALLN 250

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 38/275 (13%), Positives = 69/275 (25%), Gaps = 65/275 (23%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
           +  E V +TGAG  +              +          +     + +     +  F  
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAA-KCKGLGAKVHTFVV 63

Query: 63  DLLDYDSVKSAIVGC---NGVFHIACPAPSTTVPNPQMELLEPA--------VKGTLNVV 111
           D  + + + S+        G   I          +      +P         V       
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 123

Query: 112 KACLEAKVK----RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK-- 165
           KA L A  K     ++ V+S       P                         YC SK  
Sbjct: 124 KAFLPAMTKNNHGHIVTVASAAGHVSVPFLL---------------------AYCSSKFA 162

Query: 166 ----TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK 221
                +  ++ L   + TG+    +CPN V    +                   ++    
Sbjct: 163 AVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI-------------------KNPSTS 203

Query: 222 LRMIVDVRDVAEALLLAYEKAEAEGRYICTAHMIR 256
           L   ++  +V   L+        E + I     I 
Sbjct: 204 LGPTLEPEEVVNRLMHG---ILTEQKMIFIPSSIA 235

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 52.0 bits (122), Expect = 3e-08
 Identities = 45/314 (14%), Positives = 88/314 (28%), Gaps = 18/314 (5%)

Query: 8   VCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           + VTG  GF+ S +VK L  +    +          K   L +L  A     + K D L 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIAD---YMDKEDFLI 58

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
                        +FH    + +T      M          L       E         +
Sbjct: 59  QIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAA 118

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
           +      +    +        +   ++         L +  ++     +    G      
Sbjct: 119 TYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK 178

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
                +   L +++N      +      +E  EN  R  V V DVA+  L   E   +  
Sbjct: 179 GSMASVAFHLNTQLNNGESPKL------FEGSENFKRDFVYVGDVADVNLWFLENGVSGI 232

Query: 247 RYICTAHMIRARDLVDKLKSLYPNYNY---PKSFTEKEDEVMLT---SEKLQKLGW--SY 298
             + T      + + D   + +        P     K      T      L+  G+   +
Sbjct: 233 FNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPF 292

Query: 299 RSLEETLVDSVESY 312
           +++ E + + +   
Sbjct: 293 KTVAEGVTEYMAWL 306

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.5 bits (123), Expect = 3e-08
 Identities = 42/266 (15%), Positives = 91/266 (34%), Gaps = 24/266 (9%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR--EPSDEKNARLYELEKASENLKLF 60
             ++   +TG+   +      L       V  T R  E  +E   ++     + +N+   
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 61  KADLLDYDSVKSAI---VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA 117
            AD+         +   +G  G   I        +P+ Q +        ++    A L  
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQ---SIESYDATLNL 119

Query: 118 KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK----TEAESEAL 173
            ++ VI ++       +    KG+I++ +  +   +      +Y ++K        + A+
Sbjct: 120 NLRSVIALTK--KAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAI 177

Query: 174 EFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVRDV 231
           +  +  G+ V +I P LV      +          K       +++      ++   +D+
Sbjct: 178 DLIQH-GIRVNSISPGLVATGFGSAMGMPEETS--KKFYSTMATMKECVPAGVMGQPQDI 234

Query: 232 AEALL-LAYEKAEAEGRYICTAHMIR 256
           AE +  LA  K      YI   H + 
Sbjct: 235 AEVIAFLADRKT---SSYI-IGHQLV 256

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 3e-08
 Identities = 40/272 (14%), Positives = 75/272 (27%), Gaps = 58/272 (21%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD-EKNARLYELEKASENLKLFK 61
                  VTGA G + + V + L+ +   V G AR   + E+ A   +       L  ++
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 62  ADLLDYDSVKSA---IVGCNGVFHIACPAPSTTVPNPQME--------LLEPAVKGTLNV 110
            DL + + + S    I   +    I         P+  +         +    V      
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 127

Query: 111 VKACLEAKVK------RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS 164
            +   ++  +       +I ++S     + P                       ++Y  +
Sbjct: 128 TREAYQSMKERNVDDGHIININSMSGHRVLPLS-------------------VTHFYSAT 168

Query: 165 K----TEAESEALEF-GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE 219
           K       E    E    +T +    I P +V                 KL  +  E   
Sbjct: 169 KYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-----------KLHDKDPEKAA 217

Query: 220 NKLRM--IVDVRDVAEALLLAYEKAEAEGRYI 249
                   +   DVAEA++             
Sbjct: 218 ATYEQMKCLKPEDVAEAVIYV---LSTPAHIQ 246

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 50.8 bits (121), Expect = 6e-08
 Identities = 33/256 (12%), Positives = 63/256 (24%), Gaps = 42/256 (16%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           M L  + V    A G +     + L+ R+           +       +      N+   
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFH 60

Query: 61  KADL-LDYDSVKSA---IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE 116
             D+ +     K     I        I          +     +     G +N   A L+
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILD 120

Query: 117 AKVKR-------VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKT--E 167
              KR       +  + S        + P                      Y  SK    
Sbjct: 121 FWDKRKGGPGGIIANICSVTGFNAIHQVP---------------------VYSASKAAVV 159

Query: 168 AESEAL-EFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV 226
           + + +L +    TG+   +I P +   PL+ +  +           E   +         
Sbjct: 160 SFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD-------VEPRVAELLLSHPTQ 212

Query: 227 DVRDVAEALLLAYEKA 242
                 +  + A E  
Sbjct: 213 TSEQCGQNFVKAIEAN 228

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 51.1 bits (120), Expect = 6e-08
 Identities = 48/348 (13%), Positives = 97/348 (27%), Gaps = 53/348 (15%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADLL 65
           RV + G  GF+ + + + LL  D++ V+G      D  +  +        +    + D+ 
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGL-----DIGSDAISRFLN-HPHFHFVEGDIS 55

Query: 66  DYDSVKSAIV----GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR 121
            +       V        +  IA P   T  P    EL        +       +  +  
Sbjct: 56  IHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFP 115

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGL 181
                                 ++               Y +SK   +     +G+K GL
Sbjct: 116 STSEV-------YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGL 168

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK----------LRMIVDVRDV 231
                 P   +GP L +           + +     +E             R   D+RD 
Sbjct: 169 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 228

Query: 232 AEALLLAYEKAEAEGRY-----ICTAHMIRARDLVDKLKSLYPN---------------Y 271
            EAL    E A               +     +L + L + +                  
Sbjct: 229 IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVV 288

Query: 272 NYPKSFTEKEDEVMLT---SEKLQK-LGWSYR-SLEETLVDSVESYKK 314
                + +   +V           + L W  +  ++ET+ ++++ + +
Sbjct: 289 ESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLR 336

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 50.1 bits (119), Expect = 9e-08
 Identities = 41/275 (14%), Positives = 80/275 (29%), Gaps = 46/275 (16%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           ++   + + VTG    +     + + +    V    R  +D         ++     K +
Sbjct: 5   ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAY 64

Query: 61  KADLLDYDSVKSA---IVGCNGVFHIACPAPSTTVPNPQMELLEP--------AVKGTLN 109
           + D+ + D V      I    G           +V  P  EL            V G  N
Sbjct: 65  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 110 VVKACLEAKVK-----RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLS 164
             +A  +  ++      ++V SS  +  +N     G +      +   Y  +      L 
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL------TQVFYNSSKAACSNLV 178

Query: 165 KTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--L 222
           K      A E+    G+ V  + P  V                  + K+  +   +   L
Sbjct: 179 K----GLAAEWASA-GIRVNALSPGYVNTDQTA-----------HMDKKIRDHQASNIPL 222

Query: 223 RMIVDVRDVAEA-LLLAYEKAEAEGRYICTAHMIR 256
                  ++    +LL  + A     Y+ T     
Sbjct: 223 NRFAQPEEMTGQAILLLSDHA----TYM-TGGEYF 252

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 49.4 bits (116), Expect = 2e-07
 Identities = 33/317 (10%), Positives = 76/317 (23%), Gaps = 49/317 (15%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           ++ +TGA G L   + K L  ++  V  T  +                        D+ +
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITN 40

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
             +V            I C A             +  +   +N +     A     +   
Sbjct: 41  VLAVNKFFNEKKPNVVINCAAH----TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAE 96

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
                       + +                                 F K        +
Sbjct: 97  IVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN---------FVKALNPKYYIV 147

Query: 187 CPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAEG 246
               + G          +L       +      +++       D+A  +L   ++     
Sbjct: 148 RTAWLYGDGNNFVKTMINLGKTHDELKVV---HDQVGTPTSTVDLARVVLKVIDEKNYGT 204

Query: 247 RYICTAHMIRARDLVDKLKSLY---------PNYNYPKSFTEKEDEVMLTSEKLQK-LGW 296
            +     +    D   ++  L              +P+     +  V L +  L+   G 
Sbjct: 205 FHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSV-LRNYMLELTTGD 263

Query: 297 SYRSLEETLVDSVESYK 313
             R  +E+L + ++  +
Sbjct: 264 ITREWKESLKEYIDLLQ 280

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 49.3 bits (117), Expect = 2e-07
 Identities = 34/266 (12%), Positives = 82/266 (30%), Gaps = 26/266 (9%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR--EPSDEKNARLYELEKASENLKLF 60
              + V +TG+   +      +       V  T R  +  +E   ++ +    +E +   
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 61  KADLLDYDSVKSAI---VGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA 117
            AD+ +       I   +   G   I        + +      +P     + + +   + 
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQP-----VELYQKTFKL 116

Query: 118 KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE----AESEAL 173
             + VI ++       +    KG+I++ +         +   +Y  +K          A+
Sbjct: 117 NFQAVIEMTQKTKE--HLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAI 174

Query: 174 EFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVRDV 231
           +  +  G+ V ++ P  V    + +     +      L     S +    +       ++
Sbjct: 175 DLIQH-GVRVNSVSPGAVATGFMGAMGLPETAS--DKLYSFIGSRKECIPVGHCGKPEEI 231

Query: 232 AEALL-LAYEKAEAEGRYICTAHMIR 256
           A  ++ LA         YI     I 
Sbjct: 232 ANIIVFLA---DRNLSSYI-IGQSIV 253

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 47.3 bits (112), Expect = 8e-07
 Identities = 39/265 (14%), Positives = 76/265 (28%), Gaps = 36/265 (13%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
           L+ +   +TG    +   +    +     V  T R    +   +  +     + ++ F+ 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR--HSDVGEKAAKSVGTPDQIQFFQH 61

Query: 63  DLLDYDSVK---SAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV 119
           D  D D       A     G            V     E        T    +  L   +
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEET-------TTAEWRKLLAVNL 114

Query: 120 KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK----TEAESEALEF 175
             V   +      +  +     I++     +      +   Y  SK      ++S AL+ 
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIIN-MSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDC 173

Query: 176 G-KKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVRDVA 232
             K   + V T+ P  +  PL+                E   S   K  +  I +  D+A
Sbjct: 174 ALKDYDVRVNTVHPGYIKTPLVDDLPG----------AEEAMSQRTKTPMGHIGEPNDIA 223

Query: 233 EALL-LAYEKAEAEGRYICTAHMIR 256
              + LA  ++    ++  T     
Sbjct: 224 YICVYLASNES----KFA-TGSEFV 243

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 32/264 (12%), Positives = 69/264 (26%), Gaps = 24/264 (9%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLF 60
           M L+ +   +TG+   +     +  +     V          +        +        
Sbjct: 1   MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARAT----AAEIGPAACAI 56

Query: 61  KADLLDYDSVK---SAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVK--GTLNVVKACL 115
             D+ D  S+    + ++   G   I     +     P +E+   +      +NV     
Sbjct: 57  ALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLF 116

Query: 116 EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEF 175
             +     +++ G    +     +     E         +             +S  L  
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLT------QSAGLNL 170

Query: 176 GKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVRDVAE 233
            +  G++V  I P +V G          +        E    +        +    D+  
Sbjct: 171 IRH-GINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTG 229

Query: 234 ALL-LAYEKAEAEGRYICTAHMIR 256
             + LA  +A     YI  A    
Sbjct: 230 MAIFLATPEA----DYI-VAQTYN 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 1e-06
 Identities = 53/294 (18%), Positives = 90/294 (30%), Gaps = 56/294 (19%)

Query: 8   VCVTGAGGFLASWVVKLLLS---RDYFVHGTAREPSDEKNAR--LYELEKASENLKLFKA 62
           V +TG    +   +   L S   + + V+ T R+   +         L     +L+  + 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 63  DLLDYDSVKSAIVGCNGVF---------HIACPAPSTTVPNPQMELLEPAVKGTLNVVKA 113
           D+ D  SV +A                             +    +L+  V GT+ +++A
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 114 CLEAKVKR----VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTE-- 167
            L    +R    V+V  S   +   P                         YC SK    
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLPFND---------------------VYCASKFALE 163

Query: 168 --AESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL--- 222
              ES A+      G+ +  I    V    ++  + +   VL +     +      L   
Sbjct: 164 GLCESLAVLLLPF-GVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHS 222

Query: 223 -----RMIVDVRDVAEALLLAYEKAEAEGRYICTAH---MIRARDLVDKLKSLY 268
                    +  +VAE  L A    +   RY  T     ++R R L D   S Y
Sbjct: 223 KQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMR-LDDPSGSNY 275

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 36/268 (13%), Positives = 77/268 (28%), Gaps = 28/268 (10%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR--EPSDEKNARLYELEKASENLKLF 60
              + V +TG+   +      L       V  T R  E  +E    + +   + + +   
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 61  KADLLDYDSVKSA---IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA 117
            AD+   D         +   G   +        +P+             +++    L+ 
Sbjct: 63  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDA---FGTTGTDQGIDIYHKTLKL 119

Query: 118 KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEA------ESE 171
            ++ VI ++  V     P     +       S     +   ++   +  +A       S 
Sbjct: 120 NLQAVIEMTKKVK----PHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRST 175

Query: 172 ALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVR 229
           A++  K  G+ V ++ P +V      +          +       S +    +       
Sbjct: 176 AIDLAKF-GIRVNSVSPGMVETGFTNAMGMPDQAS--QKFYNFMASHKECIPIGAAGKPE 232

Query: 230 DVAEALL-LAYEKAEAEGRYICTAHMIR 256
            +A  +L LA         YI     I 
Sbjct: 233 HIANIILFLADRNL---SFYI-LGQSIV 256

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.3 bits (108), Expect = 1e-06
 Identities = 28/251 (11%), Positives = 57/251 (22%), Gaps = 48/251 (19%)

Query: 7   RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           RV + GA G     ++  +LS        A            +         L + D   
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSI 63

Query: 67  YDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS 126
             +                                                         
Sbjct: 64  DTAFCCLGTTIKEAGSEEAFRAVDFDLPLA------------------------------ 93

Query: 127 SGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTI 186
                       K  +               +    +     + E  +  ++ G   +TI
Sbjct: 94  ----------VGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTI 143

Query: 187 C-PNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEAE 245
             P+L+ GP  + ++       I  +      L  K   I +  D+A AL     +    
Sbjct: 144 ARPSLLFGPREEFRLAEILAAPIARI------LPGKYHGI-EACDLARALWRLALEEGKG 196

Query: 246 GRYICTAHMIR 256
            R++ +  + +
Sbjct: 197 VRFVESDELRK 207

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (101), Expect = 9e-06
 Identities = 29/255 (11%), Positives = 55/255 (21%), Gaps = 42/255 (16%)

Query: 4   EKERVCVTGAGGFLASWVVKLLLSRDYF--VHGTAREPSDEKNARLYELEKASENLKLFK 61
           + + V + GA G     ++K +L +  F  V    R            +           
Sbjct: 13  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN---------- 62

Query: 62  ADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR 121
                           +        +           L     K             V +
Sbjct: 63  ------------QEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLK 110

Query: 122 VIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGL 181
                             G        S K   +++N  Y   K E E+   +  +    
Sbjct: 111 SA----------ELAKAGGCKHF-NLLSSKGADKSSNFLYLQVKGEVEA---KVEELKFD 156

Query: 182 DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEK 241
                 P ++L    +S+     +                    V V  V  A+L    +
Sbjct: 157 RYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDS----WASGHSVPVVTVVRAMLNNVVR 212

Query: 242 AEAEGRYICTAHMIR 256
              +   +     I 
Sbjct: 213 PRDKQMELLENKAIH 227

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 41/265 (15%), Positives = 75/265 (28%), Gaps = 37/265 (13%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
           L+ + V VTG    +   +V+        +H  AR    E N  L + +K    +     
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE-YELNECLSKWQKKGFQVTGSVC 64

Query: 63  DLLDYDSVKSAIVGC----NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK 118
           D       +  +        G   I           P ++        T       +   
Sbjct: 65  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY-------TAEDFSFHISTN 117

Query: 119 VKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCR--TTNNWYCLSK----TEAESEA 172
           ++    +S        P        +    S        +  + Y  +K      A + A
Sbjct: 118 LESAYHLSQLAH----PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 173

Query: 173 LEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVA 232
            E+    G+    + P ++  PL ++       V     K+   S    L    +  +V+
Sbjct: 174 CEWASD-GIRANAVAPAVIATPLAEA-------VYDDEFKKVVIS-RKPLGRFGEPEEVS 224

Query: 233 EALL-LAYEKAEAEGRYICTAHMIR 256
             +  L    A     YI T   I 
Sbjct: 225 SLVAFLCMPAA----SYI-TGQTIC 244

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 39/276 (14%), Positives = 80/276 (28%), Gaps = 61/276 (22%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
            E +   VTGAG  +   + K+L      V   +R      ++ + E++        +  
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ-KSCDSVVDEIKSFGYESSGYAG 66

Query: 63  DLLDYDSVKSA---IVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNV--------- 110
           D+   + +      I+  +    I       T  N  + +     +  L           
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYIT 126

Query: 111 ---VKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK-- 165
               K  +  +  R+I +SS V +  N                          Y  SK  
Sbjct: 127 QPISKRMINNRYGRIINISSIVGLTGNVGQA---------------------NYSSSKAG 165

Query: 166 --TEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK-- 221
                +S A E   +  + V  I P  +   +                ++  +++ +   
Sbjct: 166 VIGFTKSLAKELASR-NITVNAIAPGFISSDMTDKIS-----------EQIKKNIISNIP 213

Query: 222 LRMIVDVRDVAEALL-LAYEKAEAEGRYICTAHMIR 256
              +    +VA     L+ +K+     YI    +  
Sbjct: 214 AGRMGTPEEVANLACFLSSDKS----GYI-NGRVFV 244

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 45/268 (16%), Positives = 80/268 (29%), Gaps = 47/268 (17%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKL- 59
           M L+ + V +TGA   +    ++L       +     E           L +A+E +   
Sbjct: 1   MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEG--------PLREAAEAVGAH 52

Query: 60  -FKADLLDYDSVKS---AIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACL 115
               D+ D  SV+      +   G            V    +       K  L   +  L
Sbjct: 53  PVVMDVADPASVERGFAEALAHLGRLDGV-------VHYAGITRDNFHWKMPLEDWELVL 105

Query: 116 EAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK----TEAESE 171
              +    +V+   A     R      +  T            N Y  S         + 
Sbjct: 106 RVNLTGSFLVA--KAASEAMREKNPGSIVLTASRVYLGNLGQAN-YAASMAGVVGLTRTL 162

Query: 172 ALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK--LRMIVDVR 229
           ALE G+  G+ V T+ P  +   +             K+ ++  E       L       
Sbjct: 163 ALELGRW-GIRVNTLAPGFIETRMTA-----------KVPEKVREKAIAATPLGRAGKPL 210

Query: 230 DVAEALL-LAYEKAEAEGRYICTAHMIR 256
           +VA A L L  +++     +I T  ++ 
Sbjct: 211 EVAYAALFLLSDES----SFI-TGQVLF 233

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 39/274 (14%), Positives = 81/274 (29%), Gaps = 34/274 (12%)

Query: 3   LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKA 62
           L+ ++V VTGA   +   +   L      V  TAR     +    + LE  + +      
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71

Query: 63  DLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRV 122
            + D    +  +     +           + N  + L        ++ V+  +E      
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH----DDIHHVRKSMEVNFLSY 127

Query: 123 IVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSK----TEAESEALEFG-K 177
           +V++  VA     +   G I+  +  + K         Y  SK        S   E+   
Sbjct: 128 VVLT--VAALPMLKQSNGSIVVVSSLAGK-VAYPMVAAYSASKFALDGFFSSIRKEYSVS 184

Query: 178 KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLL 237
           +  + +      L+        V+                            + A  ++ 
Sbjct: 185 RVNVSITLCVLGLIDTETAMKAVS-----------------GIVHMQAAPKEECALEIIK 227

Query: 238 AYEKAEAE---GRYICTAHMIR--ARDLVDKLKS 266
                + E      + T  +IR  +R +++ L S
Sbjct: 228 GGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYS 261

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 42.2 bits (97), Expect = 4e-05
 Identities = 6/72 (8%), Positives = 14/72 (19%), Gaps = 19/72 (26%)

Query: 7  RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD 66
           + + G  G +   + + L      +                           F  D  +
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE-------------------FCGDFSN 42

Query: 67 YDSVKSAIVGCN 78
             V   +    
Sbjct: 43 PKGVAETVRKLR 54

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 31/215 (14%), Positives = 60/215 (27%), Gaps = 46/215 (21%)

Query: 1   MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYE-LEKASENLK- 58
           +  +   V VTGAGG L          R   V         +   +     +K  E ++ 
Sbjct: 3   LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR 62

Query: 59  ------LFKADLLDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPA--------V 104
                      +   + +    +   G   +               + +          +
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHL 122

Query: 105 KGTLNVVKACLEAKVK----RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW 160
           +G+  V +A  +   K    R+I+ +S  A G+   + +                     
Sbjct: 123 RGSFQVTRAAWDHMKKQNYGRIIMTAS--ASGIYGNFGQA-------------------N 161

Query: 161 YCLSK----TEAESEALEFGKKTGLDVVTICPNLV 191
           Y  +K      A +  +E  K   +   TI PN  
Sbjct: 162 YSAAKLGLLGLANTLVIEGRKN-NIHCNTIAPNAG 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	319
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.95
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.94
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.94
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.94
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.94
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.94
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.94
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.94
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.94
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.94
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.94
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.94
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.94
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.94
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.94
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.94
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.93
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.93
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.93
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.93
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.93
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.93
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.93
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.93
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.93
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.93
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.92
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.92
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.92
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.92
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.92
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.92
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.92
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.92
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.92
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.91
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.91
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.91
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.91
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.91
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.91
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.91
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.9
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.9
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.89
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.89
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.88
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.88
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.88
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.87
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.86
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.86
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.86
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.85
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.85
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.83
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.82
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.81
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.8
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.76
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.75
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.75
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.72
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.7
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.5
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.57
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.55
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.48
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.43
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.33
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.28
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.27
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.26
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.17
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.13
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.1
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.06
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.06
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.05
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.03
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.01
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.01
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.99
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.98
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.94
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.92
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.9
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.9
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.9
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.86
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.85
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.83
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.82
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.81
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.78
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.78
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.76
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.75
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.73
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.72
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.7
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.7
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.68
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.58
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.55
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.54
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.54
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.53
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.51
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.51
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.48
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.48
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.41
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.4
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.35
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.32
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.31
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.3
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.28
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.26
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.2
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.17
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.13
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.1
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.09
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.08
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.06
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.04
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.03
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.03
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.01
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.99
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.97
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.95
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.92
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.92
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.85
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.85
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.84
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.83
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.72
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.65
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.62
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.62
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.61
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.59
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.57
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.56
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.54
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.53
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.53
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.48
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.45
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.45
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.43
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.43
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.41
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.41
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.41
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.41
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.39
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.38
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.38
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.33
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.29
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.27
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.23
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.21
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.21
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.19
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.18
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.14
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.12
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	96.09
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.02
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.98
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.97
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.96
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.95
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.93
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.92
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.88
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.88
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.87
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.87
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.86
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.85
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.81
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.81
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.77
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	95.75
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.72
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.7
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.7
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.63
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.62
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.53
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.53
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.47
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.47
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.44
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.42
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.4
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.4
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.17
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.95
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.9
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.9
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.89
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.79
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.73
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.65
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.65
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.6
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.58
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	94.52
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.48
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.45
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.39
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.33
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.23
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.14
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.12
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.9
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.9
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.78
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.78
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.67
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.53
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	93.52
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.44
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.4
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.3
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.26
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.16
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.13
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	93.0
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	92.72
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	92.72
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.65
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.59
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.43
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.39
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	92.35
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.22
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.17
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.91
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	91.69
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.67
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.6
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.54
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.5
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	91.45
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.42
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.12
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.05
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	91.02
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	90.95
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	90.93
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.73
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.28
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	89.86
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	89.58
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	89.4
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	89.33
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	89.28
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.08
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.49
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.64
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	87.62
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.55
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.46
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.44
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	87.43
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	87.2
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	86.79
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	86.7
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.88
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.8
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	85.68
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	85.64
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	85.51
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	85.33
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	85.33
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	85.28
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.0
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.95
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	84.58
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	84.41
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	84.21
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	83.93
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.84
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.8
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.67
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	83.45
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	83.35
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	82.92
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.62
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	82.24
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	81.92
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.7
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.64
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	81.29
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	81.04
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.68
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	80.31
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	80.11
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	80.08

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-49  Score=347.21  Aligned_cols=297  Identities=15%  Similarity=0.139  Sum_probs=226.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh----ccCCCeEEEEccCCChhhHHHHhc--Ccce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE----KASENLKLFKADLLDYDSVKSAIV--GCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   79 (319)
                      |+|||||||||||++|+++|+++|++|++++|..+......+..+.    ...++++++++|++|.+.+.++++  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            7899999999999999999999999999999975432222222221    224689999999999999999998  4699


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC---EEEEeccccccccCCCCCCCcccCCCCCCCcccccc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK---RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRT  156 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~---~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  156 (319)
                      |+|+|+........+.+..++++|+.|+.+|+++|++.+++   ||||+||.++ |+.+   ...+++|+++..|     
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v-YG~~---~~~~~~E~~~~~P-----  152 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL-YGLV---QEIPQKETTPFYP-----  152 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-GTTC---CSSSBCTTSCCCC-----
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh-hCCC---CCCCcCCCCCCCC-----
Confidence            99999987665433334788999999999999999987653   7999999665 4443   4678999987765     


Q ss_pred             CCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc----cCCcccccccHHH
Q 020924          157 TNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES----LENKLRMIVDVRD  230 (319)
Q Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~D  230 (319)
                       .++|+.||.++|.+++.++++++++++++||+++|||......  ..+...+.+...+....    .|++.|+|+|++|
T Consensus       153 -~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D  231 (357)
T d1db3a_         153 -RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD  231 (357)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred             -CChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence             7889999999999999999989999999999999999754332  23344555555555433    3458899999999


Q ss_pred             HHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC--------------------CCCCC-------------
Q 020924          231 VAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY--------------------NYPKS-------------  276 (319)
Q Consensus       231 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~--------------------~~~~~-------------  276 (319)
                      +|++++.++++. .++.||++ |+.+|++|+++.+.+.+|..                    ..+..             
T Consensus       232 ~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (357)
T d1db3a_         232 YVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRY  310 (357)
T ss_dssp             HHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGG
T ss_pred             HHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeecccc
Confidence            999999999875 45688665 69999999999999998610                    00000             


Q ss_pred             -CCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHH
Q 020924          277 -FTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYK  313 (319)
Q Consensus       277 -~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~  313 (319)
                       ++.......+|++|+++ |||+|+ +|+|+|++++++..
T Consensus       311 ~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l  350 (357)
T d1db3a_         311 FRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL  350 (357)
T ss_dssp             CCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             CCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence             01112335679999998 999998 99999999986543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.7e-49  Score=344.78  Aligned_cols=298  Identities=21%  Similarity=0.266  Sum_probs=243.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeE------EEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFV------HGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |+|||||||||||++++++|+++|++|      +++++.........+... ....+++++.+|+.+..........+|.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~   79 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELRGVDA   79 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccccccce
Confidence            579999999999999999999999764      444433222222222222 1246899999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      |+|+|+..............+++|+.++.+++++|++.++++|||+||.++|+..    ...+++|+++..|      .+
T Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~----~~~~~~E~~~~~p------~~  149 (322)
T d1r6da_          80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSI----DSGSWTESSPLEP------NS  149 (322)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCC----SSSCBCTTSCCCC------CS
T ss_pred             EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCC----CCCCCCCCCCCCC------CC
Confidence            9999987654322222367889999999999999999999999999997766544    3678899988776      78


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~  236 (319)
                      +||.+|.++|.+++.++++++++++++||+++|||++... ..+..++.++..++++.   .|++.|+|+|++|+|++++
T Consensus       150 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~  228 (322)
T d1r6da_         150 PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHH
Confidence            8999999999999999999999999999999999976543 56778888999988766   3568999999999999999


Q ss_pred             HhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC-----CCCCCCCceeechHHHHH-hCCccc-cHHHHHHHH
Q 020924          237 LAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK-----SFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDS  308 (319)
Q Consensus       237 ~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~-----~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~  308 (319)
                      .+++++..+++||++ +...++.|+++.+.+.+|. ..+.     ..+.......+|++|+++ |||+|+ +++|+|+++
T Consensus       229 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~  307 (322)
T d1r6da_         229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGA-DWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLART  307 (322)
T ss_dssp             HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTC-CGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred             HHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCC-CccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHH
Confidence            999998877799776 6999999999999999983 2211     122333457899999998 999998 999999999


Q ss_pred             HHHHHHcC
Q 020924          309 VESYKKVG  316 (319)
Q Consensus       309 ~~~~~~~~  316 (319)
                      ++||+++.
T Consensus       308 i~w~~~n~  315 (322)
T d1r6da_         308 VRWYRENR  315 (322)
T ss_dssp             HHHHHHCH
T ss_pred             HHHHHHhH
Confidence            99999864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-49  Score=343.42  Aligned_cols=296  Identities=19%  Similarity=0.261  Sum_probs=230.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +|||||||||||||++++++|+++|++|++++|....... .+.... ....+.+...|+.+     .++.++|+|||+|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~-~~~~~d~~~~~~~~-----~~~~~~d~VihlA   73 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR-NVEHWI-GHENFELINHDVVE-----PLYIEVDQIYHLA   73 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-GTGGGT-TCTTEEEEECCTTS-----CCCCCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHH-HHHHhc-CCCceEEEehHHHH-----HHHcCCCEEEECc
Confidence            4799999999999999999999999999999874432211 111111 12345555555543     3456899999999


Q ss_pred             ccCCCC-CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           85 CPAPST-TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        85 ~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      +..... ...++ ...+++|+.++.+|+++|++.++ |+||+||.++|+..    ...+++|+..... .|..|.++|+.
T Consensus        74 a~~~~~~~~~~~-~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~----~~~~~~e~~~~~~-~~~~p~~~Y~~  146 (312)
T d2b69a1          74 SPASPPNYMYNP-IKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDP----EVHPQSEDYWGHV-NPIGPRACYDE  146 (312)
T ss_dssp             SCCSHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSC----SSSSBCTTCCCBC-CSSSTTHHHHH
T ss_pred             ccCCchhHHhCH-HHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCC----CCCCCCccccCCC-CCCCCccHHHH
Confidence            976543 22344 77899999999999999999887 89999997765543    2456666553322 23345889999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC-CccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhh
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV-NTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      ||.++|.+++.+++.++++++++||+++|||+..... ..++.++.++..|+++.   .|.+.++|+|++|+|++++.++
T Consensus       147 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~  226 (312)
T d2b69a1         147 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM  226 (312)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHH
Confidence            9999999999999999999999999999999876543 46778888999998776   3458899999999999999999


Q ss_pred             ccCCCCceEEEe-cccCCHHHHHHHHHHhCCCC---CCCCCCCCCCCceeechHHHHH-hCCccc-cHHHHHHHHHHHHH
Q 020924          240 EKAEAEGRYICT-AHMIRARDLVDKLKSLYPNY---NYPKSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDSVESYK  313 (319)
Q Consensus       240 ~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~---~~~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~  313 (319)
                      +.. ..+.||++ +...++.++++++.+.++..   .+............+|++|+++ |||+|. +++++|+++++||+
T Consensus       227 ~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~  305 (312)
T d2b69a1         227 NSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR  305 (312)
T ss_dssp             TSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             hhc-cCCceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence            765 45678665 69999999999999999732   1122233344568889999988 999999 99999999999998


Q ss_pred             Hc
Q 020924          314 KV  315 (319)
Q Consensus       314 ~~  315 (319)
                      ++
T Consensus       306 ~~  307 (312)
T d2b69a1         306 KE  307 (312)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=4e-49  Score=347.31  Aligned_cols=301  Identities=18%  Similarity=0.233  Sum_probs=232.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC-ChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP-SDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      |+|||||||||||++|+++|+++|++|++..++. .......+..+. .+++++++.+|++|...+..+++  ++|+|||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            5799999999999999999999999855544432 222222222221 24689999999999999999887  5899999


Q ss_pred             ecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCC---------CCEEEEeccccccccCCCCC------CCcccCCC
Q 020924           83 IACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAK---------VKRVIVVSSGVAVGLNPRWP------KGQIMDET  146 (319)
Q Consensus        83 ~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~---------~~~iv~~SS~~~~~~~~~~~------~~~~~~E~  146 (319)
                      +||...... ..+| ..++++|+.++.+++++|++.+         +++|||+||.++|+.....+      ......|+
T Consensus        80 lAa~~~~~~~~~~p-~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~  158 (361)
T d1kewa_          80 LAAESHVDRSITGP-AAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             CCSCCCHHHHHHCT-HHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             CccccchhhHHhCH-HHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence            999755332 2344 7789999999999999998764         45999999977665432100      00112233


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  223 (319)
                      ++.      .|.++||.||.++|.++..++++++++++++||+++|||..... ..+..++.++.+|+++.   .|++.|
T Consensus       159 ~~~------~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r  231 (361)
T d1kewa_         159 TAY------APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIR  231 (361)
T ss_dssp             SCC------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEE
T ss_pred             CCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEE
Confidence            333      34788999999999999999999999999999999999976543 46778889999998765   456899


Q ss_pred             ccccHHHHHHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCC-----------CCCCCCCCCCCCceeechHHH
Q 020924          224 MIVDVRDVAEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPN-----------YNYPKSFTEKEDEVMLTSEKL  291 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~d~~k~  291 (319)
                      +|+|++|+|+++..++++...+++||++ +...++.|+++.+.+.++.           +......+.....+.+|++|+
T Consensus       232 ~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  311 (361)
T d1kewa_         232 DWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKI  311 (361)
T ss_dssp             EEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHH
T ss_pred             eCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHH
Confidence            9999999999999999988777799776 5889999999999887631           000111223345678999999


Q ss_pred             HH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          292 QK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       292 ~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      ++ |||+|+ +++|+|+++++||+++
T Consensus       312 ~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         312 SRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            98 999998 9999999999999876

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.8e-47  Score=334.54  Aligned_cols=301  Identities=18%  Similarity=0.154  Sum_probs=241.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh--HHHHHhhh--ccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK--NARLYELE--KASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      +.|+|||||||||||++|+++|+++||+|++++|......  ........  .....++++.+|+.|...+......++.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            4579999999999999999999999999999997443211  11111111  1135789999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      ++|+++..........+...+++|+.|+.+|+++|++.++++|||+||.++|+..    ...+++|+++..|      .+
T Consensus        95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~----~~~~~~E~~~~~p------~~  164 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDH----PGLPKVEDTIGKP------LS  164 (341)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC----CCSSBCTTCCCCC------CS
T ss_pred             cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCC----CCCCccCCCCCCC------CC
Confidence            9999986654322223377899999999999999999999999999997766543    4678999998776      78


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccc-c--CCcccccccHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYES-L--ENKLRMIVDVRDVAE  233 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~  233 (319)
                      .|+.+|.++|.+++.++++++++++++||+++||+...+..   ..+..++.+++.|+++. .  |.+.|+|+|++|+|+
T Consensus       165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~  244 (341)
T d1sb8a_         165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  244 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence            89999999999999999988999999999999999765442   45667888889998766 3  458999999999999


Q ss_pred             HHHHhhccCCC--CceEEEe-cccCCHHHHHHHHHHhCCCCCCCC--------CCCCCCCceeechHHHHH-hCCccc-c
Q 020924          234 ALLLAYEKAEA--EGRYICT-AHMIRARDLVDKLKSLYPNYNYPK--------SFTEKEDEVMLTSEKLQK-LGWSYR-S  300 (319)
Q Consensus       234 ~~~~~~~~~~~--~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~--------~~~~~~~~~~~d~~k~~~-lg~~~~-~  300 (319)
                      ++..++.....  +++|+++ +...|++|+++.+.+..+......        ..+.+.....+|++|+++ |||+|+ +
T Consensus       245 a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~s  324 (341)
T d1sb8a_         245 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYD  324 (341)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCC
T ss_pred             hhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCC
Confidence            99998876533  4478776 589999999999999886221111        112223457789999998 999999 9


Q ss_pred             HHHHHHHHHHHHHH
Q 020924          301 LEETLVDSVESYKK  314 (319)
Q Consensus       301 ~~~~l~~~~~~~~~  314 (319)
                      ++++|+++++||+.
T Consensus       325 l~~gi~~ti~wy~~  338 (341)
T d1sb8a_         325 VSAGVALAMPWYIM  338 (341)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999987

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-46  Score=332.05  Aligned_cols=301  Identities=15%  Similarity=0.139  Sum_probs=230.1

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |+ ++|+|||||||||||++|+++|+++||+|++++|........       .....++..+|+++.+.+..+++++|+|
T Consensus        12 ~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~d~V   83 (363)
T d2c5aa1          12 PS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTEGVDHV   83 (363)
T ss_dssp             TT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh-------hcccCcEEEeechhHHHHHHHhhcCCeE
Confidence            55 567899999999999999999999999999998765532111       1135688889999999999999999999


Q ss_pred             EEecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCC-CCCccccccCC
Q 020924           81 FHIACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETC-WSDKEYCRTTN  158 (319)
Q Consensus        81 i~~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~-~~~~~~~~~~~  158 (319)
                      ||+|+...... ........+..|+.++.+++++|++.++++||++||...++...    ..+.+|.. ......+..|.
T Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~----~~~~~~~~~~~~e~~~~~p~  159 (363)
T d2c5aa1          84 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFK----QLETTNVSLKESDAWPAEPQ  159 (363)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGG----SSSSSSCEECGGGGSSBCCS
T ss_pred             eecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccc----cccccccccccccCCcCCCC
Confidence            99998765431 12334778899999999999999999999999999977665443    23333322 12222333458


Q ss_pred             chHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCC---ccHHHH-HHHHhcCccc---cCCcccccccHHHH
Q 020924          159 NWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVN---TSSLVL-IKLLKEGYES---LENKLRMIVDVRDV  231 (319)
Q Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~---~~~~~~-~~~~~~~~~~---~~~~~~~~i~v~D~  231 (319)
                      ++|+.+|..+|.+++.+.+.++++++++||+++||+.......   ...... ..........   .|.+.|+|+|++|+
T Consensus       160 ~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~  239 (363)
T d2c5aa1         160 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC  239 (363)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHH
Confidence            8999999999999999999899999999999999987654321   112222 2222222222   34589999999999


Q ss_pred             HHHHHHhhccCCCCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC---CCCCCCCceeechHHHHH-hCCccc-cHHHHH
Q 020924          232 AEALLLAYEKAEAEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK---SFTEKEDEVMLTSEKLQK-LGWSYR-SLEETL  305 (319)
Q Consensus       232 a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~---~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l  305 (319)
                      |++++.+++.. .++.||++ +..+|+.|+++++.+..|.. .+.   ..+.......+|++|+++ |||+|. +++++|
T Consensus       240 ~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~-~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi  317 (363)
T d2c5aa1         240 VEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKK-LPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGL  317 (363)
T ss_dssp             HHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCC-CCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHH
T ss_pred             HHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCC-CceEeCCCCCCccccccCHHHHHHHhCCCCCCCHHHHH
Confidence            99999998865 46688665 69999999999999998842 221   122334567789999998 999998 999999


Q ss_pred             HHHHHHHHHc
Q 020924          306 VDSVESYKKV  315 (319)
Q Consensus       306 ~~~~~~~~~~  315 (319)
                      +++++||+++
T Consensus       318 ~~ti~w~~~~  327 (363)
T d2c5aa1         318 RITYFWIKEQ  327 (363)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=8.7e-47  Score=330.84  Aligned_cols=300  Identities=15%  Similarity=0.214  Sum_probs=234.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC--hhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS--DEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      ||+|||||||||||++|+++|+++|++|.+++++..  ......+...  ...+++++.+|++|.+.+..++..++.|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            689999999999999999999999988766665421  1111122222  246899999999999999999999999999


Q ss_pred             ecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC--------CCCCcccCCCCCCCccc
Q 020924           83 IACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPR--------WPKGQIMDETCWSDKEY  153 (319)
Q Consensus        83 ~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~--------~~~~~~~~E~~~~~~~~  153 (319)
                      +|+...... ..++ ...+++|+.|+.++++++.+.+. ++|++||..+|+..+.        .......+|.++..   
T Consensus        80 ~a~~~~~~~~~~~~-~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~---  154 (346)
T d1oc2a_          80 YAAESHNDNSLNDP-SPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN---  154 (346)
T ss_dssp             CCSCCCHHHHHHCC-HHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC---
T ss_pred             hhhcccccchhhCc-ccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCC---
Confidence            998765432 2344 78899999999999999999886 8899999776543211        01123444444444   


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRD  230 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D  230 (319)
                         |.+.||.+|.++|.+++.+++.++++++++||+++|||..... ..+..++.+...+.+..   .|++.|+|+|++|
T Consensus       155 ---p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D  230 (346)
T d1oc2a_         155 ---PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTND  230 (346)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHH
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhh
Confidence               3788999999999999999998999999999999999865433 45566777777777665   4569999999999


Q ss_pred             HHHHHHHhhccCCCCceEEE-ecccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceeechHHHHH-hCCccc--cHH
Q 020924          231 VAEALLLAYEKAEAEGRYIC-TAHMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVMLTSEKLQK-LGWSYR--SLE  302 (319)
Q Consensus       231 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d~~k~~~-lg~~~~--~~~  302 (319)
                      +|++++.++.++..++.|++ ++...++.++++.+.+.++......    ..+.....+.+|++|+++ |||+|+  +|+
T Consensus       231 ~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~  310 (346)
T d1oc2a_         231 HSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFS  310 (346)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred             HHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHH
Confidence            99999999998888887755 5699999999999999997432222    122333457789999998 999997  699


Q ss_pred             HHHHHHHHHHHHc
Q 020924          303 ETLVDSVESYKKV  315 (319)
Q Consensus       303 ~~l~~~~~~~~~~  315 (319)
                      ++|+++++||++|
T Consensus       311 e~i~~ti~w~~~n  323 (346)
T d1oc2a_         311 EGLEETIQWYTDN  323 (346)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999975

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-46  Score=329.17  Aligned_cols=297  Identities=19%  Similarity=0.163  Sum_probs=224.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      |||||||||||||++|+++|+++|++|++++|.....  .....+...  ..+++++++|++|.+.+.++++  ++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            5799999999999999999999999999998743322  112222222  3589999999999999999998  799999


Q ss_pred             EecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           82 HIACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        82 ~~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |+||...... ..++ ...+++|+.|+.+++++|++.+++++|++||.++|++..    ..+..|+.+.     ..|.++
T Consensus        79 HlAa~~~~~~~~~~~-~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~----~~~~~e~~~~-----~~p~~~  148 (338)
T d1udca_          79 HFAGLKAVGESVQKP-LEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQP----KIPYVESFPT-----GTPQSP  148 (338)
T ss_dssp             ECCSCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCC----SSSBCTTSCC-----CCCSSH
T ss_pred             ECCCccchhhHHhCH-HHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccc----cccccccccc-----CCCcch
Confidence            9999755332 2244 688999999999999999999999999999977665442    3334444322     123788


Q ss_pred             HHhhHHHHHHHHHHhhhh-CCceEEEEecCcccCCCCCCCC---------CccHHHHHHHHhcC-ccc---------cCC
Q 020924          161 YCLSKTEAESEALEFGKK-TGLDVVTICPNLVLGPLLQSKV---------NTSSLVLIKLLKEG-YES---------LEN  220 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~v~G~~~~~~~---------~~~~~~~~~~~~~~-~~~---------~~~  220 (319)
                      |+.+|.++|.++.++..+ .+++++++||+++||+......         ..+..++.....+. ++.         .|.
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~  228 (338)
T d1udca_         149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSS
T ss_pred             HHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCC
Confidence            999999999999976655 5899999999999998654221         22333444443332 221         245


Q ss_pred             cccccccHHHHHHHHHHhhccCCC---CceEEEec-ccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceeechHHHH
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAEA---EGRYICTA-HMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVMLTSEKLQ  292 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d~~k~~  292 (319)
                      +.|||+|++|++.++..+......   .++||+++ .++|+.|+++.+.+.+|. +.+.    ..+.......+|++|++
T Consensus       229 ~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~  307 (338)
T d1udca_         229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASKAD  307 (338)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBCCBCCHHHH
T ss_pred             ceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCC-CCceEECCCCCCCCCEeeECHHHHH
Confidence            789999999999988777654332   34788875 889999999999999873 2221    12233456789999999


