Citrus Sinensis ID: 020933

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC
cccccccccccccccccccccccccccccccccEEccccccccccccccccccEEEccccccccEEEEEEcEEEEEccccccEEEEEEccccccEEEEcccEEEEcccccHHHHHcccccccccccccEEEEEccccHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHccccccccEEEEEcHHHHHHHHcccccccEEEEccccccccccccccHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHcccccEEccEEEEccccccccEEEEEccccccccccccccccccccccHHHHccccccc
ccccccccccccccccccccccccccccccccEEcccccccccccccccccccEEccccccccEEEEEEccEEEEEEEccccEEEEEEEcccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHccccccEEEEEEccHHHHHHHHHHcHHHHcccccccEEEEEccHHHHHHHccccEEEEEEEccccccccccHHHcHHHHHHHHHHEEEEEEEEEEcccHHHcHHHHHHHHHHHHHHccccEEEEEEEcccccccEEEEEEEcccccccccccccHHHHHHHHHcHHHHHHHccc
maetgsaaatdlplkrprddgekeannnnngsvlmemdsnkqpdcissvipgwfseispmwpgeahsLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMIthlplcsipnpkkvlvigggdggvlrevsrhssvekidiceIDKMVVDVSkqffpdvavgfedprvtlhigdgvaflkavpegtydavivdssdpigpaqelfekpfFESVAKAlrpggvvstQAESIWLHMHIIEDIVANCRQIFKGsvnyawttvptyprtflpscsavnsdlspsmpslhghpfpirIKWCMFLHSMPGC
maetgsaaatdlplkrprddgekeannnnngsvLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHlplcsipnpKKVLVIGGGDGGVLrevsrhssvekidiceIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC
MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIgggdggVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC
********************************************CISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVN*********LHGHPFPIRIKWCMFLH*****
*************************************************IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSM*****HPFPIRIKWCMFLHSMPGC
**********DLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC
********************************************CISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC
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MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSAVNSDLSPSMPSLHGHPFPIRIKWCMFLHSMPGC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q9ZS45342 Spermidine synthase OS=So N/A no 0.827 0.771 0.846 1e-132
Q9ZTR1334 Spermidine synthase 1 OS= N/A no 0.818 0.781 0.855 1e-132
O82147316 Spermidine synthase OS=Co N/A no 0.752 0.759 0.933 1e-131
O48661340 Spermidine synthase 2 OS= yes no 0.849 0.797 0.804 1e-130
O48660314 Spermidine synthase OS=Ni N/A no 0.783 0.796 0.879 1e-130
Q96556308 Spermidine synthase 1 OS= N/A no 0.761 0.788 0.913 1e-130
O48658315 Spermidine synthase 1 OS= N/A no 0.796 0.806 0.864 1e-129
Q96557317 Spermidine synthase 2 OS= N/A no 0.749 0.753 0.907 1e-128
O48659308 Spermidine synthase 2 OS= N/A no 0.761 0.788 0.897 1e-128
Q9ZUB3334 Spermidine synthase 1 OS= no no 0.821 0.784 0.798 1e-127
>sp|Q9ZS45|SPDE_SOLLC Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1 Back     alignment and function desciption
 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/273 (84%), Positives = 249/273 (91%), Gaps = 9/273 (3%)

Query: 9   ATDLPLKRPRDDGEKEA----NNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGE 64
            T+LP+KRPR++  +      NN+NNG      +  +    ISSV+PGWFSEISP+WPGE
Sbjct: 11  GTELPVKRPREEEAETEMEAANNSNNGC-----EKEESSPYISSVLPGWFSEISPLWPGE 65

Query: 65  AHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSI 124
           AHSLKVEKILFQGKSDYQNV+VFQSSTYGKVL+LDGVIQLTERDECAYQEMITHLPLCSI
Sbjct: 66  AHSLKVEKILFQGKSDYQNVLVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSI 125

