Citrus Sinensis ID: 020933

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC
cccccccccccccccccccccccccccccccccECccccccccccccccccccEECccccccccEEEEEEcEEEEEccccccEEEEEEccccccEEEEcccEEEEcccccHHHHHcccccccccccccEEEEEcccccHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHccccccccEEEEEccHHHHHHHcccccccEEEEccccccccccccccHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHcccccEEccEEECccccccccEEEEEccccccccccccccccccccccHHHHccccccc
********************************************CISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSM**LHGHPFPIRIKWCMFLHSMPGC
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MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Spermidine synthase 1 confidentQ9SMB1
Spermidine synthase 2 probableO48661
Spermidine synthase 1 probableQ96556

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.16Spermidine synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1XJ5, chain A
Confidence level:very confident
Coverage over the Query: 47-288
View the alignment between query and template
View the model in PyMOL
Template: 3GJY, chain A
Confidence level:very confident
Coverage over the Query: 82-315
View the alignment between query and template
View the model in PyMOL