Q ss_pred             H-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          293 K-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       293 ~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      + |||+|. +++++|+++++|++++
T Consensus       308 ~~lgwkp~~~l~egi~~ti~w~~~~  332 (338)
T d1udca_         308 RELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHHhc
Confidence            8 999998 9999999999999998

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.1e-46  Score=325.09  Aligned_cols=297  Identities=20%  Similarity=0.160  Sum_probs=232.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~   83 (319)
                      |+|||||||||||++|+++|+++||+|++++|.........++.+. ..++++++.+|++|...+...+..  +++++|+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            6899999999999999999999999999999986654444454443 235799999999999999988764  6788888


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      |+.............+++.|+.|+.+++++|++.+++ +|++.|| .++++..   ...+.+|+++..|      .++|+
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss-~~~~~~~---~~~~~~E~~~~~p------~~~Y~  149 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLI---QAERQDENTPFYP------RSPYG  149 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSC---SSSSBCTTSCCCC------CSHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccc-hhhcCcc---cCCCCCCCCCccc------cChhH
Confidence            8765544222333788999999999999999998865 6666666 5566543   3566788887765      78899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc----cCCcccccccHHHHHHHHH
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES----LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~D~a~~~~  236 (319)
                      .+|.++|.++.+++++++++++++||+++|||......  ..+..++.+...++...    .|++.|+|+|++|+|+++.
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~  229 (321)
T d1rpna_         150 VAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMW  229 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHH
Confidence            99999999999999989999999999999999754432  22344455555544322    3458899999999999999


Q ss_pred             HhhccCCCCceEEE-ecccCCHHHHHHHHHHhCCCC-----CCC--CCCCCCCCceeechHHHHH-hCCccc-cHHHHHH
Q 020924          237 LAYEKAEAEGRYIC-TAHMIRARDLVDKLKSLYPNY-----NYP--KSFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLV  306 (319)
Q Consensus       237 ~~~~~~~~~~~~~~-~~~~~s~~e~~~~~~~~~g~~-----~~~--~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~  306 (319)
                      .+++++.. +.|++ ++...|+.++++.+.+..+..     ...  ...+.....+..|++|+++ |||+|+ +|+|+|+
T Consensus       230 ~~~~~~~~-~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~  308 (321)
T d1rpna_         230 LMLQQDKA-DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIR  308 (321)
T ss_dssp             HHHHSSSC-CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHH
T ss_pred             HHHhcCCc-CCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHH
Confidence            99998754 56655 569999999999999998731     111  1112233557889999998 999998 9999999


Q ss_pred             HHHHHHHH
Q 020924          307 DSVESYKK  314 (319)
Q Consensus       307 ~~~~~~~~  314 (319)
                      ++++|+.+
T Consensus       309 ~tv~~~l~  316 (321)
T d1rpna_         309 MMVEADLR  316 (321)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999875

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.3e-45  Score=319.08  Aligned_cols=300  Identities=16%  Similarity=0.169  Sum_probs=228.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH--HHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN--ARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      |+|||||||||||++|+++|+++|++|+++++.......  ......  ...+++++.+|++|.+.++.+++  ++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            679999999999999999999999999999864332211  111211  24678999999999999999887  789999


Q ss_pred             EecccCCCC-CCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           82 HIACPAPST-TVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        82 ~~a~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |+||..... ...++ ..+..+|+.++.+++++|++.+++++|++||.++|+.....+...+++|+++..|      .++
T Consensus        80 hlAa~~~~~~~~~~~-~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p------~~~  152 (347)
T d1z45a2          80 HFAGLKAVGESTQIP-LRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGP------TNP  152 (347)
T ss_dssp             ECCSCCCHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC------CSH
T ss_pred             EccccccccccccCc-ccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCC------CCh
Confidence            999976543 22233 6788999999999999999999999999999887776555555677888887665      788


Q ss_pred             HHhhHHHHHHHHHHhhhh--CCceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhc--Cccc-cC--------
Q 020924          161 YCLSKTEAESEALEFGKK--TGLDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKE--GYES-LE--------  219 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~--~~~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~--~~~~-~~--------  219 (319)
                      |+.||.++|.+++++.+.  ++++++++||+++||+.....        ...+..++.+...+  .++. .|        
T Consensus       153 Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~  232 (347)
T d1z45a2         153 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  232 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             hHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCC
Confidence            999999999999998653  589999999999999754321        12233333333322  2222 22        


Q ss_pred             CcccccccHHHHHHHHHHhhccCC-------CCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceeec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE-------AEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVMLT  287 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~-------~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d  287 (319)
                      ...+|++++.|++.+++.+++...       ..++||++ +.++|+.|+++.+.+.+|. +.+.    ..+.+.....+|
T Consensus       233 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d  311 (347)
T d1z45a2         233 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRRAGDVLNLTAK  311 (347)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC---------CCCCCBC
T ss_pred             ceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCC-CCceEeCCCCCCCCCEeeEC
Confidence            256889999999999888876421       13368775 6999999999999999983 2222    222334567889


Q ss_pred             hHHHHH-hCCccc-cHHHHHHHHHHHHHHc
Q 020924          288 SEKLQK-LGWSYR-SLEETLVDSVESYKKV  315 (319)
Q Consensus       288 ~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~  315 (319)
                      ++|+++ |||+|. +++|+|+++++|+++|
T Consensus       312 ~sk~~~~lGw~p~~~lee~i~~ti~w~~~n  341 (347)
T d1z45a2         312 PDRAKRELKWQTELQVEDSCKDLWKWTTEN  341 (347)
T ss_dssp             CHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence            999998 999998 9999999999999987

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-45  Score=319.43  Aligned_cols=298  Identities=19%  Similarity=0.126  Sum_probs=222.3

Q ss_pred             CeE-EEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-----ccCCCeEEEEccCCChhhHHHHhc--Cc
Q 020924            6 ERV-CVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-----KASENLKLFKADLLDYDSVKSAIV--GC   77 (319)
Q Consensus         6 ~~v-lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~--~~   77 (319)
                      ||| ||||||||||++|+++|+++||+|++++|..+......++.+.     ....+++++.+|++|.+.+..++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            567 9999999999999999999999999999975432111111111     112478999999999999999986  57


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV---KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~---~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                      ++++|+++.........+...++++|+.|+.+++++|+++++   ++|||+||.++| +.+   ...+++|+++..|   
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vy-g~~---~~~~~~E~~~~~P---  153 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELY-GKV---QEIPQKETTPFYP---  153 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGT-CSC---SSSSBCTTSCCCC---
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchhee-cCC---CCCCCCCCCCCCC---
Confidence            899999986654322233366789999999999999999865   489999996654 443   4678899998766   


Q ss_pred             ccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--C-ccHHHHHHHHhcCccc---cCCcccccccH
Q 020924          155 RTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--N-TSSLVLIKLLKEGYES---LENKLRMIVDV  228 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~-~~~~~~~~~~~~~~~~---~~~~~~~~i~v  228 (319)
                         .++||.||.++|++++.+++.++++++++||+++|||......  . ....++.....+.+..   .|++.|+|+|+
T Consensus       154 ---~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v  230 (347)
T d1t2aa_         154 ---RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  230 (347)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence               7889999999999999999889999999999999999654432  1 1122223333334333   34588999999


Q ss_pred             HHHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCCCCC------------------------CCCCCCCce
Q 020924          229 RDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYNYPK------------------------SFTEKEDEV  284 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~------------------------~~~~~~~~~  284 (319)
                      +|+|+++..++++......+...+...++.+....+....+......                        ..+.....+
T Consensus       231 ~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~  310 (347)
T d1t2aa_         231 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFL  310 (347)
T ss_dssp             HHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBC
T ss_pred             cHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEe
Confidence            99999999999987543333555689999999999988886321000                        011122346


Q ss_pred             eechHHHHH-hCCccc-cHHHHHHHHHHHHH
Q 020924          285 MLTSEKLQK-LGWSYR-SLEETLVDSVESYK  313 (319)
Q Consensus       285 ~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~  313 (319)
                      .+|++|+++ |||+|+ +|+|+|+++++|..
T Consensus       311 ~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~  341 (347)
T d1t2aa_         311 QGDCTKAKQKLNWKPRVAFDELVREMVHADV  341 (347)
T ss_dssp             CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             eECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence            679999998 999998 99999999986543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-44  Score=316.36  Aligned_cols=302  Identities=18%  Similarity=0.271  Sum_probs=228.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH-HhcCcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS-AIVGCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vi~~   83 (319)
                      |||||||||||||++++++|+++| ++|+++++......  .+.    ..++++++.+|+++.+.+.+ +.+++|+|||+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~--~~~----~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~   74 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS--RFL----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG--GGT----TCTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchh--hhc----cCCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence            479999999999999999999999 58999987654211  111    13689999999998866655 66789999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCc-cccccCCchHH
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK-EYCRTTNNWYC  162 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~-~~~~~~~~~Y~  162 (319)
                      |+..........+...+++|+.|+.+++++|.+.++ +++++||..+++...    ....+|..+..+ +....|.+.|+
T Consensus        75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~Y~  149 (342)
T d2blla1          75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCS----DKYFDEDHSNLIVGPVNKPRWIYS  149 (342)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCC----CSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             cccccccccccCCccccccccccccccccccccccc-ccccccccccccccc----ccccccccccccccccCCCcchhh
Confidence            997654321222267899999999999999999987 667788866666542    344444433222 12234578899


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC-------CCccHHHHHHHHhcCccc---cCCcccccccHHHHH
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK-------VNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVA  232 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a  232 (319)
                      .||.++|.++..+++.++++++++||+.+||+.....       ......++.+++.|++..   .|++.|+|+|++|+|
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~  229 (342)
T d2blla1         150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI  229 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHH
T ss_pred             hcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccc
Confidence            9999999999999999999999999999999864432       124567778888888766   356899999999999


Q ss_pred             HHHHHhhccCC--C-CceEEEe-c-ccCCHHHHHHHHHHhCCCCCCCCCC------------------CCCCCceeechH
Q 020924          233 EALLLAYEKAE--A-EGRYICT-A-HMIRARDLVDKLKSLYPNYNYPKSF------------------TEKEDEVMLTSE  289 (319)
Q Consensus       233 ~~~~~~~~~~~--~-~~~~~~~-~-~~~s~~e~~~~~~~~~g~~~~~~~~------------------~~~~~~~~~d~~  289 (319)
                      +++..+++++.  . +++||++ + ..+|++|+++.+.+.++........                  .........|++
T Consensus       230 ~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  309 (342)
T d2blla1         230 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR  309 (342)
T ss_dssp             HHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCH
T ss_pred             ceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHH
Confidence            99999998743  2 3489885 5 4589999999999987522111100                  011133567999


Q ss_pred             HHHH-hCCccc-cHHHHHHHHHHHHHHcCCC
Q 020924          290 KLQK-LGWSYR-SLEETLVDSVESYKKVGIL  318 (319)
Q Consensus       290 k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~~  318 (319)
                      |+++ |||+|+ +++|+|+++++||+++.-|
T Consensus       310 k~~~~lgw~P~~sleegl~~ti~~y~~~~~~  340 (342)
T d2blla1         310 NAHRCLDWEPKIDMQETIDETLDFFLRTVDL  340 (342)
T ss_dssp             HHHHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHCCCcCCCHHHHHHHHHHHHHhCcCC
Confidence            9998 999998 9999999999999988655

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.3e-45  Score=318.07  Aligned_cols=300  Identities=17%  Similarity=0.128  Sum_probs=227.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-----ccCCCeEEEEccCCChhhHHHHhc--Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-----KASENLKLFKADLLDYDSVKSAIV--GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~--~~   77 (319)
                      +|++||||||||||+||+++|+++||+|++++|..+......+..+.     .....++++.+|+++.+.+...++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            47999999999999999999999999999999965421111111111     113468899999999999999886  67


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccCCCCCCCcc
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKE  152 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  152 (319)
                      |+|||+|+........+.+...++.|+.++.++++++++.     ...++++.||.. +++.    ...+.+|++|..| 
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-~~~~----~~~~~~E~~~~~p-  154 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGS----TPPPQSETTPFHP-  154 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTT----SCSSBCTTSCCCC-
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccce-eccc----CCCCCCCCCCCCC-
Confidence            9999999976543222223678899999999999999864     334777777744 4433    2567889988766 


Q ss_pred             ccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccc--c--CCcccccc
Q 020924          153 YCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYES--L--ENKLRMIV  226 (319)
Q Consensus       153 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i  226 (319)
                           .+.|+.+|..+|.++..+++.++++++++||+++|||......  ..+...+.+...+....  .  +.+.|||+
T Consensus       155 -----~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~  229 (339)
T d1n7ha_         155 -----RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG  229 (339)
T ss_dssp             -----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred             -----cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccce
Confidence                 8889999999999999999999999999999999999754332  12223333333443322  3  45899999


Q ss_pred             cHHHHHHHHHHhhccCCCCceEEEecccCCHHHHHHHHHHhCCCCC-------CCCCCCCCCCceeechHHHHH-hCCcc
Q 020924          227 DVRDVAEALLLAYEKAEAEGRYICTAHMIRARDLVDKLKSLYPNYN-------YPKSFTEKEDEVMLTSEKLQK-LGWSY  298 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~-------~~~~~~~~~~~~~~d~~k~~~-lg~~~  298 (319)
                      |++|+|+++..+++++...+.++..+...++.++++.+.+.++...       .....+.....+..|++|+++ |||+|
T Consensus       230 ~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P  309 (339)
T d1n7ha_         230 FAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKP  309 (339)
T ss_dssp             EHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCC
T ss_pred             eeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCc
Confidence            9999999999999988766667778899999999999999997311       111222333557789999998 99999


Q ss_pred             c-cHHHHHHHHHHHHHHc
Q 020924          299 R-SLEETLVDSVESYKKV  315 (319)
Q Consensus       299 ~-~~~~~l~~~~~~~~~~  315 (319)
                      + +|+++|+++++||.+.
T Consensus       310 ~~~le~gi~~ti~~~~~~  327 (339)
T d1n7ha_         310 QVGFEKLVKMMVDEDLEL  327 (339)
T ss_dssp             CSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            8 9999999999999753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-44  Score=311.65  Aligned_cols=298  Identities=18%  Similarity=0.157  Sum_probs=221.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh--------hhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD--------EKNARLYELEKASENLKLFKADLLDYDSVKSAIVG-   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   76 (319)
                      |||||||||||||++|+++|+++|++|++++|....        .....+...  ...+++++.+|++|.+.+..++.+ 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeecccccccccccccc
Confidence            689999999999999999999999999999752111        111222222  246899999999999999998864 


Q ss_pred             -cceEEEecccCCCCCC-CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCcccc
Q 020924           77 -CNGVFHIACPAPSTTV-PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYC  154 (319)
Q Consensus        77 -~d~vi~~a~~~~~~~~-~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  154 (319)
                       +++++|+||....... .+| ...+++|+.++.++++++++.++++|||+||..+++....   .....+....     
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p-~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~---~~~~~~~~~~-----  151 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKP-LDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQY---LPLDEAHPTG-----  151 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSS---SSBCTTSCCC-----
T ss_pred             ccccccccccccCcHhhHhCH-HHHHHhhhcccccccchhhhcCcccccccccceeeecccc---cccccccccc-----
Confidence             6789999997654322 244 6789999999999999999999999999999776654431   1122222212     


Q ss_pred             ccCCchHHhhHHHHHHHHHHhhhh-CCceEEEEecCcccCCCCCCC--------C-CccHHHHHHHHhcC-ccc------
Q 020924          155 RTTNNWYCLSKTEAESEALEFGKK-TGLDVVTICPNLVLGPLLQSK--------V-NTSSLVLIKLLKEG-YES------  217 (319)
Q Consensus       155 ~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~v~G~~~~~~--------~-~~~~~~~~~~~~~~-~~~------  217 (319)
                       .+.++|+.+|..+|..+.++++. .+++.+++||+++||+.....        . ..+..++..+.... ++.      
T Consensus       152 -~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~  230 (346)
T d1ek6a_         152 -GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY  230 (346)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             -ccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcc
Confidence             23678999999999999998765 589999999999999864321        1 12333333333322 211      


Q ss_pred             ---cCCcccccccHHHHHHHHHHhhccCC---CCceEEEe-cccCCHHHHHHHHHHhCCCCCCCC----CCCCCCCceee
Q 020924          218 ---LENKLRMIVDVRDVAEALLLAYEKAE---AEGRYICT-AHMIRARDLVDKLKSLYPNYNYPK----SFTEKEDEVML  286 (319)
Q Consensus       218 ---~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~----~~~~~~~~~~~  286 (319)
                         .|.+.|||+|++|+|.++..++....   ..++||++ +...++.|+++.+.+.+|. +.+.    ..+.+.....+
T Consensus       231 ~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~-~~~~~~~~~~~~e~~~~~~  309 (346)
T d1ek6a_         231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVARREGDVAACYA  309 (346)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCSEECB
T ss_pred             cCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCC-CCCeEECCCCCCCCCEeeE
Confidence               34478999999999999988765432   23478776 5899999999999999983 2222    12333456788


Q ss_pred             chHHHHH-hCCccc-cHHHHHHHHHHHHHHcC
Q 020924          287 TSEKLQK-LGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       287 d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                      |++|+++ |||+|+ +++|+|+++++||++|-
T Consensus       310 d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~  341 (346)
T d1ek6a_         310 NPSLAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (346)
T ss_dssp             CCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             CHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCH
Confidence            9999999 999999 99999999999999873

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.5e-44  Score=317.02  Aligned_cols=311  Identities=15%  Similarity=0.165  Sum_probs=225.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcC---------------CChhhHHHHHhhh-ccCCCeEEEEccCCChh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTARE---------------PSDEKNARLYELE-KASENLKLFKADLLDYD   68 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~   68 (319)
                      ||||||||||||||++|+++|+++||+|++++.-               +.......+.... ..+.+++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            6899999999999999999999999999998621               1111111111111 12467999999999999


Q ss_pred             hHHHHhc--CcceEEEecccCCCC-CCCCc--cchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCC--
Q 020924           69 SVKSAIV--GCNGVFHIACPAPST-TVPNP--QMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWPKG--  140 (319)
Q Consensus        69 ~~~~~~~--~~d~vi~~a~~~~~~-~~~~~--~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~--  140 (319)
                      .+..+++  ++|+|||+||..... ...++  ...++++|+.|+.+++++|++.+++ ++++.|| .++++....+..  
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss-~~~~~~~~~~~~~~  159 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGT-MGEYGTPNIDIEEG  159 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECC-GGGGCCCSSCBCSS
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccc-cccccccccccccc
Confidence            9999997  579999999876543 11221  2467899999999999999998776 4566555 555554321111  


Q ss_pred             -cccCCCCCC-CccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC----------------CCc
Q 020924          141 -QIMDETCWS-DKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK----------------VNT  202 (319)
Q Consensus       141 -~~~~E~~~~-~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~----------------~~~  202 (319)
                       ....|+... ....+..|.++|+.||.++|.++..++++++++++++||+++||+.....                ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  239 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  239 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence             111111110 01123345788999999999999999999999999999999999875321                123


Q ss_pred             cHHHHHHHHhcCccc-c--CCcccccccHHHHHHHHHHhhccCCCCceE---EEecccCCHHHHHHHHHHhCCCCC--CC
Q 020924          203 SSLVLIKLLKEGYES-L--ENKLRMIVDVRDVAEALLLAYEKAEAEGRY---ICTAHMIRARDLVDKLKSLYPNYN--YP  274 (319)
Q Consensus       203 ~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~---~~~~~~~s~~e~~~~~~~~~g~~~--~~  274 (319)
                      +..++.+...++++. +  |.+.|||+|++|+|+++..++++....+.+   ++++..+|+.|+++++.+..+...  ++
T Consensus       240 i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~  319 (393)
T d1i24a_         240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVK  319 (393)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCC
T ss_pred             hhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcc
Confidence            566778888888776 3  458899999999999999999987776643   345688999999999988764221  11


Q ss_pred             C------CCCCCCCceeechHHHHHhCCccc-cHHHHHHHHHHHHHHcC
Q 020924          275 K------SFTEKEDEVMLTSEKLQKLGWSYR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       275 ~------~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~~~~~  316 (319)
                      .      ..+.....+..|++|+++|||+|+ +++++++++++|+++++
T Consensus       320 ~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k  368 (393)
T d1i24a_         320 KMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFK  368 (393)
T ss_dssp             EEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred             eeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHHH
Confidence            1      111223456789999999999999 99999999999998764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.7e-44  Score=308.45  Aligned_cols=286  Identities=18%  Similarity=0.188  Sum_probs=218.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   82 (319)
                      +|||||||||||||++|+++|+++|+.|+++++..+                     .|+++.+.+...++  .+|.|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------------~~~~~~~~~~~~~~~~~~d~v~~   60 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------LNLLDSRAVHDFFASERIDQVYL   60 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------------ccccCHHHHHHHHhhcCCCEEEE
Confidence            579999999999999999999999999987654322                     58999999998876  5899999


Q ss_pred             ecccCCCCC-CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           83 IACPAPSTT-VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        83 ~a~~~~~~~-~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      +|+...... ...+....+++|+.++.+++++|++.++++|||+||.++|++.    ...+++|+.+.... +..+.++|
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~----~~~~~~E~~~~~~~-~~~~~~~Y  135 (315)
T d1e6ua_          61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKL----AKQPMAESELLQGT-LEPTNEPY  135 (315)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTT----CCSSBCGGGTTSSC-CCGGGHHH
T ss_pred             cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCC----CCCCccCCccccCC-CCCCCCHH
Confidence            997654321 1122256789999999999999999999999999998776544    35677887655432 22236789


Q ss_pred             HhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC---CccHHH-----HHHHHhcCccc---cCCcccccccHHH
Q 020924          162 CLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV---NTSSLV-----LIKLLKEGYES---LENKLRMIVDVRD  230 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~---~~~~~~-----~~~~~~~~~~~---~~~~~~~~i~v~D  230 (319)
                      +.||.++|.+++.+++++|++++++||+++|||+.....   ......     ......+....   .|.+.++|+|++|
T Consensus       136 ~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d  215 (315)
T d1e6ua_         136 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD  215 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeeh
Confidence            999999999999999989999999999999999765432   111111     22333444433   3458899999999


Q ss_pred             HHHHHHHhhccCCC---------CceEEE-ecccCCHHHHHHHHHHhCCCCCC---CCCCCCCCCceeechHHHHHhCCc
Q 020924          231 VAEALLLAYEKAEA---------EGRYIC-TAHMIRARDLVDKLKSLYPNYNY---PKSFTEKEDEVMLTSEKLQKLGWS  297 (319)
Q Consensus       231 ~a~~~~~~~~~~~~---------~~~~~~-~~~~~s~~e~~~~~~~~~g~~~~---~~~~~~~~~~~~~d~~k~~~lg~~  297 (319)
                      +++++..++.....         .+.++. ++...++.++++.+.+..|....   ....+.......+|++|+++|||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k~Lg~~  295 (315)
T d1e6ua_         216 MAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWY  295 (315)
T ss_dssp             HHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTCC
T ss_pred             hHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHHHcCCC
Confidence            99999999865421         234554 46889999999999999873211   122233445578999999889999


Q ss_pred             cc-cHHHHHHHHHHHHHHcC
Q 020924          298 YR-SLEETLVDSVESYKKVG  316 (319)
Q Consensus       298 ~~-~~~~~l~~~~~~~~~~~  316 (319)
                      |+ +|+|+|+++++||++|.
T Consensus       296 p~~~l~e~i~~ti~w~~~N~  315 (315)
T d1e6ua_         296 HEISLEAGLASTYQWFLENQ  315 (315)
T ss_dssp             CCCCHHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHHHcC
Confidence            98 99999999999999874

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1e-42  Score=308.92  Aligned_cols=304  Identities=17%  Similarity=0.187  Sum_probs=223.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCCCh--------hhHHHHHhhh--------ccCCCeEEEEccCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREPSD--------EKNARLYELE--------KASENLKLFKADLLDY   67 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~--------~~~~~~~~~~--------~~~~~~~~~~~Dl~~~   67 (319)
                      .|||||||||||||++|+++|++ .||+|+++++-...        ........+.        .....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46899999999999999999986 78999999741110        0111111111        0134688999999999


Q ss_pred             hhHHHHhc---CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC---CCCCc
Q 020924           68 DSVKSAIV---GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPR---WPKGQ  141 (319)
Q Consensus        68 ~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~---~~~~~  141 (319)
                      +.+.++++   ++|+|||+|+..............+++|+.++.++++++++.++++++++||...++....   .....
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99999886   5799999999765432222336788999999999999999999999999999776654421   11223


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--------CccHHHHHHHHhc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--------NTSSLVLIKLLKE  213 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--------~~~~~~~~~~~~~  213 (319)
                      ++.|+++..      |.++|+.+|...|.+++.+.+.++++++++||+++||+......        ..++.++.+++.+
T Consensus       162 ~~~e~~~~~------p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~  235 (383)
T d1gy8a_         162 PIDINAKKS------PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD  235 (383)
T ss_dssp             CBCTTSCCB------CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHH
T ss_pred             ccccccCCC------CCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhh
Confidence            455555444      48999999999999999999989999999999999999865432        1223333433321


Q ss_pred             ----------------Cccc---------cCCcccccccHHHHHHHHHHhhccC---------CCCceEEEe-cccCCHH
Q 020924          214 ----------------GYES---------LENKLRMIVDVRDVAEALLLAYEKA---------EAEGRYICT-AHMIRAR  258 (319)
Q Consensus       214 ----------------~~~~---------~~~~~~~~i~v~D~a~~~~~~~~~~---------~~~~~~~~~-~~~~s~~  258 (319)
                                      .++.         .|.+.|||+|++|+|++++.+++..         ...++||++ +.++|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~  315 (383)
T d1gy8a_         236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (383)
T ss_dssp             HSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             ccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHH
Confidence                            1111         2457799999999999999988642         122378775 6899999


Q ss_pred             HHHHHHHHhCCCCCCCC----CCCCCCCceeechHHHHH-hCCccc-cHHHHHHHH-HHHHHHc
Q 020924          259 DLVDKLKSLYPNYNYPK----SFTEKEDEVMLTSEKLQK-LGWSYR-SLEETLVDS-VESYKKV  315 (319)
Q Consensus       259 e~~~~~~~~~g~~~~~~----~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~-~~~~~~~  315 (319)
                      |+++.+.+.+|. +.+.    ..+.+.....+|++|+++ |||+|+ +++|+|+++ ++|++.+
T Consensus       316 el~~~i~~~~~~-~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         316 EVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             HHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCC-CCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            999999999873 2221    122234567889999999 999999 999999886 6899877

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=2.3e-42  Score=302.06  Aligned_cols=305  Identities=29%  Similarity=0.370  Sum_probs=228.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHH-HHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNA-RLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      ++|+|||||||||||++|+++|+++|++|+++.|+..+.... ..............+.+|++|.+.+..++.++|+|+|
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            579999999999999999999999999999999976532211 1111111223345677999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCcccCCCCCC----------Cc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS----------DK  151 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~----------~~  151 (319)
                      +++.....   ......++.|+.|+.+++++|++. ++++|||+||..+++...........+|+.+.          .+
T Consensus        90 ~a~~~~~~---~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e  166 (342)
T d1y1pa1          90 IASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE  166 (342)
T ss_dssp             CCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred             hccccccc---ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccc
Confidence            99876542   333678899999999999999987 68999999997665543222223444444321          12


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCC--CCccHHHHHHHHhcCccc--cCCccccc
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSK--VNTSSLVLIKLLKEGYES--LENKLRMI  225 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~  225 (319)
                      ..+..|.++|+.+|..+|.+++.+++++  +++++++||+.+|||...+.  ...+..++.++.++....  .+++.++|
T Consensus       167 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~  246 (342)
T d1y1pa1         167 SDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY  246 (342)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEE
T ss_pred             cCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceee
Confidence            2233346789999999999999998765  57889999999999865433  235566777777777555  45677899


Q ss_pred             ccHHHHHHHHHHhhccCCCCceE-EEecccCCHHHHHHHHHHhCCCCCCCCCCCCCC-Ccee----echHHHHHhCCccc
Q 020924          226 VDVRDVAEALLLAYEKAEAEGRY-ICTAHMIRARDLVDKLKSLYPNYNYPKSFTEKE-DEVM----LTSEKLQKLGWSYR  299 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-~~~~----~d~~k~~~lg~~~~  299 (319)
                      +|++|+|++++.+++++...+.| +++++..|+.|+++++.+.+|...++...+... ....    .+.++++.|||.+.
T Consensus       247 v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~lg~~~~  326 (342)
T d1y1pa1         247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGW  326 (342)
T ss_dssp             EEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCCSC
T ss_pred             eeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHHHHcCCCCC
Confidence            99999999999999987777754 666799999999999999998766665544332 2222    33455566999987


Q ss_pred             -cHHHHHHHHHHH
Q 020924          300 -SLEETLVDSVES  311 (319)
Q Consensus       300 -~~~~~l~~~~~~  311 (319)
                       +++++|+++++.
T Consensus       327 ~~lee~i~d~I~s  339 (342)
T d1y1pa1         327 RSIEESIKDLVGS  339 (342)
T ss_dssp             CCHHHHHHHHHCC
T ss_pred             cCHHHHHHHHHHh
Confidence             999999999864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.6e-41  Score=295.98  Aligned_cols=301  Identities=17%  Similarity=0.161  Sum_probs=225.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC--cceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVG--CNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a   84 (319)
                      ||||||||||||++|+++|+++|++|+++++-........+..+. ..++++++.+|++|.+.+..++++  +|+|||+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            799999999999999999999999999988644333333333332 246899999999999999999875  69999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCC-------------cccCCCCCCCc
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKG-------------QIMDETCWSDK  151 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~-------------~~~~E~~~~~~  151 (319)
                      +..........+...+++|+.|+.+|+++|.+.+++++|+.||..++++.+.....             ....+.++   
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  157 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ---  157 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC---
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCc---
Confidence            87654322222378899999999999999999998888888887777765421100             11112222   


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCC--CccHHHHHHHHh-----cCccc---cCCc
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLK-----EGYES---LENK  221 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~-----~~~~~---~~~~  221 (319)
                         ..+.+.|+.+|...|.++....+.++....++|++++|++......  ..+..++..+.+     ++++.   .|++
T Consensus       158 ---~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  234 (338)
T d1orra_         158 ---LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ  234 (338)
T ss_dssp             ---CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCC
T ss_pred             ---cccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCce
Confidence               2347889999999999999999989999999999999976543332  334455555443     33343   3458


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCceEEEe---cccCCHHHHHHHHHHhCCCC-CCC--CCCCCCCCceeechHHHHH
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEGRYICT---AHMIRARDLVDKLKSLYPNY-NYP--KSFTEKEDEVMLTSEKLQK  293 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~---~~~~s~~e~~~~~~~~~g~~-~~~--~~~~~~~~~~~~d~~k~~~  293 (319)
                      .|+|+|++|+|++++.++++..  .+.+|++.   +..+++.|+++.+.+..+.. ++.  ...+.....+.+|++|+++
T Consensus       235 ~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  314 (338)
T d1orra_         235 VRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITN  314 (338)
T ss_dssp             EEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHH
T ss_pred             eEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHHHHH
Confidence            8999999999999999997643  24467663   47889999999999998732 111  1222334557789999998


Q ss_pred             -hCCccc-cHHHHHHHHHHHHHH
Q 020924          294 -LGWSYR-SLEETLVDSVESYKK  314 (319)
Q Consensus       294 -lg~~~~-~~~~~l~~~~~~~~~  314 (319)
                       |||+|+ +++++|+++++|++.
T Consensus       315 ~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         315 AIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             HHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHCCCcCCCHHHHHHHHHHHHHc
Confidence             999998 999999999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=9.1e-42  Score=299.87  Aligned_cols=300  Identities=19%  Similarity=0.160  Sum_probs=224.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      ++|||||||||||||++|+++|+++|++|++++|+........ +.. ...++++++.+|++|.+.+.++++  .+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~-~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF-ETA-RVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH-HHT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHH-hhh-hcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            6799999999999999999999999999999999876432211 111 123579999999999999999887  579999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      |+|+........+.+...+++|+.++.++++++++.+.. .+++.|| +.++....  ...+.+|+.+..|      .++
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~-~~~~~~~~--~~~~~~~~~~~~p------~~~  155 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS-DKCYDNKE--WIWGYRENEAMGG------YDP  155 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC-GGGBCCCC--SSSCBCTTSCBCC------SSH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccc-cccccccc--cccccccccccCC------CCc
Confidence            999876543222233788999999999999999987654 4555544 54544432  3456666665554      788


Q ss_pred             HHhhHHHHHHHHHHhhh---------hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc--cCCcccccccHH
Q 020924          161 YCLSKTEAESEALEFGK---------KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES--LENKLRMIVDVR  229 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~---------~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~  229 (319)
                      |+.+|...|..+..++.         .+++.++++||+++|||++.....++..+++....+.+..  .+++.++|+|++
T Consensus       156 y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~  235 (356)
T d1rkxa_         156 YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVL  235 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETH
T ss_pred             cccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccc
Confidence            99999999988887655         3478899999999999986554455566666666555554  455889999999


Q ss_pred             HHHHHHHHhhccCCCCc-----eEE--E-ecccCCHHHHHHHHHHhCCCC-CCC---CCCCCCCCceeechHHHHH-hCC
Q 020924          230 DVAEALLLAYEKAEAEG-----RYI--C-TAHMIRARDLVDKLKSLYPNY-NYP---KSFTEKEDEVMLTSEKLQK-LGW  296 (319)
Q Consensus       230 D~a~~~~~~~~~~~~~~-----~~~--~-~~~~~s~~e~~~~~~~~~g~~-~~~---~~~~~~~~~~~~d~~k~~~-lg~  296 (319)
                      |+|.++..++......+     ..+  . .+...++.++++.+.+.++.. .+.   ...+.+...+.+|++|+++ |||
T Consensus       236 D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw  315 (356)
T d1rkxa_         236 EPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGW  315 (356)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCC
T ss_pred             cccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCC
Confidence            99999999887644322     122  2 247889999999999999732 111   1122334557899999998 999


Q ss_pred             ccc-cHHHHHHHHHHHHHH
Q 020924          297 SYR-SLEETLVDSVESYKK  314 (319)
Q Consensus       297 ~~~-~~~~~l~~~~~~~~~  314 (319)
                      +|+ +|+++|+++++||++
T Consensus       316 ~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         316 HPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CCCCCHHHHHHHHHHHHHH
T ss_pred             CcCCCHHHHHHHHHHHHHH
Confidence            998 999999999999986

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=7.2e-38  Score=265.89  Aligned_cols=266  Identities=15%  Similarity=0.109  Sum_probs=211.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |||||||||||||++|+++|.++||+|++++|+.                      +|++|.+.++++++  ++|+|||+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~~~d~vih~   59 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEKKPNVVINC   59 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence            5799999999999999999999999999998753                      48999999999987  57999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      |+..........+......|+.....+.+.++..+. ++++.||..+++..    ...+.+|+++..+      .+.|+.
T Consensus        60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~----~~~~~~e~~~~~~------~~~~~~  128 (281)
T d1vl0a_          60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGE----AKEPITEFDEVNP------QSAYGK  128 (281)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSC----CSSCBCTTSCCCC------CSHHHH
T ss_pred             ccccccccccccchhhcccccccccccccccccccc-cccccccceeeecc----ccccccccccccc------hhhhhh
Confidence            987654322223367788999999999998887775 77888886655443    3567788876655      678999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhccC
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      +|...|.++++.    +.+++++||+++||++.+    ....++.....+.... .+++.++|+|++|+|+++..++++.
T Consensus       129 ~k~~~e~~~~~~----~~~~~i~R~~~vyG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~  200 (281)
T d1vl0a_         129 TKLEGENFVKAL----NPKYYIVRTAWLYGDGNN----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK  200 (281)
T ss_dssp             HHHHHHHHHHHH----CSSEEEEEECSEESSSSC----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             hhhHHHHHHHHh----CCCccccceeEEeCCCcc----cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhc
Confidence            999999887664    788999999999999743    4556667777776655 7789999999999999999999887


Q ss_pred             CCCceEEE-ecccCCHHHHHHHHHHhCCCC----CCCCC-CCC--CC-CceeechHHHHH-hCCccccHHHHHHHHHHHH
Q 020924          243 EAEGRYIC-TAHMIRARDLVDKLKSLYPNY----NYPKS-FTE--KE-DEVMLTSEKLQK-LGWSYRSLEETLVDSVESY  312 (319)
Q Consensus       243 ~~~~~~~~-~~~~~s~~e~~~~~~~~~g~~----~~~~~-~~~--~~-~~~~~d~~k~~~-lg~~~~~~~~~l~~~~~~~  312 (319)
                      .. |.|++ +++.+|+.|+++.+.+.+|..    +++.. .+.  .+ ....+|++|+++ |||+|.+|+++|+++++++
T Consensus       201 ~~-g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l  279 (281)
T d1vl0a_         201 NY-GTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLL  279 (281)
T ss_dssp             CC-EEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHH
T ss_pred             cc-CceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCCCHHHHHHHHHHHh
Confidence            54 67755 569999999999999999731    11111 111  11 234589999999 9999999999999999998


Q ss_pred             H
Q 020924          313 K  313 (319)
Q Consensus       313 ~  313 (319)
                      +
T Consensus       280 ~  280 (281)
T d1vl0a_         280 Q  280 (281)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-36  Score=260.64  Aligned_cols=282  Identities=17%  Similarity=0.130  Sum_probs=191.6

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH-H-----hcCcceE
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS-A-----IVGCNGV   80 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~-----~~~~d~v   80 (319)
                      |||||||||||++|+++|+++|+ +|+++++-........+.+.         ...|..+.+.+.. .     +..+++|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL---------NIADYMDKEDFLIQIMAGEEFGDVEAI   72 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS---------CCSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccccc---------chhhhccchHHHHHHhhhhcccchhhh
Confidence            89999999999999999999995 79988754443222222221         1123333333222 2     2357899


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      +|+|+.....  ..+.....+.|+.++.+++++++..+++ +|+.||..++++..    .....|+.+.      .+.+.
T Consensus        73 ~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~----~~~~~~~~~~------~~~~~  139 (307)
T d1eq2a_          73 FHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRT----SDFIESREYE------KPLNV  139 (307)
T ss_dssp             EECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCC----SCBCSSGGGC------CCSSH
T ss_pred             hhhccccccc--cccccccccccccccccccccccccccc-cccccccccccccc----cccccccccc------ccccc
Confidence            9999865543  2333677889999999999999999985 66666656665542    3333443332      23788


Q ss_pred             HHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccc--cC--CcccccccHHHHHH
Q 020924          161 YCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYES--LE--NKLRMIVDVRDVAE  233 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~  233 (319)
                      |+.+|..+|.++..++++++++++++||+++|||.....   ......+...+..++...  .|  ...|+|+|++|+++
T Consensus       140 Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~  219 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             cccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHH
Confidence            999999999999999999999999999999999976433   123344445555555433  23  37899999999999


Q ss_pred             HHHHhhccCCCCceEEE-ecccCCHHHHHHHHHHhCCCCCCC-----CCCC-CCCCceeechHHHHH-hCCccc-cHHHH
Q 020924          234 ALLLAYEKAEAEGRYIC-TAHMIRARDLVDKLKSLYPNYNYP-----KSFT-EKEDEVMLTSEKLQK-LGWSYR-SLEET  304 (319)
Q Consensus       234 ~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~~~~~~g~~~~~-----~~~~-~~~~~~~~d~~k~~~-lg~~~~-~~~~~  304 (319)
                      ++..++++.. .+.|++ ++...|++|+++++.+..+...+.     .... ........|++|+++ +||+|. +++|+
T Consensus       220 ~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~eg  298 (307)
T d1eq2a_         220 VNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEG  298 (307)
T ss_dssp             HHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHH
T ss_pred             HHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHH
Confidence            9999998764 457765 579999999999998877632221     1111 112335679999999 899998 99999


Q ss_pred             HHHHHHHH
Q 020924          305 LVDSVESY  312 (319)
Q Consensus       305 l~~~~~~~  312 (319)
                      |+++++|+
T Consensus       299 i~~~i~w~  306 (307)
T d1eq2a_         299 VTEYMAWL  306 (307)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhC
Confidence            99999996

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=3.1e-35  Score=251.37  Aligned_cols=272  Identities=13%  Similarity=0.054  Sum_probs=199.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEEEe
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVFHI   83 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   83 (319)
                      |||||||||||||++|+++|.++|+.| ++.++...                  +.+|++|.+.++++++  ++|+|||+
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~   61 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------------FCGDFSNPKGVAETVRKLRPDVIVNA   61 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence            579999999999999999999988755 44544321                  2379999999999987  56999999


Q ss_pred             cccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHh
Q 020924           84 ACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCL  163 (319)
Q Consensus        84 a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  163 (319)
                      ||........+.+...+++|+.++.++++++++.++ +++++||...+++.    ...+.+|+++..|      .+.|+.
T Consensus        62 Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~----~~~~~~E~~~~~p------~~~y~~  130 (298)
T d1n2sa_          62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGT----GDIPWQETDATSP------LNVYGK  130 (298)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCC----TTCCBCTTSCCCC------SSHHHH
T ss_pred             cccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCC----CCCCCccccccCC------CchHhh
Confidence            997654433333478899999999999999988886 78888887666544    4678889887665      788999


Q ss_pred             hHHHHHHHHHHhhhhCCceEEEEecCccc-CCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhhc-
Q 020924          164 SKTEAESEALEFGKKTGLDVVTICPNLVL-GPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAYE-  240 (319)
Q Consensus       164 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~-  240 (319)
                      +|..+|..+++...    ...++|++..+ |++..    ....+...+..+.... .++..++++|+.|+++++..++. 
T Consensus       131 ~k~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~  202 (298)
T d1n2sa_         131 TKLAGEKALQDNCP----KHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (298)
T ss_dssp             HHHHHHHHHHHHCS----SEEEEEECSEECSSSCC----HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHhhhc----ccccccccceeeccCCc----cchhhhhhhcccceeecccceeecccccchHHHHHHHHHhh
Confidence            99999998887643    34556655555 44322    2233444444554444 55678899999999999988775 


Q ss_pred             ---cCCCCceEEEec-ccCCHHHHHHHHHHhCCC--CCCCCC---------C--CCC-CCceeechHHHHH-hCCccccH
Q 020924          241 ---KAEAEGRYICTA-HMIRARDLVDKLKSLYPN--YNYPKS---------F--TEK-EDEVMLTSEKLQK-LGWSYRSL  301 (319)
Q Consensus       241 ---~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~--~~~~~~---------~--~~~-~~~~~~d~~k~~~-lg~~~~~~  301 (319)
                         .....++||+++ ..++..++++.+.+..+.  ...+..         .  +.. .....+|++|+++ |||+|.+|
T Consensus       203 ~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~~~  282 (298)
T d1n2sa_         203 ALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQW  282 (298)
T ss_dssp             HHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBH
T ss_pred             hhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCCcH
Confidence               334456888775 899999999998876531  111100         0  001 1234689999998 99999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020924          302 EETLVDSVESYKKV  315 (319)
Q Consensus       302 ~~~l~~~~~~~~~~  315 (319)
                      +++|+++++++.++
T Consensus       283 ~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         283 ELGVKRMLTEMFTT  296 (298)
T ss_dssp             HHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-30  Score=209.98  Aligned_cols=201  Identities=15%  Similarity=0.162  Sum_probs=155.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |.||||+||||||+||++++++|+++||+|+++.|++++...       ....+++++.+|++|.+++.++++++|+|||
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~   73 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------ccccccccccccccchhhHHHHhcCCCEEEE
Confidence            445799999999999999999999999999999998764211       1135789999999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      ++|....       ....+++..++.++++++++++++|||++||...++.....+                 .....|.
T Consensus        74 ~~g~~~~-------~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~-----------------~~~~~~~  129 (205)
T d1hdoa_          74 LLGTRND-------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-----------------PRLQAVT  129 (205)
T ss_dssp             CCCCTTC-------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-----------------GGGHHHH
T ss_pred             EeccCCc-------hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc-----------------ccccccc
Confidence            9986433       233467889999999999999999999999966554322100                 1135688


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..|..+|+.+++    .+++++++||+.+++........             ....+.....+|+++|+|++++.+++++
T Consensus       130 ~~~~~~e~~l~~----~~~~~tiirp~~~~~~~~~~~~~-------------~~~~~~~~~~~i~~~DvA~~~~~~l~~~  192 (205)
T d1hdoa_         130 DDHIRMHKVLRE----SGLKYVAVMPPHIGDQPLTGAYT-------------VTLDGRGPSRVISKHDLGHFMLRCLTTD  192 (205)
T ss_dssp             HHHHHHHHHHHH----TCSEEEEECCSEEECCCCCSCCE-------------EESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             hHHHHHHHHHHh----cCCceEEEecceecCCCCcccEE-------------EeeCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence            999999887754    58999999999998654322110             0113446678999999999999999988


Q ss_pred             CCCc-eEEEe
Q 020924          243 EAEG-RYICT  251 (319)
Q Consensus       243 ~~~~-~~~~~  251 (319)
                      +..| .+.++
T Consensus       193 ~~~g~~~~~s  202 (205)
T d1hdoa_         193 EYDGHSTYPS  202 (205)
T ss_dssp             TTTTCEEEEE
T ss_pred             CCCCEEEecC
Confidence            7655 44444