Query: 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTL 184
           PNPKKVLVIGGGDGGVLREVSRHSSVE+IDICEIDKMVV+V+KQFFPDVAVG+EDPRV L
Sbjct: 126 PNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKQFFPDVAVGYEDPRVNL 185

Query: 185 HIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244
           HIGDGVAFLK VP GTYDAVIVDSSDPIGPAQELFEKPFFES+AKALRPGGVVSTQAESI
Sbjct: 186 HIGDGVAFLKNVPAGTYDAVIVDSSDPIGPAQELFEKPFFESIAKALRPGGVVSTQAESI 245

Query: 245 WLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 277
           WLHMHIIE+IVANCRQIFKGSVNYAWTTVPTYP
Sbjct: 246 WLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYP 278

Solanum lycopersicum (taxid: 4081)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 6
>sp|Q9ZTR1|SPD1_PEA Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1 Back     alignment and function description
>sp|O82147|SPDE_COFAR Spermidine synthase OS=Coffea arabica PE=2 SV=1 Back     alignment and function description
>sp|O48661|SPD2_ARATH Spermidine synthase 2 OS=Arabidopsis thaliana GN=SPDSYN2 PE=1 SV=2 Back     alignment and function description
>sp|O48660|SPDE_NICSY Spermidine synthase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function description
>sp|Q96556|SPD1_DATST Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1 Back     alignment and function description
>sp|O48658|SPD1_HYONI Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1 Back     alignment and function description
>sp|Q96557|SPD2_DATST Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1 Back     alignment and function description
>sp|O48659|SPD2_HYONI Spermidine synthase 2 OS=Hyoscyamus niger PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUB3|SPD1_ARATH Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
224111294335 predicted protein [Populus trichocarpa] 0.849 0.808 0.866 1e-135
357433153335 spermidine synthase [Populus tomentosa] 0.849 0.808 0.859 1e-135
357485917343 Spermidine synthase [Medicago truncatula 0.836 0.778 0.869 1e-134
336088579335 spermidine synthase [Malus x domestica] 0.865 0.823 0.826 1e-133
224099715335 predicted protein [Populus trichocarpa] 0.824 0.785 0.880 1e-133
369726491344 spermidine synthase [Medicago sativa] 0.840 0.779 0.869 1e-133
359806591338 uncharacterized protein LOC100790506 [Gl 0.862 0.813 0.848 1e-133
255587587346 spermidine synthase 1, putative [Ricinus 0.868 0.800 0.816 1e-132
358248320340 uncharacterized protein LOC100792107 [Gl 0.868 0.814 0.844 1e-132
126153731328 spermidine synthase [Lotus japonicus] 0.824 0.801 0.858 1e-131
>gi|224111294|ref|XP_002315806.1| predicted protein [Populus trichocarpa] gi|222864846|gb|EEF01977.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/277 (86%), Positives = 255/277 (92%), Gaps = 6/277 (2%)

Query: 1   MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPM 60
           MAE   +  TDLP+KRPR+D   E N  +  +  ME ++N   D ISSVI GWFSEISPM
Sbjct: 1   MAE--ESVVTDLPVKRPRED---EENGASAATEAMETETNNN-DYISSVITGWFSEISPM 54

Query: 61  WPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLP 120
           WPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVL+LDGVIQLTERDECAYQEMITHLP
Sbjct: 55  WPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLP 114

Query: 121 LCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDP 180
           LCSI NPKKVLVIGGGDGGVLREV+RHSSVE+IDICEIDKMVVDVSK+FFPDV+VG+EDP
Sbjct: 115 LCSIANPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVSKKFFPDVSVGYEDP 174

Query: 181 RVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240
           RV+LHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ
Sbjct: 175 RVSLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 234