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-31  Score=218.81  Aligned_cols=209  Identities=17%  Similarity=0.107  Sum_probs=159.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |++|+|||||||||||++++++|+++|+  +|++++|++.......       ...++...+|+.+.+++..+++++|++
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-------~~~i~~~~~D~~~~~~~~~~~~~~d~v   84 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG   84 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-------cceeeeeeecccccccccccccccccc
Confidence            6778999999999999999999999884  8999999865432211       246788889999999999999999999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCch
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNW  160 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (319)
                      ||+++....   ..+...+.++|+.++.+++++|.+.++++||++||..++. .                      +.+.
T Consensus        85 i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~-~----------------------~~~~  138 (232)
T d2bkaa1          85 FCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-S----------------------SNFL  138 (232)
T ss_dssp             EECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-T----------------------CSSH
T ss_pred             ccccccccc---ccchhhhhhhcccccceeeecccccCccccccCCcccccc-C----------------------ccch
Confidence            999986432   1223677899999999999999999999999999965432 1                      1356


Q ss_pred             HHhhHHHHHHHHHHhhhhCCc-eEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhh
Q 020924          161 YCLSKTEAESEALEFGKKTGL-DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       161 Y~~sK~~~e~~~~~~~~~~~~-~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      |+.+|..+|..+.+.    ++ +++|+||+.+||+.....  ....++.......+  .+......||++|+|++++.++
T Consensus       139 Y~~~K~~~E~~l~~~----~~~~~~IlRP~~i~G~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~I~~~dvA~a~i~~~  210 (232)
T d2bkaa1         139 YLQVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLP--DSWASGHSVPVVTVVRAMLNNV  210 (232)
T ss_dssp             HHHHHHHHHHHHHTT----CCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCC--TTGGGGTEEEHHHHHHHHHHHH
T ss_pred             hHHHHHHhhhccccc----cccceEEecCceeecCCCcCc--HHHHHHHHHhhccC--CcccCCCeEEHHHHHHHHHHHH
Confidence            999999999988764    55 489999999999865432  22222233322211  1223345799999999999999


Q ss_pred             ccCCCCceEEEec
Q 020924          240 EKAEAEGRYICTA  252 (319)
Q Consensus       240 ~~~~~~~~~~~~~  252 (319)
                      ..+...+.+++++
T Consensus       211 ~~~~~~~~~i~~~  223 (232)
T d2bkaa1         211 VRPRDKQMELLEN  223 (232)
T ss_dssp             TSCCCSSEEEEEH
T ss_pred             hcCccCCeEEEcH
Confidence            8887777787765

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=6.1e-27  Score=194.32  Aligned_cols=225  Identities=15%  Similarity=0.121  Sum_probs=168.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|+++||||++.||++++++|+++|++|++.+|+.++ .....+++...+.++.++.+|++|+++++++++     
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA-ANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            55789999999999999999999999999999999997653 233344555556688999999999999887764     


Q ss_pred             --CcceEEEecccCCCCCC---CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 --GCNGVFHIACPAPSTTV---PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                        .+|++|||||.......   .+.++..+++|+.++..+++++.+.    +-.+||++||.++..+.++          
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~----------  155 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------  155 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc----------
Confidence              57999999997654322   2336778999999999999887643    5568999999877655432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.||.+.+.+.+.++.+   +|+++..|.||.+.++.....  ..........+..      +..
T Consensus       156 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~e~~~~~~~~~------pl~  216 (255)
T d1fmca_         156 -----------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHT------PIR  216 (255)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTC------SSC
T ss_pred             -----------cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc--CCHHHHHHHHhcC------CCC
Confidence                       566999999999988888765   589999999999987643222  1233333333332      345


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEecccC
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTAHMI  255 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~~  255 (319)
                      .+..++|+|+++++++....  ..| ...++|..+
T Consensus       217 R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            67899999999999997543  245 456666443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=2.6e-28  Score=209.29  Aligned_cols=232  Identities=15%  Similarity=0.082  Sum_probs=164.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-ccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-KASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +++||||||||||||++++++|+++||+|++++|+............. ....+++++.+|++|.+.+.+++.+++.++|
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            457899999999999999999999999999999986643222221111 1235799999999999999999999999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +++....           ..|..++.+++++|++.+..++|+.||.+.....          +..+.      .+...|.
T Consensus        82 ~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~----------~~~~~------~~~~~~~  134 (312)
T d1qyda_          82 ALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI----------MEHAL------QPGSITF  134 (312)
T ss_dssp             CCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS----------CCCCC------SSTTHHH
T ss_pred             hhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC----------ccccc------chhhhhh
Confidence            9865322           2345557788999999987788888884332211          11111      1244466


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHHHhh
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      .+|..++.    +.+..+++++++||+.+||+...........   ....+....   .|++.++|+|++|+|++++.++
T Consensus       135 ~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         135 IDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLDGH---MMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             HHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTTCC---SSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHH----hhcccccceEEeccceeecCCccchhhHHHH---hhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence            66665555    4445689999999999999754322111100   011122222   4568899999999999999999


Q ss_pred             ccCCCCc--eEEEec-ccCCHHHHHHHHHHhCC
Q 020924          240 EKAEAEG--RYICTA-HMIRARDLVDKLKSLYP  269 (319)
Q Consensus       240 ~~~~~~~--~~~~~~-~~~s~~e~~~~~~~~~g  269 (319)
                      .++...+  .|++++ ..+|++|+++.+.+.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  240 (312)
T d1qyda_         208 DDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  240 (312)
T ss_dssp             TCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             cCccccCceEEEeCCCcCCCHHHHHHHHHHHHC
Confidence            8876544  455654 78999999999999987

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=2.3e-27  Score=196.30  Aligned_cols=229  Identities=20%  Similarity=0.155  Sum_probs=160.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCe--EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYF--VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .|++|||||||||||++++++|+++|++  |+++.|++++  .   ..+   ..+++++.+|+++.+.+.++++++|+||
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~--~---~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi   73 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--K---EKI---GGEADVFIGDITDADSINPAFQGIDALV   73 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH--H---HHT---TCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH--H---Hhc---cCCcEEEEeeeccccccccccccceeeE
Confidence            4679999999999999999999999976  5556665432  1   111   3578999999999999999999999999


Q ss_pred             EecccCCCCCC-------------CCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           82 HIACPAPSTTV-------------PNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        82 ~~a~~~~~~~~-------------~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |+|+.......             .........+|+.++.++++.+.....+++.+.|+........             
T Consensus        74 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-------------  140 (252)
T d2q46a1          74 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH-------------  140 (252)
T ss_dssp             ECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC-------------
T ss_pred             EEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc-------------
Confidence            99986432110             1112556788999999999999998888999988854332211             


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccH
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDV  228 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  228 (319)
                        + ........|...+...+    .+..+.+++++++||+++||+.......         ..+..........+|||+
T Consensus       141 --~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~i~~  204 (252)
T d2q46a1         141 --P-LNKLGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEGGVREL---------LVGKDDELLQTDTKTVPR  204 (252)
T ss_dssp             --G-GGGGGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCTTSSCE---------EEESTTGGGGSSCCEEEH
T ss_pred             --c-cccccccchhhhhhhhh----hhhhcccccceeecceEEECCCcchhhh---------hhccCcccccCCCCeEEH
Confidence              0 00011233454444433    4445579999999999999997543211         111111123355789999


Q ss_pred             HHHHHHHHHhhccCCCCc-eEEEec----ccCCHHHHHHHHHHhCC
Q 020924          229 RDVAEALLLAYEKAEAEG-RYICTA----HMIRARDLVDKLKSLYP  269 (319)
Q Consensus       229 ~D~a~~~~~~~~~~~~~~-~~~~~~----~~~s~~e~~~~~~~~~g  269 (319)
                      +|+|++++.+++++...+ +|++++    ...+++|+.+++.++.+
T Consensus       205 ~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         205 ADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             HHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             HHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            999999999999887665 787653    34678888888876654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=3.7e-26  Score=189.26  Aligned_cols=221  Identities=14%  Similarity=0.144  Sum_probs=165.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||++.||++++++|+++|++|++.+|+.+.. ....+++...+.++.++.+|++|.+++.++++      
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l-~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC-DSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHH-HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999999976532 23344455555689999999999999988775      


Q ss_pred             -CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++||||+.......    .+.++..+++|+.++..+++++.+    .+..+||++||.++..+.++          
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~----------  155 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG----------  155 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC----------
Confidence             57999999997654321    234678899999999999887753    35579999999887765432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.||.+.+.+.+.++.+   +|+++..|.||.+.++.....   ............      +..
T Consensus       156 -----------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~------pl~  215 (251)
T d2c07a1         156 -----------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNI------PAG  215 (251)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTC------TTS
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcC------CCC
Confidence                       466999999999999888664   489999999999988764322   233333333332      345


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      .+..++|+|+++++++....  ..| ...++|.
T Consensus       216 R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         216 RMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            68899999999999997543  245 3455543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.5e-26  Score=190.38  Aligned_cols=219  Identities=20%  Similarity=0.173  Sum_probs=162.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---Cc
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---GC   77 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   77 (319)
                      ||+++|++|||||++.||++++++|+++|++|++.+|+.++.. ...++    .+++..+.+|++|.++++++++   .+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~g~i   75 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV-SLAKE----CPGIEPVCVDLGDWDATEKALGGIGPV   75 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHH----STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHh----cCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            8999999999999999999999999999999999999765321 12222    3578899999999999999887   47


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |++|||||......    ..+.++..+++|+.++..+.+++.+.     .-.++|++||.....+.++            
T Consensus        76 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------  143 (242)
T d1cyda_          76 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN------------  143 (242)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT------------
T ss_pred             eEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc------------
Confidence            99999999755431    22335778999999999999877532     3459999999876654432            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMI  225 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
                               ...|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++...... .............      +.+.+
T Consensus       144 ---------~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~------pl~R~  207 (242)
T d1cyda_         144 ---------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERH------PLRKF  207 (242)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHS------TTSSC
T ss_pred             ---------cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc-CCHHHHHHHHhcC------CCCCC
Confidence                     466999999999998888765   4899999999999876321110 1122233333322      45568


Q ss_pred             ccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          226 VDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       226 i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ..++|+|+++++++.....  .| .+.++|
T Consensus       208 ~~peeva~~v~fL~S~~s~~itG~~i~vDG  237 (242)
T d1cyda_         208 AEVEDVVNSILFLLSDRSASTSGGGILVDA  237 (242)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             cCHHHHHHHHHHHhCchhcCcCCceEEeCc
Confidence            8999999999999965432  44 455655

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.94  E-value=4.3e-26  Score=189.70  Aligned_cols=224  Identities=15%  Similarity=0.094  Sum_probs=165.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++++|++|||||++.||++++++|+++|++|++.+|+.++. ....+++...+.++.++.+|++|.++++++++     
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKEL-NDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999976542 33445555556678899999999998887653     


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                         .+|++|||||......    ..+.++..+++|+.++..+.+++.+    .+-.+||++||..+..+.+.        
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~--------  154 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY--------  154 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT--------
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc--------
Confidence               3799999999765432    1234577899999999999888754    35569999999877654432        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCc--cHHHHHHHHhcCccccC
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNT--SSLVLIKLLKEGYESLE  219 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~  219 (319)
                                   ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++........  ....+.+.....     
T Consensus       155 -------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-----  216 (259)
T d2ae2a_         155 -------------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-----  216 (259)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS-----
T ss_pred             -------------ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcC-----
Confidence                         466999999999999888765   489999999999977642211111  112222333222     


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       +...+..++|+|+++++++....  ..| ...++|
T Consensus       217 -pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         217 -ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             -TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence             34567899999999999997543  244 445554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.94  E-value=1.2e-25  Score=185.63  Aligned_cols=220  Identities=15%  Similarity=0.113  Sum_probs=157.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||++.||+++++.|+++|++|++.+|+..+.....++   ..+.++.++.+|++|.++++++++       
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR---NLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH---HcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999999987643332332   335688999999999999988764       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......    ..+.|+..+++|+.++..+++++.+    .+-.+||++||..+..+.+.           
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~-----------  148 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA-----------  148 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS-----------
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc-----------
Confidence            5899999999765432    2344688899999999999998864    35579999999877655432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++.......  .... ....    ........
T Consensus       149 ----------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--~~~~-~~~~----~~~~~l~r  211 (247)
T d2ew8a1         149 ----------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--SAMF-DVLP----NMLQAIPR  211 (247)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------------CTTSSSCS
T ss_pred             ----------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc--chhH-HHHH----HHhccCCC
Confidence                      466999999999888887654   48999999999998775432210  0000 0000    01123446


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +..++|+|+++++++....  ..| ...++|.
T Consensus       212 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         212 LQVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            7899999999999997543  244 4555553

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=2.3e-25  Score=183.35  Aligned_cols=215  Identities=18%  Similarity=0.128  Sum_probs=159.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|+++||||++.||++++++|+++|++|++.+|+.++. ....++     .+.+++.+|++|+++++++++     
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l-~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL-REAAEA-----VGAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT-----TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHH-----cCCeEEEEecCCHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999975432 122222     357889999999999988764     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||......    ..+.++..+++|+.++..+.+++.+.    +...++++||. ...+.+          
T Consensus        75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~----------  143 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNL----------  143 (242)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCT----------
T ss_pred             cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCC----------
Confidence              4799999999765431    22346788999999999999988754    44467777774 333322          


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++.....   ............      +.
T Consensus       144 -----------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~------pl  203 (242)
T d1ulsa_         144 -----------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAAT------PL  203 (242)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTC------TT
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC---CHHHHHHHHhcC------CC
Confidence                       1466999999999888887655   489999999999988764432   233333433333      34


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..+..++|+|.++++++....  ..| ...++|
T Consensus       204 ~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  236 (242)
T d1ulsa_         204 GRAGKPLEVAYAALFLLSDESSFITGQVLFVDG  236 (242)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhchhhCCCCCcEEEECC
Confidence            567899999999999996543  245 345554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.94  E-value=6.7e-26  Score=188.52  Aligned_cols=223  Identities=16%  Similarity=0.120  Sum_probs=163.8

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |+++|+++||||++.||++++++|+++|++|++.+|+.++......+++...+.++..+.+|++|+++++++++      
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            48899999999999999999999999999999999986543344445555555678899999999999888764      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCC-CEEEEeccccccccCCCCCCCcccCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKV-KRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~-~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                       .+|++|||||......    ..+.++..+++|+.++..+.+++.+    .+. .+||++||.+...+.+.         
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~---------  154 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL---------  154 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc---------
Confidence             5799999999765432    2234678899999999999888754    333 46999999876654432         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++...... .............      +.
T Consensus       155 ------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~------pl  215 (261)
T d1geea_         155 ------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMI------PM  215 (261)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTC------TT
T ss_pred             ------------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc-CCHHHHHHHHhcC------CC
Confidence                        466999999999888887655   4899999999999876432100 0011111111111      44


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..+..++|+|+++++++....  ..| .+.++|
T Consensus       216 ~R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            567899999999999996543  245 455654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.8e-26  Score=187.25  Aligned_cols=219  Identities=18%  Similarity=0.200  Sum_probs=162.3

Q ss_pred             CC--CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---
Q 020924            1 MA--LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         1 m~--~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      |+  +++|++|||||++.||++++++|+++|++|++.+|+.++. ....++    .+++..+.+|++|.++++++++   
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l-~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~g   75 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-DSLVRE----CPGIEPVCVDLGDWEATERALGSVG   75 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH----STTCEEEECCTTCHHHHHHHHTTCC
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-HHHHHh----cCCCeEEEEeCCCHHHHHHHHHHhC
Confidence            55  5899999999999999999999999999999999975532 112222    2568899999999999999886   


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|++|||||......    ..+.++..+++|+.++..+.+++.+.     +..+||++||.++..+.+.          
T Consensus        76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~----------  145 (244)
T d1pr9a_          76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN----------  145 (244)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT----------
T ss_pred             CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc----------
Confidence            4799999999765432    22345778999999999998887542     4569999999877654432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++........ ...........      +..
T Consensus       146 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~~------pl~  207 (244)
T d1pr9a_         146 -----------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRI------PLG  207 (244)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS-HHHHHHHHTTC------TTC
T ss_pred             -----------hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC-hHHHHHHHhcC------CCC
Confidence                       466999999999988887754   489999999999987643322111 22223333222      345


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+..++|+|+++++++....  ..| ...++|
T Consensus       208 R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  239 (244)
T d1pr9a_         208 KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhCCcCCcEEEECc
Confidence            68899999999999997543  244 445554

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=7.1e-26  Score=185.68  Aligned_cols=209  Identities=14%  Similarity=0.109  Sum_probs=154.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ++++|++|||||++.||++++++|+++|++|++.+|+....            ..+..+.+|++|.++++++++      
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999987642            456789999999999888764      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACL----EAKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||......    ..+.|+..+++|+.++..+++++.    +.+.++||++||.++..+.++          
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~----------  141 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN----------  141 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C----------
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcc----------
Confidence             4799999999754432    223467889999999988887665    446669999999877655432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ...|+.||.+.+.+.+.++.+   +|+++..|.||.+.++.....   ............      +..
T Consensus       142 -----------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~------pl~  201 (237)
T d1uzma1         142 -----------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFI------PAK  201 (237)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGC------TTC
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---CHHHHHHHHhcC------CCC
Confidence                       466999999999988887665   489999999999987642211   112222222211      445


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+..++|+|.++++++....  ..| ...++|
T Consensus       202 R~~~pedvA~~v~fL~S~~s~~itG~~i~vdG  233 (237)
T d1uzma1         202 RVGTPAEVAGVVSFLASEDASYISGAVIPVDG  233 (237)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            67899999999999996543  245 345544

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=9.5e-26  Score=186.63  Aligned_cols=223  Identities=18%  Similarity=0.153  Sum_probs=162.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh-hccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL-EKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      .++++|++|||||++.||++++++|+++|++|++.+|+.++... ..+++ ...+.++.++.+|++|+++++++++    
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE-AAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999998664322 22222 2224578899999999999888764    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccc-cCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVG-LNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~-~~~~~~~~~~~  143 (319)
                         .+|++|||||......    ..+.++..+++|+.++..+++++.+.    +-.++|++||..+.. +.+        
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~--------  151 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP--------  151 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS--------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCc--------
Confidence               5899999999754432    23345778999999999999988654    446999999965432 221        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   ....|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++...... ..........+..      
T Consensus       152 -------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~------  211 (251)
T d1vl8a_         152 -------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKRI------  211 (251)
T ss_dssp             -------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHTC------
T ss_pred             -------------cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc-CCHHHHHHHHhcC------
Confidence                         1456999999999988887654   4899999999999877532110 0122223333322      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +...+..++|+|+++++++....  ..| .+.++|
T Consensus       212 pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDG  246 (251)
T d1vl8a_         212 PLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  246 (251)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCc
Confidence            34567789999999999997543  244 445554

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=6.6e-26  Score=186.67  Aligned_cols=217  Identities=18%  Similarity=0.167  Sum_probs=162.3

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |+++|+++||||++.||++++++|+++|++|++.+|+.+... ...+++   +.+...+.+|++|.++++++++      
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQ-AISDYL---GANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            578999999999999999999999999999999999765321 222222   3467889999999999888765      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||......    ..+.++..+++|+.++..+++++.+.    +-.+||++||.++..+.++          
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~----------  146 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG----------  146 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC----------
Confidence             5799999998765432    22346778999999999999988643    5569999999887765432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                                 ..+|+.||.+.+.+.+.++.+   +|++++.|.||.+-++.....   ............      +..
T Consensus       147 -----------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~------pl~  206 (243)
T d1q7ba_         147 -----------QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL---SDDQRAGILAQV------PAG  206 (243)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTC------TTS
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh---hhhHHHHHHhcC------CCC
Confidence                       466999999999988887755   589999999999977643221   122222222222      345


Q ss_pred             ccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          224 MIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+..++|+|.++++++....  ..| ...++|
T Consensus       207 R~~~pedvA~~v~fL~S~~s~~itGq~i~vdG  238 (243)
T d1q7ba_         207 RLGGAQEIANAVAFLASDEAAYITGETLHVNG  238 (243)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            67899999999999997543  244 445554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.94  E-value=2.2e-25  Score=185.15  Aligned_cols=223  Identities=14%  Similarity=0.126  Sum_probs=163.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |+++|++|||||++.||++++++|+++|++|++++|++.+ .....+++...+..+.++.+|+++.++++++++      
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~-l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE-LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999998653 233445555556778899999999998887653      


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||......    ..+.+...+++|+.++..+.+++...    +..++|++||.++..+.+.         
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~---------  152 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS---------  152 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT---------
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc---------
Confidence              2699999999765432    22346788999999999999887643    5669999999887655432         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccccC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~  219 (319)
                                  ...|+.+|.+.+.+.+.++++   +|+++..|.||.+.++......   ......+.......     
T Consensus       153 ------------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-----  215 (258)
T d1ae1a_         153 ------------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT-----  215 (258)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS-----
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcC-----
Confidence                        466999999999999988765   4899999999999887543221   11223333333332     


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCce-EEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEGR-YICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~  252 (319)
                       +.+.+..++|+|.++++++....  ..|. +.++|
T Consensus       216 -plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         216 -PMGRAGKPQEVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             -TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence             44568899999999999996433  3554 45544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=4.1e-27  Score=200.85  Aligned_cols=225  Identities=15%  Similarity=0.131  Sum_probs=160.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH----HHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN----ARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      .+|||||||||||||++++++|+++||+|++++|+......    ..+..+.  ..+++++.+|+.+...+...+++++.
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDV   79 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhhhcee
Confidence            35789999999999999999999999999999998664321    1122221  35789999999999999999999999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNN  159 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (319)
                      ++|+++...               ..++.++++++...+++++++.||..... ..          ....      .+..
T Consensus        80 vi~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-~~----------~~~~------~~~~  127 (307)
T d1qyca_          80 VISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFPSEFGNDV-DN----------VHAV------EPAK  127 (307)
T ss_dssp             EEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEECSCCSSCT-TS----------CCCC------TTHH
T ss_pred             eeecccccc---------------cchhhHHHHHHHHhccccceeeecccccc-cc----------cccc------cccc
Confidence            999886432               22345678888888888999988843221 11          1111      1123


Q ss_pred             hHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc---cCCcccccccHHHHHHHHH
Q 020924          160 WYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES---LENKLRMIVDVRDVAEALL  236 (319)
Q Consensus       160 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~  236 (319)
                      .+...+...+..+.    +.+++++++||+.+||+.......    ++....++....   .+++.++|+|++|+|++++
T Consensus       128 ~~~~~~~~~~~~~~----~~~~~~~i~r~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  199 (307)
T d1qyca_         128 SVFEVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQ----AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI  199 (307)
T ss_dssp             HHHHHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTC----TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             ccccccccccchhh----ccCCCceecccceecCCCccchhh----hhhhhhhcccceeeecccccccCCcHHHHHHHHH
Confidence            35555555555444    358999999999999976433211    111122222222   4568899999999999999


Q ss_pred             HhhccCCCCc--eEEEe-cccCCHHHHHHHHHHhCCC
Q 020924          237 LAYEKAEAEG--RYICT-AHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       237 ~~~~~~~~~~--~~~~~-~~~~s~~e~~~~~~~~~g~  270 (319)
                      .+++.+...+  .|+++ ++.+|+.|+++.+.++.|.
T Consensus       200 ~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         200 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             TTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             HHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCC
Confidence            9998876544  46655 5899999999999999984

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=5.9e-27  Score=189.94  Aligned_cols=192  Identities=19%  Similarity=0.171  Sum_probs=134.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-CcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-GCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi   81 (319)
                      .|+|||||||||||++++++|+++|+  +|+++.|++...           .+.+   ..+..|..++...+. .+|+||
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----------~~~~---~~~~~d~~~~~~~~~~~~d~vi   67 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------HPRL---DNPVGPLAELLPQLDGSIDTAF   67 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------CTTE---ECCBSCHHHHGGGCCSCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----------cccc---cccccchhhhhhccccchheee
Confidence            47999999999999999999999997  677777765421           1233   334445444444443 589999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchH
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWY  161 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  161 (319)
                      ||+|...... .. ...+.+.|+.++.+++++|++.+++++|++||..++. .+                      .+.|
T Consensus        68 ~~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~-~~----------------------~~~y  122 (212)
T d2a35a1          68 CCLGTTIKEA-GS-EEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-KS----------------------SIFY  122 (212)
T ss_dssp             ECCCCCHHHH-SS-HHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-TC----------------------SSHH
T ss_pred             eeeeeecccc-cc-ccccccchhhhhhhccccccccccccccccccccccc-cc----------------------ccch
Confidence            9987653221 12 2578899999999999999999999999999965432 11                      4559


Q ss_pred             HhhHHHHHHHHHHhhhhCCc-eEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCCcccccccHHHHHHHHHHhh
Q 020924          162 CLSKTEAESEALEFGKKTGL-DVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LENKLRMIVDVRDVAEALLLAY  239 (319)
Q Consensus       162 ~~sK~~~e~~~~~~~~~~~~-~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~  239 (319)
                      +.+|..+|+.+++.    ++ +++|+||+.+||+......   ...     ...+.. ......+.||++|+|++++.++
T Consensus       123 ~~~K~~~E~~l~~~----~~~~~~I~Rp~~v~G~~~~~~~---~~~-----~~~~~~~~~~~~~~~i~v~DvA~ai~~~~  190 (212)
T d2a35a1         123 NRVKGELEQALQEQ----GWPQLTIARPSLLFGPREEFRL---AEI-----LAAPIARILPGKYHGIEACDLARALWRLA  190 (212)
T ss_dssp             HHHHHHHHHHHTTS----CCSEEEEEECCSEESTTSCEEG---GGG-----TTCCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHhhhcccc----ccccceeeCCcceeCCcccccH---HHH-----HHHHHhhccCCCCcEEEHHHHHHHHHHHH
Confidence            99999999887653    44 5999999999998754211   000     011111 1112235699999999999999


Q ss_pred             ccCCCCceE
Q 020924          240 EKAEAEGRY  248 (319)
Q Consensus       240 ~~~~~~~~~  248 (319)
                      +++.. |.+
T Consensus       191 ~~~~~-g~~  198 (212)
T d2a35a1         191 LEEGK-GVR  198 (212)
T ss_dssp             TCCCS-EEE
T ss_pred             cCCCC-CCE
Confidence            87654 443

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.94  E-value=1.2e-25  Score=187.40  Aligned_cols=229  Identities=14%  Similarity=0.090  Sum_probs=158.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-ccCCCeEEEEccCCChhhHHHHhc------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-KASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |++|++|||||++.||++++++|+++|++|++.+|+..........++. ..+.++.++.+|++|.++++++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999976433222222222 124578899999999999998775      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||......    ..+.+...+++|+.++..+++++.+.    +-.+||++||.++..+.+.          
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~----------  151 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN----------  151 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC----------
Confidence             4799999999765432    23346788999999999988887543    5569999999887765432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHH--HHHHHH-hcCccccCC
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSL--VLIKLL-KEGYESLEN  220 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~--~~~~~~-~~~~~~~~~  220 (319)
                                 ...|+.||.+.+.+.+.++.+   +|++++.|.||.+-++...........  ...... .........
T Consensus       152 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T d1x1ta1         152 -----------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ  220 (260)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC
T ss_pred             -----------cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcC
Confidence                       466999999999988888765   589999999999987754322110000  000000 000000011


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +.+.+..++|+|+++++++....  ..| ...++|
T Consensus       221 Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDG  255 (260)
T d1x1ta1         221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECc
Confidence            45668899999999999997543  244 345554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.94  E-value=1.8e-25  Score=185.75  Aligned_cols=221  Identities=15%  Similarity=0.122  Sum_probs=161.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|+++||||++.||++++++|+++|++|++.+|+.+.. ....+++   +.++.++.+|++|+++++++++     
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAA-RATAAEI---GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHH-HHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999976532 2222333   4678999999999999998765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||......    ..+.++..+++|+.++..+++++.+.     ...+||++||.++..+.+.        
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------  148 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL--------  148 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------
T ss_pred             hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc--------
Confidence              4799999999765432    22346788999999999999876432     3469999999887655432        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--------ccHHHHHHHHhc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--------TSSLVLIKLLKE  213 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--------~~~~~~~~~~~~  213 (319)
                                   ...|+.||.+.+.+.+.++.+   +|++++.|.||.+-++.......        ............
T Consensus       149 -------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (256)
T d1k2wa_         149 -------------VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA  215 (256)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred             -------------ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc
Confidence                         466999999999888887654   48999999999998775211000        000011111111


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                            .+.+.+..++|+|.++++++....  ..| ...++|
T Consensus       216 ------~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDG  251 (256)
T d1k2wa_         216 ------VPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDG  251 (256)
T ss_dssp             ------STTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             ------CCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECc
Confidence                  145668899999999999986543  245 455655

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.94  E-value=2.7e-25  Score=184.23  Aligned_cols=217  Identities=16%  Similarity=0.105  Sum_probs=159.8

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh--ccCCCeEEEEccCC-ChhhHHHHhc--
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE--KASENLKLFKADLL-DYDSVKSAIV--   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~-~~~~~~~~~~--   75 (319)
                      |++++|+||||||++.||.+++++|+++|++|+++.|+.++..  .+.++.  ....++.++.+|++ +.++++++++  
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT--ALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH--HHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHH--HHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence            8999999999999999999999999999999999998876432  222221  22347889999998 5556666543  


Q ss_pred             -----CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-------CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 -----GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-------KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-------~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                           .+|++|||||...    .+.++..+++|+.++.++..++.+.       +..+||++||.+++.+.++       
T Consensus        79 ~~~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~-------  147 (254)
T d1sbya1          79 FDQLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------  147 (254)
T ss_dssp             HHHHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------
T ss_pred             HHHcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC-------
Confidence                 5899999999654    3567899999999999999988753       2357999999888765532       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--ccHHHHHHHHhcCcccc
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--TSSLVLIKLLKEGYESL  218 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~  218 (319)
                                    ...|+.||.+...+.+.++.+   +|++++.|.||.+.++.......  .....+.+..       
T Consensus       148 --------------~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~-------  206 (254)
T d1sbya1         148 --------------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-------  206 (254)
T ss_dssp             --------------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-------
T ss_pred             --------------CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc-------
Confidence                          566999999999888887765   48999999999998763211100  0000111111       


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCCCceEEEecc
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEAEGRYICTAH  253 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  253 (319)
                        ..+....++++|++++.+++....+.++.+.|.
T Consensus       207 --~~~~~~~~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         207 --LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             --TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             --ccCCCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence              223456899999999999987664446777764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=2.9e-25  Score=182.55  Aligned_cols=211  Identities=16%  Similarity=0.154  Sum_probs=159.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||++.||++++++|+++|++|++.+|++++. ....+++   ..+..++.+|++|+++++++++       
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG-KAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999999986532 2222333   3468889999999999888764       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||.......    .+.|+..+++|+.++..+++.+.+    .+-.+||++||..+..+.++           
T Consensus        80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-----------  148 (244)
T d1nffa_          80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA-----------  148 (244)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----------
T ss_pred             CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc-----------
Confidence            47999999997654322    234678899999999999987753    35569999999887655432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                                ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++........              ........
T Consensus       149 ----------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------------~~~~pl~R  204 (244)
T d1nffa_         149 ----------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED--------------IFQTALGR  204 (244)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT--------------CSCCSSSS
T ss_pred             ----------ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH--------------HHhccccC
Confidence                      466999999999988887765   489999999999987754321100              01114556


Q ss_pred             cccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          225 IVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +..++|+|+++++++....  ..| .+.++|
T Consensus       205 ~~~p~diA~~v~fL~s~~s~~itG~~i~vDG  235 (244)
T d1nffa_         205 AAEPVEVSNLVVYLASDESSYSTGAEFVVDG  235 (244)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCCEEEECC
Confidence            8899999999999996433  245 456654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.94  E-value=3.6e-25  Score=184.28  Aligned_cols=212  Identities=14%  Similarity=0.108  Sum_probs=158.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||++.||+++++.|+++|++|++.+|+.+.. ....+++...+.++..+.+|++|.++++++++       
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREAL-EKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999976532 23334444445688999999999998888764       


Q ss_pred             CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|++|||||.....     ...+.|...+++|+.++..+.+++.+.    +..+||++||.++..+.++          
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~----------  151 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN----------  151 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT----------
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc----------
Confidence            479999999965332     122346778999999999999988643    5569999999887765432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCC-------------CCCCccHHHHHHH
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQ-------------SKVNTSSLVLIKL  210 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~-------------~~~~~~~~~~~~~  210 (319)
                                 ..+|+.||.+.+.+.+.++.+   +|++++.|.||.+.++...             .............
T Consensus       152 -----------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T d1zema1         152 -----------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQM  220 (260)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHH
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHH
Confidence                       466999999999888887655   4899999999999876311             0001111122222


Q ss_pred             HhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          211 LKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       211 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ....      +...+..++|+|.++++++...
T Consensus       221 ~~~~------Pl~R~g~pedvA~~v~fL~S~~  246 (260)
T d1zema1         221 IGSV------PMRRYGDINEIPGVVAFLLGDD  246 (260)
T ss_dssp             HHTS------TTSSCBCGGGSHHHHHHHHSGG
T ss_pred             HhcC------CCCCCcCHHHHHHHHHHHhCch
Confidence            2222      3456789999999999999754

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.93  E-value=1.2e-24  Score=182.14  Aligned_cols=224  Identities=15%  Similarity=0.174  Sum_probs=163.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||++.||++++++|+++|++|++++|+.+.. ....+++. ...++.++.+|++|+++++++++       
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-~~~~~~l~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG-QKVCNNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHhc-CCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6889999999999999999999999999999999976532 22333332 24568889999999999988774       


Q ss_pred             CcceEEEecccCCCC--C----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 GCNGVFHIACPAPST--T----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~--~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                      .+|++|||||.....  .    ..+.++..+++|+.++..+++++.+.    +..++|++||..+..+.+.         
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~---------  152 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG---------  152 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT---------
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc---------
Confidence            579999999965332  1    12335778899999999999988643    4569999999876654321         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                 ....|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++......................    ..
T Consensus       153 -----------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----~~  217 (268)
T d2bgka1         153 -----------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN----LK  217 (268)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS----SC
T ss_pred             -----------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc----cC
Confidence                       1345999999999888887654   48999999999999887554433333333332222211    23


Q ss_pred             cccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ..+..++|+|+++++++....  ..| .+.++|
T Consensus       218 gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         218 GTLLRAEDVADAVAYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             SCCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCccCceEEECc
Confidence            457899999999999996543  245 456655

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.93  E-value=3e-25  Score=182.79  Aligned_cols=207  Identities=15%  Similarity=0.104  Sum_probs=156.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   78 (319)
                      +.||||||++.||++++++|+++|++|++.+++..+......+++...+.++.++.+|++|.++++++++       .+|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999999887655443333334444445678899999999999988764       479


Q ss_pred             eEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           79 GVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        79 ~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      ++|||||......    ..+.++..+++|+.++..+++++.+    .+-.+||++||.++..+.++              
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~--------------  147 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG--------------  147 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC--------------
Confidence            9999999765432    2334678899999999999888864    35579999999887765532              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccccccc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVD  227 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (319)
                             ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++....   .............      +...+..
T Consensus       148 -------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~------pl~R~~~  211 (244)
T d1edoa_         148 -------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK---LGEDMEKKILGTI------PLGRTGQ  211 (244)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCHHHHHHHHTSC------TTCSCBC
T ss_pred             -------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH---hhHHHHHHHHhcC------CCCCCcC
Confidence                   466999999999999888765   48999999999997764322   1222323332222      3456789


Q ss_pred             HHHHHHHHHHhhccC
Q 020924          228 VRDVAEALLLAYEKA  242 (319)
Q Consensus       228 v~D~a~~~~~~~~~~  242 (319)
                      ++|+|+++++++.++
T Consensus       212 p~dvA~~v~fLa~S~  226 (244)
T d1edoa_         212 PENVAGLVEFLALSP  226 (244)
T ss_dssp             HHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHCCc
Confidence            999999999997444

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.93  E-value=3.8e-25  Score=183.99  Aligned_cols=221  Identities=18%  Similarity=0.165  Sum_probs=163.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|++|||||++.||++++++|+++|++|++.+|+.+.. ....+++...+.++.++.+|++|+++++++++       .+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l-~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL-RTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999976532 23344555556689999999999999988764       47


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC------CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA------KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~------~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      |++|||||......    ..+.++..+++|+.++.++++++.+.      +..+||++||..+..+.++           
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~-----------  149 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-----------  149 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT-----------
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc-----------
Confidence            99999999765432    23346788999999999999998653      4458999999877665432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC--------CCccHHHHHHHHhcCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK--------VNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~  216 (319)
                                ...|+.||.+.+.+.+.++.+   +|++++.|.||.+-++.....        .........+.....  
T Consensus       150 ----------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--  217 (257)
T d2rhca1         150 ----------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV--  217 (257)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS--
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC--
Confidence                      466999999999999988766   479999999999976532100        001111222222211  


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                          +...+..++|+|+++++++....  ..| .+.++|.
T Consensus       218 ----PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         218 ----PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             ----TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence                44568899999999999996433  244 4455553

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.93  E-value=3.8e-25  Score=183.09  Aligned_cols=219  Identities=15%  Similarity=0.129  Sum_probs=159.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.+.. ....+++ ..+.++.++.+|++|+++++++++       
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVG-EKAAKSV-GTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh-CCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999999976532 2222333 335689999999999999888765       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CC-CEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KV-KRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                      .+|++|||||.......    .+.|...+++|+.++..+++++.+.    +. .+||++||..+..+.+.          
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~----------  151 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS----------  151 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT----------
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC----------
Confidence            47999999997654322    2335678999999999999988643    33 38999999877654432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhh-----hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGK-----KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-----~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                 ...|+.+|.+.+.+.+.++.     .+|++++.|.||.+.++.......  ........      ...+
T Consensus       152 -----------~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~------~~~p  212 (251)
T d1zk4a1         152 -----------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMSQR------TKTP  212 (251)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHTST------TTCT
T ss_pred             -----------chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC--HHHHHHHH------hCCC
Confidence                       46699999999988887654     358999999999998764322110  11111110      1114


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ...+..++|+|.++++++....  ..| .+.++|
T Consensus       213 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  246 (251)
T d1zk4a1         213 MGHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECc
Confidence            4568899999999999997543  245 445554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.93  E-value=5.1e-25  Score=182.98  Aligned_cols=222  Identities=11%  Similarity=0.093  Sum_probs=160.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh--ccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE--KASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+++||||++.||++++++|+++|++|++.+|+.+.... ...++.  ..+.++..+.+|++|+++++++++     
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~-~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEA-SKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998654321 112221  123478889999999999988764     


Q ss_pred             --CcceEEEecccCCCC-----CCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPST-----TVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||.....     ...+.|+..+++|+.++..+++++.+    .+-.+||++||.++..+.+.        
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~--------  152 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN--------  152 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS--------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC--------
Confidence              579999999965332     12344678899999999999998754    35569999999887665432        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC-----CCccHHHHHHHHhcCcc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK-----VNTSSLVLIKLLKEGYE  216 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~  216 (319)
                                   ...|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++.....     ..............   
T Consensus       153 -------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (258)
T d1iy8a_         153 -------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV---  216 (258)
T ss_dssp             -------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT---
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhc---
Confidence                         566999999999888887654   489999999999977632100     00111111222211   


Q ss_pred             ccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          217 SLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       217 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                         .+.+.+..++|+|.++++++....  ..| ...++|
T Consensus       217 ---~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         217 ---NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             ---CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ---CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence               145568899999999999997533  244 345554

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=1.6e-25  Score=186.17  Aligned_cols=211  Identities=13%  Similarity=0.102  Sum_probs=142.4

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |+++|++|||||++.||++++++|+++|++|++.+|+.++. ....+++...+.++..+.+|+++.++++++++      
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL-NECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            68899999999999999999999999999999999986542 23334444445689999999999988887653      


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||......    ..+.++..+++|+.++..+++++.+    .+..+||++||..+..+.+.         
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---------  154 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV---------  154 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc---------
Confidence              3799999999765432    2234677899999999999988764    35579999999877654431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                  ...|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++......  ...........      .+.
T Consensus       155 ------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~------~pl  214 (259)
T d1xq1a_         155 ------------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISR------KPL  214 (259)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             ------------cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc--hHHHHHHHHhC------CCC
Confidence                        456999999999888887665   4899999999999877543211  01111111111      134


Q ss_pred             cccccHHHHHHHHHHhhccC
Q 020924          223 RMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ..+..++|+|.++++++...
T Consensus       215 ~R~~~pedvA~~v~fL~S~~  234 (259)
T d1xq1a_         215 GRFGEPEEVSSLVAFLCMPA  234 (259)
T ss_dssp             ---CCGGGGHHHHHHHTSGG
T ss_pred             CCCcCHHHHHHHHHHHhCch
Confidence            55788999999999999643

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=8.7e-25  Score=180.37  Aligned_cols=216  Identities=14%  Similarity=0.096  Sum_probs=157.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.+.  .+..++.     +..++++|++|.++++++++       
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~--~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999998763  2233332     45778999999998887764       


Q ss_pred             CcceEEEecccCCCCCC----CCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTTV----PNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||.......    .+.++..+++|+.++.++++++.+.    +-.+||++||..+..+.+.           
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~-----------  144 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE-----------  144 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT-----------
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc-----------
Confidence            57999999997654321    2335778999999999999988643    4569999999887665432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC---CccHHHHHHHHhcCccccCCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV---NTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                ..+|+.+|.+.+.+.+.++.+   +|++++.|.||.+-++......   .............      .+
T Consensus       145 ----------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~------~p  208 (248)
T d2d1ya1         145 ----------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDL------HA  208 (248)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTT------ST
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhc------CC
Confidence                      566999999999888887665   4899999999999765311000   0000000111111      14


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+.+..++|+|+++++++....  ..| .+.++|
T Consensus       209 l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         209 LRRLGKPEEVAEAVLFLASEKASFITGAILPVDG  242 (248)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence            5568899999999999997543  245 456654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.93  E-value=1.1e-24  Score=180.24  Aligned_cols=215  Identities=13%  Similarity=0.105  Sum_probs=158.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      |+++|++|||||++.||++++++|+++|++|++.+|+.++. ....+++   +.++.++.+|++|.++++++++      
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG-AATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999986532 2222332   3578999999999999988764      


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++|||||......    ..+.++..+++|+.++..+++++.+    .+..+||++||.++..+.++          
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~----------  147 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL----------  147 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc----------
Confidence             5799999999765432    1234577899999999999998864    35579999999887665432          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc-cCC-c
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES-LEN-K  221 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~  221 (319)
                                 ...|+.||.+.+.+.+.++.+   +|+++..|.||.+.++..           .......... ... +
T Consensus       148 -----------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~-----------~~~~~~~~~~~~~~~p  205 (254)
T d1hdca_         148 -----------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-----------AETGIRQGEGNYPNTP  205 (254)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----------HHHTCCCSTTSCTTST
T ss_pred             -----------hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccc-----------hhcCHHHHHHHHhCCC
Confidence                       466999999999888888754   489999999999976521           1111111000 111 2


Q ss_pred             cccc-ccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          222 LRMI-VDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~-i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ...+ ..++|+|.++++++....  ..| .+.++|
T Consensus       206 l~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         206 MGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             TSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCC
Confidence            3334 368999999999996543  245 456665

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1e-24  Score=180.07  Aligned_cols=218  Identities=20%  Similarity=0.194  Sum_probs=158.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||++.||+++++.|+++|++|++.+|+.+..  ..+   ....+++.++.+|++|.++++++++       
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~--~~~---~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG--RAL---EQELPGAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHH---HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHH---HHhcCCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999875532  222   1223578899999999999988764       


Q ss_pred             CcceEEEecccCCCCC-----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 GCNGVFHIACPAPSTT-----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                      .+|++|||||......     ..+.|+..+++|+.++.++++++.+.   +-.+||++||.++..+.+.           
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~-----------  147 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ-----------  147 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT-----------
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccC-----------
Confidence            4799999999654321     12336788999999999999988654   2369999999887665432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccccCCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                ..+|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++.....   .......+.+.....      +
T Consensus       148 ----------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~------p  211 (250)
T d1ydea1         148 ----------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ------P  211 (250)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS------T
T ss_pred             ----------cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC------C
Confidence                      466999999999988887765   489999999999976532110   011112223332222      4


Q ss_pred             ccccccHHHHHHHHHHhhccCC-CCc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE-AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~~  252 (319)
                      .+.+..++|+|.++++++.... ..| .+.++|
T Consensus       212 l~R~g~p~eva~~v~fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         212 LGRMGQPAEVGAAAVFLASEANFCTGIELLVTG  244 (250)
T ss_dssp             TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCCCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence            4568899999999999985321 244 445554

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.93  E-value=2e-24  Score=179.30  Aligned_cols=219  Identities=21%  Similarity=0.220  Sum_probs=158.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Cc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GC   77 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (319)
                      +|.+|||||++.||++++++|+++|++|++.+|++++. ....+++...+.++.++.+|++|.++++++++       .+
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA-KAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            35679999999999999999999999999999986542 23334444445688999999999999988764       57


Q ss_pred             ceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----C-CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           78 NGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----A-KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        78 d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      |++|||||......    ..+.++..+++|+.++.++++++.+    . ...+||++||.++..+.+.            
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------------  147 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------  147 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc------------
Confidence            99999999754322    2234678899999999999988754    2 3457999999877654432            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHH--hcCccc------
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL--KEGYES------  217 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~------  217 (319)
                               ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++...       .......  .+....      
T Consensus       148 ---------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~-------~~~~~~~~~~~~~~~~~~~~~  211 (255)
T d1gega_         148 ---------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA-------EIDRQVSEAAGKPLGYGTAEF  211 (255)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH-------HHHHHHHHHHTCCTTHHHHHH
T ss_pred             ---------cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHh-------hhhhhhHhhhcccchhHHHHH
Confidence                     566999999999988887654   4899999999999765321       1111111  111100      


Q ss_pred             -cCCcccccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          218 -LENKLRMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       218 -~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                       ...+...+..++|+|+++++++.....  .| ...++|
T Consensus       212 ~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         212 AKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             HTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecC
Confidence             011456688999999999999975432  44 445554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.92  E-value=1.7e-24  Score=180.32  Aligned_cols=229  Identities=14%  Similarity=0.143  Sum_probs=162.0

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh-hccCCCeEEEEccCCChhhHHHHhc----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL-EKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      |++++|++|||||++.||++++++|+++|++|++++|+.++... ..+++ ...+.++.++.+|++|+++++++++    
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE-VTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH-HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            67889999999999999999999999999999999998775422 22222 2235678999999999999988774    


Q ss_pred             ---CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ---GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA-----KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                         .+|++|||||......    ..+.++..+++|+.++..+.+++.+.     +..+++..||.........     .+
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~-----~~  158 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----SL  158 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----ET
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc-----cc
Confidence               4799999999754431    22345778999999999988877542     4456777777543322110     00


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                               .+......|+.+|.+.+.+.+.++.+   +|+++..|.||.+-++....   .............      
T Consensus       159 ---------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~------  220 (260)
T d1h5qa_         159 ---------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH---MDKKIRDHQASNI------  220 (260)
T ss_dssp             ---------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTC------
T ss_pred             ---------ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc---cCHHHHHHHHhcC------
Confidence                     00012466999999999888887654   48999999999998765432   2233333333332      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      +...+..++|+|.++++++....  ..| .+.++|.
T Consensus       221 pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         221 PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence            34567899999999999996543  245 4566553

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=2.3e-24  Score=179.38  Aligned_cols=221  Identities=16%  Similarity=0.126  Sum_probs=155.8

Q ss_pred             CCCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            2 ALEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      ++++|++|||||+|  .||++++++|+++|++|++.+|+...  ....++......+..++.+|++|.++++++++    
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL--RPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHH--HHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            58899999999998  89999999999999999988887542  22222332334567889999999999888764    


Q ss_pred             ---CcceEEEecccCCCC--------CCCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 ---GCNGVFHIACPAPST--------TVPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~--------~~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                         .+|++||||+.....        ...+.+...+++|+.++..+++++...  .-++||++||..+..+.+.      
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~------  156 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK------  156 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT------
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC------
Confidence               479999999864321        111224567899999999999988755  2258999999877655432      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.+|.+.+.+.+.++.+   +|+++..+.||.+.++...... ..........+..     
T Consensus       157 ---------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~-----  215 (256)
T d1ulua_         157 ---------------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTA-----  215 (256)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHS-----
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcC-----
Confidence                           566999999999988887765   4899999999999876543321 1123333333333     


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       +.+.+..++|+|+++++++....  ..| .+.++|
T Consensus       216 -pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         216 -PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDA  250 (256)
T ss_dssp             -TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence             34557899999999999997543  245 345544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.92  E-value=8.5e-25  Score=190.59  Aligned_cols=226  Identities=14%  Similarity=0.077  Sum_probs=161.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh-hHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD-SVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~vi~   82 (319)
                      ++|+|+|||||||||++++++|+++||+|+++.|++++.....+..    .++++++.+|++|.. .+..++.++|.+++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~----~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~   77 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   77 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT----STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcc----cCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence            5689999999999999999999999999999999887654333322    358999999999865 46778888998887


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHH
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYC  162 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  162 (319)
                      +...            ....|+..+.+++++|.+.+++++|+.||.........                   .+..+|.
T Consensus        78 ~~~~------------~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~-------------------~~~~~~~  126 (350)
T d1xgka_          78 NTTS------------QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-------------------WPAVPMW  126 (350)
T ss_dssp             CCCS------------TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-------------------CCCCTTT
T ss_pred             eccc------------ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc-------------------ccchhhh
Confidence            6421            12346777899999999999988888898653332211                   1134478


Q ss_pred             hhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc----cccCCcccccccH-HHHHHHHHH
Q 020924          163 LSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY----ESLENKLRMIVDV-RDVAEALLL  237 (319)
Q Consensus       163 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D~a~~~~~  237 (319)
                      .+|...+.++.+    .+++++++||+.+++............  .....+..    ...++....|+++ +|+++++..
T Consensus       127 ~~k~~~~~~~~~----~~~~~~~vr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         127 APKFTVENYVRQ----LGLPSTFVYAGIYNNNFTSLPYPLFQM--ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             HHHHHHHHHHHT----SSSCEEEEEECEEGGGCBSSSCSSCBE--EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHh----hccCceeeeeceeeccccccccccccc--cccccccceeeecccCCCcceEEEeHHHHHHHHHH
Confidence            888877776554    478999999999887543222111000  00111111    1135566778876 799999999


Q ss_pred             hhccCC--C-CceEEEecccCCHHHHHHHHHHhCCC
Q 020924          238 AYEKAE--A-EGRYICTAHMIRARDLVDKLKSLYPN  270 (319)
Q Consensus       238 ~~~~~~--~-~~~~~~~~~~~s~~e~~~~~~~~~g~  270 (319)
                      ++....  . +.+|++++..+|++|+++.+.+++|+
T Consensus       201 ~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~  236 (350)
T d1xgka_         201 IFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  236 (350)
T ss_dssp             HHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             HHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCC
Confidence            986542  2 33788888889999999999999873

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-24  Score=178.61  Aligned_cols=201  Identities=16%  Similarity=0.128  Sum_probs=154.6

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++.||+++||||++.||++++++|+++|++|++.+|+.++. ....+++...+.++..+.+|++|.+++.++++     
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l-~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL-EETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999986542 23334444456789999999999999888764     


Q ss_pred             --CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCC
Q 020924           76 --GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDE  145 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  145 (319)
                        .+|++|||||........    +.++.++++|+.++.++++++.+    .+..+||++||..+..+.+.         
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~---------  152 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF---------  152 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH---------
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC---------
Confidence              479999999977554321    23467899999999999887754    45679999999887654431         


Q ss_pred             CCCCCccccccCCchHHhhHHHHHHHHHHhhhh------CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          146 TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK------TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       146 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                  ...|+.||.+.+.+.+.++.+      .|++++.+.||.+-++.....    ..              
T Consensus       153 ------------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~----~~--------------  202 (244)
T d1yb1a_         153 ------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----ST--------------  202 (244)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----HH--------------
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc----Cc--------------
Confidence                        456999999999888887654      379999999999977653321    00              


Q ss_pred             CcccccccHHHHHHHHHHhhccC
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                       ....++.++|+|+.+...+...
T Consensus       203 -~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         203 -SLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             -HHCCCCCHHHHHHHHHHHHHTT
T ss_pred             -cccCCCCHHHHHHHHHHHHhcC
Confidence             1123467899999999887654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.92  E-value=4.7e-24  Score=175.19  Aligned_cols=198  Identities=15%  Similarity=0.157  Sum_probs=152.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCe-------EEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYF-------VHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---   75 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (319)
                      +.||||||++.||++++++|+++|++       |++.+|+.+.. .....++...+.++.++.+|++|.++++++++   
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l-~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL-EKISLECRAEGALTDTITADISDMADVRRLTTHIV   80 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH-HHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999987       88888876532 23334444455678899999999999888764   


Q ss_pred             ----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCccc
Q 020924           76 ----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                          .+|++|||||......    ..+.++..+++|+.++..+++++.+.    +-++||++||.++..+.++       
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-------  153 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH-------  153 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCC-------
Confidence                4799999999765432    22345788999999999998888643    5569999999887665432       


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                    ...|+.||.+.+.+.+.++.+   +|++++.+.||.+.++.......                  .
T Consensus       154 --------------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~------------------~  201 (240)
T d2bd0a1         154 --------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------------E  201 (240)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------------T
T ss_pred             --------------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH------------------h
Confidence                          466999999999888887654   58999999999998875432210                  1


Q ss_pred             cccccccHHHHHHHHHHhhccCC
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ....+..++|+|+++++++..+.
T Consensus       202 ~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         202 MQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             hHhcCCCHHHHHHHHHHHHcCCc
Confidence            12245689999999999998764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.92  E-value=1.1e-23  Score=175.24  Aligned_cols=225  Identities=20%  Similarity=0.111  Sum_probs=162.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ++||+||||||++.||.+++++|+++|++|++..|+..+......+++...+.++.++.+|++|.++++++++       
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999887766554334445555556688999999999999988765       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccc-cCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVG-LNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~-~~~~~~~~~~~~E~~~  148 (319)
                      .+|++||+||......    ..+.++..+++|+.+..++++++.++.  -++++.++|..+.. +.++            
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~------------  151 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN------------  151 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS------------
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC------------
Confidence            4799999999765432    223357889999999999999998752  23677776654322 2221            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCC---------CCCCCccHHHH-HHHHhcCc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLL---------QSKVNTSSLVL-IKLLKEGY  215 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~---------~~~~~~~~~~~-~~~~~~~~  215 (319)
                               ...|+.+|.+.+.+++.++.+   +|+++..|.||.+.++..         ..........+ ..+.... 
T Consensus       152 ---------~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  221 (259)
T d1ja9a_         152 ---------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN-  221 (259)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS-
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC-
Confidence                     456999999999888888765   489999999999976421         01111222222 2233332 


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEeccc
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAHM  254 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~  254 (319)
                           +.+.+..++|+|+++++++....  ..| ...++|..
T Consensus       222 -----pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         222 -----PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence                 35568899999999999998654  245 44666543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.2e-24  Score=177.95  Aligned_cols=220  Identities=16%  Similarity=0.106  Sum_probs=157.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc------
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +||++|||||++.||++++++|+++|++|++++|+.++.. ....++..  .+.++.++.+|++|.++++++++      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV-QCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999999999866432 22222222  13478899999999999988764      


Q ss_pred             -CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC----C---CCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 -GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA----K---VKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~----~---~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       .+|++|||||....    ++++..+++|+.++.++..++.+.    +   ..+||++||.++..+.+.           
T Consensus        81 G~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~-----------  145 (254)
T d2gdza1          81 GRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-----------  145 (254)
T ss_dssp             SCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-----------
T ss_pred             CCcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC-----------
Confidence             57999999997654    456899999999998888888643    1   247999999887665432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHH--hhh---hCCceEEEEecCcccCCCCCCCCCc-----cHHHHHHHHhcCccc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALE--FGK---KTGLDVVTICPNLVLGPLLQSKVNT-----SSLVLIKLLKEGYES  217 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~--~~~---~~~~~~~~lrp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~  217 (319)
                                ...|+.||.+.+.+.+.  ++.   .+|++++.|.||.+-++........     ...........    
T Consensus       146 ----------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----  211 (254)
T d2gdza1         146 ----------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM----  211 (254)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH----
T ss_pred             ----------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhc----
Confidence                      45699999999988764  222   3589999999999976532111000     00000000000    


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCCCCc-eEEEec-ccC
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAEAEG-RYICTA-HMI  255 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~-~~~  255 (319)
                        -+...+..++|+|+++++++.+....| ...++| ..+
T Consensus       212 --~p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~  249 (254)
T d2gdza1         212 --IKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGI  249 (254)
T ss_dssp             --HHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEE
T ss_pred             --CCCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCee
Confidence              023456789999999999998765566 445554 443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.2e-24  Score=176.80  Aligned_cols=214  Identities=18%  Similarity=0.185  Sum_probs=152.2

Q ss_pred             CC-CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc--CCCeEEEEccCCChhhHHHHhc--
Q 020924            1 MA-LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA--SENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      |+ +++|++|||||++.||+++++.|+++|++|++.+|+..+. ....+++...  ..++.++.+|++++++++++++  
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l-~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI-EELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            66 7889999999999999999999999999999999986532 2233333332  2468889999999999888764  


Q ss_pred             -----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CC--CCEEEEeccccccccCCCCCCC
Q 020924           76 -----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AK--VKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~--~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                           .+|++|||||......    ..+.++..+++|+.++..+.+++.+    .+  -.+||++||.++....+.    
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~----  159 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL----  159 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC----
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC----
Confidence                 5799999999765432    2234577899999999998877743    33  369999999876533221    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhh-----hCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK-----KTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGY  215 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-----~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  215 (319)
                                     .....|+.+|.+.+.+.+.++.     .+++++..|.||.+-++...........   .....  
T Consensus       160 ---------------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~---~~~~~--  219 (257)
T d1xg5a_         160 ---------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPE---KAAAT--  219 (257)
T ss_dssp             ---------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHH---HHHHH--
T ss_pred             ---------------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHH---HHHhc--
Confidence                           1145599999999999887764     3589999999998865431111000011   11110  


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCC
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~  243 (319)
                          .....++.++|+|+++++++..+.
T Consensus       220 ----~~~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         220 ----YEQMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             ----HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             ----CCCCCCcCHHHHHHHHHHHhCChh
Confidence                134557899999999999997654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=8.9e-24  Score=177.04  Aligned_cols=226  Identities=13%  Similarity=0.116  Sum_probs=155.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.++. ....+++..   ...++.++.+|++|+++++++++    
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l-~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERL-EETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999986532 222222222   23468999999999999888764    


Q ss_pred             ---CcceEEEecccCCCCCC----CC----ccchhhhhHHHHHHHHHHHHHhC---CCCEEEEecc-ccccccCCCCCCC
Q 020924           76 ---GCNGVFHIACPAPSTTV----PN----PQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSS-GVAVGLNPRWPKG  140 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~~----~~----~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS-~~~~~~~~~~~~~  140 (319)
                         .+|++|||||.......    .+    .+...+++|+.++.++++++.+.   +...+|+++| .+...+.++    
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~----  157 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD----  157 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS----
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCC----
Confidence               57999999997654321    11    25667899999999999988654   2335666655 343433321    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCcc--HHHHHHHHhcCc
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTS--SLVLIKLLKEGY  215 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~--~~~~~~~~~~~~  215 (319)
                                       ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+-++.........  ............
T Consensus       158 -----------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (272)
T d1xkqa_         158 -----------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK  220 (272)
T ss_dssp             -----------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT
T ss_pred             -----------------cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHh
Confidence                             466999999999988888755   5899999999999876432211110  011111111110


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccC--C-CCc-eEEEec
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKA--E-AEG-RYICTA  252 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~--~-~~~-~~~~~~  252 (319)
                        ...+...+..++|+|+++++++..+  . ..| .+.++|
T Consensus       221 --~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         221 --ECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             --TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             --cCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence              1114556889999999999999643  2 345 445554

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.92  E-value=5e-24  Score=177.89  Aligned_cols=222  Identities=13%  Similarity=0.134  Sum_probs=152.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.++. ....+++..   ...++.++.+|++|.++++++++    
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERL-EETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999986542 222223322   23468999999999999988764    


Q ss_pred             ---CcceEEEecccCCCCC--------CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEecccc-ccccCCCCCCC
Q 020924           76 ---GCNGVFHIACPAPSTT--------VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGV-AVGLNPRWPKG  140 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~--------~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~-~~~~~~~~~~~  140 (319)
                         .+|++|||||......        ..+.|+..+++|+.++..+++++.+.   +..++|+++|.. ...+.+.    
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~----  157 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD----  157 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT----
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC----
Confidence               5799999999653211        12335778999999999999988754   234677666654 3333321    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC------CccHHHHHHHH
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV------NTSSLVLIKLL  211 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~  211 (319)
                                       ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+-++......      ...........
T Consensus       158 -----------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (264)
T d1spxa_         158 -----------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK  220 (264)
T ss_dssp             -----------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH
T ss_pred             -----------------chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHH
Confidence                             456999999999888887665   4899999999999877543211      01111111222


Q ss_pred             hcCccccCCcccccccHHHHHHHHHHhhccCC---CCc-eEEEec
Q 020924          212 KEGYESLENKLRMIVDVRDVAEALLLAYEKAE---AEG-RYICTA  252 (319)
Q Consensus       212 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~~~~  252 (319)
                      +..      +...+..++|+|+++++++..+.   ..| .+.++|
T Consensus       221 ~~~------Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDG  259 (264)
T d1spxa_         221 ECV------PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG  259 (264)
T ss_dssp             HHC------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             hcC------CCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence            221      34567899999999999996431   345 455554

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.91  E-value=1.7e-23  Score=173.15  Aligned_cols=220  Identities=16%  Similarity=0.083  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|+++||||++.||++++++|+++|++|++.+|+.+.. ....+++   +.+..++.+|++|.++++++++       
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG-QQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999999876432 2222332   3578889999999998888764       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .+|++|||||......    ..+.++..+++|+.++..+++++.+.   .-.+||++||.++..+.+.            
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~------------  147 (253)
T d1hxha_          80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ------------  147 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT------------
T ss_pred             CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccc------------
Confidence            5799999999765432    12346788999999999999988753   2369999999887654431            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCC--CccHHHHHHHHhcCccccCCc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKV--NTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  221 (319)
                               ...|+.+|.+.+.+.+.++.+     ++++++.|.||.+.++......  ...    ........  .-..
T Consensus       148 ---------~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~----~~~~~~~~--~~~~  212 (253)
T d1hxha_         148 ---------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDP--KLNR  212 (253)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBT--TTBT
T ss_pred             ---------cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhh----HHHHHhCc--cccc
Confidence                     466999999999888876543     4699999999999765311000  000    01111100  0113


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                      ...+..++|+|+++++++....  ..| ...++|.
T Consensus       213 ~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            4467899999999999997543  245 4566554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.91  E-value=7.2e-24  Score=177.88  Aligned_cols=222  Identities=19%  Similarity=0.134  Sum_probs=157.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |.+++|++|||||++.||++++++|+++|++|++++|+.++.. ....+.   +.++..+.+|+++.++++++++     
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~-~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLA-ELETDH---GDNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHc---CCCeeEEecccccHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999865321 122222   3578999999999998888764     


Q ss_pred             --CcceEEEecccCCCCCC-----CC----ccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCc
Q 020924           76 --GCNGVFHIACPAPSTTV-----PN----PQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~-----~~----~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                        .+|++|||||.......     .+    .++..+++|+.++..+++++.+.   +-.++|++||..+..+.++     
T Consensus        77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~-----  151 (276)
T d1bdba_          77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGG-----  151 (276)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSS-----
T ss_pred             hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCC-----
Confidence              57999999996543211     11    25678999999999998888643   2258999999776654432     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhhC--CceEEEEecCcccCCCCCCCCCcc-H-----HHHHHHHhc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKKT--GLDVVTICPNLVLGPLLQSKVNTS-S-----LVLIKLLKE  213 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~G~~~~~~~~~~-~-----~~~~~~~~~  213 (319)
                                      ...|+.+|.+.+.+.+.++.+.  ++++..|.||.|.++......... .     ..+.+....
T Consensus       152 ----------------~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (276)
T d1bdba_         152 ----------------GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKS  215 (276)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTT
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHh
Confidence                            4569999999998888776653  499999999999876533221000 0     001111111


Q ss_pred             CccccCCcccccccHHHHHHHHHHhhccC---CCCc-eEEEec
Q 020924          214 GYESLENKLRMIVDVRDVAEALLLAYEKA---EAEG-RYICTA  252 (319)
Q Consensus       214 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~~~~~~  252 (319)
                           ..+...+..++|+|.++++++..+   -..| .+.++|
T Consensus       216 -----~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         216 -----VLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             -----TCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             -----cCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence                 114556788999999999988532   2345 445554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-23  Score=177.27  Aligned_cols=221  Identities=13%  Similarity=0.097  Sum_probs=157.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-----ccCCCeEEEEccCCChhhHHHHhc--
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-----KASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.++.. ...+++.     ..+.++..+.+|++|.++++++++  
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~-~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK-SAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999999865432 1222222     123578999999999999888764  


Q ss_pred             -----CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 -----GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                           .+|++||||+......    ..+.++..+++|+.++..+++++.+.    +..++|++||.. ..+.+.      
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~-~~~~~~------  161 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL------  161 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccc-cccccc------
Confidence                 5799999998654332    22346778999999999999988643    445788887633 222221      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCcc-HHHHHHHHhcCcccc
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTS-SLVLIKLLKEGYESL  218 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~  218 (319)
                                     ...|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++......... ..+.......     
T Consensus       162 ---------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-----  221 (297)
T d1yxma1         162 ---------------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK-----  221 (297)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG-----
T ss_pred             ---------------cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc-----
Confidence                           466999999999999888765   4899999999999877543221110 0111111111     


Q ss_pred             CCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       .+...+..++|+|.++++++....  ..| ...++|
T Consensus       222 -~plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDG  257 (297)
T d1yxma1         222 -IPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG  257 (297)
T ss_dssp             -STTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCc
Confidence             144568899999999999997543  245 456655

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.91  E-value=9.3e-23  Score=170.97  Aligned_cols=227  Identities=15%  Similarity=0.088  Sum_probs=162.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++++|++|||||++.||++++++|+++|++|++.+|+..+......+++...+.++.++.+|++|++++.+.++     
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            358899999999999999999999999999999999876654334444454556789999999999999988765     


Q ss_pred             --CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 --GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEAK--VKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                        .+|++||+++......    ..+.+...+++|+.++..+++++.+..  -+++++++|........            
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~------------  161 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV------------  161 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC------------
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc------------
Confidence              4799999999765432    123357788999999999999998752  34788888865432111            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCC--------CCCCccHHHHHH--HHhcC
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQ--------SKVNTSSLVLIK--LLKEG  214 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~--------~~~~~~~~~~~~--~~~~~  214 (319)
                              .....|+.+|.+.+.+++.++.+   +|++++.|.||.+-++...        ............  .....
T Consensus       162 --------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (272)
T d1g0oa_         162 --------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS  233 (272)
T ss_dssp             --------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC
T ss_pred             --------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC
Confidence                    11466999999999998887665   4899999999999765210        000111111111  11111


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhccCC--CCce-EEEecc
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEKAE--AEGR-YICTAH  253 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~  253 (319)
                            +...+..++|+|.++++++....  ..|. ..++|.
T Consensus       234 ------PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         234 ------PLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             ------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence                  34568899999999999997543  2453 455543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.91  E-value=2.9e-23  Score=174.00  Aligned_cols=226  Identities=13%  Similarity=0.098  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhc----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +++|+++||||++.||++++++|+++|++|++.+|+.++. ....+++..   ...++.++.+|++|.++++++++    
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRL-EETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999986532 222222322   23468999999999999888764    


Q ss_pred             ---CcceEEEecccCCCCC------CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 ---GCNGVFHIACPAPSTT------VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~------~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                         .+|++|||||......      ..+.++..+++|+.++..+.+++.+.    +..+++++||.+...+.++      
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~------  154 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG------  154 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCC------
Confidence               4799999999653321      11235778999999999998888643    4557888888665443321      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCC--ccHHHHHHHHhcCccc
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVN--TSSLVLIKLLKEGYES  217 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~  217 (319)
                                     ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++.......  ............... 
T Consensus       155 ---------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-  218 (274)
T d1xhla_         155 ---------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE-  218 (274)
T ss_dssp             ---------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT-
T ss_pred             ---------------CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHc-
Confidence                           456999999999888877654   48999999999998764321110  001111111111110 


Q ss_pred             cCCcccccccHHHHHHHHHHhhccC--C-CCc-eEEEec
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKA--E-AEG-RYICTA  252 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~--~-~~~-~~~~~~  252 (319)
                       .-+...+..++|+|+++++++..+  . ..| ...++|
T Consensus       219 -~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         219 -CIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             -TCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             -CCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence             114456789999999999999632  1 345 455654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.91  E-value=5.6e-23  Score=168.87  Aligned_cols=215  Identities=17%  Similarity=0.154  Sum_probs=158.5

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.++. ....++   .+.++.++++|++++++++++++       
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL-AEAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999986532 222232   24678899999999999987764       


Q ss_pred             CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           76 GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      .+|++||||+......    ..+.+...+++|+.++..+.+++.+.  ..+.++++||.+.. ..+              
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-~~~--------------  143 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF--------------  143 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH--------------
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-ccc--------------
Confidence            4799999998764432    12345788999999999999998765  23356665554322 111              


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIV  226 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (319)
                             ....|+.+|.+.|.+.+.++++   +|+++..|.||.+-++...   ........+..+..      +...+.
T Consensus       144 -------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~---~~~~~~~~~~~~~~------p~~r~~  207 (241)
T d2a4ka1         144 -------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA---GLPPWAWEQEVGAS------PLGRAG  207 (241)
T ss_dssp             -------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT---TSCHHHHHHHHHTS------TTCSCB
T ss_pred             -------CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH---hhhHhHHHHHHhCC------CCCCCc
Confidence                   1456999999999999998776   3799999999999776533   22344444444433      345678


Q ss_pred             cHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          227 DVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       227 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .++|+|+++++++....  ..| ...++|
T Consensus       208 ~p~dva~~v~fL~S~~s~~itG~~i~vDG  236 (241)
T d2a4ka1         208 RPEEVAQAALFLLSEESAYITGQALYVDG  236 (241)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhcchhCCCcCceEEeCC
Confidence            99999999999997543  345 445554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=4.3e-23  Score=168.96  Aligned_cols=211  Identities=12%  Similarity=0.069  Sum_probs=152.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh-hhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY-DSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vi   81 (319)
                      +++|++|||||++.||++++++|+++|++|++.+|+.+.     +++     ...+++.+|+++. +.+.+.+.++|++|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~-----l~~-----~~~~~~~~Dv~~~~~~~~~~~g~iD~lV   71 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-----LKR-----SGHRYVVCDLRKDLDLLFEKVKEVDILV   71 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHH-----TCSEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-----HHh-----cCCcEEEcchHHHHHHHHHHhCCCcEEE
Confidence            689999999999999999999999999999999997532     222     2457788999863 45555666899999


Q ss_pred             EecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCCccc
Q 020924           82 HIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEY  153 (319)
Q Consensus        82 ~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  153 (319)
                      ||||......    ..+.++..+++|+.++..+++++.+    .+..++|++||.....+.+                  
T Consensus        72 nnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~------------------  133 (234)
T d1o5ia_          72 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE------------------  133 (234)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------------
T ss_pred             ecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccc------------------
Confidence            9999654321    2233577889999999888888754    3556999999976654432                  


Q ss_pred             cccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHH
Q 020924          154 CRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRD  230 (319)
Q Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  230 (319)
                         ....|+.+|.+.+.+.+.++.+   +|+++..|.||.+.++.....  .............      +...+..++|
T Consensus       134 ---~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~~------pl~R~~~ped  202 (234)
T d1o5ia_         134 ---NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL--LSEEKKKQVESQI------PMRRMAKPEE  202 (234)
T ss_dssp             ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH--SCHHHHHHHHTTS------TTSSCBCHHH
T ss_pred             ---ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhh--cCHHHHHHHHhcC------CCCCCcCHHH
Confidence               1456999999999888877654   489999999999977643211  0111112222111      4566889999


Q ss_pred             HHHHHHHhhccCCC--Cc-eEEEec
Q 020924          231 VAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       231 ~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      +|.++++++.....  .| ...++|
T Consensus       203 iA~~v~fL~S~~s~~itG~~i~vDG  227 (234)
T d1o5ia_         203 IASVVAFLCSEKASYLTGQTIVVDG  227 (234)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhChhhcCCcCcEEEECc
Confidence            99999999965432  45 445554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.8e-23  Score=171.13  Aligned_cols=219  Identities=18%  Similarity=0.140  Sum_probs=158.7

Q ss_pred             CC-CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc---C
Q 020924            1 MA-LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV---G   76 (319)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~   76 (319)
                      |+ +++|++|||||++.||+++++.|+++|++|++.+|++++     ++++.. ..+++...+|+.+.+.++...+   .
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~-----l~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESK-----LQELEK-YPGIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HGGGGG-STTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHh-ccCCceeeeecccccccccccccccc
Confidence            77 889999999999999999999999999999999997542     222222 3568888999988877776554   6


Q ss_pred             cceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHhC----CCCEEEEecccccc-ccCCCCCCCcccCCCC
Q 020924           77 CNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLEA----KVKRVIVVSSGVAV-GLNPRWPKGQIMDETC  147 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~~----~~~~iv~~SS~~~~-~~~~~~~~~~~~~E~~  147 (319)
                      +|++||+||......    ..+.+...+++|+.++..+.+++.+.    +..+||++||..+. .+.+            
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~------------  142 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV------------  142 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT------------
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCcc------------
Confidence            899999999765432    22346778999999999999888653    55699999986542 2211            


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCC---CCccHHHHHHHHhcCccccCCc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSK---VNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                               ....|+.+|.+.+.+++.++.+   +|+++..|.||.+.++.....   ...............      +
T Consensus       143 ---------~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~------p  207 (245)
T d2ag5a1         143 ---------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ------K  207 (245)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC------T
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcC------C
Confidence                     1567999999999999888765   489999999999987642110   001111222222222      4


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCce-EEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEGR-YICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~  252 (319)
                      ...+..++|+|+++.+++....  ..|. +.++|
T Consensus       208 l~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         208 TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             CCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            5568899999999999997543  2453 45554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.90  E-value=1.3e-22  Score=172.21  Aligned_cols=223  Identities=14%  Similarity=0.067  Sum_probs=155.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh-ccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE-KASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      ++++|++|||||||.||++++++|+++|++|++++|+..+... ..+++. ..+..+..+.+|+++.++++++++     
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~-~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKA-TAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH-HHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            5788999999999999999999999999999999998664322 222222 224678899999999999887653     


Q ss_pred             --CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCcccC
Q 020924           76 --GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLE-----AKVKRVIVVSSGVAVGLNPRWPKGQIMD  144 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~-----~~~~~iv~~SS~~~~~~~~~~~~~~~~~  144 (319)
                        .+|++|||||........    +.+...+.+|+.+...+...+..     .....++.+||.....+.+.        
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~--------  172 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF--------  172 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT--------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc--------
Confidence              579999999976543211    12355677888887777665532     23457888888665554331        


Q ss_pred             CCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCc
Q 020924          145 ETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENK  221 (319)
Q Consensus       145 E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (319)
                                   ..+|+.+|.+.+.+++.++.+   +|+++..|.||.+.++....................      +
T Consensus       173 -------------~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~------p  233 (294)
T d1w6ua_         173 -------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI------P  233 (294)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC------T
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcC------C
Confidence                         456999999999999988755   489999999999988754332222222233333222      3


Q ss_pred             ccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          222 LRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       222 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      .+.+..++|+|.++.+++....  ..| ...++|
T Consensus       234 l~R~~~pediA~~v~fL~sd~s~~itG~~i~vDG  267 (294)
T d1w6ua_         234 CGRLGTVEELANLAAFLCSDYASWINGAVIKFDG  267 (294)
T ss_dssp             TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            4567899999999999997543  355 445554

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5e-23  Score=173.40  Aligned_cols=226  Identities=20%  Similarity=0.145  Sum_probs=153.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEE---cCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhc----
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTA---REPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIV----   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~---r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   75 (319)
                      +|.||||||+++||++++++|+++|.+|+.+.   |+.+..  ..+....+...+.++..+.+|++|.+++.++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            46789999999999999999999998755554   433321  112233333445689999999999999998875    


Q ss_pred             -CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCC
Q 020924           76 -GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDET  146 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  146 (319)
                       .+|++||+|+......    ..+.+...+++|+.|+.++++++..    .+-++||++||.++..+.+.          
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~----------  151 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF----------  151 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT----------
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC----------
Confidence             3799999999765442    2234577889999999999988754    46679999999887765532          


Q ss_pred             CCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHH--------HHHHhcCc
Q 020924          147 CWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVL--------IKLLKEGY  215 (319)
Q Consensus       147 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~--------~~~~~~~~  215 (319)
                                 ..+|+.||.+.+.+.+.++.+   +|++++.|.||.+-++.............        .+..+...
T Consensus       152 -----------~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (285)
T d1jtva_         152 -----------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA  220 (285)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHH
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHH
Confidence                       566999999999888877654   48999999999998775433221111111        11100000


Q ss_pred             cccCCcccccccHHHHHHHHHHhhccCCCCceEEEe
Q 020924          216 ESLENKLRMIVDVRDVAEALLLAYEKAEAEGRYICT  251 (319)
Q Consensus       216 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  251 (319)
                      ....-.......++|+|++++++++.+...-+|..+
T Consensus       221 ~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g  256 (285)
T d1jtva_         221 HSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (285)
T ss_dssp             HHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence            000001223568999999999999877654455543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=6.7e-23  Score=173.66  Aligned_cols=198  Identities=16%  Similarity=0.082  Sum_probs=146.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh-------h-HHHHHhhhccCCCeEEEEccCCChhhHHH
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE-------K-NARLYELEKASENLKLFKADLLDYDSVKS   72 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (319)
                      |.+++|++|||||+++||++++++|+++|++|++.+|+.+..       . ....+++.   .....+.+|++|.+++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR---RRGGKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH---HTTCEEEEECCCGGGHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh---hcccccccccchHHHHHH
Confidence            788999999999999999999999999999999998864321       1 11122222   233455678888877776


Q ss_pred             Hhc-------CcceEEEecccCCCCC----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCC
Q 020924           73 AIV-------GCNGVFHIACPAPSTT----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRW  137 (319)
Q Consensus        73 ~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~  137 (319)
                      +++       .+|++|||||......    ..+.++..+++|+.++.++++++.+    .+-++||++||.++..+.++ 
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~-  158 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG-  158 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC-
Confidence            553       5899999999765432    1234678899999999999998764    35579999999988776542 


Q ss_pred             CCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcC
Q 020924          138 PKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEG  214 (319)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~  214 (319)
                                          ...|+.||.+.+.+.+.++.+   +|++++.|.|+.+-.......    .          
T Consensus       159 --------------------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~----~----------  204 (302)
T d1gz6a_         159 --------------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM----P----------  204 (302)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS----C----------
T ss_pred             --------------------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC----c----------
Confidence                                466999999999888887665   489999999997743321111    1          


Q ss_pred             ccccCCcccccccHHHHHHHHHHhhcc
Q 020924          215 YESLENKLRMIVDVRDVAEALLLAYEK  241 (319)
Q Consensus       215 ~~~~~~~~~~~i~v~D~a~~~~~~~~~  241 (319)
                           +....++.++|+|.++++++..
T Consensus       205 -----~~~~~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         205 -----EDLVEALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             -----HHHHHHSCGGGTHHHHHHHTST
T ss_pred             -----HhhHhcCCHHHHHHHHHHHcCC
Confidence                 1122345789999999999863

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.89  E-value=1.4e-21  Score=161.52  Aligned_cols=172  Identities=21%  Similarity=0.259  Sum_probs=129.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH---HCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            5 KERVCVTGAGGFLASWVVKLLL---SRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~---~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      ||+|||||||+.||.+++++|+   ++|++|++.+|+.++.  ..+.++...+.++.++.+|++|.++++++++      
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA--KELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC--HHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            6799999999999999999997   4799999999997753  2333333345789999999999988886643      


Q ss_pred             ---CcceEEEecccCCCCC-C----CCccchhhhhHHHHHHHHHHHHHhC---------------CCCEEEEeccccccc
Q 020924           76 ---GCNGVFHIACPAPSTT-V----PNPQMELLEPAVKGTLNVVKACLEA---------------KVKRVIVVSSGVAVG  132 (319)
Q Consensus        76 ---~~d~vi~~a~~~~~~~-~----~~~~~~~~~~Nv~~~~~l~~~~~~~---------------~~~~iv~~SS~~~~~  132 (319)
                         .+|++|||||...... .    .+.++..+++|+.++..+++++...               +..++|++||..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence               3799999999754431 1    1224568899999999998887532               346899999976543


Q ss_pred             cCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCC
Q 020924          133 LNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLL  196 (319)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~  196 (319)
                      ....                  ......|+.||.+...+.+.++.+   +|++++.+.||.+-++..
T Consensus       160 ~~~~------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~  208 (248)
T d1snya_         160 QGNT------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  208 (248)
T ss_dssp             TTCC------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             CCCC------------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcc
Confidence            2110                  011456999999998888877644   489999999999987754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.88  E-value=2.4e-22  Score=166.37  Aligned_cols=212  Identities=14%  Similarity=0.057  Sum_probs=151.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------Ccce
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------GCNG   79 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   79 (319)
                      ++|||||+++||++++++|+++|++|++.+|+.+..  ..++...     ..+..+|+++.++++++++       .+|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~--~~~~~~~-----~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK--DELEAFA-----ETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH--HHHHHHH-----HHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHhhh-----CcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999999999876542  2222221     1234578888877776653       5899


Q ss_pred             EEEecccCCCC-C----CCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCcccCCCCCCC
Q 020924           80 VFHIACPAPST-T----VPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSD  150 (319)
Q Consensus        80 vi~~a~~~~~~-~----~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  150 (319)
                      +|||||..... .    ..+.++..+++|+.++..+++++.+    .+-.+||++||.++..+.++              
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~--------------  140 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE--------------  140 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT--------------
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc--------------
Confidence            99999865332 1    1233567889999999998888754    35579999999877654432              


Q ss_pred             ccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCC-----CccHHHHHHHHhcCccccCCcc
Q 020924          151 KEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKV-----NTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       151 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                             ...|+.||.+.+.+.+.++.+   +|+++..|.||.+.++......     ...........+..      +.
T Consensus       141 -------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~------pl  207 (252)
T d1zmta1         141 -------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT------AL  207 (252)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS------SS
T ss_pred             -------ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcC------CC
Confidence                   466999999999888887655   4899999999999887643321     11122333333322      34


Q ss_pred             cccccHHHHHHHHHHhhccCCC--Cc-eEEEec
Q 020924          223 RMIVDVRDVAEALLLAYEKAEA--EG-RYICTA  252 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  252 (319)
                      ..+..++|+|.++++++.....  .| ...++|
T Consensus       208 ~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdG  240 (252)
T d1zmta1         208 QRLGTQKELGELVAFLASGSCDYLTGQVFWLAG  240 (252)
T ss_dssp             SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            5578999999999999975442  44 445554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=5.8e-22  Score=164.95  Aligned_cols=213  Identities=18%  Similarity=0.086  Sum_probs=151.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHH---CCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhc-
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLS---RDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIV-   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-   75 (319)
                      +|++|+++|||||++||++++++|++   +|++|++++|+.+.. ....+++..  .+.++.++.+|+++.++++++++ 
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l-~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESML-RQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHH-HHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHH-HHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            37889999999999999999999985   799999999976542 222233322  23468899999999998887763 


Q ss_pred             ----------CcceEEEecccCCCCC-------CCCccchhhhhHHHHHHHHHHHHHhCC------CCEEEEeccccccc
Q 020924           76 ----------GCNGVFHIACPAPSTT-------VPNPQMELLEPAVKGTLNVVKACLEAK------VKRVIVVSSGVAVG  132 (319)
Q Consensus        76 ----------~~d~vi~~a~~~~~~~-------~~~~~~~~~~~Nv~~~~~l~~~~~~~~------~~~iv~~SS~~~~~  132 (319)
                                ..|++|||||......       ..+.+...+++|+.++..+.+++.+.-      ..+||++||.++..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence                      2579999998653211       112356789999999999999998652      24899999987766


Q ss_pred             cCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh-CCceEEEEecCcccCCCCCCCC--CccHHHHHH
Q 020924          133 LNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK-TGLDVVTICPNLVLGPLLQSKV--NTSSLVLIK  209 (319)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~lrp~~v~G~~~~~~~--~~~~~~~~~  209 (319)
                      +.++                     ...|+.||.+.+.+.+.++.+ +|++++.|.||.+.++......  .........
T Consensus       162 ~~~~---------------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~  220 (259)
T d1oaaa_         162 PYKG---------------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             CCTT---------------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             CCcc---------------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHH
Confidence            5432                     566999999999999988755 5899999999999876321000  000111111


Q ss_pred             HHhcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          210 LLKEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       210 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      .....      ....+..++|+|++++.++...
T Consensus       221 ~~~~~------~~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         221 LQKLK------SDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHHHH------HTTCSBCHHHHHHHHHHHHHHC
T ss_pred             HHhcC------CCCCCCCHHHHHHHHHHHhhhc
Confidence            11111      2234678999999999998754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.1e-21  Score=158.83  Aligned_cols=208  Identities=20%  Similarity=0.144  Sum_probs=149.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------   75 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (319)
                      +++||++|||||++.||++++++|+++|++|++++|+.+... ...+++   .........|+.+...++....      
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE-AQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHh---CCCccccccccccccccccccccccccc
Confidence            578999999999999999999999999999999999877532 223333   3567888899998877765543      


Q ss_pred             -CcceEEEecccCCCCC----------CCCccchhhhhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccC
Q 020924           76 -GCNGVFHIACPAPSTT----------VPNPQMELLEPAVKGTLNVVKACLEA----------KVKRVIVVSSGVAVGLN  134 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~~----------~~~~~~~~~~~Nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~~~~~  134 (319)
                       ..|.++++++......          ..+.+...+++|+.++.++.+++.+.          +..+||++||.++..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence             4688888876543321          11234677899999999999998653          23489999999877655


Q ss_pred             CCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHH
Q 020924          135 PRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLL  211 (319)
Q Consensus       135 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~  211 (319)
                      ++                     ...|+.+|.+.+.+++.++.+   +|++++.|.||.+.++.....   .........
T Consensus       158 ~~---------------------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~  213 (248)
T d2o23a1         158 VG---------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLA  213 (248)
T ss_dssp             TT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHH
T ss_pred             CC---------------------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC---CHHHHHHHH
Confidence            32                     466999999999999988765   489999999999987754322   111111222


Q ss_pred             hcCccccCCcccccccHHHHHHHHHHhhccC
Q 020924          212 KEGYESLENKLRMIVDVRDVAEALLLAYEKA  242 (319)
Q Consensus       212 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  242 (319)
                      ...+     ....+..++|+|++++++++..
T Consensus       214 ~~~p-----l~~R~g~peevA~~v~fL~s~~  239 (248)
T d2o23a1         214 SQVP-----FPSRLGDPAEYAHLVQAIIENP  239 (248)
T ss_dssp             HTCS-----SSCSCBCHHHHHHHHHHHHHCT
T ss_pred             hcCC-----CCCCCcCHHHHHHHHHHHHhCC
Confidence            2211     1245779999999999998753

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.87  E-value=3.7e-21  Score=160.19  Aligned_cols=207  Identities=19%  Similarity=0.166  Sum_probs=152.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh--hHHHHHhhhccCCCeEEEEccCCChhhHHHHhcC-----
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE--KNARLYELEKASENLKLFKADLLDYDSVKSAIVG-----   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   76 (319)
                      ..+||||||+|.||++++++|+++|+ .|+++.|+..+.  ....+.++...+.++.++.+|++|.+++.++++.     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            46899999999999999999999998 588888864321  2334444444456799999999999999988753     


Q ss_pred             -cceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCcccCCCCCCCc
Q 020924           77 -CNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDK  151 (319)
Q Consensus        77 -~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~  151 (319)
                       +|.|||+++........    +.+...+++|+.++.++.++++..+.++||++||.++..+.++               
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~---------------  153 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG---------------  153 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT---------------
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc---------------
Confidence             69999999976554221    2235578899999999999988888889999999988877653               


Q ss_pred             cccccCCchHHhhHHHHHHHHHHhhhhCCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHH
Q 020924          152 EYCRTTNNWYCLSKTEAESEALEFGKKTGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDV  231 (319)
Q Consensus       152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  231 (319)
                            ...|+.+|...+.+..++..+ |++++.|.||.+.+++....      .+...+..       .....+.++++
T Consensus       154 ------~~~YaAaka~l~~la~~~~~~-Gi~v~~I~pg~~~~~g~~~~------~~~~~~~~-------~G~~~~~~~~~  213 (259)
T d2fr1a1         154 ------LGGYAPGNAYLDGLAQQRRSD-GLPATAVAWGTWAGSGMAEG------PVADRFRR-------HGVIEMPPETA  213 (259)
T ss_dssp             ------CTTTHHHHHHHHHHHHHHHHT-TCCCEEEEECCBC------------------CTT-------TTEECBCHHHH
T ss_pred             ------cHHHHHHHHhHHHHHHHHHhC-CCCEEECCCCcccCCccccc------hHHHHHHh-------cCCCCCCHHHH
Confidence                  345999999999998887664 89999999999876542211      01111100       11235789999


Q ss_pred             HHHHHHhhccCCCCc
Q 020924          232 AEALLLAYEKAEAEG  246 (319)
Q Consensus       232 a~~~~~~~~~~~~~~  246 (319)
                      ++++..++.......
T Consensus       214 ~~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         214 CRALQNALDRAEVCP  228 (259)
T ss_dssp             HHHHHHHHHTTCSSC
T ss_pred             HHHHHHHHhCCCceE
Confidence            999999998765443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-20  Score=157.26  Aligned_cols=203  Identities=15%  Similarity=0.054  Sum_probs=147.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ++||++||||||++||++++++|+++|++|++++|+.++......+.....+..+..+.+|+++........+       
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999986643222111112234567888899998877766543       