Query: 241 AESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 277
           AESIWLHM+IIEDIVANCRQIFKGSVNYAWTTVPTYP
Sbjct: 235 AESIWLHMNIIEDIVANCRQIFKGSVNYAWTTVPTYP 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357433153|gb|AET79382.1| spermidine synthase [Populus tomentosa] Back     alignment and taxonomy information
>gi|357485917|ref|XP_003613246.1| Spermidine synthase [Medicago truncatula] gi|355514581|gb|AES96204.1| Spermidine synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|336088579|dbj|BAC20170.2| spermidine synthase [Malus x domestica] Back     alignment and taxonomy information
>gi|224099715|ref|XP_002311589.1| predicted protein [Populus trichocarpa] gi|222851409|gb|EEE88956.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|369726491|gb|AEX20346.1| spermidine synthase [Medicago sativa] Back     alignment and taxonomy information
>gi|359806591|ref|NP_001241525.1| uncharacterized protein LOC100790506 [Glycine max] gi|255635947|gb|ACU18320.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255587587|ref|XP_002534321.1| spermidine synthase 1, putative [Ricinus communis] gi|223525495|gb|EEF28057.1| spermidine synthase 1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|358248320|ref|NP_001239861.1| uncharacterized protein LOC100792107 [Glycine max] gi|255641867|gb|ACU21202.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|126153731|emb|CAM35497.1| spermidine synthase [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
TAIR|locus:2016129340 SPDS2 "spermidine synthase 2" 0.849 0.797 0.782 6.4e-115
POMBASE|SPBC12C2.07c298 SPBC12C2.07c "spermidine synth 0.702 0.751 0.548 1.1e-66
DICTYBASE|DDB_G0268630284 spsA "Spermidine synthase" [Di 0.702 0.788 0.535 7.4e-66
ASPGD|ASPL0000062169292 spdA [Emericella nidulans (tax 0.746 0.815 0.522 2.5e-65
CGD|CAL0006284297 SPE3 [Candida albicans (taxid: 0.702 0.754 0.537 9.7e-64
SGD|S000006273293 SPE3 "Spermidine synthase" [Sa 0.714 0.778 0.523 5.4e-63
GENEDB_PFALCIPARUM|PF11_0301321 PF11_0301 "spermidine synthase 0.780 0.775 0.486 8.8e-63
UNIPROTKB|Q8II73321 PF11_0301 "Spermidine synthase 0.780 0.775 0.486 8.8e-63
RGD|620796302 Srm "spermidine synthase" [Rat 0.717 0.758 0.489 9e-61
MGI|MGI:102690302 Srm "spermidine synthase" [Mus 0.717 0.758 0.489 1.2e-60
TAIR|locus:2016129 SPDS2 "spermidine synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
 Identities = 220/281 (78%), Positives = 244/281 (86%)

Query:     1 MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSN----KQPDCISSVIPGWFSE 56
             M+ T  A+ TDLP+KRPR     EA  +NNG   ME ++     K+P C+SS+IPGWFSE
Sbjct:     1 MSSTQEASVTDLPVKRPR-----EAEEDNNGGA-METENGGGEIKEPSCMSSIIPGWFSE 54

Query:    57 ISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMI 116
             ISPMWPGEAHSLKVEKILFQGKSDYQ+V+VFQS+TYGKVL+LDGVIQLTERDECAYQEMI
Sbjct:    55 ISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMI 114

Query:   117 THLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG 176
             THLPLCSI NPKKVLVI      VLREV+RHSSVE+IDICEIDKMVVDV+KQ+FP+VAVG
Sbjct:   115 THLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVAVG 174

Query:   177 FEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGV 236
             +EDPRV L IGDGVAFLK   EGTYDAVIVDSSDPIGPA+ELFEKPFFESV +ALRPGGV
Sbjct:   175 YEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGPAKELFEKPFFESVNRALRPGGV 234