Q ss_pred             CcceEEEecccCCCCCCC----CccchhhhhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCcccCCCCC
Q 020924           76 GCNGVFHIACPAPSTTVP----NPQMELLEPAVKGTLNVVKACLEA---KVKRVIVVSSGVAVGLNPRWPKGQIMDETCW  148 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  148 (319)
                      .+|+++|+|+........    +.+...+++|+.++..+.+.+...   +-+++|++||.++..+.+.            
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~------------  159 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM------------  159 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT------------
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC------------
Confidence            579999999876543221    224567899999999998888643   3359999999887665432            


Q ss_pred             CCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCccc
Q 020924          149 SDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLR  223 (319)
Q Consensus       149 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
                               ...|+.||.+.+.+.+.++.+     ++++++.+.||.|-++.           ..+...+.      ...
T Consensus       160 ---------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-----------~~~~~~~~------~~~  213 (269)
T d1xu9a_         160 ---------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----------AMKAVSGI------VHM  213 (269)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----------HHHHSCGG------GGG
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-----------HHHhccCC------ccc
Confidence                     567999999999888887654     46999999999997642           11221111      223


Q ss_pred             ccccHHHHHHHHHHhhccCC
Q 020924          224 MIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       224 ~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ....++++|+.++......+
T Consensus       214 ~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         214 QAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             GCBCHHHHHHHHHHHHHTTC
T ss_pred             cCCCHHHHHHHHHHHhhcCC
Confidence            34678999999988776543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2e-20  Score=155.63  Aligned_cols=220  Identities=15%  Similarity=0.124  Sum_probs=155.6

Q ss_pred             CCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|+||||||+|  .||+++++.|+++|++|++.+|+...  ....+++.........+..|+.+..+....+.     
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL--KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT--HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            5789999999998  89999999999999999999998653  22333333334567888899999887777653     


Q ss_pred             --CcceEEEecccCCCCCCC---------CccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcc
Q 020924           76 --GCNGVFHIACPAPSTTVP---------NPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQI  142 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~---------~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~  142 (319)
                        ..|++||+++........         +.+...+.+|+.+...++.++...  .-+.+|++||.....+.+.      
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~------  154 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------  154 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT------
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC------
Confidence              469999999875433110         112345567788888888877664  2346899999765554331      


Q ss_pred             cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccC
Q 020924          143 MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLE  219 (319)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (319)
                                     ...|+.+|.+.+.+++.++.+   +|++++.|+||.+.++..... ..............     
T Consensus       155 ---------------~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~-----  213 (258)
T d1qsga_         155 ---------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVT-----  213 (258)
T ss_dssp             ---------------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHS-----
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-chhhhHHHHHHhCC-----
Confidence                           456999999999999888765   479999999999988764432 12222333333322     


Q ss_pred             CcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          220 NKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       220 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                       +...+..++|+|.++.+++....  ..| ...++|
T Consensus       214 -pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDG  248 (258)
T d1qsga_         214 -PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  248 (258)
T ss_dssp             -TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -CCCCCcCHHHHHHHHHHHhCchhcCccCceEEECc
Confidence             34457899999999999997543  355 345554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.8e-21  Score=161.36  Aligned_cols=209  Identities=19%  Similarity=0.114  Sum_probs=145.3

Q ss_pred             CCeE-EEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-------
Q 020924            5 KERV-CVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-------   75 (319)
Q Consensus         5 ~~~v-lItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (319)
                      ||+| |||||+++||.+++++|+++ |++|++.+|+.++. ....+++...+.++.++.+|++|.++++++++       
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRG-QAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHH-HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            4555 99999999999999999975 89999999987642 33445555556788999999999999887654       


Q ss_pred             CcceEEEecccCCCCCCCC----ccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCC-------cc
Q 020924           76 GCNGVFHIACPAPSTTVPN----PQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKG-------QI  142 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~----~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~-------~~  142 (319)
                      .+|++|||||........+    .+...+++|+.++..+++++...  .-.++|++||.....+.+.....       ..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccc
Confidence            5799999999765432222    24567899999999999999865  22489999998765432210000       00


Q ss_pred             cCC---------------CCCCCccccccCCchHHhhHHHHHHHHHHhhhh-------CCceEEEEecCcccCCCCCCCC
Q 020924          143 MDE---------------TCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK-------TGLDVVTICPNLVLGPLLQSKV  200 (319)
Q Consensus       143 ~~E---------------~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~~lrp~~v~G~~~~~~~  200 (319)
                      ..+               ....  ..+..+...|+.||.+...+.+.++++       .++.++.+.||.|.++..... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-  237 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVH--QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-  237 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCT--TTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-
T ss_pred             cchhhhccccccchhccccccc--ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-
Confidence            000               0000  001112466999999988777655433       389999999999987653221 


Q ss_pred             CccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhc
Q 020924          201 NTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYE  240 (319)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  240 (319)
                                             -...++|.|+.+++++.
T Consensus       238 -----------------------~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         238 -----------------------ATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             -----------------------CSBCHHHHTHHHHHHHS
T ss_pred             -----------------------ccCCHHHHHHHHHHHHc
Confidence                                   12368999999888764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.85  E-value=2e-20  Score=154.63  Aligned_cols=211  Identities=18%  Similarity=0.196  Sum_probs=141.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |..|+||||||++.||.+++++|+++|+  .|++.+|+.++.  ..+.+.  .+.+++++.+|++|.++++++++     
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~--~~l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH--HHHHHh--hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            4558999999999999999999999995  688888886532  233332  24579999999999988887653     


Q ss_pred             ----CcceEEEecccCCC-CCC----CCccchhhhhHHHHHHHHHHHHHhC---------------CCCEEEEecccccc
Q 020924           76 ----GCNGVFHIACPAPS-TTV----PNPQMELLEPAVKGTLNVVKACLEA---------------KVKRVIVVSSGVAV  131 (319)
Q Consensus        76 ----~~d~vi~~a~~~~~-~~~----~~~~~~~~~~Nv~~~~~l~~~~~~~---------------~~~~iv~~SS~~~~  131 (319)
                          .+|++|||||.... ...    .+.+...+++|+.++.++++++...               ...+++++||....
T Consensus        77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence                27999999996543 111    1224678999999999998887532               12478888886543


Q ss_pred             ccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHH
Q 020924          132 GLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLI  208 (319)
Q Consensus       132 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~  208 (319)
                      .....       .. .      +..+...|+.||.+...+++.++.+   .|++++.+.||.|-++.....         
T Consensus       157 ~~~~~-------~~-~------~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~---------  213 (250)
T d1yo6a1         157 ITDNT-------SG-S------AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN---------  213 (250)
T ss_dssp             STTCC-------ST-T------SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------
T ss_pred             ccCCc-------cc-c------cchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC---------
Confidence            32211       00 0      0112456999999999888887765   489999999999976642111         


Q ss_pred             HHHhcCccccCCcccccccHHHHHHHHHHhhccCCC--CceEEE-ecccC
Q 020924          209 KLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAEA--EGRYIC-TAHMI  255 (319)
Q Consensus       209 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~-~~~~~  255 (319)
                                     ..+.+++.++.++..+.....  .|.|.. .+.+.
T Consensus       214 ---------------~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~  248 (250)
T d1yo6a1         214 ---------------AALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             --------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             ---------------CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeC
Confidence                           124678889988888875433  455533 33444

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=1.4e-20  Score=154.10  Aligned_cols=191  Identities=13%  Similarity=0.105  Sum_probs=139.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh-------c-
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI-------V-   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~-   75 (319)
                      ++|+||||||+|.||++++++|+++|++|++++|+.....           .....+..|..+.+..+...       . 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------cccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999998765321           22334455665554444322       2 


Q ss_pred             -CcceEEEecccCCCC-C-CC---CccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCC
Q 020924           76 -GCNGVFHIACPAPST-T-VP---NPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETC  147 (319)
Q Consensus        76 -~~d~vi~~a~~~~~~-~-~~---~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~  147 (319)
                       .+|++|||||..... . ..   +.++..+++|+.++.++.+++.++  .-.+||++||.++..+.++           
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-----------  138 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG-----------  138 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----------
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC-----------
Confidence             379999999854322 1 11   224667899999999999999865  2358999999877654432           


Q ss_pred             CCCccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcc
Q 020924          148 WSDKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKL  222 (319)
Q Consensus       148 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (319)
                                ...|+.||.+.+.+.+.++.+     .|++++.+.||.+.++..           +.....      ...
T Consensus       139 ----------~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~------~~~  191 (236)
T d1dhra_         139 ----------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPE------ADF  191 (236)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTT------SCG
T ss_pred             ----------CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-----------hhhCcc------chh
Confidence                      466999999999999998754     379999999999986531           111111      123


Q ss_pred             cccccHHHHHHHHHHhhccCC
Q 020924          223 RMIVDVRDVAEALLLAYEKAE  243 (319)
Q Consensus       223 ~~~i~v~D~a~~~~~~~~~~~  243 (319)
                      ..|+.++|+|+.+.+++....
T Consensus       192 ~~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         192 SSWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTT
T ss_pred             hcCCCHHHHHHHHHHHhCCCc
Confidence            457889999999999987543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.83  E-value=1.1e-19  Score=148.74  Aligned_cols=187  Identities=17%  Similarity=0.166  Sum_probs=135.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-------h--cC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-------I--VG   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-------~--~~   76 (319)
                      .|||||||+|.||++++++|+++|++|++++|+..+..           .....+.+|..+.+.....       +  ..
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------cccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999876321           1234445666654443322       2  24


Q ss_pred             cceEEEecccCCCC--CCC---CccchhhhhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCcccCCCCCC
Q 020924           77 CNGVFHIACPAPST--TVP---NPQMELLEPAVKGTLNVVKACLEA--KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWS  149 (319)
Q Consensus        77 ~d~vi~~a~~~~~~--~~~---~~~~~~~~~Nv~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  149 (319)
                      +|++|||||.....  ...   +.++.++++|+.++..+++++.++  .-.+||++||..+..+.++             
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------------  138 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS-------------  138 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-------------
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc-------------
Confidence            79999999964332  111   224567899999999999999865  2258999999877665432             


Q ss_pred             CccccccCCchHHhhHHHHHHHHHHhhhh-----CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCCcccc
Q 020924          150 DKEYCRTTNNWYCLSKTEAESEALEFGKK-----TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRM  224 (319)
Q Consensus       150 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (319)
                              ..+|+.||.+.+.+.+.++.+     .+++++.+.|+.+.++.           .+.....      .....
T Consensus       139 --------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------~~~~~~~------~~~~~  193 (235)
T d1ooea_         139 --------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------NRKWMPN------ADHSS  193 (235)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------HHHHSTT------CCGGG
T ss_pred             --------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-----------hhhhCcC------Ccccc
Confidence                    566999999999999988755     37789999999986542           1222211      13446


Q ss_pred             cccHHHHHHHHHHhhcc
Q 020924          225 IVDVRDVAEALLLAYEK  241 (319)
Q Consensus       225 ~i~v~D~a~~~~~~~~~  241 (319)
                      |+.++|+++.++.++..
T Consensus       194 ~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         194 WTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             CBCHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHhcC
Confidence            78999999998866644

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.82  E-value=8.2e-19  Score=147.01  Aligned_cols=220  Identities=14%  Similarity=0.091  Sum_probs=142.9

Q ss_pred             CCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      +++|++|||||+|  .||.+++++|+++|++|++++|+++.  ...++++........++..|+++.+++.++++     
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~--~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL--EKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT--HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            6899999999887  79999999999999999999998652  23444444445677888999999988887763     


Q ss_pred             --CcceEEEecccCCCCCCCCc----cchhhhhH----HHHHHHHHHHHHhC-CCC-EEEEeccccccccCCCCCCCccc
Q 020924           76 --GCNGVFHIACPAPSTTVPNP----QMELLEPA----VKGTLNVVKACLEA-KVK-RVIVVSSGVAVGLNPRWPKGQIM  143 (319)
Q Consensus        76 --~~d~vi~~a~~~~~~~~~~~----~~~~~~~N----v~~~~~l~~~~~~~-~~~-~iv~~SS~~~~~~~~~~~~~~~~  143 (319)
                        .+|++||+++.........+    ....+..+    ......+.....+. +.. .++..||.+...+.+        
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~--------  152 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA--------  152 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--------
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccc--------
Confidence              57999999997644211111    01112222    22333333333332 222 355555544332221        


Q ss_pred             CCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccccCC
Q 020924          144 DETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESLEN  220 (319)
Q Consensus       144 ~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (319)
                                   ....|+.+|.+.+.+++..+.+   +|++++.+.||.+.++....... ............      
T Consensus       153 -------------~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~------  212 (274)
T d2pd4a1         153 -------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINA------  212 (274)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHS------
T ss_pred             -------------cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-hHHHHHHHhhhh------
Confidence                         1466999999999998887665   48999999999998875432211 112222222221      


Q ss_pred             cccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          221 KLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       221 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      +...+..++|+|.++++++....  ..| .+.++|
T Consensus       213 p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         213 PLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hccCCcCHHHHHHHHHHHhChhhCCCcCceEEECC
Confidence            44567899999999999997643  245 456665

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.81  E-value=1.4e-18  Score=142.83  Aligned_cols=205  Identities=21%  Similarity=0.151  Sum_probs=145.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc------Ccce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV------GCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~   79 (319)
                      |++|||||++.||++++++|+++|++|++++|+.+.             .....+.+|+++......+..      ..+.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   68 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFA   68 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------ccceEeeccccchhhhHHHHHhhhccccccc
Confidence            799999999999999999999999999999998763             345778899998877766543      2355


Q ss_pred             EEEecccCCCCC--------CCCccchhhhhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCCCCCCCc
Q 020924           80 VFHIACPAPSTT--------VPNPQMELLEPAVKGTLNVVKACLEA----------KVKRVIVVSSGVAVGLNPRWPKGQ  141 (319)
Q Consensus        80 vi~~a~~~~~~~--------~~~~~~~~~~~Nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~~~~~~~~~~~~  141 (319)
                      ++++++......        ..+.++..+++|+.+...++..+...          +..+||++||..+..+.++     
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~-----  143 (241)
T d1uaya_          69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-----  143 (241)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT-----
T ss_pred             hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC-----
Confidence            555555332211        01223567899999988888877532          3358999999887765542     


Q ss_pred             ccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCcccc
Q 020924          142 IMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYESL  218 (319)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (319)
                                      ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++.....   ............+   
T Consensus       144 ----------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~---  201 (241)
T d1uaya_         144 ----------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVP---  201 (241)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCC---
T ss_pred             ----------------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh---hhhHHHHHHhcCC---
Confidence                            466999999999999888764   589999999999987643322   1222222222221   


Q ss_pred             CCcccccccHHHHHHHHHHhhccCCCCce-EEEec
Q 020924          219 ENKLRMIVDVRDVAEALLLAYEKAEAEGR-YICTA  252 (319)
Q Consensus       219 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~  252 (319)
                        ....+..++|+|.++++++...-..|. ..++|
T Consensus       202 --~~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDG  234 (241)
T d1uaya_         202 --FPPRLGRPEEYAALVLHILENPMLNGEVVRLDG  234 (241)
T ss_dssp             --SSCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             --CCCCCcCHHHHHHHHHHHHhCCCCCCCEEEECC
Confidence              124567899999999999985434554 45554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.80  E-value=6.9e-18  Score=142.06  Aligned_cols=217  Identities=13%  Similarity=0.066  Sum_probs=144.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhcc-CCCeEE-----------------EEccCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKA-SENLKL-----------------FKADLLD   66 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~-----------------~~~Dl~~   66 (319)
                      +-.++||||++.||++++++|+++|++|++.+|+..+......+++... +.....                 +.+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            3578999999999999999999999999998887654322222222211 223333                 4456888


Q ss_pred             hhhHHHHhc-------CcceEEEecccCCCCCCC----Ccc--------------chhhhhHHHHHHHHHHHHHhC----
Q 020924           67 YDSVKSAIV-------GCNGVFHIACPAPSTTVP----NPQ--------------MELLEPAVKGTLNVVKACLEA----  117 (319)
Q Consensus        67 ~~~~~~~~~-------~~d~vi~~a~~~~~~~~~----~~~--------------~~~~~~Nv~~~~~l~~~~~~~----  117 (319)
                      .++++++++       .+|++|||||........    +.+              ...+.+|+.++..+.+++.+.    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            888887653       589999999976443111    111              125788999999988876532    


Q ss_pred             ------CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEec
Q 020924          118 ------KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICP  188 (319)
Q Consensus       118 ------~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp  188 (319)
                            +..++|+++|.....+.++                     ...|+.+|.+.+.+.+.++.+   +|+++..|.|
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~---------------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P  220 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLG---------------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  220 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHhcCCCCcccccccccccCCccc---------------------eeeeccccccchhhhHHHHHHhCCcccccccccc
Confidence                  2347888888655443321                     466999999999998888764   4899999999


Q ss_pred             CcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          189 NLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       189 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      |.+-...     ..............+.     ...+..++|+|+++++++....  ..| .+.++|
T Consensus       221 G~t~~~~-----~~~~~~~~~~~~~~pl-----~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG  277 (284)
T d1e7wa_         221 GLSVLVD-----DMPPAVWEGHRSKVPL-----YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  277 (284)
T ss_dssp             SSBCCGG-----GSCHHHHHHHHTTCTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccccccc-----cCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence            9643221     1223344443333221     2457799999999999997543  245 455654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.76  E-value=2.1e-16  Score=131.54  Aligned_cols=215  Identities=15%  Similarity=0.113  Sum_probs=139.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCCh----hhHHHH-------h
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDY----DSVKSA-------I   74 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~----~~~~~~-------~   74 (319)
                      ++|||||++.||++++++|+++|++|++++|+.++......+++.. .......+..|+.+.    +.+.++       +
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999876543333333322 234667777776543    233332       2


Q ss_pred             cCcceEEEecccCCCCCCCC---------------ccchhhhhHHHHHHHHHHHHHhC---------CCCEEEEeccccc
Q 020924           75 VGCNGVFHIACPAPSTTVPN---------------PQMELLEPAVKGTLNVVKACLEA---------KVKRVIVVSSGVA  130 (319)
Q Consensus        75 ~~~d~vi~~a~~~~~~~~~~---------------~~~~~~~~Nv~~~~~l~~~~~~~---------~~~~iv~~SS~~~  130 (319)
                      ..+|++|||||........+               .+...+..|+.+...........         ....++.+||...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            35899999999764321100               01233455666666555555432         1235777777554


Q ss_pred             cccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHH
Q 020924          131 VGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVL  207 (319)
Q Consensus       131 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~  207 (319)
                      ..+.++                     ...|+.||.+.+.+.+.++.+   +|++++.|.||.+..+...     .....
T Consensus       163 ~~~~~~---------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~~~~  216 (266)
T d1mxha_         163 DLPLPG---------------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQETQ  216 (266)
T ss_dssp             GSCCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CHHHH
T ss_pred             cccCcc---------------------hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CHHHH
Confidence            433321                     566999999999998888764   5899999999998766422     23333


Q ss_pred             HHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          208 IKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ....+..+.     .|.+..++|+|.++++++....  ..| .+.++|
T Consensus       217 ~~~~~~~pl-----~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         217 EEYRRKVPL-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             HHHHTTCTT-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            333333221     2445789999999999997643  355 456655

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.75  E-value=2.3e-17  Score=139.69  Aligned_cols=225  Identities=12%  Similarity=0.077  Sum_probs=141.3

Q ss_pred             CCCCCCeEEEeCcch--HHHHHHHHHHHHCCCeEEEEEcCCChhhHHH-HHhhhcc---------CCCe-EEEEcc--C-
Q 020924            1 MALEKERVCVTGAGG--FLASWVVKLLLSRDYFVHGTAREPSDEKNAR-LYELEKA---------SENL-KLFKAD--L-   64 (319)
Q Consensus         1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~---------~~~~-~~~~~D--l-   64 (319)
                      |+|++|++|||||+|  .||++++++|+++|++|++.+|+........ .......         .... .....|  + 
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            778999999999887  8999999999999999999998654221111 1100000         0011 122222  1 


Q ss_pred             -----------------CChhhHHHH-------hcCcceEEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHH
Q 020924           65 -----------------LDYDSVKSA-------IVGCNGVFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKAC  114 (319)
Q Consensus        65 -----------------~~~~~~~~~-------~~~~d~vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~  114 (319)
                                       .+...++++       +..+|++|||||.....      ...+.+...+++|+.+...+++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                             122222222       34689999999864321      112235678899999999999998


Q ss_pred             HhCCC--CEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhh----hhCCceEEEEec
Q 020924          115 LEAKV--KRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFG----KKTGLDVVTICP  188 (319)
Q Consensus       115 ~~~~~--~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~lrp  188 (319)
                      .....  ++++.++|.+......                    .....|+.+|.+.+.+++.++    .++|++++.|.|
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~--------------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~P  223 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIP--------------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA  223 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCT--------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHhhcCCcceeeeehhhccccc--------------------ccccceecccccccccccccchhccccceEEeccccc
Confidence            76532  2566666644332211                    013459999998887766543    345899999999


Q ss_pred             CcccCCCCCCCCCccHHHHHHHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCce-EEEec
Q 020924          189 NLVLGPLLQSKVNTSSLVLIKLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEGR-YICTA  252 (319)
Q Consensus       189 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~  252 (319)
                      |.+.++..... .....+........      +...+..++|+|.++++++....  ..|. ..++|
T Consensus       224 G~i~T~~~~~~-~~~~~~~~~~~~~~------PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDG  283 (297)
T d1d7oa_         224 GPLGSRAAKAI-GFIDTMIEYSYNNA------PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             CCCBCCCSSCC-SHHHHHHHHHHHHS------SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ccccchhhhhc-cCCHHHHHHHHhCC------CCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            99988765432 22233333333333      34457899999999999996533  3554 45554

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.75  E-value=9.9e-18  Score=139.87  Aligned_cols=221  Identities=14%  Similarity=0.062  Sum_probs=140.1

Q ss_pred             CCCCeEEEeCcc--hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-----
Q 020924            3 LEKERVCVTGAG--GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-----   75 (319)
Q Consensus         3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (319)
                      |++|++|||||+  .+||.+++++|+++|++|++.+|+..+. ...+.+.  .......+.+|+++.+++.++++     
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~-~~~~~~~--~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL-IQRITDR--LPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHH-HHHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHH-HHHHHHH--cCCceeeEeeecccccccccccchhhhc
Confidence            678999999965  4699999999999999999999876542 2222222  24567888999999877766542     


Q ss_pred             -----CcceEEEecccCCCCC-CC--------CccchhhhhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCC
Q 020924           76 -----GCNGVFHIACPAPSTT-VP--------NPQMELLEPAVKGTLNVVKACLEAK-VKRVIVVSSGVAVGLNPRWPKG  140 (319)
Q Consensus        76 -----~~d~vi~~a~~~~~~~-~~--------~~~~~~~~~Nv~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~  140 (319)
                           .+|+++|+++...... ..        +.+...+.+|+.........+.... ...++.++|.......+.    
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~----  156 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA----  156 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT----
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcc----
Confidence                 3699999998653221 11        1112335566666666666665442 224455555343332221    


Q ss_pred             cccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCC-----CCC----ccHHHHH
Q 020924          141 QIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQS-----KVN----TSSLVLI  208 (319)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~-----~~~----~~~~~~~  208 (319)
                                       ...|+.+|.+.+.+++.++.+   +|+++..|.||.+.++....     ...    ....+..
T Consensus       157 -----------------~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  219 (268)
T d2h7ma1         157 -----------------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  219 (268)
T ss_dssp             -----------------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             -----------------cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHH
Confidence                             466999999999999988765   48999999999997653210     000    0001111


Q ss_pred             HHHhcCccccCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEec
Q 020924          209 KLLKEGYESLENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTA  252 (319)
Q Consensus       209 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  252 (319)
                      ......|     ..+.+..++|+|+++.+++....  ..| +..++|
T Consensus       220 ~~~~~~p-----l~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         220 GWDQRAP-----IGWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             HHHHHCT-----TCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HHHhcCC-----CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence            1111111     23557889999999999996432  245 345654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.72  E-value=8.3e-17  Score=137.93  Aligned_cols=169  Identities=13%  Similarity=0.099  Sum_probs=115.2

Q ss_pred             CCeEEEeC--cchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-----------cCCCeEEEEc---------
Q 020924            5 KERVCVTG--AGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-----------ASENLKLFKA---------   62 (319)
Q Consensus         5 ~~~vlItG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~---------   62 (319)
                      +|.+||||  ++..||.+++++|+++|.+|++..++........-.....           .........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57999999  5579999999999999999999887654321111000000           0011122223         


Q ss_pred             -----------cCCChhhHHHHh-------cCcceEEEecccCCCC------CCCCccchhhhhHHHHHHHHHHHHHhC-
Q 020924           63 -----------DLLDYDSVKSAI-------VGCNGVFHIACPAPST------TVPNPQMELLEPAVKGTLNVVKACLEA-  117 (319)
Q Consensus        63 -----------Dl~~~~~~~~~~-------~~~d~vi~~a~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~~~~~~-  117 (319)
                                 |+++.+.++.++       ..+|++||+||.....      ...+.+...+++|+.+...+++++.+. 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       444554455443       3689999999865421      112345678899999999999998876 


Q ss_pred             -CCCEEEEeccccccccCCCCCCCcccCCCCCCCccccccCCchHHhhHHHHHHHHHHhhh----hCCceEEEEecCccc
Q 020924          118 -KVKRVIVVSSGVAVGLNPRWPKGQIMDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGK----KTGLDVVTICPNLVL  192 (319)
Q Consensus       118 -~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~----~~~~~~~~lrp~~v~  192 (319)
                       .-++||++||.+...+.++                    +...|+.+|.+.+.+++.++.    ++|+++..|.||.+-
T Consensus       162 ~~~GsIv~iss~~~~~~~p~--------------------y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPG--------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTT--------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             ccccccccceeehhcccccc--------------------cchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence             2358999998765443321                    134599999999988887764    358999999999886


Q ss_pred             C
Q 020924          193 G  193 (319)
Q Consensus       193 G  193 (319)
                      +
T Consensus       222 T  222 (329)
T d1uh5a_         222 S  222 (329)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.70  E-value=6.1e-16  Score=127.99  Aligned_cols=217  Identities=18%  Similarity=0.173  Sum_probs=129.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh--------cC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI--------VG   76 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~   76 (319)
                      ||+||||||++.||++++++|+++|++|++++|+..+                  ...|+.+.+......        ..
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            6799999999999999999999999999999987652                  135777665554432        24


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCC-CCCCCcc---------
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLE----AKVKRVIVVSSGVAVGLNP-RWPKGQI---------  142 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~-~~~~~~~---------  142 (319)
                      +|+++|+|+....   .+.+.....+|..+...+.+....    ........+++........ ..+....         
T Consensus        63 id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i  139 (257)
T d1fjha_          63 MDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEE
Confidence            7999999986544   233456677888887777766543    3444666666543322110 0000000         


Q ss_pred             --cCCCCCCCccccccCCchHHhhHHHHHHHHHHhhhh---CCceEEEEecCcccCCCCCCCCCccHHHHHHHHhcCccc
Q 020924          143 --MDETCWSDKEYCRTTNNWYCLSKTEAESEALEFGKK---TGLDVVTICPNLVLGPLLQSKVNTSSLVLIKLLKEGYES  217 (319)
Q Consensus       143 --~~E~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (319)
                        ........     .....|+.||.+.+.+.+.++.+   +|++++.|.||.+-++........ ........+.    
T Consensus       140 ~s~~~~~~~~-----~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~----  209 (257)
T d1fjha_         140 RAIVEHAGEQ-----GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-PRYGESIAKF----  209 (257)
T ss_dssp             HHHHHTCCTT-----HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------C----
T ss_pred             eeehhccCCC-----cchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC-HHHHHHHHhc----
Confidence              00000000     01345999999999999988654   589999999999987753321100 0111111111    


Q ss_pred             cCCcccccccHHHHHHHHHHhhccCC--CCc-eEEEecc
Q 020924          218 LENKLRMIVDVRDVAEALLLAYEKAE--AEG-RYICTAH  253 (319)
Q Consensus       218 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  253 (319)
                       -.+...+..++|+|.++++++....  ..| ...++|.
T Consensus       210 -~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         210 -VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             -CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence             1145567899999999999997543  345 3455543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.50  E-value=5.6e-15  Score=116.29  Aligned_cols=84  Identities=15%  Similarity=0.121  Sum_probs=68.9

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+.++... ..+.+. ...++....+|++|.+++++++.++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA-AADSVN-KRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHH-HHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHH-HHHHHH-hccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            5789999999999999999999999999999999999764322 112221 12355678899999999999999999999


Q ss_pred             EecccC
Q 020924           82 HIACPA   87 (319)
Q Consensus        82 ~~a~~~   87 (319)
                      |+||..
T Consensus        98 n~Ag~g  103 (191)
T d1luaa1          98 TAGAIG  103 (191)
T ss_dssp             ECCCTT
T ss_pred             ecCccc
Confidence            999864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.57  E-value=2.4e-07  Score=67.92  Aligned_cols=114  Identities=17%  Similarity=0.149  Sum_probs=78.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      ||.|+||+|.+|++++-.|..+|  -++..++.++.  +...++ +........ .. ......+..+.++++|+||..|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~--~~~a~D-l~~~~~~~~-~~-~~~~~~~~~~~~~~aDivVita   76 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAAD-LSHIETRAT-VK-GYLGPEQLPDCLKGCDVVVIPA   76 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHH-HTTSSSSCE-EE-EEESGGGHHHHHTTCSEEEECC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc--chhhHH-HhhhhhhcC-CC-eEEcCCChHHHhCCCCEEEECC
Confidence            79999999999999999998887  46888887653  333322 221111111 11 1123456778889999999999


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |...... .+. ...++.|+...+.+++.+.+++.+.+|.+-|
T Consensus        77 g~~~~~g-~sR-~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          77 GVPRKPG-MTR-DDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             SCCCCTT-CCG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CcCCCCC-CCc-chHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            8643322 233 6789999999999999999997665554444

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.55  E-value=1.4e-07  Score=68.39  Aligned_cols=95  Identities=9%  Similarity=0.041  Sum_probs=69.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++++++.  ...+.+.    .+..++.+|.+|++.++++ ++++|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~--~~~~~~~----~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI--CKKASAE----IDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhh--hhhhhhh----hhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            68999998 999999999999999999999987653  2223221    2568899999999999987 56788888753


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEE
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV  124 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~  124 (319)
                      .        ++     +.|+.    ++..+++.+.+++|-
T Consensus        74 ~--------~d-----~~N~~----~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          74 G--------KE-----EVNLM----SSLLAKSYGINKTIA   96 (132)
T ss_dssp             S--------CH-----HHHHH----HHHHHHHTTCCCEEE
T ss_pred             C--------cH-----HHHHH----HHHHHHHcCCceEEE
Confidence            1        11     34543    333556677776664

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.48  E-value=7.6e-07  Score=65.32  Aligned_cols=114  Identities=11%  Similarity=0.145  Sum_probs=75.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHH--hhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLY--ELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      ++|||.|+|+ |++|+.++..|+.+|  .+|.++++++.......++  .............+|.   +    .++++|+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~adi   75 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDADL   75 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----HhccccE
Confidence            3579999996 999999999999877  6899999876543333322  1111223344445543   2    3578999


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      ||.+||...... ... ...+..|+.....+.+.+.+++.+.++.+-|
T Consensus        76 vvitag~~~~~g-~~r-~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKPG-ESR-LDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCCC-CCH-HHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            999998654322 222 6788999999999999999997765555544

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.43  E-value=2.9e-06  Score=61.98  Aligned_cols=114  Identities=18%  Similarity=0.125  Sum_probs=76.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhH----HHHHhhhc-cCCCeEEEEccCCChhhHHHHhcCcc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKN----ARLYELEK-ASENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      |||.|+||+|.+|+.++-.|+.+|  .++..+++++...+.    .-+..... .....+....--.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            579999999999999999999888  589998887543221    11222111 122333322211122    3567899


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEe
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV  125 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~  125 (319)
                      +||-+||...... .+. .+.++.|....+.+.+...+++.+.++.+
T Consensus        77 vVVitAG~~~~~g-~sR-~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEG-MSR-MDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             EEEEecccccCCC-CCh-hhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            9999998643322 223 67899999999999999998876666554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.33  E-value=8.8e-07  Score=67.55  Aligned_cols=74  Identities=15%  Similarity=0.208  Sum_probs=57.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      .|+|+|.|| |++|+++++.|.++||+|++++|+....  ..+.+   ..........+..+.......+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a--~~l~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESA--KKLSA---GVQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHH--HHHHT---TCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHH--HHHHh---cccccccccccccchhhhHhhhhccceeEeec
Confidence            589999988 9999999999999999999999987743  22222   12345555667777778888888888888654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.28  E-value=1.3e-05  Score=58.43  Aligned_cols=115  Identities=17%  Similarity=0.134  Sum_probs=74.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHH-HC--CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLL-SR--DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~-~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |||.|+|++|.+|++++-.|. +.  +.++..++..+. .....+ .+.+..........  ....+. +.+++.|+||-
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~-Dl~h~~~~~~~~~~--~~~~~~-~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAV-DLSHIPTAVKIKGF--SGEDAT-PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHH-HHHTSCSSCEEEEE--CSSCCH-HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHH-HHHCCccccCCcEE--EcCCCc-cccCCCCEEEE
Confidence            589999999999999998875 43  478888887543 222222 23222111211111  112222 35789999999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCE-EEEecc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR-VIVVSS  127 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~-iv~~SS  127 (319)
                      +||...... .+. .+.++.|....+.+.+.+.+++.+. +|.+|.
T Consensus        76 taG~~~k~g-~~R-~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          76 SAGVRRKPG-MDR-SDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             CCSCCCCTT-CCG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCccCCCC-cch-hhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            999654322 233 6889999999999999999986554 555544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.27  E-value=6.8e-06  Score=60.30  Aligned_cols=113  Identities=14%  Similarity=0.170  Sum_probs=77.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHH--hhhcc-CCCeEEEEccCCChhhHHHHhcCcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLY--ELEKA-SENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      .++||.|+|+ |.+|+.++..|+.+|  -++..++++++......++  ..... ....+....|.       +.++++|
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD   76 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD   76 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence            4578999997 999999999999877  4799998876544333322  21111 12334433433       3467899


Q ss_pred             eEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEec
Q 020924           79 GVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVS  126 (319)
Q Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~S  126 (319)
                      +||..++...... ... .+.+..|+...+.+.+.+.+++.+ .+|.+|
T Consensus        77 vvvitag~~~~~~-~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          77 LVVICAGANQKPG-ETR-LDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             EEEECCSCCCCTT-TCS-GGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eEEEecccccccC-cch-hHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            9999998654322 232 678899999999999999988654 444443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.26  E-value=2.1e-06  Score=63.53  Aligned_cols=119  Identities=16%  Similarity=0.062  Sum_probs=78.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhh--hcc-CCCeEEEEccCCChhhHHHHhcCcc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYEL--EKA-SENLKLFKADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~--~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (319)
                      .+++||.|+|+ |.+|+.++..|...+ .++.+++.++........+-.  ... .......     .....++.++++|
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-----~~~~~~~~~~~ad   78 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-----AEYSYEAALTGAD   78 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-----EECSHHHHHTTCS
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-----ccCchhhhhcCCC
Confidence            45689999998 999999998888777 488888887765433332211  111 1111111     1123456788999


Q ss_pred             eEEEecccCCCCCC-C--CccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           79 GVFHIACPAPSTTV-P--NPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        79 ~vi~~a~~~~~~~~-~--~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +||-.++....... .  ..-...+..|+.....+++.+.+++.+-+|.+-|
T Consensus        79 iVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          79 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             eEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999986543221 0  1125678899999999999999988765555444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.17  E-value=1.9e-06  Score=62.42  Aligned_cols=71  Identities=17%  Similarity=0.063  Sum_probs=56.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      |+++|+|+ |-+|+++++.|.++|++|++++.+++..  ..   +.  ......+.+|.++++.++++ +.++|.+|-..
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~--~~---~~--~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV--NA---YA--SYATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH--HH---TT--TTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHH--HH---HH--HhCCcceeeecccchhhhccCCccccEEEEEc
Confidence            57899987 9999999999999999999999876532  22   21  23557788999999999887 67888887654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.13  E-value=2.1e-05  Score=56.92  Aligned_cols=109  Identities=14%  Similarity=0.061  Sum_probs=73.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChh--hHHHH--HhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDE--KNARL--YELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ||.|+||+|.+|+.++-.|+.+|  -++..++++....  ....+  ........+.+....|   .+    .++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HH----HhhhcCEE
Confidence            79999999999999999999887  3688877543322  12222  2111123344444443   33    25689999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEE
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV  124 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~  124 (319)
                      |-.||...... .+. .+.++.|....+.+.+...+++.+.++.
T Consensus        75 vitaG~~~~~g-~~R-~dl~~~N~~I~~~i~~~i~~~~p~~i~i  116 (142)
T d1o6za1          75 VITAGIPRQPG-QTR-IDLAGDNAPIMEDIQSSLDEHNDDYISL  116 (142)
T ss_dssp             EECCCCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHTTCSCCEEE
T ss_pred             EEecccccccC-Cch-hhHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence            99998643322 233 6789999999999999999987654443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=1e-05  Score=54.31  Aligned_cols=91  Identities=14%  Similarity=0.217  Sum_probs=62.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +.++|+|+|.|. |-.|..+++.|.++|++|++.+.+........   +   .....++.+.. +    ...+.++|.||
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~---~---~~~~~~~~~~~-~----~~~~~~~d~vi   69 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDK---L---PEAVERHTGSL-N----DEWLMAADLIV   69 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGG---S---CTTSCEEESBC-C----HHHHHHCSEEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHH---H---hhccceeeccc-c----hhhhccCCEEE
Confidence            468899999999 88999999999999999999998765332211   1   12344444443 1    22356789999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEE
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVI  123 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv  123 (319)
                      -.-|...    .++              +++.|++.++ ++|
T Consensus        70 ~SPGi~~----~~~--------------~~~~a~~~gi-~ii   92 (93)
T d2jfga1          70 ASPGIAL----AHP--------------SLSAAADAGI-EIV   92 (93)
T ss_dssp             ECTTSCT----TSH--------------HHHHHHHTTC-EEE
T ss_pred             ECCCCCC----CCH--------------HHHHHHHcCC-CeE
Confidence            9776532    233              7778888887 443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.06  E-value=2.4e-06  Score=63.31  Aligned_cols=42  Identities=17%  Similarity=0.233  Sum_probs=38.3

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChh
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDE   42 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (319)
                      |+..+++|.|+||.|.+|+.+++.|.++||+|.+.+|+....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            677889999999999999999999999999999999987643

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.06  E-value=1.9e-05  Score=57.19  Aligned_cols=112  Identities=13%  Similarity=0.169  Sum_probs=76.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |||.|+|+ |.+|+.++-.|+.++  .++..+++++.......++-...  ...+......|   .+    .++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~----~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YA----DLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GG----GGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HH----HhcCCCEEE
Confidence            58999997 999999999888776  58998888765444333332221  12233433332   22    367899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      -+||...... ... .+.+..|......+.+.+.+.+.+.++.+-|
T Consensus        73 itag~~~~~g-~~r-~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          73 VAAGVPQKPG-ETR-LQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             ECCCCCCCSS-CCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecccccCCC-cch-hhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9998654322 222 5778899999999999999987665555433

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.05  E-value=4.2e-05  Score=55.57  Aligned_cols=111  Identities=15%  Similarity=0.063  Sum_probs=75.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |||.|+|| |.+|+.++..|+..|  .++.++++++.......++-...   .....++...  .+.+    .++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----HhcCCeEE
Confidence            57999997 999999999999887  68999998887544333322111   1223333322  2222    46789999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEe
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV  125 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~  125 (319)
                      |-+||...... ... ....+.|......+.+.+.+++.+-++.+
T Consensus        74 vitag~~~~~g-~~r-~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          74 IITAGLPRKPG-MTR-EDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             EECCSCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             EEEEecCCCCC-Cch-HHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            99998644322 222 67889999999999999998876544444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.03  E-value=2.8e-05  Score=56.45  Aligned_cols=110  Identities=16%  Similarity=0.181  Sum_probs=70.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +||.|+|+ |.+|+.++-.|+.++  .++.+++++.+......++-...  .........+   +.    +.++++|+||
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCCCceEE
Confidence            57999997 999999999999887  48999998876544444332211  1122332222   22    3467899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEe
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV  125 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~  125 (319)
                      -.||...... ... ...+..|+.....+++.+.+++.+.++.+
T Consensus        74 itag~~~~~~-~~r-~~l~~~N~~i~~~i~~~i~~~~p~ai~iv  115 (142)
T d1y6ja1          74 VTAGANRKPG-ETR-LDLAKKNVMIAKEVTQNIMKYYNHGVILV  115 (142)
T ss_dssp             ECCCC-------CH-HHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             EecccccCcC-cch-hHHhhHHHHHHHHHHHHhhccCCCceEEE
Confidence            9998654322 233 67889999999999999999876544443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.01  E-value=2.4e-05  Score=57.76  Aligned_cols=117  Identities=20%  Similarity=0.152  Sum_probs=71.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC----e---EEEEEcCCChhhHHH-HHhhhcc-CCCeEEEEccCCChhhHHHHhc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY----F---VHGTAREPSDEKNAR-LYELEKA-SENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~----~---V~~~~r~~~~~~~~~-~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      .+||.|+||+|++|++++-.|+..+.    .   ...+.-......... ...+... ......+...    ....+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhcc
Confidence            46999999999999999999987542    1   122221111111111 1111111 1223333322    23457788


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CC-EEEEecc
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAK-VK-RVIVVSS  127 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~-~~-~iv~~SS  127 (319)
                      ++|+||-.+|...... .+ ..+.+..|+...+.+.+.+.++. .. .++.+|.
T Consensus        80 ~advViitaG~~~~pg-~~-r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          80 DADYALLVGAAPRKAG-ME-RRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             TCSEEEECCCCCCCTT-CC-HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cccEEEeecCcCCCCC-Cc-HHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence            9999999998754322 22 36788999999999999999863 22 4555553

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.01  E-value=6.6e-05  Score=55.36  Aligned_cols=114  Identities=13%  Similarity=0.082  Sum_probs=77.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCChhhHHHHHhhh--cc-CCCeEEEEccCCChhhHHHHhcCc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPSDEKNARLYELE--KA-SENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      .+.+||.|+|+ |.+|+.++-.|+.+|.  ++..++++++......++-..  .. +........|   .+    .++++
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~----~~~~a   89 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YS----VTANS   89 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GG----GGTTC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hh----hcccc
Confidence            34579999997 9999999999999884  788888876544333332211  11 1122222222   22    36789


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCE-EEEec
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR-VIVVS  126 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~-iv~~S  126 (319)
                      |+||..||...... .+. ...++.|+...+.+...+.+.+.+- +|.+|
T Consensus        90 diVVitAg~~~~~g-~tR-~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          90 KIVVVTAGVRQQEG-ESR-LNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             SEEEECCSCCCCTT-CCG-GGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cEEEEecCCccccC-cch-HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999999754332 233 6788999999999999999987654 44444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.99  E-value=2.7e-06  Score=65.80  Aligned_cols=36  Identities=19%  Similarity=0.132  Sum_probs=33.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |||.|+||+|.+|+++++.|++.||+|.+.+|++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            579999999999999999999999999999998764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.98  E-value=6.7e-06  Score=59.99  Aligned_cols=95  Identities=12%  Similarity=0.028  Sum_probs=56.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC----CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD----YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ||+|.|.||||++|+.+++.|+++.    .+++.+.++..........     ....  ...++.+.+    .++++|++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-----~~~~--~~~~~~~~~----~~~~~Div   69 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-----GTTG--TLQDAFDLE----ALKALDII   69 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-----TCCC--BCEETTCHH----HHHTCSEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-----CCce--eeecccchh----hhhcCcEE
Confidence            5689999999999999999888753    4566666554432110000     0111  112233322    35789999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSG  128 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~  128 (319)
                      |.+++.       +   .        +..+...+.+.|++ .+|=.||.
T Consensus        70 F~a~~~-------~---~--------s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          70 VTCQGG-------D---Y--------TNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             EECSCH-------H---H--------HHHHHHHHHHTTCCCEEEECSST
T ss_pred             EEecCc-------h---H--------HHHhhHHHHhcCCCeecccCCcc
Confidence            998732       1   1        34567777778874 45555553

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=4.5e-05  Score=57.97  Aligned_cols=83  Identities=10%  Similarity=0.008  Sum_probs=61.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhh-HHH-HHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEK-NAR-LYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      .++++|+|.|+ |..|++++..|.+.|. ++++++|+++... ... .+.+.. .........|+.+.+.+...+.++|.
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-NTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-hcCcceEeeecccccchhhhhcccce
Confidence            56799999988 8899999999999885 7899999876432 111 122211 12334556789999999999999999


Q ss_pred             EEEecccC
Q 020924           80 VFHIACPA   87 (319)
Q Consensus        80 vi~~a~~~   87 (319)
                      |||+....
T Consensus        94 iIN~Tp~G  101 (182)
T d1vi2a1          94 LTNGTKVG  101 (182)
T ss_dssp             EEECSSTT
T ss_pred             eccccCCc
Confidence            99997643

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.92  E-value=0.00013  Score=54.67  Aligned_cols=115  Identities=17%  Similarity=0.100  Sum_probs=72.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-----C--eEEEEEcCCChhhHHHH-Hhhhcc-CCCeEEEEccCCChhhHHHHhcC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-----Y--FVHGTAREPSDEKNARL-YELEKA-SENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      .+|.||||+|.||++++-.|++.+     .  .++.++.........-+ .++... .+....+..    .....+.+++
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~~~  100 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYEVFED  100 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchhhccC
Confidence            479999999999999999998742     1  44555544332211111 112221 122222221    1235677899


Q ss_pred             cceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC--CEEEEec
Q 020924           77 CNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV--KRVIVVS  126 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~iv~~S  126 (319)
                      +|+||-.+|.....  .....+.+..|......+.+++.++..  -+++.+|
T Consensus       101 aDvVvi~ag~~rkp--g~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         101 VDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEeeccCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999865432  222378899999999999999998633  2555654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.90  E-value=5.6e-05  Score=55.00  Aligned_cols=114  Identities=13%  Similarity=0.073  Sum_probs=73.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhh--cc-CCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELE--KA-SENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |||.|+|+ |.+|+.++-.|+.+|  .++..+++++.......++-..  .. .........|   .+    .++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~----~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WA----ALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GG----GGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HH----HhccccEE
Confidence            68999996 999999999999877  5888888776543333322111  11 1223333333   32    35789999


Q ss_pred             EEecccCCCCC--CCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           81 FHIACPAPSTT--VPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~--~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |-.||......  ....-...++.|+.....+.+.+.+++.+.++.+-|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            99998543211  011125678899999999999999987655544433

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.90  E-value=8.6e-05  Score=54.22  Aligned_cols=116  Identities=16%  Similarity=0.135  Sum_probs=75.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      +.||.|+|+ |.+|+.++..|..++ .++.++++++.......++-...   ..........+  +.    +.++++|+|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence            468999996 999999998777776 57888888776554443332211   11122222221  22    345789999


Q ss_pred             EEecccCCCCCCC---CccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           81 FHIACPAPSTTVP---NPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~---~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |-+++........   ..-...+..|....+.+.+.+.+.+.+.++.+-|
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            9999965432111   1126678999999999999999987665544433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.90  E-value=1.6e-05  Score=59.05  Aligned_cols=73  Identities=21%  Similarity=0.203  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      ++++++|||+|+ |-+|+.+++.|..+|. ++++..|+..+.  ..+....    +.+     ..+.+++.+.+.++|+|
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka--~~l~~~~----~~~-----~~~~~~~~~~l~~~Div   88 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA--VELARDL----GGE-----AVRFDELVDHLARSDVV   88 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH--HHHHHHH----TCE-----ECCGGGHHHHHHTCSEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHH--HHHHHhh----hcc-----cccchhHHHHhccCCEE
Confidence            357899999998 9999999999999997 688988875532  2222211    122     23456788889999999


Q ss_pred             EEeccc
Q 020924           81 FHIACP   86 (319)
Q Consensus        81 i~~a~~   86 (319)
                      |.+.+.
T Consensus        89 i~atss   94 (159)
T d1gpja2          89 VSATAA   94 (159)
T ss_dssp             EECCSS
T ss_pred             EEecCC
Confidence            999764

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.86  E-value=7.6e-05  Score=55.01  Aligned_cols=114  Identities=17%  Similarity=0.154  Sum_probs=75.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHhhh--cc-CCCeEEEEccCCChhhHHHHhcCc
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYELE--KA-SENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |+..||.|+|+ |.+|+.++-.|+.+|  .++.+++++.+......++-..  .. +........|   .+    .++++
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~----~~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YN----VSANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GG----GGTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hh----hhccc
Confidence            45568999996 999999999999887  4799888776543333332211  11 1122222223   22    34688


Q ss_pred             ceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCE-EEEec
Q 020924           78 NGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKR-VIVVS  126 (319)
Q Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~-iv~~S  126 (319)
                      |+||-.||...... .+. .+.++.|+.....+...+.+++.+- ++.+|
T Consensus        89 divvitag~~~~~~-~~R-~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          89 KLVIITAGARMVSG-QTR-LDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEEEECCSCCCCTT-TCS-SCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             cEEEEecccccCCC-CCH-HHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            99999988654432 233 5778999999999999998886654 44443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.85  E-value=1.9e-05  Score=59.54  Aligned_cols=74  Identities=23%  Similarity=0.167  Sum_probs=51.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++.+|||+||+|.+|+..++.+...|.+|++++++++  +....+++     +...+ .|..+.........++|+|+++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~--~~~~~~~l-----Ga~~~-i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPE--KLALPLAL-----GAEEA-ATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGG--GSHHHHHT-----TCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccc--cccccccc-----cccee-eehhhhhhhhhccccccccccc
Confidence            4678999999999999999988889999999998765  33333333     22222 2443333223334579999997


Q ss_pred             cc
Q 020924           84 AC   85 (319)
Q Consensus        84 a~   85 (319)
                      +|
T Consensus        99 ~G  100 (171)
T d1iz0a2          99 RG  100 (171)
T ss_dssp             SC
T ss_pred             cc
Confidence            65

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.83  E-value=3.8e-05  Score=56.66  Aligned_cols=116  Identities=22%  Similarity=0.098  Sum_probs=71.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-------eEEEEEcCCChhhHHHHHh-hhc-cCCCeEEEEccCCChhhHHHHhc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-------FVHGTAREPSDEKNARLYE-LEK-ASENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      -+||.|+||+|.+|++++-.|++.+.       ++..++.+........+.- ... .......+..    .....+.++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~   78 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAFK   78 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----CcccccccC
Confidence            46899999999999999999986431       3444444433322222211 111 1122222222    123456788


Q ss_pred             CcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC-CCC-EEEEec
Q 020924           76 GCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA-KVK-RVIVVS  126 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~-~~~-~iv~~S  126 (319)
                      ++|+||-.+|....... . ..+.++.|..-.+.+.+...++ +-. .+|.+|
T Consensus        79 ~~dvVVitag~~~~~g~-s-r~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          79 DLDVAILVGSMPRRDGM-E-RKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TCSEEEECCSCCCCTTC-C-TTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEEecccCCCCCC-c-hhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            99999999986554322 2 2567899999999999999876 433 345554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.82  E-value=0.00012  Score=52.95  Aligned_cols=113  Identities=12%  Similarity=0.124  Sum_probs=71.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +||.|+|+ |.+|+.++-.|+.++ .++.+++.+++......++-...   .+....+...  .|.+    .+.+.|+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~~advvv   74 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTANSDVIV   74 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----HhcCCCEEE
Confidence            68999997 999999999998776 48888888776543333322111   0112222211  1222    246789999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      -+||...... ... ...+..|+.....+.+...+++.+-++.+-|
T Consensus        75 itag~~~~~~-~~r-~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          75 VTSGAPRKPG-MSR-EDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             ECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EeeeccCCcC-cch-hHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            9998654321 222 5778899999999999999987665555444

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.81  E-value=3.6e-05  Score=58.51  Aligned_cols=77  Identities=19%  Similarity=0.143  Sum_probs=50.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      ++.+|||+||+|.+|+..++.....|.+|++++++++  +...++..   +....+..-|-...+.+.+...  ++|+|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~--~~~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE--KIAYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHH--HHHHHHhh---hhhhhcccccccHHHHHHHHhhcCCCceeE
Confidence            4689999999999999999888889999999998754  33344433   1111121122222233333333  589999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      ++.|
T Consensus       104 D~vG  107 (182)
T d1v3va2         104 DNVG  107 (182)
T ss_dssp             ESSC
T ss_pred             EecC
Confidence            9986

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=5.3e-05  Score=59.36  Aligned_cols=76  Identities=13%  Similarity=0.024  Sum_probs=56.0

Q ss_pred             CCCCCeEEEeCc----------------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC
Q 020924            2 ALEKERVCVTGA----------------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL   65 (319)
Q Consensus         2 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   65 (319)
                      ++++++||||+|                ||-.|.+|++++..+|++|+++.-.....          .+..+..+..  .
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------~p~~~~~~~~--~   70 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------TPPFVKRVDV--M   70 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------CCTTEEEEEC--C
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------ccccccccee--h
Confidence            478999999974                69999999999999999999988654421          1235565544  3


Q ss_pred             ChhhHH----HHhcCcceEEEecccCCC
Q 020924           66 DYDSVK----SAIVGCNGVFHIACPAPS   89 (319)
Q Consensus        66 ~~~~~~----~~~~~~d~vi~~a~~~~~   89 (319)
                      ..+++.    ..+.+.|++|++|++...
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             hhHHHHHHHHhhhccceeEeeeechhhh
Confidence            434443    344688999999998764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.78  E-value=0.00018  Score=52.04  Aligned_cols=111  Identities=13%  Similarity=0.066  Sum_probs=74.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHH--HhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARL--YELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .||.|+|+ |.+|++++-.|+.+|  .++.++++++.......+  ...............  .+.+    .++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~----~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHH----HhhCCcEEE
Confidence            47999997 999999999999887  479988887654333332  222122223333222  1222    366889999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEe
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVV  125 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~  125 (319)
                      -.||...... ... .+.+..|....+.+...+.+++.+.++.+
T Consensus        75 itaG~~~~~g-~~R-~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          75 ITAGPRQKPG-QSR-LELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             ECCCCCCCTT-CCH-HHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EecccccCCC-Cch-hhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            9998654322 233 67889999999999999999876544443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.76  E-value=3.8e-05  Score=55.66  Aligned_cols=113  Identities=14%  Similarity=0.057  Sum_probs=74.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCChhhHHHHHh--hhc-cCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPSDEKNARLYE--LEK-ASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~--~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      |||.|+|+ |.+|+.++-.|+.+|  .++.+++++++......++-  ... .....+....  .|.+    .++++|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~----~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH----HhccccEE
Confidence            58999997 999999999998777  57888888765443333221  111 1122233221  1222    56789999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      |-.|+...... .. ....+..|......+.+.+.+++.+.++.+-|
T Consensus        74 vitag~~~~~g-~~-r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          74 VVTAGLARKPG-MT-RLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EECCCCCCCSS-CC-HHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEeccccCCCC-Cc-hHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            99888543322 22 36788999999999999999987655555444

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2e-05  Score=50.35  Aligned_cols=38  Identities=32%  Similarity=0.344  Sum_probs=34.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      ++++|||+||+|.+|+..++.+...|++|+++.+++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            45789999999999999999888899999999988763

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=0.00011  Score=54.03  Aligned_cols=75  Identities=23%  Similarity=0.281  Sum_probs=58.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      -.|+|+|. |-+|+.+++.|.++|++|+++..+++... ...+...  ..++.++.+|.+|++.++.+ +++++.||-+.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~-~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI-KQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHH-HHHHHhh--cCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            36999988 89999999999999999999987765321 2222221  35789999999999998776 46788888764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=4.4e-05  Score=57.53  Aligned_cols=74  Identities=14%  Similarity=0.119  Sum_probs=50.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHH---Hhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKS---AIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~--~~d   78 (319)
                      ++.+|||+||+|.+|...++.+...|.+|++++++++  +....+++     +...+ .|.++.+..+.   ...  ++|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~--~~~~~~~~-----Ga~~v-i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE--GQKIVLQN-----GAHEV-FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHT-----TCSEE-EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccc--cccccccc-----Ccccc-cccccccHHHHhhhhhccCCce
Confidence            4678999999999999999988889999999997643  33333333     22222 35555433333   322  489


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      +++++++
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9999875

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.70  E-value=0.00013  Score=50.67  Aligned_cols=96  Identities=15%  Similarity=0.086  Sum_probs=65.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++++++|||.|+ |-+|..-++.|++.|.+|++++....+.......     ..+++++..+..+.     .+.+++.|+
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~-----dl~~~~lv~   77 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-----EGMLTLVEGPFDET-----LLDSCWLAI   77 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-----TTSCEEEESSCCGG-----GGTTCSEEE
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-----cCCceeeccCCCHH-----HhCCCcEEe
Confidence            578899999998 9999999999999999999998766643222221     24677777666432     245667777


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .+.+        ++ .    .    ...+.+.|++.++  +|++..
T Consensus        78 ~at~--------d~-~----~----n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          78 AATD--------DD-T----V----NQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             ECCS--------CH-H----H----HHHHHHHHHHTTC--EEEETT
T ss_pred             ecCC--------CH-H----H----HHHHHHHHHHcCC--EEEeCC
Confidence            5431        11 0    1    2357778887774  677654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.70  E-value=3.1e-05  Score=58.87  Aligned_cols=76  Identities=11%  Similarity=-0.004  Sum_probs=51.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhh---ccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELE---KASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |+|.|+|+ |.+|..++..|.++||+|++.+|++..  ...+....   ...+..+..........++.++++++|+||-
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQR--IKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            79999999 999999999999999999999997553  22222211   0111222222222222356788899999998


Q ss_pred             ec
Q 020924           83 IA   84 (319)
Q Consensus        83 ~a   84 (319)
                      +.
T Consensus        79 ~v   80 (184)
T d1bg6a2          79 VV   80 (184)
T ss_dssp             CS
T ss_pred             EE
Confidence            75

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=0.00012  Score=50.46  Aligned_cols=69  Identities=16%  Similarity=0.087  Sum_probs=54.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      .+.+|.|.|| |.+|+-++....+.|++|++++.+++.... .        -.-+++.+|..|.+.+.+...  ++|+|.
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~-~--------va~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-H--------VAHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-G--------GSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh-h--------cCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            3568999997 999999999999999999999987664311 1        122678899999999988775  568885


Q ss_pred             E
Q 020924           82 H   82 (319)
Q Consensus        82 ~   82 (319)
                      .
T Consensus        80 ~   80 (111)
T d1kjqa2          80 P   80 (111)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.58  E-value=7.4e-05  Score=56.26  Aligned_cols=74  Identities=22%  Similarity=0.193  Sum_probs=47.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh-hhHHHHh--cCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY-DSVKSAI--VGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~--~~~d~vi   81 (319)
                      +.+|||+||+|.+|+..++-....|.+|+++.+++++  .....++     +...+ .|-.+. +......  +++|+|+
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k--~~~~~~l-----Ga~~v-i~~~~~~~~~~~~~~~~gvD~vi  103 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE--HDYLRVL-----GAKEV-LAREDVMAERIRPLDKQRWAAAV  103 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC--HHHHHHT-----TCSEE-EECC---------CCSCCEEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH--HHHHHhc-----cccee-eecchhHHHHHHHhhccCcCEEE
Confidence            5789999999999999998888899999999988774  3344433     12221 132221 1111122  2589999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      ++.|.
T Consensus       104 d~vgg  108 (176)
T d1xa0a2         104 DPVGG  108 (176)
T ss_dssp             ECSTT
T ss_pred             EcCCc
Confidence            98763

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.55  E-value=4e-05  Score=59.34  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=30.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|.|.|. |++|..++..|+++|++|++++.+..
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~   34 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSST   34 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHH
Confidence            57999966 99999999999999999999997644

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.54  E-value=1.8e-05  Score=60.58  Aligned_cols=78  Identities=14%  Similarity=0.122  Sum_probs=51.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc---cCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK---ASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      |.|+||.|.|| |--|.+++..|.++|++|++.+|+++..  ..+.....   ..++++. .-++.-..+++++++++|.
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~--~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~   80 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEV--RLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEI   80 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHH--HHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSC
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHH--HHHhhccccccccccccc-ccccccchhhhhccCCCCE
Confidence            34578999988 9999999999999999999999875532  22222110   1122221 1122223467888999999


Q ss_pred             EEEec
Q 020924           80 VFHIA   84 (319)
Q Consensus        80 vi~~a   84 (319)
                      ||-+.
T Consensus        81 iiiav   85 (189)
T d1n1ea2          81 ILFVI   85 (189)
T ss_dssp             EEECS
T ss_pred             EEEcC
Confidence            98864

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=7.4e-05  Score=56.50  Aligned_cols=75  Identities=11%  Similarity=0.008  Sum_probs=51.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhh---HHHHhc--Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDS---VKSAIV--GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d   78 (319)
                      .+.+|+|+||+|.+|..+++.....|.+|+++++++++  .+.++++     +...+ .|.++.+-   +.++-.  ++|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k--~~~~~~l-----Ga~~v-i~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK--AQSALKA-----GAWQV-INYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH--HHHHHHH-----TCSEE-EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHH--HHHHHhc-----CCeEE-EECCCCCHHHHHHHHhCCCCeE
Confidence            36799999999999999999888899999999988663  3344443     22222 35555433   333322  479


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      +|+++++.
T Consensus       100 ~v~d~~g~  107 (179)
T d1qora2         100 VVYDSVGR  107 (179)
T ss_dssp             EEEECSCG
T ss_pred             EEEeCccH
Confidence            99998753

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.53  E-value=6.3e-05  Score=54.66  Aligned_cols=94  Identities=22%  Similarity=0.150  Sum_probs=53.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC---CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD---YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .++|.|.||||++|+.+++.|.+++   .++..+..+....            ..+.+..-|+.-...-...+.++|+++
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G------------k~i~~~~~~~~~~~~~~~~~~~~d~vf   69 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG------------QRMGFAESSLRVGDVDSFDFSSVGLAF   69 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT------------CEEEETTEEEECEEGGGCCGGGCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC------------cceeeccccchhccchhhhhccceEEE
Confidence            3689999999999999999997654   4666655433321            111111111111111112245788888


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSGV  129 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~~  129 (319)
                      .+++..                  .+..+...+.+.++ ++|-.||..
T Consensus        70 ~a~p~~------------------~s~~~~~~~~~~g~-~VID~Ss~f   98 (144)
T d2hjsa1          70 FAAAAE------------------VSRAHAERARAAGC-SVIDLSGAL   98 (144)
T ss_dssp             ECSCHH------------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             ecCCcc------------------hhhhhccccccCCc-eEEeechhh
Confidence            765320                  13345555666776 888888854

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.51  E-value=0.00013  Score=52.88  Aligned_cols=96  Identities=16%  Similarity=0.058  Sum_probs=55.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC----CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD----YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |||.|.||||++|+.+++.|+++.    .++..+..+....+.      ......... ..+..+    ...++++|++|
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~------~~~~~~~~~-~~~~~~----~~~~~~~DvvF   69 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA------PNFGKDAGM-LHDAFD----IESLKQLDAVI   69 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC------CCSSSCCCB-CEETTC----HHHHTTCSEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc------cccCCccee-eecccc----hhhhccccEEE
Confidence            579999999999999999888643    455555543332111      000011000 011122    23457899999


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC-EEEEeccccc
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK-RVIVVSSGVA  130 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~-~iv~~SS~~~  130 (319)
                      .+...          ..        +..+...+.+.+.+ .+|=.||...
T Consensus        70 ~alp~----------~~--------s~~~~~~l~~~g~~~~VIDlSsdfR  101 (147)
T d1mb4a1          70 TCQGG----------SY--------TEKVYPALRQAGWKGYWIDAASTLR  101 (147)
T ss_dssp             ECSCH----------HH--------HHHHHHHHHHTTCCSEEEESSSTTT
T ss_pred             EecCc----------hH--------HHHHhHHHHHcCCceEEEeCCcccc
Confidence            87632          11        34566777778875 5777887543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.51  E-value=4.4e-05  Score=56.98  Aligned_cols=34  Identities=24%  Similarity=0.414  Sum_probs=30.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |||.|.|. |.+|+.+++.|.++|++|++.+|+++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~   34 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQS   34 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCch
Confidence            57999977 99999999999999999999998754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.48  E-value=0.00011  Score=55.70  Aligned_cols=74  Identities=20%  Similarity=0.160  Sum_probs=50.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHh--cCcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAI--VGCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d   78 (319)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++++  +...+++.     +...+ .|..+.+   .+.+..  +++|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~--~~~~l~~~-----Ga~~v-i~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA--KREMLSRL-----GVEYV-GDSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH--HHHHHHTT-----CCSEE-EETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccc--cccccccc-----ccccc-ccCCccCHHHHHHHHhCCCCEE
Confidence            3579999999999999999988889999999998654  33344432     22222 2444433   333333  3589


Q ss_pred             eEEEecc
Q 020924           79 GVFHIAC   85 (319)
Q Consensus        79 ~vi~~a~   85 (319)
                      +++++++
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999876

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.48  E-value=0.00061  Score=45.39  Aligned_cols=70  Identities=19%  Similarity=0.255  Sum_probs=47.1

Q ss_pred             CCeEEEeCcchHHH-HHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTGAGGFLA-SWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .|+|.+.|- |.+| ++||+.|.++|++|.+-++..... ...+.+     .++.+..++-  .+    .+.++|.||..
T Consensus         8 ~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~-~~~L~~-----~Gi~v~~g~~--~~----~i~~~d~vV~S   74 (96)
T d1p3da1           8 VQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVV-TQRLAQ-----AGAKIYIGHA--EE----HIEGASVVVVS   74 (96)
T ss_dssp             CCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHH-HHHHHH-----TTCEEEESCC--GG----GGTTCSEEEEC
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChh-hhHHHH-----CCCeEEECCc--cc----cCCCCCEEEEC
Confidence            478999976 4455 678999999999999999876543 223332     3566655432  22    23578999988


Q ss_pred             cccC
Q 020924           84 ACPA   87 (319)
Q Consensus        84 a~~~   87 (319)
                      .|..
T Consensus        75 ~AI~   78 (96)
T d1p3da1          75 SAIK   78 (96)
T ss_dssp             TTSC
T ss_pred             CCcC
Confidence            7753

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.41  E-value=3.9e-05  Score=57.38  Aligned_cols=44  Identities=32%  Similarity=0.334  Sum_probs=35.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYEL   50 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~   50 (319)
                      +..|||+||+|.+|...++.....|++|+++.+++++  ...++++
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~~~~l   67 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA--ADYLKQL   67 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST--HHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH--HHHHHhh
Confidence            4579999999999999998777889999999998774  3344443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.40  E-value=0.00023  Score=53.10  Aligned_cols=75  Identities=11%  Similarity=0.015  Sum_probs=50.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC-ChhhHHHHhcCcceEEE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL-DYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vi~   82 (319)
                      .+.+|+|+|+ |.+|...++.+...|.+|+++++++.+  ....+++     +...+. |.. +.+..+...+.+|.++.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k--~~~a~~l-----Ga~~~i-~~~~~~~~~~~~~~~~d~vi~   97 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRK--REDAMKM-----GADHYI-ATLEEGDWGEKYFDTFDLIVV   97 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTT--HHHHHHH-----TCSEEE-EGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhH--HHHhhcc-----CCcEEe-eccchHHHHHhhhcccceEEE
Confidence            4679999987 999999998877889999999998764  2333333     222221 222 23334445557899999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +.+..
T Consensus        98 ~~~~~  102 (168)
T d1piwa2          98 CASSL  102 (168)
T ss_dssp             CCSCS
T ss_pred             EecCC
Confidence            87643

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.00024  Score=53.14  Aligned_cols=75  Identities=20%  Similarity=0.121  Sum_probs=49.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .++|+|+|.|+ |..+++++-.|.+.|.+|+++.|+.++.  ..+.+.......++.  .+..+.     ...++|+|||
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka--~~l~~~~~~~~~~~~--~~~~~~-----~~~~~dliIN   85 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA--EELAKLFAHTGSIQA--LSMDEL-----EGHEFDLIIN   85 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH--HHHHHHTGGGSSEEE--CCSGGG-----TTCCCSEEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHH--HHHHHHHhhcccccc--cccccc-----cccccceeec
Confidence            56899999998 8899999999999999999999987643  232222111122332  222221     1246899999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +....
T Consensus        86 ~Tp~G   90 (170)
T d1nyta1          86 ATSSG   90 (170)
T ss_dssp             CCSCG
T ss_pred             ccccC
Confidence            87543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.32  E-value=0.00016  Score=54.69  Aligned_cols=78  Identities=15%  Similarity=0.061  Sum_probs=51.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhc-cCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEK-ASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |+|.|.|+ |..|.+++..|.++|++|++..|..+......+..-.. ..........++.-..++.++++++|.||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            58999988 99999999999999999999988655433222222110 00011111112333567888999999998864

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.31  E-value=0.00014  Score=53.99  Aligned_cols=65  Identities=17%  Similarity=0.210  Sum_probs=46.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |++|.+.|- |.+|+++++.|+++||+|++.+|+....  ..+...     +       ........++++.+|+|+-+.
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~--~~~~~~-----~-------~~~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAV--DGLVAA-----G-------ASAARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHH--HHHHHT-----T-------CEECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhh--hhhhhh-----h-------ccccchhhhhccccCeeeecc
Confidence            568999966 9999999999999999999999875532  222221     1       111124556777888888775

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00014  Score=54.14  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=32.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |||+|.|+ |.+|+.++..|++.|++|++++|++..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            68999999 999999999999999999999998764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.00041  Score=51.67  Aligned_cols=74  Identities=14%  Similarity=0.112  Sum_probs=53.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      .+.+|+|.|+ |.+|...++.+...|.++++++++.++  ....+++     +... ..|..+.+......+++|++|.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~--~~~a~~l-----Gad~-~i~~~~~~~~~~~~~~~D~vid~  100 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK--REAAKAL-----GADE-VVNSRNADEMAAHLKSFDFILNT  100 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHH-----TCSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhH--HHHHhcc-----CCcE-EEECchhhHHHHhcCCCceeeee
Confidence            3678999986 889999998888899999998887653  3333333     2222 23666666666666789999999


Q ss_pred             ccc
Q 020924           84 ACP   86 (319)
Q Consensus        84 a~~   86 (319)
                      ++.
T Consensus       101 ~g~  103 (168)
T d1uufa2         101 VAA  103 (168)
T ss_dssp             CSS
T ss_pred             eec
Confidence            864

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=9.8e-05  Score=55.66  Aligned_cols=36  Identities=33%  Similarity=0.343  Sum_probs=32.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      ..|||+||+|.+|+..++.....|++|+++++++++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            489999999999999998888899999999998764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.20  E-value=0.00057  Score=50.99  Aligned_cols=75  Identities=19%  Similarity=0.132  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .++++|+|.|+ |..|++++..|.+.+.+|+++.|+.++.  ..+.+.......+.....|-.       .+.++|+|||
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a--~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN   85 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT--KELAERFQPYGNIQAVSMDSI-------PLQTYDLVIN   85 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH--HHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHH--HHHHHHHhhccccchhhhccc-------cccccceeee
Confidence            46789999988 8889999999999889999999987643  222222121223444443321       1357899999


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +....
T Consensus        86 ~tp~g   90 (171)
T d1p77a1          86 ATSAG   90 (171)
T ss_dssp             CCCC-
T ss_pred             ccccc
Confidence            87644

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.17  E-value=0.0011  Score=48.27  Aligned_cols=64  Identities=20%  Similarity=0.180  Sum_probs=46.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |||.|.|. |.+|+.+++.|+++|++|++.+|+.++.........            .+.  +...++++++|+||-+.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~------------~~~--~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTV------------GVT--ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHH------------TCE--ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcc------------ccc--ccHHHHHhhcCeEEEEe
Confidence            57999966 999999999999999999998887765432222221            111  12345678899999875

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.13  E-value=0.0002  Score=53.01  Aligned_cols=64  Identities=19%  Similarity=0.266  Sum_probs=46.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |||.|.|- |.+|+.+++.|+++||+|++.+|++++.  ..+.+.     +...       .....++.+++|+||-|.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~--~~~~~~-----~~~~-------~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAI--ADVIAA-----GAET-------ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH--HHHHHT-----TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchh--HHHHHh-----hhhh-------cccHHHHHhCCCeEEEEc
Confidence            57999976 9999999999999999999999876532  222221     2221       124556777889998876

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.10  E-value=0.00067  Score=51.03  Aligned_cols=64  Identities=22%  Similarity=0.243  Sum_probs=50.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|. |-||+.+++.|..-|.+|++.+|.+.+.                    +..-.+++++++..+|+|+.
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~--------------------~~~~~~~l~ell~~sDiv~~   98 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG--------------------PWRFTNSLEEALREARAAVC   98 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS--------------------SSCCBSCSHHHHTTCSEEEE
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccccc--------------------ceeeeechhhhhhccchhhc
Confidence            56799999987 8999999999999999999999876531                    11122357889999999998


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +....
T Consensus        99 ~~pl~  103 (181)
T d1qp8a1          99 ALPLN  103 (181)
T ss_dssp             CCCCS
T ss_pred             ccccc
Confidence            76543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.09  E-value=0.00027  Score=52.86  Aligned_cols=34  Identities=21%  Similarity=0.213  Sum_probs=27.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTARE   38 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (319)
                      |++|.|.||||++|+.+++.|.++- .++..+.-+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            5799999999999999999998754 566665533

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.08  E-value=0.00071  Score=47.86  Aligned_cols=69  Identities=13%  Similarity=0.099  Sum_probs=52.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH-hcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA-IVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   84 (319)
                      |.|+|+|. |-+|+.+++.|.  |++|.++..++...  ..+..     .++.++.+|.++++.|+.+ +++++.+|-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~--~~~~~-----~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVR--KKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHH--HHHHH-----TTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHH--HHHHh-----cCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            57899987 888999999994  67788888776632  22221     4789999999999988875 45788888643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.06  E-value=0.00051  Score=50.21  Aligned_cols=65  Identities=17%  Similarity=0.038  Sum_probs=45.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |||.+.|+ |.+|+++++.|++.|++|++.+|+.++.  ..+.+..    ++.+       ..+..++++++|+||-+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~--~~l~~~~----g~~~-------~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERS--KEIAEQL----ALPY-------AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHH--HHHHHHH----TCCB-------CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhH--Hhhcccc----ceee-------echhhhhhhccceeeeec
Confidence            57999966 9999999999999999999998875532  2222211    1111       124566778999999764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.04  E-value=0.0012  Score=49.00  Aligned_cols=76  Identities=20%  Similarity=0.062  Sum_probs=49.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC--ChhhHHHHh-----cC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLL--DYDSVKSAI-----VG   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~-----~~   76 (319)
                      .+.+|+|+| +|.+|...++.+...|.+|+++++++.+  ....+++   ... ..+..|-.  +...+.+.+     .+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r--~~~a~~~---ga~-~~~~~~~~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRR--LEVAKNC---GAD-VTLVVDPAKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHT---TCS-EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHH--HHHHHHc---CCc-EEEeccccccccchhhhhhhcccccC
Confidence            357899997 5899999998888899999999987653  3333332   112 22333332  223333333     25


Q ss_pred             cceEEEeccc
Q 020924           77 CNGVFHIACP   86 (319)
Q Consensus        77 ~d~vi~~a~~   86 (319)
                      +|+||.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            8999999863

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.03  E-value=0.0011  Score=46.85  Aligned_cols=88  Identities=18%  Similarity=0.149  Sum_probs=59.6

Q ss_pred             CCCeEEEeCcc---hHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcce
Q 020924            4 EKERVCVTGAG---GFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNG   79 (319)
Q Consensus         4 ~~~~vlItGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   79 (319)
                      .-++|.|.|+|   +..|..+.+.|.+.| ++|+.+..+....            .+.+.+ -++.+      +-..+|.
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i------------~G~~~y-~sl~d------lp~~vDl   67 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV------------QGVKAY-KSVKD------IPDEIDL   67 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE------------TTEECB-SSTTS------CSSCCSE
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc------------CCeEee-cchhh------cCCCCce
Confidence            45899999999   999999999998766 7898886543321            122221 23333      2346787


Q ss_pred             EEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccc
Q 020924           80 VFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG  128 (319)
Q Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~  128 (319)
                      ++-+...          .        .+..+++.|.+.|++.++.+|+.
T Consensus        68 vvi~vp~----------~--------~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          68 AIIVVPK----------R--------FVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             EEECSCH----------H--------HHHHHHHHHHHHTCCEEEECCCS
T ss_pred             EEEecCh----------H--------HhHHHHHHHHHcCCCEEEEeccc
Confidence            7765421          1        14458889999999999998874

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.03  E-value=0.0044  Score=40.34  Aligned_cols=83  Identities=18%  Similarity=0.166  Sum_probs=54.9

Q ss_pred             CeEEEeCcchHHHH-HHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            6 ERVCVTGAGGFLAS-WVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         6 ~~vlItGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      |+|-++|- |.+|. .|++.|.++|+.|.+-++...+. ...|+.     .++++..+.  +.+.    ++++|.||...
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~-t~~L~~-----~Gi~i~~gh--~~~~----i~~~d~vV~Ss   68 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETER-TAYLRK-----LGIPIFVPH--SADN----WYDPDLVIKTP   68 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHH-----TTCCEESSC--CTTS----CCCCSEEEECT
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChh-HHHHHH-----CCCeEEeee--cccc----cCCCCEEEEec
Confidence            67889987 44554 78999999999999999886543 333443     255554431  2222    35789999987


Q ss_pred             ccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC
Q 020924           85 CPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV  119 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~  119 (319)
                      |...    .+|              -+.+|++.++
T Consensus        69 AI~~----~np--------------el~~A~~~gI   85 (89)
T d1j6ua1          69 AVRD----DNP--------------EIVRARMERV   85 (89)
T ss_dssp             TCCT----TCH--------------HHHHHHHTTC
T ss_pred             CcCC----CCH--------------HHHHHHHcCC
Confidence            7642    244              5667777776

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.01  E-value=0.0011  Score=49.80  Aligned_cols=75  Identities=16%  Similarity=0.110  Sum_probs=48.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCe-EEEEccCCChhhHH----HHhc--
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENL-KLFKADLLDYDSVK----SAIV--   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~----~~~~--   75 (319)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++.  +.+..+++     +. .++...=.+..+..    +...  
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~--~~~~a~~l-----Ga~~vi~~~~~~~~~~~~~i~~~~~~~   99 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN--RLKLAEEI-----GADLTLNRRETSVEERRKAIMDITHGR   99 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH--HHHHHHHT-----TCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccc--cccccccc-----cceEEEeccccchHHHHHHHHHhhCCC
Confidence            4689999997 8999999999988997 7999988765  33333433     22 22222212222222    2222  


Q ss_pred             CcceEEEeccc
Q 020924           76 GCNGVFHIACP   86 (319)
Q Consensus        76 ~~d~vi~~a~~   86 (319)
                      ++|+||.++|.
T Consensus       100 g~Dvvid~vG~  110 (182)
T d1vj0a2         100 GADFILEATGD  110 (182)
T ss_dssp             CEEEEEECSSC
T ss_pred             CceEEeecCCc
Confidence            58999999864

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.99  E-value=0.00059  Score=51.54  Aligned_cols=34  Identities=26%  Similarity=0.443  Sum_probs=28.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTA   36 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~   36 (319)
                      .++.||.|.||||++|+.+++.|.++- .++..+.
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            466789999999999999999998864 5666554

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.97  E-value=0.0018  Score=45.48  Aligned_cols=70  Identities=10%  Similarity=0.154  Sum_probs=49.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEecc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIAC   85 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   85 (319)
                      |||.|.|++|-.|+.+++.+.++|+++.+..-...                .              ..++++|+||.+..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~----------------~--------------~~~~~~DVvIDFS~   50 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG----------------V--------------EELDSPDVVIDFSS   50 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE----------------E--------------EECSCCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc----------------H--------------HHhccCCEEEEecC
Confidence            57999999999999999998899999775431111                0              01246799999753


Q ss_pred             cCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEE
Q 020924           86 PAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV  124 (319)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~  124 (319)
                               | +.        +..+++.|.++++ ++|.
T Consensus        51 ---------p-~~--------~~~~l~~~~~~~~-p~Vi   70 (128)
T d1vm6a3          51 ---------P-EA--------LPKTVDLCKKYRA-GLVL   70 (128)
T ss_dssp             ---------G-GG--------HHHHHHHHHHHTC-EEEE
T ss_pred             ---------H-HH--------HHHHHHHHHhcCC-CEEE
Confidence                     2 22        4458888888887 6655

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0026  Score=47.23  Aligned_cols=75  Identities=11%  Similarity=0.039  Sum_probs=49.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCe-EEEEccCCChhhHHHHh-----cC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENL-KLFKADLLDYDSVKSAI-----VG   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~-----~~   76 (319)
                      .+.+|+|.|+ |.+|...+..+...|. +|+++++++.  +....+++     ++ .++..+-.+.......+     .+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~--rl~~a~~~-----Ga~~~~~~~~~~~~~~~~~~~~~~g~g   97 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT--RLSKAKEI-----GADLVLQISKESPQEIARKVEGQLGCK   97 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH--HHHHHHHT-----TCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH--HHHHHHHh-----CCcccccccccccccccccccccCCCC
Confidence            3578999987 9999999999988998 7999887755  33333332     22 23333334444444433     25


Q ss_pred             cceEEEeccc
Q 020924           77 CNGVFHIACP   86 (319)
Q Consensus        77 ~d~vi~~a~~   86 (319)
                      +|++|.++|.
T Consensus        98 ~Dvvid~~G~  107 (171)
T d1pl8a2          98 PEVTIECTGA  107 (171)
T ss_dssp             CSEEEECSCC
T ss_pred             ceEEEeccCC
Confidence            8999999863

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.92  E-value=0.0004  Score=51.82  Aligned_cols=35  Identities=23%  Similarity=0.406  Sum_probs=29.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC--eEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY--FVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~   40 (319)
                      ||+|+|.|. |.+|..+++.|.+.|+  +|++.+|+++
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~   37 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPE   37 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence            468999976 9999999999999986  6777777644

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.92  E-value=0.00088  Score=49.80  Aligned_cols=74  Identities=15%  Similarity=0.178  Sum_probs=48.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh-----cCcc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI-----VGCN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d   78 (319)
                      +.+|+|+|++|.+|...+..+...| .+|+++++++.  +....+++   +.. .++  |..+.+..+...     +++|
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~--~~~~~~~~---Ga~-~~i--~~~~~~~~~~~~~~~~~~~~d   99 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE--AVEAAKRA---GAD-YVI--NASMQDPLAEIRRITESKGVD   99 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH--HHHHHHHH---TCS-EEE--ETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchh--hHHHHHHc---CCc-eee--ccCCcCHHHHHHHHhhcccch
Confidence            5789999999999999999888888 58888887654  33333333   111 233  333433333332     2489


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|.+++.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99999863

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.85  E-value=0.00093  Score=46.65  Aligned_cols=35  Identities=14%  Similarity=0.238  Sum_probs=32.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            579999988 99999999999999999999998764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.85  E-value=0.001  Score=46.56  Aligned_cols=36  Identities=17%  Similarity=0.131  Sum_probs=32.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +.++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            4679999988 99999999999999999999988653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.0013  Score=49.71  Aligned_cols=74  Identities=14%  Similarity=0.027  Sum_probs=44.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh---hHHHHh-cCcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD---SVKSAI-VGCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d~vi   81 (319)
                      .+|||+||+|.+|+..++.....|.++++.....++.......++     +... ..|..+.+   .+.+.. +++|+|+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad~-vi~~~~~~~~~~~~~~~~~GvDvv~  105 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFDA-AVNYKTGNVAEQLREACPGGVDVYF  105 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCSE-EEETTSSCHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cceE-EeeccchhHHHHHHHHhccCceEEE
Confidence            679999999999999998887789765554433322222222222     1222 23444432   222222 2589999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      ++.|
T Consensus       106 D~vG  109 (187)
T d1vj1a2         106 DNVG  109 (187)
T ss_dssp             ESSC
T ss_pred             ecCC
Confidence            9886

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.83  E-value=0.00053  Score=51.60  Aligned_cols=32  Identities=13%  Similarity=0.210  Sum_probs=27.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR-DYFVHGTA   36 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~   36 (319)
                      |++|.|.||||++|+.+++.|.++ .+++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            679999999999999999999987 56775543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.72  E-value=0.0023  Score=48.50  Aligned_cols=69  Identities=14%  Similarity=0.042  Sum_probs=50.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|. |-||+.+++.|..-|.+|++.++..........               ++....+++++++.+|+|+.
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------------~~~~~~~l~~ll~~sD~i~~  110 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL---------------GLQRVSTLQDLLFHSDCVTL  110 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH---------------TCEECSSHHHHHHHCSEEEE
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhh---------------ccccccchhhccccCCEEEE
Confidence            56789999977 999999999999999999999886553211110               12223467788888898887


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +....
T Consensus       111 ~~plt  115 (193)
T d1mx3a1         111 HCGLN  115 (193)
T ss_dssp             CCCCC
T ss_pred             eeccc
Confidence            66543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.65  E-value=0.002  Score=44.51  Aligned_cols=35  Identities=11%  Similarity=0.047  Sum_probs=32.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378999998 99999999999999999999998765

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.62  E-value=0.0022  Score=44.54  Aligned_cols=35  Identities=14%  Similarity=0.021  Sum_probs=32.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|...
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            478999998 99999999999999999999998754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.62  E-value=0.0024  Score=46.71  Aligned_cols=77  Identities=12%  Similarity=0.109  Sum_probs=58.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      .-+|+|.|+ |-.|..-++.....|.+|++++++.+.  ...++...  ...+++.   ..+.+.+++.++++|+||..+
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~--l~~l~~~~--~~~~~~~---~~~~~~l~~~~~~aDivI~aa  103 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVER--LSYLETLF--GSRVELL---YSNSAEIETAVAEADLLIGAV  103 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHH--GGGSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHH--HHHHHHhh--cccceee---hhhhhhHHHhhccCcEEEEee
Confidence            468999998 999999999999999999999987653  33333322  2234443   357788999999999999988


Q ss_pred             ccCCC
Q 020924           85 CPAPS   89 (319)
Q Consensus        85 ~~~~~   89 (319)
                      -....
T Consensus       104 lipG~  108 (168)
T d1pjca1         104 LVPGR  108 (168)
T ss_dssp             CCTTS
T ss_pred             ecCCc
Confidence            75544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.61  E-value=0.0031  Score=47.05  Aligned_cols=73  Identities=10%  Similarity=0.153  Sum_probs=50.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEec
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +.+|.|.|- |.+|+.+++.|+++||+|++.+|++++..  .+.+....  .....  -....+++.+.+..+|.++-+.
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~--~l~~~~~~--~~~~~--~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVD--DFLANEAK--GTKVL--GAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHH--HHHHTTTT--TSSCE--ECSSHHHHHHHBCSSCEEEECS
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHH--HHHHhccc--ccccc--chhhhhhhhhhhcccceEEEec
Confidence            358999987 99999999999999999999999887432  22211100  00011  1235567777788888888875

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.59  E-value=0.0014  Score=45.46  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=31.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++|+|.|| |++|-.++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            478999998 99999999999999999999998653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.57  E-value=0.0024  Score=48.58  Aligned_cols=66  Identities=12%  Similarity=0.000  Sum_probs=49.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|- |.||+.+++.|..-|.+|++.++......  ..               +.....++.++++.+|+|+.
T Consensus        41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~--~~---------------~~~~~~~l~~~l~~sDii~~  102 (197)
T d1j4aa1          41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPEL--EK---------------KGYYVDSLDDLYKQADVISL  102 (197)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH---------------TTCBCSCHHHHHHHCSEEEE
T ss_pred             ccCCeEEEecc-cccchhHHHhHhhhcccccccCccccccc--cc---------------ceeeeccccccccccccccc
Confidence            45789999976 99999999999999999999887654321  10               11123457888889998887


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      ++..
T Consensus       103 ~~pl  106 (197)
T d1j4aa1         103 HVPD  106 (197)
T ss_dssp             CSCC
T ss_pred             cCCc
Confidence            7654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.56  E-value=0.0022  Score=44.75  Aligned_cols=35  Identities=14%  Similarity=0.168  Sum_probs=32.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |+||..++..|.+.|.+|+++.|.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            479999998 99999999999999999999998764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.0026  Score=46.55  Aligned_cols=59  Identities=12%  Similarity=0.005  Sum_probs=46.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+|+|+|.|.+..+|+-++..|.++|+.|+.......                            .+.+..+++|+||
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------------~l~~~~~~ADivI   85 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------------NLRHHVENADLLI   85 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------------CHHHHHHHCSEEE
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------------hhHHHHhhhhHhh
Confidence            367899999999999999999999999999987654332                            2344556788899


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      ..+|...
T Consensus        86 ~a~G~p~   92 (166)
T d1b0aa1          86 VAVGKPG   92 (166)
T ss_dssp             ECSCCTT
T ss_pred             hhccCcc
Confidence            8887543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0017  Score=44.87  Aligned_cols=35  Identities=23%  Similarity=0.190  Sum_probs=31.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            378999988 99999999999999999999998754

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.53  E-value=0.0028  Score=46.89  Aligned_cols=37  Identities=24%  Similarity=0.280  Sum_probs=32.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD   41 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   41 (319)
                      ++++|+|.|+ |+.|++++..|.+.|. +|+++.|+.++
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            5688999988 9999999999999996 79999998763