Query:   237 VSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 277
             V TQAES+WLHM IIEDIV+NCR IFKGSVNYAWT+VPTYP
Sbjct:   235 VCTQAESLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYP 275
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0004766 "spermidine synthase activity" evidence=IDA
GO:0008295 "spermidine biosynthetic process" evidence=RCA;IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005886 "plasma membrane" evidence=IDA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009069 "serine family amino acid metabolic process" evidence=RCA
GO:0009616 "virus induced gene silencing" evidence=RCA
GO:0010050 "vegetative phase change" evidence=RCA
GO:0042545 "cell wall modification" evidence=RCA
POMBASE|SPBC12C2.07c SPBC12C2.07c "spermidine synthase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268630 spsA "Spermidine synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000062169 spdA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0006284 SPE3 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
SGD|S000006273 SPE3 "Spermidine synthase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF11_0301 PF11_0301 "spermidine synthase" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8II73 PF11_0301 "Spermidine synthase" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
RGD|620796 Srm "spermidine synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:102690 Srm "spermidine synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96556SPD1_DATST2, ., 5, ., 1, ., 1, 60.91350.76170.7889N/Ano
Q96557SPD2_DATST2, ., 5, ., 1, ., 1, 60.90790.74920.7539N/Ano
Q9ZS45SPDE_SOLLC2, ., 5, ., 1, ., 1, 60.84610.82750.7719N/Ano
Q64674SPEE_MOUSE2, ., 5, ., 1, ., 1, 60.51510.71780.7582yesno
O48658SPD1_HYONI2, ., 5, ., 1, ., 1, 60.86430.79620.8063N/Ano
O48659SPD2_HYONI2, ., 5, ., 1, ., 1, 60.89710.76170.7889N/Ano
Q09741SPEE_SCHPO2, ., 5, ., 1, ., 1, 60.57520.70210.7516yesno
Q9XY92SPEE_DICDI2, ., 5, ., 1, ., 1, 60.56190.70210.7887yesno
Q9SMB1SPD1_ORYSJ2, ., 5, ., 1, ., 1, 60.93100.72720.7182yesno
O48661SPD2_ARATH2, ., 5, ., 1, ., 1, 60.80420.84950.7970yesno
O48660SPDE_NICSY2, ., 5, ., 1, ., 1, 60.87930.78360.7961N/Ano
Q9ZTR0SPD2_PEA2, ., 5, ., 1, ., 1, 60.83140.82440.7690N/Ano
O82147SPDE_COFAR2, ., 5, ., 1, ., 1, 60.93330.75230.7594N/Ano
P19623SPEE_HUMAN2, ., 5, ., 1, ., 1, 60.51510.71780.7582yesno
Q12074SPEE_YEAST2, ., 5, ., 1, ., 1, 60.54970.71470.7781yesno
Q9ZTR1SPD1_PEA2, ., 5, ., 1, ., 1, 60.85500.81810.7814N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.5.1.22LOW CONFIDENCE prediction!
4th Layer2.5.1.160.979
3rd Layer2.5.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_X0357
spermidine synthase (335 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.00101272
S-adenosylmethionine decarboxylase (EC-4.1.1.50) (355 aa)
     •• 0.913
gw1.123.86.1
SubName- Full=Putative uncharacterized protein; (357 aa)
     •• 0.913
gw1.IV.4194.1
SubName- Full=Putative uncharacterized protein; (357 aa)
     •• 0.912
gw1.XVIII.3078.1
S-adenosylmethionine decarboxylase (EC-4.1.1.50) (348 aa)
     •• 0.908
gw1.VIII.2435.1
S-adenosylmethionine decarboxylase (EC-4.1.1.50) (303 aa)
     •• 0.908
fgenesh4_pg.C_LG_II000144
hypothetical protein (381 aa)
•    •• 0.907
estExt_fgenesh4_pg.C_LG_IV1398
SubName- Full=Putative uncharacterized protein; (263 aa)
     •• 0.900
estExt_fgenesh4_kg.C_LG_IX0009
5'-methylthioadenosine nucleosidase (EC-3.2.2.16) (263 aa)
     •• 0.900
gw1.V.1952.1
annotation not avaliable (202 aa)
     •  0.899
ACS3
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (467 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
PLN02366308 PLN02366, PLN02366, spermidine synthase 0.0
pfam01564240 pfam01564, Spermine_synth, Spermine/spermidine syn 1e-123
PRK00811283 PRK00811, PRK00811, spermidine synthase; Provision 1e-107
TIGR00417271 TIGR00417, speE, spermidine synthase 4e-95
COG0421282 COG0421, SpeE, Spermidine synthase [Amino acid tra 8e-92
PLN02823336 PLN02823, PLN02823, spermine synthase 2e-54
PRK03612521 PRK03612, PRK03612, spermidine synthase; Provision 1e-31
COG4262508 COG4262, COG4262, Predicted spermidine synthase wi 4e-29
PRK01581374 PRK01581, speE, spermidine synthase; Validated 8e-28
PRK04457262 PRK04457, PRK04457, spermidine synthase; Provision 2e-12
cd02440107 cd02440, AdoMet_MTases, S-adenosylmethionine-depen 1e-11
pfam13659117 pfam13659, Methyltransf_26, Methyltransferase doma 3e-10
PRK00536262 PRK00536, speE, spermidine synthase; Provisional 2e-08
pfam12847104 pfam12847, Methyltransf_18, Methyltransferase doma 2e-05
COG4122219 COG4122, COG4122, Predicted O-methyltransferase [G 4e-05
pfam05430124 pfam05430, Methyltransf_30, S-adenosyl-L-methionin 3e-04
pfam13578105 pfam13578, Methyltransf_24, Methyltransferase doma 0.001
pfam00891239 pfam00891, Methyltransf_2, O-methyltransferase 0.002
pfam0824298 pfam08242, Methyltransf_12, Methyltransferase doma 0.003
pfam05175170 pfam05175, MTS, Methyltransferase small domain 0.003
>gnl|CDD|215208 PLN02366, PLN02366, spermidine synthase Back     alignment and domain information 
 Score =  527 bits (1360), Expect = 0.0
 Identities = 200/241 (82%), Positives = 225/241 (93%)