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.48  E-value=0.0031  Score=46.93  Aligned_cols=74  Identities=15%  Similarity=0.070  Sum_probs=47.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh---hhHHHHhc--Cc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY---DSVKSAIV--GC   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~   77 (319)
                      ++.+|+|.|+ |.+|...++.+...|. +|+++++++.  +....+++   + -.+++  |..+.   +.+.+...  ++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~--r~~~a~~l---G-a~~~i--~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPI--CVEAAKFY---G-ATDIL--NYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHH--HHHHHHHH---T-CSEEE--CGGGSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccchhh--hHHHHHhh---C-ccccc--cccchhHHHHHHHHhhccCc
Confidence            3678999986 9999999988888896 6888887654  33333333   1 11222  33332   23333333  48


Q ss_pred             ceEEEeccc
Q 020924           78 NGVFHIACP   86 (319)
Q Consensus        78 d~vi~~a~~   86 (319)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.45  E-value=0.005  Score=46.49  Aligned_cols=70  Identities=14%  Similarity=0.046  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.++++.|.|. |.||+.+++.|..-|.+|++.++...........              .....+++.++++.+|+|+.
T Consensus        45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~--------------~~~~~~~l~~ll~~sD~v~l  109 (191)
T d1gdha1          45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY--------------QATFHDSLDSLLSVSQFFSL  109 (191)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH--------------TCEECSSHHHHHHHCSEEEE
T ss_pred             ecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcc--------------cccccCCHHHHHhhCCeEEe
Confidence            45799999987 9999999999999999999988765533221111              11122467888889998887


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +....
T Consensus       110 ~~plt  114 (191)
T d1gdha1         110 NAPST  114 (191)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            66544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.45  E-value=0.0062  Score=44.74  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=31.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .+.+|+|.|+ |.+|...++.+...|.+|+++++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~   62 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDA   62 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhh
Confidence            3678999987 99999999888889999999998755

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.43  E-value=0.0019  Score=45.07  Aligned_cols=34  Identities=21%  Similarity=0.273  Sum_probs=31.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ++++|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            68999988 99999999999999999999998754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.002  Score=48.86  Aligned_cols=38  Identities=13%  Similarity=0.151  Sum_probs=33.7

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |.-++|.|.|| |.+|+.++..++..|++|++.+++++.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            34479999999 999999999999999999999988653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.41  E-value=0.0011  Score=50.22  Aligned_cols=36  Identities=14%  Similarity=0.103  Sum_probs=32.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      -++|.|.|+ |.+|+.++..++..|++|++.+++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            468999999 999999999999999999999987653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.41  E-value=0.0057  Score=45.46  Aligned_cols=76  Identities=14%  Similarity=0.096  Sum_probs=46.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEE-ccCCC-hhhHHHHh--cCcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFK-ADLLD-YDSVKSAI--VGCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~Dl~~-~~~~~~~~--~~~d   78 (319)
                      .+.+|+|.|+ |.+|...+..+...| .+|+++++++.+  .....++    .....+. .|-.+ ........  .++|
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k--~~~a~~~----Ga~~~i~~~~~~~~~~~~~~~~~~~G~D  100 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDK--FAKAKEV----GATECVNPQDYKKPIQEVLTEMSNGGVD  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG--HHHHHHT----TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHH--HHHHHHh----CCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence            3578999999 568999998998887 588888887763  3333332    1112221 12211 11222222  3689


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2jhfa2         101 FSFEVIGR  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEecCCc
Confidence            99998864

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.41  E-value=0.00056  Score=50.09  Aligned_cols=25  Identities=28%  Similarity=0.391  Sum_probs=22.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY   30 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~   30 (319)
                      -+|.|.||||++|+.+++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            4799999999999999998888764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0022  Score=44.93  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=32.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .|+++|.|| |++|-.++..|.+.|.+|+++.|...
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            378999998 99999999999999999999999754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.39  E-value=0.005  Score=46.22  Aligned_cols=69  Identities=16%  Similarity=0.145  Sum_probs=50.0

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.++++.|.|. |.||+.+++.|..-|.+|++.++...+......        .++        ..+++++++++|+|+-
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~--------~~~--------~~~l~ell~~sDiv~~  104 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL--------GIE--------LLSLDDLLARADFISV  104 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH--------TCE--------ECCHHHHHHHCSEEEE
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhc--------Cce--------eccHHHHHhhCCEEEE
Confidence            45789999986 999999999999899999999887664321110        111        2356788889998887


Q ss_pred             ecccCC
Q 020924           83 IACPAP   88 (319)
Q Consensus        83 ~a~~~~   88 (319)
                      +.....
T Consensus       105 ~~Plt~  110 (184)
T d1ygya1         105 HLPKTP  110 (184)
T ss_dssp             CCCCST
T ss_pred             cCCCCc
Confidence            765443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.38  E-value=0.0025  Score=45.16  Aligned_cols=36  Identities=17%  Similarity=0.263  Sum_probs=32.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ..++|+|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3579999988 99999999999999999999998755

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0054  Score=45.10  Aligned_cols=59  Identities=10%  Similarity=0.093  Sum_probs=46.1

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      ++.+|+|+|.|.+..+|+.++..|+++|..|+.......                            .+.+..+++|++|
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~----------------------------~l~~~~~~aDivi   87 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA----------------------------HLDEEVNKGDILV   87 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS----------------------------SHHHHHTTCSEEE
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc----------------------------cHHHHHhhccchh
Confidence            367899999999999999999999999999998765433                            1234456778888


Q ss_pred             EecccCC
Q 020924           82 HIACPAP   88 (319)
Q Consensus        82 ~~a~~~~   88 (319)
                      ..+|...
T Consensus        88 ~a~G~~~   94 (170)
T d1a4ia1          88 VATGQPE   94 (170)
T ss_dssp             ECCCCTT
T ss_pred             hcccccc
Confidence            8777543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.33  E-value=0.0017  Score=47.14  Aligned_cols=37  Identities=14%  Similarity=0.158  Sum_probs=33.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +++|+|||+|| |.+|..-++.|++.|.+|++++....
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~~   47 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLH   47 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            67899999999 99999999999999999999975433

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.29  E-value=0.0074  Score=45.42  Aligned_cols=70  Identities=21%  Similarity=0.108  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|. |.||+.+++.|..-|.+|.+.+|...........              .+....++.++++++|+|+-
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~--------------~~~~~~~l~~~l~~sD~v~~  106 (188)
T d2naca1          42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL--------------NLTWHATREDMYPVCDVVTL  106 (188)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH--------------TCEECSSHHHHGGGCSEEEE
T ss_pred             ccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccc--------------cccccCCHHHHHHhccchhh
Confidence            45789999976 9999999999999999999999875533221111              12223467778889998877


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +....
T Consensus       107 ~~plt  111 (188)
T d2naca1         107 NCPLH  111 (188)
T ss_dssp             CSCCC
T ss_pred             ccccc
Confidence            66543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.27  E-value=0.0022  Score=44.16  Aligned_cols=35  Identities=11%  Similarity=0.077  Sum_probs=31.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            378999988 99999999999999999999988654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0063  Score=44.25  Aligned_cols=69  Identities=14%  Similarity=0.036  Sum_probs=50.6

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|+++|.| .|.||+.+++.|...|.+|++..+.+........               |-.....+++++...|++|-
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~---------------dG~~v~~~~~a~~~adivvt   85 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAM---------------EGYEVTTMDEACQEGNIFVT   85 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---------------TTCEECCHHHHTTTCSEEEE
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhc---------------CceEeeehhhhhhhccEEEe
Confidence            5689999995 5999999999999999999999887543211111               22222347778888999998


Q ss_pred             ecccC
Q 020924           83 IACPA   87 (319)
Q Consensus        83 ~a~~~   87 (319)
                      +.|..
T Consensus        86 aTGn~   90 (163)
T d1li4a1          86 TTGCI   90 (163)
T ss_dssp             CSSCS
T ss_pred             cCCCc
Confidence            87643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.21  E-value=0.012  Score=43.47  Aligned_cols=76  Identities=17%  Similarity=0.103  Sum_probs=53.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccC---------------------
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL---------------------   64 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl---------------------   64 (319)
                      -+|+|.|| |-.|.+-++.....|.+|.+++++...  ...++.+.     -+++..+.                     
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~--~~~l~~l~-----~~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAAT--KEQVESLG-----GKFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTT--HHHHHHTT-----CEECCC-----------------------
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHH--HHHHHHhh-----cceEEEeccccccccccccchhhcCHHHH
Confidence            48999998 999999999999999999999998773  33444331     12221111                     


Q ss_pred             -CChhhHHHHhcCcceEEEecccCCC
Q 020924           65 -LDYDSVKSAIVGCNGVFHIACPAPS   89 (319)
Q Consensus        65 -~~~~~~~~~~~~~d~vi~~a~~~~~   89 (319)
                       .+.+.+.+.+.++|+||-.+-....
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCCc
Confidence             1245566778899999998866544

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.21  E-value=0.0039  Score=43.41  Aligned_cols=32  Identities=22%  Similarity=0.186  Sum_probs=30.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTARE   38 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (319)
                      ++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            68999998 999999999999999999999875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.19  E-value=0.0092  Score=44.26  Aligned_cols=76  Identities=13%  Similarity=0.040  Sum_probs=46.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC--hhhHHHHh--cCcc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLD--YDSVKSAI--VGCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~--~~~d   78 (319)
                      .+.+|+|+|+ |.||...+..+...|. .|++.++++.  +.+..+++    .-..++...-.+  ........  .++|
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~--r~~~a~~~----Ga~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGE--KFPKAKAL----GATDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG--GHHHHHHT----TCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchH--HHHHHHHh----CCCcccCCccchhhhhhhHhhhhcCCCc
Confidence            3578999976 9999999999999997 5777776655  33333333    111232221112  12222222  3689


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|.++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.18  E-value=0.0068  Score=44.95  Aligned_cols=74  Identities=15%  Similarity=0.021  Sum_probs=44.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCC-ChhhHHHHh-----cC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLL-DYDSVKSAI-----VG   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~-----~~   76 (319)
                      .+.+|+|.|+ |.+|...++.+...|. .|+++++++.  +.+..+++     +...+. |.. +.+.....+     .+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~--k~~~ak~l-----Ga~~~i-~~~~~~~~~~~~~~~~~~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKD--KFARAKEF-----GATECI-NPQDFSKPIQEVLIEMTDGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGG--GHHHHHHH-----TCSEEE-CGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHH--HHHHHHHh-----CCcEEE-eCCchhhHHHHHHHHHcCCC
Confidence            3578999998 5789999988888885 5666655544  33333433     222221 222 122233222     36


Q ss_pred             cceEEEeccc
Q 020924           77 CNGVFHIACP   86 (319)
Q Consensus        77 ~d~vi~~a~~   86 (319)
                      +|++|.++|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2fzwa2          99 VDYSFECIGN  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEeeecCCC
Confidence            8999999863

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.14  E-value=0.004  Score=49.05  Aligned_cols=35  Identities=31%  Similarity=0.448  Sum_probs=31.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++|+|+|| |..|..++.+|.++|++|+++.|...
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~~   40 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDLP   40 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            468999999 99999999999999999999998643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.12  E-value=0.0058  Score=46.02  Aligned_cols=37  Identities=5%  Similarity=0.118  Sum_probs=30.9

Q ss_pred             CCeEEE-eCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            5 KERVCV-TGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         5 ~~~vlI-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      +.+++| +||+|.+|+..++.....|.+|+++.|+.+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~   66 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN   66 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence            456666 6999999999998887889999999987664

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.09  E-value=0.0035  Score=51.46  Aligned_cols=36  Identities=19%  Similarity=0.338  Sum_probs=32.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ++|+|+|.|| |+-|...|.+|.++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4689999988 99999999999999999999998765

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.02  E-value=0.0048  Score=46.02  Aligned_cols=37  Identities=19%  Similarity=0.039  Sum_probs=33.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      +.|+|+|.|| |..|...+..|.++||+|+++.+.+..
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            4689999998 999999999999999999999987653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.98  E-value=0.0031  Score=44.01  Aligned_cols=35  Identities=14%  Similarity=0.093  Sum_probs=32.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|.+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            378999998 99999999999999999999998765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.97  E-value=0.0036  Score=47.19  Aligned_cols=36  Identities=14%  Similarity=0.138  Sum_probs=32.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSD   41 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   41 (319)
                      +|||+|.|| |..|...+.+|.++|+ +|+++.|+...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            579999998 9999999999999998 59999987653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.96  E-value=0.006  Score=42.21  Aligned_cols=35  Identities=14%  Similarity=-0.061  Sum_probs=32.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            589999988 99999999999999999999998754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.95  E-value=0.0087  Score=44.19  Aligned_cols=66  Identities=20%  Similarity=0.222  Sum_probs=41.3

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      |++.+|.|.|. |.+|+..++.|.+. +.+++++........           .......     ..+...+.+++|+|+
T Consensus         1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~-----------~~~~~~~-----~~~~~~~~~~~D~Vv   63 (170)
T d1f06a1           1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLD-----------TKTPVFD-----VADVDKHADDVDVLF   63 (170)
T ss_dssp             CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCS-----------SSSCEEE-----GGGGGGTTTTCSEEE
T ss_pred             CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccccc-----------ccccccc-----chhhhhhccccceEE
Confidence            45678999985 99999999999874 688776654433210           1111111     122334456899999


Q ss_pred             Eecc
Q 020924           82 HIAC   85 (319)
Q Consensus        82 ~~a~   85 (319)
                      .+..
T Consensus        64 i~tp   67 (170)
T d1f06a1          64 LCMG   67 (170)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            8754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.93  E-value=0.014  Score=43.27  Aligned_cols=74  Identities=14%  Similarity=0.051  Sum_probs=47.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeE-EEE-ccCCC-hhhHHHHh--cCcc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLK-LFK-ADLLD-YDSVKSAI--VGCN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~-~Dl~~-~~~~~~~~--~~~d   78 (319)
                      +.+|+|+|+ |.+|...+..+...| .+|+++++++++  .+..+++     +.. ++. -|-.+ .+.+.+..  .++|
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~k--l~~Ak~~-----GA~~~in~~~~~~~~~~~~~~~~g~G~d  101 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDK--FEKAMAV-----GATECISPKDSTKPISEVLSEMTGNNVG  101 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG--HHHHHHH-----TCSEEECGGGCSSCHHHHHHHHHTSCCC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHH--HHHHHhc-----CCcEEECccccchHHHHHHHHhccccce
Confidence            578999987 999999999999999 589999987764  3333332     222 221 12111 22233333  3689


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      ++|.+.+.
T Consensus       102 ~vi~~~g~  109 (176)
T d1d1ta2         102 YTFEVIGH  109 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEEeCCc
Confidence            99999764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.92  E-value=0.0032  Score=47.03  Aligned_cols=35  Identities=20%  Similarity=0.189  Sum_probs=31.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |+|-|+|- |.+|+++++.|+++||+|++.+|++++
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~   36 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSK   36 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            47999966 999999999999999999999987664

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.0034  Score=46.01  Aligned_cols=95  Identities=21%  Similarity=0.274  Sum_probs=55.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR-DYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      .++|+|.|++|-.|+.+++.+.+. +.++.+.. |...+.......++....+      .++.-..+++..++.+|+||.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~------~~~~~~~~~~~~~~~~DViID   77 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGK------TGVTVQSSLDAVKDDFDVFID   77 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSC------CSCCEESCSTTTTTSCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhcccc------CCceeeccHHHHhcccceEEE
Confidence            468999999999999999999764 67765544 3322110000000000000      111111233345678899999


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEE
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV  124 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~  124 (319)
                      +.         .| +        ++..+++.|.++++ .+|.
T Consensus        78 Fs---------~p-~--------~~~~~~~~a~~~~~-~~Vi  100 (162)
T d1diha1          78 FT---------RP-E--------GTLNHLAFCRQHGK-GMVI  100 (162)
T ss_dssp             CS---------CH-H--------HHHHHHHHHHHTTC-EEEE
T ss_pred             ec---------cH-H--------HHHHHHHHHHhccc-eeEE
Confidence            75         22 2        24468889988886 6665

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.009  Score=44.92  Aligned_cols=67  Identities=12%  Similarity=0.019  Sum_probs=49.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|. |.||+.+++.|..-|.+|++.++......           .       .....+.++++++.+|+|+.
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------~-------~~~~~~~l~ell~~sDii~i  102 (188)
T d1sc6a1          42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPL-----------G-------NATQVQHLSDLLNMSDVVSL  102 (188)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCC-----------T-------TCEECSCHHHHHHHCSEEEE
T ss_pred             ccceEEEEeec-ccchhhhhhhcccccceEeeccccccchh-----------h-------hhhhhhhHHHHHhhccceee
Confidence            45789999966 99999999999999999999987644210           0       01112367788888999888


Q ss_pred             ecccCC
Q 020924           83 IACPAP   88 (319)
Q Consensus        83 ~a~~~~   88 (319)
                      ++....
T Consensus       103 ~~plt~  108 (188)
T d1sc6a1         103 HVPENP  108 (188)
T ss_dssp             CCCSST
T ss_pred             cccCCc
Confidence            775543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.87  E-value=0.0067  Score=46.10  Aligned_cols=65  Identities=18%  Similarity=0.177  Sum_probs=48.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+++|.|.|. |-||+.+++.|..-|.+|++.++......          ...+        +..+++++++.+|+|+.
T Consensus        43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~----------~~~~--------~~~~l~~l~~~~D~v~~  103 (199)
T d1dxya1          43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD----------HPDF--------DYVSLEDLFKQSDVIDL  103 (199)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC----------CTTC--------EECCHHHHHHHCSEEEE
T ss_pred             ccceeeeeeec-ccccccccccccccceeeeccCCccchhh----------hcch--------hHHHHHHHHHhccccee
Confidence            45689999977 99999999999999999999988654310          0111        22357778888998887


Q ss_pred             eccc
Q 020924           83 IACP   86 (319)
Q Consensus        83 ~a~~   86 (319)
                      +...
T Consensus       104 ~~pl  107 (199)
T d1dxya1         104 HVPG  107 (199)
T ss_dssp             CCCC
T ss_pred             eecc
Confidence            6643

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.87  E-value=0.008  Score=44.20  Aligned_cols=82  Identities=16%  Similarity=0.049  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccC--CChhhHHHHhcCcce
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADL--LDYDSVKSAIVGCNG   79 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~d~   79 (319)
                      +++||+|+|.|-+.-+|+-++..|+++|..|+....+..... ..-..+.-    ......|+  ...+.+++....+|+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF-TRGESLKL----NKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE-ESCCCSSC----CCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc-ccccceee----eeeccccccccchhHHhhccccCCE
Confidence            467899999999999999999999999999987654321100 00000000    00011122  245668888889999


Q ss_pred             EEEecccCC
Q 020924           80 VFHIACPAP   88 (319)
Q Consensus        80 vi~~a~~~~   88 (319)
                      ||..+|...
T Consensus       101 vIsavG~p~  109 (171)
T d1edza1         101 VITGVPSEN  109 (171)
T ss_dssp             EEECCCCTT
T ss_pred             EEEccCCCc
Confidence            999887644

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.86  E-value=0.0036  Score=45.41  Aligned_cols=34  Identities=24%  Similarity=0.242  Sum_probs=30.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   40 (319)
                      |+|.+.|+ |.+|+++++.|++.| ++|++.+|+++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChh
Confidence            57999987 999999999998877 99999998865

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.85  E-value=0.022  Score=42.00  Aligned_cols=74  Identities=12%  Similarity=-0.030  Sum_probs=45.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEE-EEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHH---HHhc-Ccc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHG-TAREPSDEKNARLYELEKASENLKLFKADLLDYDSVK---SAIV-GCN   78 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~-~~d   78 (319)
                      .+.+|+|.|+ |.+|...+..+...|.++++ +++++.  +....+++    .-.+++  |..+.+..+   ++.. ++|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~--k~~~a~~~----Ga~~~i--~~~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVES--RLELAKQL----GATHVI--NSKTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHH--HHHHHHHH----TCSEEE--ETTTSCHHHHHHHHTTSCEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHH--HHHHHHHc----CCeEEE--eCCCcCHHHHHHHHcCCCCc
Confidence            3578999997 99999999888888876554 444433  33333333    112333  444433222   3322 489


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      +||.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999863

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.81  E-value=0.006  Score=48.20  Aligned_cols=37  Identities=19%  Similarity=0.198  Sum_probs=33.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +..+||+|+|| |..|..++..|.++|++|+++.|++.
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            45679999999 99999999999999999999998654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.81  E-value=0.018  Score=46.05  Aligned_cols=35  Identities=11%  Similarity=0.101  Sum_probs=31.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR   37 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (319)
                      ++++++|+|-|- |.+|+++++.|.+.|.+|++++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            467899999987 99999999999999999998874

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.77  E-value=0.0069  Score=42.25  Aligned_cols=35  Identities=6%  Similarity=0.031  Sum_probs=31.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            478999998 99999999999999999999988654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=95.75  E-value=0.028  Score=43.90  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=31.5

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR   37 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (319)
                      ++++++|+|-|- |.+|+++++.|.+.|.+|++++-
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            467899999975 99999999999999999988774

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.72  E-value=0.017  Score=42.52  Aligned_cols=75  Identities=19%  Similarity=0.067  Sum_probs=44.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      +.+|+|.|+ |.+|...++.+...|. .|+++++++.  +....+++    ...+++..+=.+.+...+...  ++|++|
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~--k~~~~~~~----ga~~~i~~~~~~~~~~~~~~~~~g~d~vi  105 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE--KLKLAERL----GADHVVDARRDPVKQVMELTRGRGVNVAM  105 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH--HHHHHHHT----TCSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhH--HHHHHhhc----ccceeecCcccHHHHHHHhhCCCCceEEE
Confidence            578999986 9999999988877775 5666666543  33333332    122343322112222333322  589999


Q ss_pred             Eeccc
Q 020924           82 HIACP   86 (319)
Q Consensus        82 ~~a~~   86 (319)
                      .+++.
T Consensus       106 d~~g~  110 (172)
T d1h2ba2         106 DFVGS  110 (172)
T ss_dssp             ESSCC
T ss_pred             EecCc
Confidence            99863

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.70  E-value=0.0096  Score=44.23  Aligned_cols=81  Identities=16%  Similarity=0.158  Sum_probs=46.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhcc-C---CCeEEE-EccCCChhhHHHHhcCcc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKA-S---ENLKLF-KADLLDYDSVKSAIVGCN   78 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~-~---~~~~~~-~~Dl~~~~~~~~~~~~~d   78 (319)
                      |-||.|-| .|-||+.+++.|.++ +.+|.++....+......+...... +   .....+ ...+.-...+..++.++|
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            45899998 699999999999975 5788887754433222222211100 0   000000 001111223455566899


Q ss_pred             eEEEeccc
Q 020924           79 GVFHIACP   86 (319)
Q Consensus        79 ~vi~~a~~   86 (319)
                      +||.|.|.
T Consensus        80 iViecTG~   87 (178)
T d1b7go1          80 IVVDTTPN   87 (178)
T ss_dssp             EEEECCST
T ss_pred             EEEECCCC
Confidence            99999875

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.70  E-value=0.013  Score=40.09  Aligned_cols=82  Identities=24%  Similarity=0.322  Sum_probs=53.8

Q ss_pred             CeEEEeCcc---hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            6 ERVCVTGAG---GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         6 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      |+|.|.|+|   +-.|..+++.|++.||+|+.+..+....            .++..       ..++.++-..+|.++-
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i------------~G~~~-------y~sl~~lp~~~D~vvi   62 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------EGLKC-------YRSVRELPKDVDVIVF   62 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------TTEEC-------BSSGGGSCTTCCEEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc------------cCccc-------cccchhccccceEEEE
Confidence            689999988   7899999999999999998875433211            11222       1233333446787776


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEE
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIV  124 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~  124 (319)
                      +...          .        .+..+++.|.+.|++.+++
T Consensus        63 ~vp~----------~--------~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          63 VVPP----------K--------VGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             CSCH----------H--------HHHHHHHHHHHTTCCEEEE
T ss_pred             EeCH----------H--------HHHHHHHHHHhcCCceEEe
Confidence            5321          1        1445778888899976655

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.63  E-value=0.012  Score=43.03  Aligned_cols=73  Identities=21%  Similarity=0.127  Sum_probs=46.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCC---hhhHHHHhcCcceE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLD---YDSVKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~d~v   80 (319)
                      .+.+|+|.|+ |-+|...++.+...|++|++++++++  +....+++     ++..+. |..+   .+.+.....+.+.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~--r~~~~k~~-----Ga~~~~-~~~~~~~~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDE--KLELAKEL-----GADLVV-NPLKEDAAKFMKEKVGGVHAA   97 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH--HHHHHHHT-----TCSEEE-CTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHH--Hhhhhhhc-----Ccceec-ccccchhhhhcccccCCCceE
Confidence            3578999976 88999999888889999999987655  33333332     233332 3222   23344455566766


Q ss_pred             EEecc
Q 020924           81 FHIAC   85 (319)
Q Consensus        81 i~~a~   85 (319)
                      |.+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            66553

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.62  E-value=0.029  Score=41.34  Aligned_cols=74  Identities=15%  Similarity=0.038  Sum_probs=46.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh----hhHHHHh--cC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY----DSVKSAI--VG   76 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~--~~   76 (319)
                      .+.+|+|.|+ |.+|...++.+...|. +|+++++++++  .+..+++     +.+.+ .|..+.    +......  .+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~k--l~~a~~l-----Ga~~~-i~~~~~d~~~~~~~~~~~~~G   97 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDK--FPKAIEL-----GATEC-LNPKDYDKPIYEVICEKTNGG   97 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG--HHHHHHT-----TCSEE-ECGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHH--HHHHHHc-----CCcEE-EcCCCchhHHHHHHHHhcCCC
Confidence            4678999986 9999999999988885 78888877653  3333332     22222 132221    2222222  25


Q ss_pred             cceEEEeccc
Q 020924           77 CNGVFHIACP   86 (319)
Q Consensus        77 ~d~vi~~a~~   86 (319)
                      +|++|.+++.
T Consensus        98 ~d~vid~~g~  107 (174)
T d1p0fa2          98 VDYAVECAGR  107 (174)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEEcCCC
Confidence            8999998763

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.53  E-value=0.0058  Score=48.72  Aligned_cols=32  Identities=16%  Similarity=0.119  Sum_probs=29.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|+|| |..|..++.+|+++|++|+++.+...
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~~   38 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGTM   38 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            999998 99999999999999999999998653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.53  E-value=0.0067  Score=48.97  Aligned_cols=35  Identities=26%  Similarity=0.130  Sum_probs=31.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +|||+|+|| |.-|...+.+|.++|++|+++.+++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            489999988 99999999999999999999987654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.47  E-value=0.011  Score=45.84  Aligned_cols=37  Identities=27%  Similarity=0.165  Sum_probs=32.7

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      ++++++|+|-|- |.+|+++++.|.+.|.+|++.+.+.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccH
Confidence            367899999987 9999999999999999999887553

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.11  Score=40.47  Aligned_cols=104  Identities=17%  Similarity=0.151  Sum_probs=62.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHH-HHHhhhccCCCeEEEEccC-
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNA-RLYELEKASENLKLFKADL-   64 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~~~~~~~~Dl-   64 (319)
                      +++|+|.|+ |.+|++++..|+..|. ++++++.+.-+.                 +.. ..+.+....+.+++...+. 
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~  108 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  108 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhh
Confidence            478999997 8899999999999995 677776431111                 111 1112222234444444433 


Q ss_pred             CChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           65 LDYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        65 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      .+.+.....+...|++|.+..         .        ......+-++|+++++ .+|+-+.
T Consensus       109 ~~~~~~~~~~~~~divid~~d---------~--------~~~~~~in~~~~~~~i-p~i~g~~  153 (247)
T d1jw9b_         109 LDDAELAALIAEHDLVLDCTD---------N--------VAVRNQLNAGCFAAKV-PLVSGAA  153 (247)
T ss_dssp             CCHHHHHHHHHTSSEEEECCS---------S--------HHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             hhhccccccccccceeeeccc---------h--------hhhhhhHHHHHHHhCC-Ccccccc
Confidence            234556666778899988641         1        1123346667777776 6776444

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.44  E-value=0.011  Score=44.74  Aligned_cols=37  Identities=16%  Similarity=0.147  Sum_probs=32.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      ++++++|+|.|- |.+|+++++.|.+.|.+|++.+.+.
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~   60 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDT   60 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchH
Confidence            478899999985 9999999999999999999877553

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.42  E-value=0.0094  Score=37.46  Aligned_cols=36  Identities=19%  Similarity=0.205  Sum_probs=32.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      +|+|.|.|| |.+|+-++..-.+.|++|++++-+++.
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            479999988 999999999999999999999876554

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.40  E-value=0.015  Score=41.19  Aligned_cols=85  Identities=24%  Similarity=0.155  Sum_probs=55.5

Q ss_pred             CCeEEEeCcc---hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAG---GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      .++|.|.|+|   +-.|..+++.|.+.||+|+.+..+....            .+...       ..++.++-..+|.++
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i------------~G~~~-------~~sl~dlp~~iD~v~   79 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV------------LGRKC-------YPSVLDIPDKIEVVD   79 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------TTEEC-------BSSGGGCSSCCSEEE
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc------------CCCcc-------cccccccCccceEEE
Confidence            4789999998   8899999999999999998876443211            11111       122333334567766


Q ss_pred             EecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEec
Q 020924           82 HIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVS  126 (319)
Q Consensus        82 ~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~S  126 (319)
                      -+...                  .....+++.|.+.|++.+++.+
T Consensus        80 i~vp~------------------~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          80 LFVKP------------------KLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHHTCSEEEECT
T ss_pred             EEeCH------------------HHHHHHHHHHHHhCCCEEEEec
Confidence            65321                  1245688888888997666533

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.40  E-value=0.017  Score=41.69  Aligned_cols=70  Identities=11%  Similarity=0.016  Sum_probs=51.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEE
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFH   82 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   82 (319)
                      +.+|+++|.|= |.+|+.++++|...|.+|+++.++|-......       .+++++        ..++++++..|++|-
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-------mdGf~v--------~~~~~a~~~aDi~vT   84 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-------MEGFNV--------VTLDEIVDKGDFFIT   84 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-------TTTCEE--------CCHHHHTTTCSEEEE
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHH-------hcCCcc--------CchhHccccCcEEEE
Confidence            46899999976 99999999999999999999887764321111       233333        346778888899998


Q ss_pred             ecccCC
Q 020924           83 IACPAP   88 (319)
Q Consensus        83 ~a~~~~   88 (319)
                      ..|...
T Consensus        85 aTGn~~   90 (163)
T d1v8ba1          85 CTGNVD   90 (163)
T ss_dssp             CCSSSS
T ss_pred             cCCCCc
Confidence            877543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.17  E-value=0.01  Score=43.72  Aligned_cols=34  Identities=21%  Similarity=0.136  Sum_probs=29.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREP   39 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~   39 (319)
                      +|+|+|.|| |++|-.++.+|.+.+  .+|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            789999999 999999999999877  4788887665

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.95  E-value=0.038  Score=39.50  Aligned_cols=36  Identities=8%  Similarity=0.193  Sum_probs=30.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   40 (319)
                      ||+|.|.|+||-||...++-+.+.  .++|.++.=+..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN   38 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence            578999999999999999988764  489988886554

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.90  E-value=0.011  Score=47.52  Aligned_cols=34  Identities=24%  Similarity=0.101  Sum_probs=30.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|+|+|| |.-|...+.+|.++|++|+++.++..
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            46999998 99999999999999999999988654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.90  E-value=0.018  Score=41.55  Aligned_cols=36  Identities=17%  Similarity=0.064  Sum_probs=29.6

Q ss_pred             CCeEEEe-CcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVT-GAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ++.++|. .+.||+|..++..|.+.|.+|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3556665 34499999999999999999999998754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.89  E-value=0.063  Score=38.32  Aligned_cols=36  Identities=22%  Similarity=0.267  Sum_probs=30.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   40 (319)
                      +|+|.|.|+||-||....+-+.+.  .++|.++.-+..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN   39 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC
Confidence            589999999999999999988764  589998886654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.87  E-value=0.011  Score=43.84  Aligned_cols=37  Identities=19%  Similarity=0.150  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      .++|+|+|.|+ |+.+++++..|.+.| +|+++.|+.++
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~k   52 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEK   52 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhH
Confidence            57899999988 889999999997776 99999998664

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.79  E-value=0.066  Score=40.16  Aligned_cols=75  Identities=13%  Similarity=0.034  Sum_probs=47.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCCh---hhHHHHhc--Cc
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDY---DSVKSAIV--GC   77 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~   77 (319)
                      .+.+|+|.|+ |.+|...+..+...|. +|+++++++.  +....+++     +...+. |-.+.   +.+.+...  ++
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~--rl~~a~~~-----Ga~~~~-~~~~~~~~~~i~~~t~g~g~   95 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA--RLAHAKAQ-----GFEIAD-LSLDTPLHEQIAALLGEPEV   95 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH--HHHHHHHT-----TCEEEE-TTSSSCHHHHHHHHHSSSCE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccch--hhHhhhhc-----cccEEE-eCCCcCHHHHHHHHhCCCCc
Confidence            4679999986 9999888887777775 7888876654  33333332     334332 33222   23444433  58


Q ss_pred             ceEEEecccC
Q 020924           78 NGVFHIACPA   87 (319)
Q Consensus        78 d~vi~~a~~~   87 (319)
                      |++|.+.|..
T Consensus        96 D~vid~vG~~  105 (195)
T d1kola2          96 DCAVDAVGFE  105 (195)
T ss_dssp             EEEEECCCTT
T ss_pred             EEEEECcccc
Confidence            9999998844

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.013  Score=49.88  Aligned_cols=77  Identities=18%  Similarity=0.117  Sum_probs=48.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCChh-----------------hHH-HHHhhhccCC--CeEEEEcc
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPSDE-----------------KNA-RLYELEKASE--NLKLFKAD   63 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~--~~~~~~~D   63 (319)
                      +.+|||.|+ |.+|+++++.|+..|. ++++++.+.-..                 +.. ..+.+....+  +++.+..+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  115 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK  115 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence            468999999 7799999999999996 688887542111                 011 1111111123  44555556


Q ss_pred             CCChhhHHHHhcCcceEEEec
Q 020924           64 LLDYDSVKSAIVGCNGVFHIA   84 (319)
Q Consensus        64 l~~~~~~~~~~~~~d~vi~~a   84 (319)
                      +.+..  ...++++|+||.+.
T Consensus       116 i~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         116 IQDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             GGGBC--HHHHTTCSEEEECC
T ss_pred             ccchH--HHHHHhcchheecc
Confidence            65433  35678899999864

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.65  E-value=0.0083  Score=44.27  Aligned_cols=120  Identities=10%  Similarity=-0.024  Sum_probs=64.8

Q ss_pred             CCeEEEeCc-chHHHHHHHHHHHHC----CCeEEEEEcCCChhhHHHHHhhhcc---CCCeEEEEccCCChhhHHHHhcC
Q 020924            5 KERVCVTGA-GGFLASWVVKLLLSR----DYFVHGTAREPSDEKNARLYELEKA---SENLKLFKADLLDYDSVKSAIVG   76 (319)
Q Consensus         5 ~~~vlItGa-tG~iG~~l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~   76 (319)
                      ++||.|.|| +.+.+..++..++..    +-++..++.++...+...++.....   ..+.......   ..+..+++++
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~---~td~~~al~g   77 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL---TLDRRRALDG   77 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE---ESCHHHHHTT
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeee---cCCchhhcCC
Confidence            368999997 334555555554432    2478888877654333333322110   0111111112   2234667889


Q ss_pred             cceEEEecccCCCCCCC-Cc---------------c--chhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           77 CNGVFHIACPAPSTTVP-NP---------------Q--MELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        77 ~d~vi~~a~~~~~~~~~-~~---------------~--~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                      +|+||..|+......+. +.               +  .....-|+...+.+++.+.+.+...++..-|
T Consensus        78 aDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          78 ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            99999999864321000 00               0  0112357788888888888887665555433

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.65  E-value=0.021  Score=44.26  Aligned_cols=37  Identities=30%  Similarity=0.359  Sum_probs=33.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      ..++|+|.|| |..|...+.+|.++|++|+++.++..-
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence            4589999998 999999999999999999999887653

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.60  E-value=0.091  Score=35.65  Aligned_cols=73  Identities=14%  Similarity=0.168  Sum_probs=50.3

Q ss_pred             CCCeEEEeCcc----------hHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH
Q 020924            4 EKERVCVTGAG----------GFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         4 ~~~~vlItGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      ..++|||.|+.          -+-+.+.++.|.+.|++++.+.-|+......        ..-..-+...-...+.+...
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd--------~d~aD~lYfeplt~e~v~~I   74 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD--------YDTSDRLYFEPVTLEDVLEI   74 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS--------TTSSSEEECCCCSHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC--------hhhcCceEEccCCHHHHHHH
Confidence            45799999983          4789999999999999999998887754210        01122233444466777776


Q ss_pred             hc--CcceEEEec
Q 020924           74 IV--GCNGVFHIA   84 (319)
Q Consensus        74 ~~--~~d~vi~~a   84 (319)
                      ++  ++|.|+-..
T Consensus        75 i~~E~p~~ii~~~   87 (121)
T d1a9xa4          75 VRIEKPKGVIVQY   87 (121)
T ss_dssp             HHHHCCSEEECSS
T ss_pred             HHHhCCCEEEeeh
Confidence            64  688776543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.58  E-value=0.012  Score=47.20  Aligned_cols=33  Identities=21%  Similarity=0.130  Sum_probs=30.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +|+|.|| |..|..++..|.+.|++|.++.|++.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6999999 89999999999999999999998754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.52  E-value=0.014  Score=47.22  Aligned_cols=35  Identities=11%  Similarity=0.079  Sum_probs=31.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |..|+|.|| |+-|..+|++|+++|++|.++.++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            457999998 99999999999999999999988755

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.48  E-value=0.066  Score=36.82  Aligned_cols=74  Identities=15%  Similarity=0.168  Sum_probs=52.5

Q ss_pred             CCCeEEEeCc----------chHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHH
Q 020924            4 EKERVCVTGA----------GGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSA   73 (319)
Q Consensus         4 ~~~~vlItGa----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (319)
                      ..|+|||.|+          --+-+.+.+++|.+.|++++.+.-++.......        .-..-+...-...+.+.+.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~--------d~aD~lYfePlt~e~v~~I   77 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP--------EMADATYIEPIHWEVVRKI   77 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG--------GGSSEEECSCCCHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh--------hhcceeeeecCCHHHHHHH
Confidence            3489999998          457899999999999999999988877542111        1112333455567888887


Q ss_pred             hc--CcceEEEecc
Q 020924           74 IV--GCNGVFHIAC   85 (319)
Q Consensus        74 ~~--~~d~vi~~a~   85 (319)
                      ++  ++|.|+-..|
T Consensus        78 i~~E~pd~il~~~G   91 (127)
T d1a9xa3          78 IEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHCCSEEECSSS
T ss_pred             HHHhCcCCeEEEee
Confidence            75  7898876443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.45  E-value=0.018  Score=46.98  Aligned_cols=35  Identities=17%  Similarity=0.135  Sum_probs=31.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .|+|+|+|| |..|...+.+|.++|++|.++.++..
T Consensus        30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            479999998 99999999999999999999987654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.39  E-value=0.022  Score=42.12  Aligned_cols=36  Identities=14%  Similarity=0.081  Sum_probs=30.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      ++++|+|.|| |++|-.++..|.+.|.+|.++.+...
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            4578999988 99999999999999998777766543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.33  E-value=0.025  Score=46.43  Aligned_cols=36  Identities=25%  Similarity=0.200  Sum_probs=31.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD--YFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~   40 (319)
                      .+|+|+|+|| |.-|..++..|+++|  ++|+++.|+..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4579999998 999999999998876  69999998764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.23  E-value=0.024  Score=39.41  Aligned_cols=93  Identities=11%  Similarity=0.098  Sum_probs=58.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH-HCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc-CcceEEE
Q 020924            5 KERVCVTGAGGFLASWVVKLLL-SRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV-GCNGVFH   82 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi~   82 (319)
                      ..+|+|.|| |.+|+.+++++. +.|+++.++..+........+       .++.++.     .+.+....+ .++..+-
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I-------~Gi~V~~-----~~~l~~~~~~~i~iai~   69 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPV-------RGGVIEH-----VDLLPQRVPGRIEIALL   69 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE-------TTEEEEE-----GGGHHHHSTTTCCEEEE
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE-------CCEEEec-----HHHHHHHHhhcccEEEE
Confidence            458999988 999999999875 457898888765443211111       2455543     334555554 3444443


Q ss_pred             ecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEeccc
Q 020924           83 IACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSSG  128 (319)
Q Consensus        83 ~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS~  128 (319)
                      +..           .       .....+++.|.+.|++.+..++..
T Consensus        70 ~i~-----------~-------~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          70 TVP-----------R-------EAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             CSC-----------H-------HHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             eCC-----------H-------HHHHHHHHHHHHcCCCEEeecCce
Confidence            321           0       113457888888899988888763

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.14  E-value=0.022  Score=42.89  Aligned_cols=33  Identities=27%  Similarity=0.276  Sum_probs=27.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|.|.| .|++|..++..| ++|++|++++.++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~   33 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS   33 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence            5799997 599999999766 57999999987654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.12  E-value=0.061  Score=38.79  Aligned_cols=74  Identities=15%  Similarity=0.151  Sum_probs=40.5

Q ss_pred             CCCCCCeEEEeCcchHHHHHHH-HHHHHC-CCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh--c
Q 020924            1 MALEKERVCVTGAGGFLASWVV-KLLLSR-DYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI--V   75 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~-~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~   75 (319)
                      |+ ++.+|.|.| ||.+|+.+. +.|.+. ..+++++. |+.........++     .++.+..   .+.+++.+..  .
T Consensus         1 M~-kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~-----~~i~~~~---~~~d~l~~~~~~~   70 (157)
T d1nvmb1           1 MN-QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR-----MGVTTTY---AGVEGLIKLPEFA   70 (157)
T ss_dssp             CC-SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH-----TTCCEES---SHHHHHHHSGGGG
T ss_pred             CC-CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh-----cCCcccc---cceeeeeeccccc
Confidence            66 457899999 899998755 444443 45676664 5544322222222     1233321   1234444433  4


Q ss_pred             CcceEEEec
Q 020924           76 GCNGVFHIA   84 (319)
Q Consensus        76 ~~d~vi~~a   84 (319)
                      ++|+|+.+.
T Consensus        71 ~iDiVf~AT   79 (157)
T d1nvmb1          71 DIDFVFDAT   79 (157)
T ss_dssp             GEEEEEECS
T ss_pred             ccCEEEEcC
Confidence            689998753

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.90  E-value=0.12  Score=37.79  Aligned_cols=73  Identities=15%  Similarity=0.048  Sum_probs=44.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCe-EEEEccCCCh----hhHHHHh--c
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENL-KLFKADLLDY----DSVKSAI--V   75 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~----~~~~~~~--~   75 (319)
                      .+.+|+|.|+ |.+|...+..+...| .+|++++++++  +.+..+++     +. +++  |..+.    +......  .
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~--rl~~a~~~-----GAd~~i--n~~~~~~~~~~~~~~~~~~   97 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPD--KFEKAKVF-----GATDFV--NPNDHSEPISQVLSKMTNG   97 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG--GHHHHHHT-----TCCEEE--CGGGCSSCHHHHHHHHHTS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHH--HHHHHHHc-----CCcEEE--cCCCcchhHHHHHHhhccC
Confidence            4578999987 557777777777766 57888887765  33333333     22 333  32221    2333332  3


Q ss_pred             CcceEEEeccc
Q 020924           76 GCNGVFHIACP   86 (319)
Q Consensus        76 ~~d~vi~~a~~   86 (319)
                      ++|+++.++|.
T Consensus        98 G~d~vid~~G~  108 (175)
T d1cdoa2          98 GVDFSLECVGN  108 (175)
T ss_dssp             CBSEEEECSCC
T ss_pred             CcceeeeecCC
Confidence            68999999874

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.90  E-value=0.092  Score=36.69  Aligned_cols=30  Identities=27%  Similarity=0.340  Sum_probs=24.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHH-CCCeEEEEE
Q 020924            7 RVCVTGAGGFLASWVVKLLLS-RDYFVHGTA   36 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~-~g~~V~~~~   36 (319)
                      ||.|.|++|-.|+.+++.+.+ .++++.+..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            699999999999999998865 567776543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.78  E-value=0.034  Score=43.63  Aligned_cols=35  Identities=20%  Similarity=0.060  Sum_probs=31.6

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR   37 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (319)
                      ++++++|+|.|- |.+|+++++.|.+.|.+|++++-
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            478899999985 99999999999999999998764

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.78  E-value=0.068  Score=39.17  Aligned_cols=115  Identities=13%  Similarity=0.029  Sum_probs=64.8

Q ss_pred             CCeEEEeCcchHHHHH--HHHHHHHC----CCeEEEEEcCCChhhHHHH--Hhh-hccCCCeEEEEccCCChhhHHHHhc
Q 020924            5 KERVCVTGAGGFLASW--VVKLLLSR----DYFVHGTAREPSDEKNARL--YEL-EKASENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~--~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      .|||.|.|| |.+|..  ++..|+..    +.++..+++++........  ... ...+...++.     ...+..++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~-----~~td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE-----KTMNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE-----EeCChhhccc
Confidence            368999997 888765  34444432    4699999988664322111  111 1111222222     2234667889


Q ss_pred             CcceEEEecccCCCCC-------------CCCcc-----------chhhhhHHHHHHHHHHHHHhCCCCE-EEEe
Q 020924           76 GCNGVFHIACPAPSTT-------------VPNPQ-----------MELLEPAVKGTLNVVKACLEAKVKR-VIVV  125 (319)
Q Consensus        76 ~~d~vi~~a~~~~~~~-------------~~~~~-----------~~~~~~Nv~~~~~l~~~~~~~~~~~-iv~~  125 (319)
                      ++|+|+..++......             ...+.           .....-|+.....+++.+.+.+.+. +|++
T Consensus        76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~  150 (171)
T d1obba1          76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQA  150 (171)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEE
Confidence            9999999876432100             00000           0112358888889999998887654 4443

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.67  E-value=0.034  Score=43.00  Aligned_cols=33  Identities=21%  Similarity=0.180  Sum_probs=30.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      -|+|+|| |.-|...|.+|+++|++|.++.++..
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            3899987 99999999999999999999998764

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.53  E-value=0.039  Score=41.37  Aligned_cols=34  Identities=21%  Similarity=0.071  Sum_probs=28.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   40 (319)
                      |||+|.|| |++|..++..|.+.  +.+|+++.|...
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~~   36 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGDF   36 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence            58999998 99999999999875  578998887643

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=93.52  E-value=0.034  Score=44.13  Aligned_cols=32  Identities=19%  Similarity=-0.012  Sum_probs=29.4

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|.|| |..|..++.+|+++|++|+++.+...
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899988 99999999999999999999998643

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.046  Score=44.49  Aligned_cols=36  Identities=17%  Similarity=0.090  Sum_probs=31.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +..+|+|+|| |.-|...+.+|.++|++|+++-.+..
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~r   39 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARDR   39 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            3467999998 99999999999999999999976544

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.40  E-value=0.17  Score=38.94  Aligned_cols=35  Identities=20%  Similarity=0.204  Sum_probs=30.0

Q ss_pred             CCCCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEc
Q 020924            2 ALEKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTAR   37 (319)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r   37 (319)
                      ++++++|+|-|- |.+|+++++.|.+ .|..|++++-
T Consensus        28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeec
Confidence            567899999975 9999999999975 5999988773

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.30  E-value=0.07  Score=36.27  Aligned_cols=35  Identities=23%  Similarity=0.248  Sum_probs=28.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH---HCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLL---SRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~---~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |++|-.++..|.   .+|.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478999999 999999997665   45678999988654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.16  E-value=0.039  Score=44.37  Aligned_cols=32  Identities=22%  Similarity=0.480  Sum_probs=29.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREP   39 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (319)
                      +|+|+|| |.+|..++.+|+++|+ +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999998 9999999999999996 699999874

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.13  E-value=0.084  Score=35.81  Aligned_cols=35  Identities=17%  Similarity=0.195  Sum_probs=29.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHH---CCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLS---RDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |++|-.++..|.+   .|.+|+++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            379999998 9999999986654   5899999998654

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.00  E-value=0.0068  Score=47.16  Aligned_cols=26  Identities=31%  Similarity=0.263  Sum_probs=23.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFV   32 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V   32 (319)
                      |+|+|.|| |.+|..++.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            57999998 999999999999999764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.067  Score=37.55  Aligned_cols=35  Identities=23%  Similarity=0.167  Sum_probs=29.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH----HCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLL----SRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~----~~g~~V~~~~r~~~   40 (319)
                      .++++|.|| |++|-.++..|.    +.|.+|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            468999988 999999999885    35899999987654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=92.72  E-value=0.12  Score=36.20  Aligned_cols=35  Identities=23%  Similarity=0.220  Sum_probs=30.1

Q ss_pred             CCeEEEeCcc---hHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            5 KERVCVTGAG---GFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         5 ~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      -|+|.|.|+|   +-.|..+++.|.+.||+++.+.-++
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~   50 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRF   50 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecc
Confidence            4789999998   6799999999999999998876443

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.65  E-value=0.028  Score=41.58  Aligned_cols=31  Identities=29%  Similarity=0.171  Sum_probs=26.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR   37 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (319)
                      .+|+|.|| |++|-.++..|.+.|.++.++.+
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            56999997 99999999999998877665554

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.59  E-value=0.077  Score=41.69  Aligned_cols=34  Identities=15%  Similarity=0.024  Sum_probs=30.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   40 (319)
                      ++|+|.|| |.-|..++..|.+.|. +|.++.|.+.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            47999998 9999999999999995 8999988654

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.39  E-value=0.25  Score=42.96  Aligned_cols=33  Identities=15%  Similarity=0.117  Sum_probs=27.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDY-FVHGTARE   38 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (319)
                      ..+|+|.|+ |.+|.++++-|+..|. ++++++.+
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            468999998 7799999999999994 67777643

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.35  E-value=0.063  Score=38.81  Aligned_cols=31  Identities=29%  Similarity=0.334  Sum_probs=27.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      ||+|.|| |++|-.++..|. ++.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999998 999999999985 578999998754

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.22  E-value=0.48  Score=34.39  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=45.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccC-----------CChhhHHHH
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DYFVHGTAREPSDEKNARLYELEKASENLKLFKADL-----------LDYDSVKSA   73 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----------~~~~~~~~~   73 (319)
                      ++|.|-|- |-||+.+++.|.++ ..+|.++....+......+...     +...+..+-           .....+..+
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-----GIPVYAASEEFIPRFEKEGFEVAGTLNDL   76 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-----TCCEEESSGGGHHHHHHHTCCCSCBHHHH
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhc-----CceeecccccceeeecccCccccchhhhh
Confidence            58999986 99999999999865 4777776643332222222211     112222221           112244555


Q ss_pred             hcCcceEEEecccC
Q 020924           74 IVGCNGVFHIACPA   87 (319)
Q Consensus        74 ~~~~d~vi~~a~~~   87 (319)
                      +.++|+|+-|.|..
T Consensus        77 ~~~vDvViEcTG~f   90 (172)
T d2czca2          77 LEKVDIIVDATPGG   90 (172)
T ss_dssp             HTTCSEEEECCSTT
T ss_pred             hccCCEEEECCCCC
Confidence            67899999998753

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.17  E-value=0.47  Score=35.45  Aligned_cols=78  Identities=10%  Similarity=0.104  Sum_probs=44.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhh-HH---HHHhhhccCCCeEEEE-ccCCChhhHHHHhc-Ccce
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEK-NA---RLYELEKASENLKLFK-ADLLDYDSVKSAIV-GCNG   79 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~-~~d~   79 (319)
                      |||++.|. +..|..+++.|.+.|++|.++.-.+++.. ..   .+..... ..++.++. .++.+.+.++.+-+ ++|.
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~~~~~~~~~~~~~~~i~~~~~Dl   78 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPVYAPDNVNHPLWVERIAQLSPDV   78 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCEECCSCCCSHHHHHHHHHTCCSE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcceecccccchhhhhhhhhhcccc
Confidence            57888855 66899999999999999977653322110 00   0000000 02455554 45555544443332 6898


Q ss_pred             EEEecc
Q 020924           80 VFHIAC   85 (319)
Q Consensus        80 vi~~a~   85 (319)
                      +|.+..
T Consensus        79 ii~~g~   84 (203)
T d2blna2          79 IFSFYY   84 (203)
T ss_dssp             EEEESC
T ss_pred             eeeeec
Confidence            887653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.91  E-value=0.074  Score=41.36  Aligned_cols=33  Identities=24%  Similarity=0.113  Sum_probs=29.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-eEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDY-FVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   40 (319)
                      +|+|+|| |.-|...+.+|.++|+ +|+++.++..
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            6999998 9999999999999996 7999988654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.69  E-value=0.089  Score=42.31  Aligned_cols=34  Identities=26%  Similarity=0.229  Sum_probs=31.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      -.|+|+|| |+-|..++.+|.+.|.+|.++.+.+.
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            46999999 99999999999999999999998765

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.21  Score=39.75  Aligned_cols=27  Identities=19%  Similarity=0.073  Sum_probs=24.2

Q ss_pred             cchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924           13 AGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      .||-.|.+++++|+.+|++|+.+.+..
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            359999999999999999999998753

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.60  E-value=0.4  Score=34.80  Aligned_cols=77  Identities=16%  Similarity=0.157  Sum_probs=45.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEcc-----------CCChhhHHH
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPSDEKNARLYELEKASENLKLFKAD-----------LLDYDSVKS   72 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----------l~~~~~~~~   72 (319)
                      |++|.|-| .|-||+.+++.|..++ .+|.++....+......+...     +.......           +.-...+..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~v~g~~~~   74 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKK-----GYDLYVAIPERVKLFEKAGIEVAGTVDD   74 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHT-----TCCEEESSGGGHHHHHHTTCCCCEEHHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhc-----CCceEecccccceeecccCcccCCChhH
Confidence            57899997 5999999999998765 677776654332222222111     11111111           111123445


Q ss_pred             HhcCcceEEEecccC
Q 020924           73 AIVGCNGVFHIACPA   87 (319)
Q Consensus        73 ~~~~~d~vi~~a~~~   87 (319)
                      ++.++|+|+-|.|..
T Consensus        75 ~~~~vDvViEcTG~f   89 (171)
T d1cf2o1          75 MLDEADIVIDCTPEG   89 (171)
T ss_dssp             HHHTCSEEEECCSTT
T ss_pred             hhcCCCEEEEccCCC
Confidence            567899999998753

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.54  E-value=0.082  Score=35.29  Aligned_cols=37  Identities=19%  Similarity=0.003  Sum_probs=30.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++|+|+|.|+ |.-|.-++..|++.+.+|+...|+..
T Consensus        30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            57899999988 89999999999988777766666544

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=91.50  E-value=1.1  Score=32.16  Aligned_cols=33  Identities=24%  Similarity=0.216  Sum_probs=27.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      ++|.|=|- |-||+.+.+.|.+++.+|.++.-..
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd~~   33 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDLT   33 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCCEEEEECCCc
Confidence            47888866 9999999999999999998887543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.45  E-value=0.097  Score=42.57  Aligned_cols=32  Identities=25%  Similarity=0.183  Sum_probs=29.2

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|+|| |.-|...+.+|.++|++|+++.++..
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~~   33 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARDR   33 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            789988 99999999999999999999987654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.42  E-value=0.13  Score=36.85  Aligned_cols=35  Identities=26%  Similarity=0.014  Sum_probs=29.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCC
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~   40 (319)
                      +++|+|.|| |..|.-.+..+.+.|.+ |+++.|...
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            468999988 99999999999999864 778877643

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.12  E-value=0.13  Score=39.80  Aligned_cols=33  Identities=15%  Similarity=-0.065  Sum_probs=30.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      -|+|+|| |..|...+..|.++|++|.++.++..
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4999998 99999999999999999999998765

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.05  E-value=0.18  Score=38.96  Aligned_cols=35  Identities=14%  Similarity=0.252  Sum_probs=29.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLS-RDYFVHGTARE   38 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~   38 (319)
                      +++++|+|-|- |.+|+++++.|.+ .|..|+++.-.
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            67899999987 9999999999986 58999887643

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.02  E-value=0.11  Score=43.40  Aligned_cols=33  Identities=21%  Similarity=0.172  Sum_probs=29.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHH------CCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLS------RDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~------~g~~V~~~~r~~~   40 (319)
                      -|+|.|| |--|+..+..|++      +|++|.++.|...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            4999999 9999999999987      8999999998765

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.95  E-value=0.16  Score=38.47  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=51.5

Q ss_pred             CCeEEEeC-cchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTG-AGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +++||=.| |||..-+++++.. ..| +|++++.++...  ..+.+.....+++.++..|..++......+..+|+++|.
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i--~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~  132 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPF--EKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD  132 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHH--HHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred             CCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHH--HHHHHHhhccCCceEEEeeccCccccccccceEEEEEec
Confidence            57899888 5687778887655 455 899998765532  222222222358899999999887766666677888774

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=90.93  E-value=0.28  Score=35.98  Aligned_cols=105  Identities=12%  Similarity=0.043  Sum_probs=54.1

Q ss_pred             CCCCeEEEeCcchHHHHH-HHHHHHHCC--CeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--Cc
Q 020924            3 LEKERVCVTGAGGFLASW-VVKLLLSRD--YFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GC   77 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~-l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   77 (319)
                      |++.+|.|.|. |.+|+. .++.|.+.+  .+|.++.-... .......+..   + ...+.      .+++++++  ++
T Consensus         1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~-~~~~~~~~~~---~-~~~~~------~~~~ell~~~~i   68 (181)
T d1zh8a1           1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTR-SHAEEFAKMV---G-NPAVF------DSYEELLESGLV   68 (181)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSH-HHHHHHHHHH---S-SCEEE------SCHHHHHHSSCC
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccH-hhhhhhhccc---c-cccee------eeeecccccccc
Confidence            56678999985 999986 466776533  57776653222 2222222111   1 11111      23555564  57


Q ss_pred             ceEEEecccCCCCC-------CCCc--cchhhhhHHHHHHHHHHHHHhCCC
Q 020924           78 NGVFHIACPAPSTT-------VPNP--QMELLEPAVKGTLNVVKACLEAKV  119 (319)
Q Consensus        78 d~vi~~a~~~~~~~-------~~~~--~~~~~~~Nv~~~~~l~~~~~~~~~  119 (319)
                      |+|+-+........       ...+  .+.=+..|+.-...+.+.+++.+.
T Consensus        69 d~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~  119 (181)
T d1zh8a1          69 DAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEK  119 (181)
T ss_dssp             SEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSS
T ss_pred             ceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCC
Confidence            88886543221100       0000  011134566777778888887775

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.28  E-value=0.1  Score=40.67  Aligned_cols=35  Identities=14%  Similarity=0.006  Sum_probs=31.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      ..|+|+|| |--|...+.+|.++|++|.++.+++..
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            35999998 999999999999999999999987653

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.86  E-value=0.4  Score=36.66  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=50.3

Q ss_pred             CCeEEEeC-cchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTG-AGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +++||=.| |||+.-+++++. ... -.|++++.++..  ...+.+.....+++..+.+|..++.........+|.+++.
T Consensus        75 G~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~--i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~  150 (230)
T d1g8sa_          75 DSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRI--MRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED  150 (230)
T ss_dssp             TCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHH--HHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred             CCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHH--HHHHHHHHhhhcccceEEEeeccCcccccccceeEEeecc
Confidence            67899999 679999999985 333 499999977653  2222333233467888899998887665544445555553

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=89.58  E-value=0.32  Score=35.17  Aligned_cols=77  Identities=9%  Similarity=0.080  Sum_probs=43.4

Q ss_pred             CCeEEEeCcchHHHHH-HHHHHHHC-----CCeEEEEEcCCChhh--HHHHHhhhcc-CCCeEEEEccCCChhhHHHHhc
Q 020924            5 KERVCVTGAGGFLASW-VVKLLLSR-----DYFVHGTAREPSDEK--NARLYELEKA-SENLKLFKADLLDYDSVKSAIV   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   75 (319)
                      ..||.|.||.+ +|.. ++..|+.+     +-++..++.+++...  ...+...... ....+....     .+..++++
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            45899999844 4443 44455432     247888887765432  1222221111 122222221     24677889


Q ss_pred             CcceEEEecccC
Q 020924           76 GCNGVFHIACPA   87 (319)
Q Consensus        76 ~~d~vi~~a~~~   87 (319)
                      ++|+||..++..
T Consensus        77 ~AD~Vvitag~~   88 (167)
T d1u8xx1          77 DVDFVMAHIRVG   88 (167)
T ss_dssp             SCSEEEECCCTT
T ss_pred             CCCEEEECCCcC
Confidence            999999999864

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=89.40  E-value=0.17  Score=41.64  Aligned_cols=31  Identities=16%  Similarity=-0.012  Sum_probs=28.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTARE   38 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (319)
                      -|+|+|+ |+-|..++.+|.++|++|.++-+.
T Consensus         4 ~VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            3889977 999999999999999999999985

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.33  E-value=0.84  Score=34.01  Aligned_cols=31  Identities=19%  Similarity=0.149  Sum_probs=26.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEEc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTAR   37 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (319)
                      |||++.|. +..|..+++.|.++|++|.++.-
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEc
Confidence            57899966 67899999999999999987663

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.28  E-value=0.84  Score=33.20  Aligned_cols=100  Identities=19%  Similarity=0.199  Sum_probs=55.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhc--CcceEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR-DYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIV--GCNGVF   81 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   81 (319)
                      .+|.|.|+ |.+|+..++.|... +.+|+++. ++++  ......+....+...++       .++++++++  ++|+|+
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~~iD~v~   71 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLE--KAKAFATANNYPESTKI-------HGSYESLLEDPEIDALY   71 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHH--HHHHHHHHTTCCTTCEE-------ESSHHHHHHCTTCCEEE
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCcc--ccccchhccccccceee-------cCcHHHhhhccccceee
Confidence            58999985 88999999999764 67887664 3332  22222222111122222       123555553  578888


Q ss_pred             EecccCCCC-------------CCCCccchhhhhHHHHHHHHHHHHHhCCC
Q 020924           82 HIACPAPST-------------TVPNPQMELLEPAVKGTLNVVKACLEAKV  119 (319)
Q Consensus        82 ~~a~~~~~~-------------~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~  119 (319)
                      -+.......             ..+.|    ...|+.-...+.+.+++.++
T Consensus        72 I~tp~~~h~~~~~~~l~~g~~v~~EKP----~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          72 VPLPTSLHVEWAIKAAEKGKHILLEKP----VAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             ECCCGGGHHHHHHHHHTTTCEEEECSS----CSSSHHHHHHHHHHHHTTTC
T ss_pred             ecccchhhcchhhhhhhccceeecccc----cccCHHHHHHHHHHHHhhCC
Confidence            654321110             00122    23566777888888877765

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.08  E-value=0.11  Score=38.67  Aligned_cols=38  Identities=13%  Similarity=0.073  Sum_probs=32.4

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      |.-..++|+|.|| |..|...+..|.+.|.+|+++.+..
T Consensus         1 m~~~~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           1 LETHNTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             CEEEEEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             CCcccceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            4444578999998 9999999999999999999987654

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.49  E-value=0.76  Score=32.78  Aligned_cols=66  Identities=23%  Similarity=0.293  Sum_probs=37.7

Q ss_pred             CCeEEEeCcchHHHHH-HHHHHHH-CCCeEEEEE-cCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEE
Q 020924            5 KERVCVTGAGGFLASW-VVKLLLS-RDYFVHGTA-REPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVF   81 (319)
Q Consensus         5 ~~~vlItGatG~iG~~-l~~~L~~-~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   81 (319)
                      +++|.|.|. |.+|+. .+..|.. .+.+++++. +++... ....+..     ++     +..  +.++++.+++|+|+
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~-~~~~~~~-----~~-----~~~--~~~~~l~~~~D~V~   66 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPICESW-----RI-----PYA--DSLSSLAASCDAVF   66 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHHHHHH-----TC-----CBC--SSHHHHHTTCSEEE
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhh-hhhhhcc-----cc-----ccc--ccchhhhhhccccc
Confidence            358999985 899975 4666654 367877665 444322 2222221     11     222  23445567899987


Q ss_pred             Eec
Q 020924           82 HIA   84 (319)
Q Consensus        82 ~~a   84 (319)
                      -+.
T Consensus        67 I~t   69 (164)
T d1tlta1          67 VHS   69 (164)
T ss_dssp             ECS
T ss_pred             ccc
Confidence            653

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.64  E-value=0.17  Score=37.37  Aligned_cols=36  Identities=6%  Similarity=-0.048  Sum_probs=31.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +.+.|+|.|| |..|...+..|.+.|.+|+++.|...
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~~   39 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGMEK   39 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSST
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeecc
Confidence            3468999998 99999999999999999999987654

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=87.62  E-value=0.22  Score=40.37  Aligned_cols=32  Identities=22%  Similarity=0.250  Sum_probs=28.5

Q ss_pred             EEEeCcchHHHHHHHHHHH-----HCCCeEEEEEcCCC
Q 020924            8 VCVTGAGGFLASWVVKLLL-----SRDYFVHGTAREPS   40 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~   40 (319)
                      |+|.|| |..|..++..|+     +.|++|+++.|++.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            899999 999999999996     47999999998754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.55  E-value=0.26  Score=39.34  Aligned_cols=33  Identities=21%  Similarity=0.066  Sum_probs=29.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      -|+|+|| |..|...+.+|+++|.+|.++.+.+.
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~   50 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEPV   50 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            3899988 99999999999999999999987653

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.46  E-value=0.32  Score=39.23  Aligned_cols=33  Identities=18%  Similarity=0.252  Sum_probs=23.1

Q ss_pred             CeEEEeC-cc-hHH--HHHHHHHHHHCCCeEEEEEcC
Q 020924            6 ERVCVTG-AG-GFL--ASWVVKLLLSRDYFVHGTARE   38 (319)
Q Consensus         6 ~~vlItG-at-G~i--G~~l~~~L~~~g~~V~~~~r~   38 (319)
                      |||+|++ || |-+  +.+|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            5677765 44 333  335889999999999887743

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.44  E-value=0.11  Score=36.96  Aligned_cols=33  Identities=18%  Similarity=0.148  Sum_probs=21.1

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      |-+.| +|.+|+++++.|.+.++.+.+.+|++++
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~   34 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDR   34 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHH
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence            34565 4999999999886654445677777653

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=87.43  E-value=0.14  Score=37.82  Aligned_cols=36  Identities=11%  Similarity=0.082  Sum_probs=24.6

Q ss_pred             CCC-CCCeEEEeCcchHHH----HHHHHHHHHCCCeEEEEEc
Q 020924            1 MAL-EKERVCVTGAGGFLA----SWVVKLLLSRDYFVHGTAR   37 (319)
Q Consensus         1 m~~-~~~~vlItGatG~iG----~~l~~~L~~~g~~V~~~~r   37 (319)
                      |+| ++|+|+ .|.||-|+    -.+++.|.+.|++|.++.-
T Consensus         1 ms~l~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~eV~vv~T   41 (183)
T d1p3y1_           1 ISILKDKKLL-IGICGSISSVGISSYLLYFKSFFKEIRVVMT   41 (183)
T ss_dssp             CTTGGGCEEE-EEECSCGGGGGTHHHHHHHTTTSSEEEEEEC
T ss_pred             CCCcCCCEEE-EEEeCHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence            775 567755 45555443    3677788788999988763

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.20  E-value=0.33  Score=36.46  Aligned_cols=31  Identities=6%  Similarity=-0.175  Sum_probs=28.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      |+|+|| |+.|...+.++.+.|.+|.++.+..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            799998 9999999999999999999998764

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=86.79  E-value=0.33  Score=38.17  Aligned_cols=33  Identities=21%  Similarity=0.068  Sum_probs=29.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHH-CCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLS-RDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~   40 (319)
                      -|+|+|| |.-|...+.+|++ .|++|.++.+.+.
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            4999999 9999999999987 4999999998754

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.70  E-value=0.31  Score=36.98  Aligned_cols=34  Identities=21%  Similarity=0.339  Sum_probs=29.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSR--DYFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   40 (319)
                      .+|+|+|| |--|...+.+|.+.  |++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            48999988 99999999999764  799999988755

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.88  E-value=0.93  Score=30.81  Aligned_cols=37  Identities=22%  Similarity=0.089  Sum_probs=31.2

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      .++|+|+|.|+ |.-+-.-+..|.+-.-+|+++.|.+.
T Consensus        28 ~~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~   64 (126)
T d1fl2a2          28 FKGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPE   64 (126)
T ss_dssp             GBTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred             cCCceEEEEeC-CHHHHHHHHhhhccCCceEEEecccc
Confidence            46899999998 88888888899888889999998754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.80  E-value=0.97  Score=32.24  Aligned_cols=74  Identities=22%  Similarity=0.184  Sum_probs=41.4

Q ss_pred             CeEEEeCcchHHHHHHHH-HHHH-----CCCeEEEEEcCCChhhHHHHHhhhc--cCCCeEEEEccCCChhhHHHHhcCc
Q 020924            6 ERVCVTGAGGFLASWVVK-LLLS-----RDYFVHGTAREPSDEKNARLYELEK--ASENLKLFKADLLDYDSVKSAIVGC   77 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~-~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (319)
                      |||.|.|| |.+|...+- .|++     .+.++..++.++.+..  ....+..  .........   +  .+..+.++++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~--~~~d~~~~~~~~~~~~~~---t--~~~~~~l~~a   72 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQK--IVVDFVKRLVKDRFKVLI---S--DTFEGAVVDA   72 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHH--HHHHHHHHHHTTSSEEEE---C--SSHHHHHTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHH--HHHHHHHhhhccCceEEE---e--cCcccccCCC
Confidence            57999998 445555443 2322     1468999988765432  1111111  112223222   1  2345678899


Q ss_pred             ceEEEecccC
Q 020924           78 NGVFHIACPA   87 (319)
Q Consensus        78 d~vi~~a~~~   87 (319)
                      |+||..|+..
T Consensus        73 DvVVita~~~   82 (162)
T d1up7a1          73 KYVIFQFRPG   82 (162)
T ss_dssp             SEEEECCCTT
T ss_pred             CEEEEecccC
Confidence            9999998753

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.68  E-value=1  Score=34.12  Aligned_cols=76  Identities=17%  Similarity=0.184  Sum_probs=53.3

Q ss_pred             CCeEEEeC-cchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            5 KERVCVTG-AGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         5 ~~~vlItG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      +++||=.| |+|..-+++++.. ..+-.|++++.++...  ..+.......+.+..+..|..+++........+|+|++.
T Consensus        74 G~~VLDlGaGsG~~t~~la~~V-G~~G~V~aVD~s~~~l--~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d  150 (227)
T d1g8aa_          74 GKSVLYLGIASGTTASHVSDIV-GWEGKIFGIEFSPRVL--RELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED  150 (227)
T ss_dssp             TCEEEEETTTSTTHHHHHHHHH-CTTSEEEEEESCHHHH--HHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred             CCEEEEeccCCCHHHHHHHHHh-CCCCEEEEEeCcHHHH--HHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEE
Confidence            67888888 6799999998855 3457899999776532  222222222356888899998888776666678888774

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.64  E-value=1  Score=32.50  Aligned_cols=66  Identities=20%  Similarity=0.142  Sum_probs=49.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceEEEe
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGVFHI   83 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   83 (319)
                      ++|+|.|.|= |-.|.+=+.-|.+.|.+|++--|..++....+.+      .+++.        .++.++.+..|+|..+
T Consensus        15 k~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~------~Gf~v--------~~~~eA~~~aDiim~L   79 (182)
T d1np3a2          15 QGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEA------HGLKV--------ADVKTAVAAADVVMIL   79 (182)
T ss_dssp             HTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH------TTCEE--------ECHHHHHHTCSEEEEC
T ss_pred             CCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhh------hcccc--------ccHHHHhhhcCeeeee
Confidence            5789999976 9999999999999999999988876543221111      24443        4577888899999987


Q ss_pred             c
Q 020924           84 A   84 (319)
Q Consensus        84 a   84 (319)
                      .
T Consensus        80 ~   80 (182)
T d1np3a2          80 T   80 (182)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.51  E-value=0.27  Score=35.13  Aligned_cols=28  Identities=14%  Similarity=0.065  Sum_probs=25.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCeE
Q 020924            4 EKERVCVTGAGGFLASWVVKLLLSRDYFV   32 (319)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V   32 (319)
                      .+++|+|.|| |++|..++..|.+.|.++
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~~   55 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQPGEST   55 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCCSSCG
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHcCCcc
Confidence            4689999998 999999999999999654

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=85.33  E-value=0.36  Score=39.62  Aligned_cols=30  Identities=13%  Similarity=0.040  Sum_probs=27.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTARE   38 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (319)
                      |+|.|+ |+-|..++.+|.+.|++|.++-+.
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            889977 999999999999999999999874

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=85.33  E-value=0.42  Score=39.00  Aligned_cols=37  Identities=19%  Similarity=0.217  Sum_probs=30.7

Q ss_pred             CCCCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            1 MALEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      |+++ --|+|.|+ |.-|..++.+|++.|++|.++-+..
T Consensus         1 md~~-yDviIVGs-G~aG~v~A~~La~~G~kVlvLEaG~   37 (379)
T d2f5va1           1 MDIK-YDVVIVGS-GPIGCTYARELVGAGYKVAMFDIGE   37 (379)
T ss_dssp             CCSE-EEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCc-ccEEEECc-CHHHHHHHHHHhhCCCeEEEEecCC
Confidence            4532 24899987 9999999999999999999998753

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.00  E-value=0.74  Score=29.26  Aligned_cols=30  Identities=23%  Similarity=0.156  Sum_probs=25.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCeEEEEE
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYFVHGTA   36 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~   36 (319)
                      |||||.|+ |.=-.+++..|.+...+|++.-
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~p   30 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYP   30 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEec
Confidence            68999977 7778899999999889998874

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.95  E-value=0.42  Score=35.83  Aligned_cols=32  Identities=9%  Similarity=0.009  Sum_probs=29.1

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|+|| |..|...+.++.+.|.+|.++.++..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~~   37 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRGA   37 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            899998 99999999999999999999987643

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=84.58  E-value=0.46  Score=39.51  Aligned_cols=33  Identities=24%  Similarity=0.049  Sum_probs=25.0

Q ss_pred             CeEEEeCc------chHHH---HHHHHHHHHCCCeEEEEEcC
Q 020924            6 ERVCVTGA------GGFLA---SWVVKLLLSRDYFVHGTARE   38 (319)
Q Consensus         6 ~~vlItGa------tG~iG---~~l~~~L~~~g~~V~~~~r~   38 (319)
                      ||||+++.      +|++|   .+|+++|.++||+|+++...
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            57888653      46665   56799999999999998743

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=84.41  E-value=1.1  Score=36.47  Aligned_cols=96  Identities=15%  Similarity=0.111  Sum_probs=56.2

Q ss_pred             EeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChh-hHHHHhcCcceEEEecccCC
Q 020924           10 VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYD-SVKSAIVGCNGVFHIACPAP   88 (319)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~vi~~a~~~~   88 (319)
                      ..+|+|.+|..++    +++.+|+++.-+++.............-.+++++.+|..+.- ........+|+||--     
T Consensus       219 LycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilD-----  289 (358)
T d1uwva2         219 LFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD-----  289 (358)
T ss_dssp             ESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC-----
T ss_pred             ecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeC-----
Confidence            5578899998765    567899999877654322221111111257888988876532 111222346877652     


Q ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHhCCCCEEEEecc
Q 020924           89 STTVPNPQMELLEPAVKGTLNVVKACLEAKVKRVIVVSS  127 (319)
Q Consensus        89 ~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~~iv~~SS  127 (319)
                            |+..-.       ..+++...+.+.++|||+|-
T Consensus       290 ------PPR~G~-------~~~~~~l~~~~~~~ivYVSC  315 (358)
T d1uwva2         290 ------PARAGA-------AGVMQQIIKLEPIRIVYVSC  315 (358)
T ss_dssp             ------CCTTCC-------HHHHHHHHHHCCSEEEEEES
T ss_pred             ------CCCccH-------HHHHHHHHHcCCCEEEEEeC
Confidence                  111111       12455556668889999985

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=84.21  E-value=0.43  Score=38.43  Aligned_cols=32  Identities=13%  Similarity=0.025  Sum_probs=28.9

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            8 VCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |+|.|| |.-|...+.+++++|.+|+++...+.
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~~   39 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIPV   39 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            999987 99999999999999999999987543

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.93  E-value=0.76  Score=34.56  Aligned_cols=38  Identities=32%  Similarity=0.276  Sum_probs=31.1

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHH--------------------HCC-CeEEEEEcCCCh
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLL--------------------SRD-YFVHGTAREPSD   41 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~--------------------~~g-~~V~~~~r~~~~   41 (319)
                      +.+++|+|+|+ |.++.=+++.|+                    +.| .+|+++.|+...
T Consensus        37 ~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~~   95 (216)
T d1lqta1          37 LSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL   95 (216)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred             ccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECChH
Confidence            46799999988 999999999887                    455 569999987653

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.84  E-value=0.46  Score=38.10  Aligned_cols=33  Identities=18%  Similarity=0.037  Sum_probs=29.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      -|+|.|+ |.-|...+.+|+++|++|+++.+.+.
T Consensus        25 DVvVIG~-G~aGl~aA~~la~~G~~V~llEk~~~   57 (322)
T d1d4ca2          25 DVVIIGS-GGAGLAAAVSARDAGAKVILLEKEPI   57 (322)
T ss_dssp             SEEEECS-SHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3899988 99999999999999999999987654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.80  E-value=0.5  Score=33.52  Aligned_cols=33  Identities=18%  Similarity=0.049  Sum_probs=27.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCCh
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSD   41 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (319)
                      ||.+.|- |..|+.+++.|++.|+.+ +.+|+.++
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            6889977 999999999999999876 45666543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.67  E-value=0.65  Score=34.98  Aligned_cols=37  Identities=22%  Similarity=0.197  Sum_probs=32.9

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      +++|+|+|.|+ |--|.-+|..|++.+.+++.+.|...
T Consensus        30 ~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          30 FSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHhhhccccccccccc
Confidence            57899999977 88999999999999999998888765

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=83.45  E-value=1.4  Score=32.38  Aligned_cols=75  Identities=13%  Similarity=0.106  Sum_probs=51.2

Q ss_pred             EeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHh--cCcceEEEecccC
Q 020924           10 VTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAI--VGCNGVFHIACPA   87 (319)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi~~a~~~   87 (319)
                      +|-|+|....++++.+ . +.+|+++++++... ....+.+.....++.++.++..+...+..-+  ..+|.|+--.|..
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l-~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVL-RIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVS  106 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHH-HHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECSCC
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHH-HHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeeccchh
Confidence            5677888888888776 3 46899999986643 2222333334568999999888766555443  4689888766653

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=83.35  E-value=2.4  Score=31.38  Aligned_cols=79  Identities=18%  Similarity=0.195  Sum_probs=46.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCChhhH--H-----HHHhhhccCCCeEEEEccCCChhhHHHHhc--
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPSDEKN--A-----RLYELEKASENLKLFKADLLDYDSVKSAIV--   75 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (319)
                      .|||++.|. +..+..+++.|.+.|++|.++.-.+++...  .     ...... ...++.....+..+.+...+.++  
T Consensus         3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   80 (206)
T d1fmta2           3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLA-EEKGLPVFQPVSLRPQENQQLVAEL   80 (206)
T ss_dssp             CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHH-HHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred             CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhh-hccCccccccccccchhhHHHHhhh
Confidence            468999965 778889999999999998776543322100  0     000000 01244555555555555555555  


Q ss_pred             CcceEEEecc
Q 020924           76 GCNGVFHIAC   85 (319)
Q Consensus        76 ~~d~vi~~a~   85 (319)
                      ++|+++-+..
T Consensus        81 ~~d~~v~~~~   90 (206)
T d1fmta2          81 QADVMVVVAY   90 (206)
T ss_dssp             TCSEEEEESC
T ss_pred             cceEEEeecc
Confidence            5787776554

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.92  E-value=0.88  Score=34.47  Aligned_cols=37  Identities=24%  Similarity=0.255  Sum_probs=30.8

Q ss_pred             CCCCeEEEeCcchHHHHHHHHHHHHC--------------------C-CeEEEEEcCCC
Q 020924            3 LEKERVCVTGAGGFLASWVVKLLLSR--------------------D-YFVHGTAREPS   40 (319)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~--------------------g-~~V~~~~r~~~   40 (319)
                      +.+++|+|+|+ |.++.=+++.|++.                    | .+|+++.|+..
T Consensus        37 ~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          37 LSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             TTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             ccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            46799999988 99999999999873                    4 57888888765

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.62  E-value=0.64  Score=33.58  Aligned_cols=32  Identities=9%  Similarity=-0.033  Sum_probs=28.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREP   39 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (319)
                      -|+|.|| |..|...+.++.+.|.+|.++.++.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~~~   34 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGERF   34 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECSST
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEEec
Confidence            3899988 9999999999999999999998653

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.24  E-value=0.49  Score=35.83  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=30.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-------CeEEEEEcCCCh
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-------YFVHGTAREPSD   41 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~   41 (319)
                      .+|+|+|| |.-|...+.+|+++|       ++|+++.+.+..
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~   44 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP   44 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCCC
Confidence            58999988 999999999999887       579999987653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=81.92  E-value=7.6  Score=30.68  Aligned_cols=103  Identities=12%  Similarity=-0.031  Sum_probs=54.8

Q ss_pred             CCCeEEEeC-cchHHHHHHHHHHHHCCCeEEEEEcCCChhhHHHHHhhhccC-CCeEEEEccCCChhh-HHHHhcCcceE
Q 020924            4 EKERVCVTG-AGGFLASWVVKLLLSRDYFVHGTAREPSDEKNARLYELEKAS-ENLKLFKADLLDYDS-VKSAIVGCNGV   80 (319)
Q Consensus         4 ~~~~vlItG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~-~~~~~~~~d~v   80 (319)
                      ++++||=.+ +||..+.+++    ..+.+|++++.++..... ..++....+ .+++++.+|..+... +...-..+|.|
T Consensus       145 ~g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~-a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~V  219 (318)
T d1wxxa2         145 RGERALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRR-AEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV  219 (318)
T ss_dssp             CEEEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHH-HHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             CCCeeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHH-HHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence            456666544 6677766544    346789999987654321 112221111 468889888765322 22223468999


Q ss_pred             EEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhC
Q 020924           81 FHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEA  117 (319)
Q Consensus        81 i~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~  117 (319)
                      |.........    .  .....-......++..+.+.
T Consensus       220 i~DpP~~~~~----~--~~~~~~~~~~~~l~~~a~~l  250 (318)
T d1wxxa2         220 VLDPPAFAKG----K--KDVERAYRAYKEVNLRAIKL  250 (318)
T ss_dssp             EECCCCSCCS----T--TSHHHHHHHHHHHHHHHHHT
T ss_pred             EEcCCccccc----h--HHHHHHHHHHHHHHHHHHHH
Confidence            9875432221    1  11222233445566666554

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=81.70  E-value=6.9  Score=27.69  Aligned_cols=34  Identities=15%  Similarity=0.127  Sum_probs=26.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CeEEEEEcCCC
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-YFVHGTAREPS   40 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   40 (319)
                      ++|.|-|- |-||+.+.+.++++. .+|.++.-..+
T Consensus         2 ikigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~   36 (166)
T d1gado1           2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLD   36 (166)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSC
T ss_pred             eEEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCC
Confidence            47888875 999999999998874 77777765433

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.64  E-value=7.6  Score=28.15  Aligned_cols=31  Identities=19%  Similarity=0.191  Sum_probs=23.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-----CeEEEEEc
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRD-----YFVHGTAR   37 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r   37 (319)
                      ++|.|=|= |-||+.+.+++++++     .+|.++.-
T Consensus         3 ikigINGF-GRIGR~vlR~~~~~~~~~~~i~iv~Ind   38 (190)
T d1k3ta1           3 IKVGINGF-GRIGRMVFQALCEDGLLGTEIDVVAVVD   38 (190)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCBTTTEEEEEEEE
T ss_pred             eEEEEECC-ChHHHHHHHHHHHcCCCCCCeEEEEEec
Confidence            48999985 999999999998764     35555443

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.29  E-value=8.3  Score=28.40  Aligned_cols=97  Identities=15%  Similarity=0.131  Sum_probs=60.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChhhHHHHHhhhccCCCeEEEEccC-C-----------------
Q 020924            5 KERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKADL-L-----------------   65 (319)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~-----------------   65 (319)
                      ..+|.|.|. |.-|.+++.+|.+.|.+ |-.+.-+.+..   .+...   ....++..+.- +                 
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~---~L~~~---~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~   87 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQ---QLIRT---KADKKILIGKKLTRGLGAGGNPKIGEEAAK   87 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHH---HHHTS---CCSEEEECCTTTTTTBCCTTCHHHHHHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHH---HHhcC---CcchhcccccccccccccccchHHHHHHHH
Confidence            357999987 99999999999887642 44444344322   22222   11223333221 1                 


Q ss_pred             -ChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCCC
Q 020924           66 -DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKVK  120 (319)
Q Consensus        66 -~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~~  120 (319)
                       +.+.+.+.++++|.||-+||.....            .-.++..+.+.+++.+..
T Consensus        88 e~~~~I~~~l~~~d~vfi~AGlGGGT------------Gsgaapvia~~ake~g~l  131 (209)
T d2vapa1          88 ESAEEIKAAIQDSDMVFITCGLGGGT------------GTGSAPVVAEISKKIGAL  131 (209)
T ss_dssp             HTHHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHhccCCCEEEEEEeCCCCc------------cccHHHHHHHHHHHcCCc
Confidence             2356777888999999999976542            122345588899988863

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=81.04  E-value=8.1  Score=28.09  Aligned_cols=95  Identities=14%  Similarity=0.127  Sum_probs=59.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCe-EEEEEcCCChhhHHHHHhhhccCCCeEEEEcc-CC------------------
Q 020924            6 ERVCVTGAGGFLASWVVKLLLSRDYF-VHGTAREPSDEKNARLYELEKASENLKLFKAD-LL------------------   65 (319)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-l~------------------   65 (319)
                      +||.|.|. |.-|.+++.+|.+.|.+ |-.+.-+.+..   .+...   +...++..+. ++                  
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~---~L~~~---~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e   73 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQ---VLEAS---NADVKIQIGENITRGLGAGGRPEIGEQAALE   73 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHH---HHHTC---CCSEEEECCTTTTTTSCCTTCHHHHHHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHH---HHhcC---CcceEEecccccCCCcccccCchhhHhHHHH
Confidence            36889987 99999999999886632 43333334322   23222   1223333332 11                  


Q ss_pred             ChhhHHHHhcCcceEEEecccCCCCCCCCccchhhhhHHHHHHHHHHHHHhCCC
Q 020924           66 DYDSVKSAIVGCNGVFHIACPAPSTTVPNPQMELLEPAVKGTLNVVKACLEAKV  119 (319)
Q Consensus        66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~Nv~~~~~l~~~~~~~~~  119 (319)
                      +.+.+.+.+++.|.||-+||.....            .-.++-.+.+.|++.+.
T Consensus        74 ~~~~I~~~l~~~d~vfi~AGlGGgT------------GtgaapviA~~ake~g~  115 (194)
T d1w5fa1          74 SEEKIREVLQDTHMVFITAGFGGGT------------GTGASPVIAKIAKEMGI  115 (194)
T ss_dssp             THHHHHHHTTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhcCCCeEEEEEecCCCc------------ccchHHHHHHHHHHcCC
Confidence            3456777788999999999976542            22335568899999886

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.68  E-value=0.45  Score=37.13  Aligned_cols=35  Identities=14%  Similarity=0.138  Sum_probs=28.4

Q ss_pred             CCeEEEeCcchHHHH-----HHHHHHHHCCCeEEEEEcCCC
Q 020924            5 KERVCVTGAGGFLAS-----WVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         5 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      |++|.|+| -|++|+     +|+..|++.|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            57899997 677665     466688899999999998764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.31  E-value=2.8  Score=33.20  Aligned_cols=74  Identities=14%  Similarity=0.177  Sum_probs=45.4

Q ss_pred             CCCCeEEEeCc-chHHHHHHHHHHHHCCC-eEEEEEcCCChhhHHHHHhhhccCCCeEEEEccCCChhhHHHHhcCcceE
Q 020924            3 LEKERVCVTGA-GGFLASWVVKLLLSRDY-FVHGTAREPSDEKNARLYELEKASENLKLFKADLLDYDSVKSAIVGCNGV   80 (319)
Q Consensus         3 ~~~~~vlItGa-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   80 (319)
                      .++++||-.|+ ||.++.    .+++.|. +|++++.++................+++++.+|+.+...   -...+|+|
T Consensus        34 ~~~~~VLDiGcG~G~lsl----~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~---~~~~~D~I  106 (311)
T d2fyta1          34 FKDKVVLDVGCGTGILSM----FAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL---PVEKVDVI  106 (311)
T ss_dssp             TTTCEEEEETCTTSHHHH----HHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC---SCSCEEEE
T ss_pred             CCcCEEEEECCCCCHHHH----HHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC---ccccceEE
Confidence            36789999985 455544    4455674 799998765432222222222334679999999876431   12367988


Q ss_pred             EEe
Q 020924           81 FHI   83 (319)
Q Consensus        81 i~~   83 (319)
                      +..
T Consensus       107 vse  109 (311)
T d2fyta1         107 ISE  109 (311)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            864

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=80.11  E-value=0.65  Score=37.15  Aligned_cols=33  Identities=21%  Similarity=0.036  Sum_probs=29.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      -|+|.|+ |..|...+.++.++|.+|.++.+.+.
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~~   53 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKAPF   53 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3899988 99999999999999999999987643

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.08  E-value=1.1  Score=33.64  Aligned_cols=33  Identities=9%  Similarity=0.031  Sum_probs=29.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCeEEEEEcCCC
Q 020924            7 RVCVTGAGGFLASWVVKLLLSRDYFVHGTAREPS   40 (319)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (319)
                      -|+|+|| |--|...+.++++.|.+|.++.++..
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            3899988 99999999999999999999987544