Query: 38  DSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLI 97
               +  C S+VIPGWFSEISPMWPGEAHSLKVEK+LFQGKSD+Q+V+VF+S+TYGKVL+
Sbjct: 3   APESEAKCHSTVIPGWFSEISPMWPGEAHSLKVEKVLFQGKSDFQDVLVFESATYGKVLV 62

Query: 98  LDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICE 157
           LDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLV+GGGDGGVLRE++RHSSVE+IDICE
Sbjct: 63  LDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVVGGGDGGVLREIARHSSVEQIDICE 122

Query: 158 IDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQE 217
           IDKMV+DVSK+FFPD+AVGF+DPRV LHIGDGV FLK  PEGTYDA+IVDSSDP+GPAQE
Sbjct: 123 IDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDAIIVDSSDPVGPAQE 182

Query: 218 LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 277
           LFEKPFFESVA+ALRPGGVV TQAES+WLHM +IED++A CR+ FKGSVNYAWTTVPTYP
Sbjct: 183 LFEKPFFESVARALRPGGVVCTQAESMWLHMDLIEDLIAICRETFKGSVNYAWTTVPTYP 242

Query: 278 R 278
            
Sbjct: 243 S 243

Length = 308
>gnl|CDD|216573 pfam01564, Spermine_synth, Spermine/spermidine synthase Back     alignment and domain information
>gnl|CDD|234843 PRK00811, PRK00811, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|188048 TIGR00417, speE, spermidine synthase Back     alignment and domain information
>gnl|CDD|223498 COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|178418 PLN02823, PLN02823, spermine synthase Back     alignment and domain information
>gnl|CDD|235139 PRK03612, PRK03612, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|226713 COG4262, COG4262, Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|234961 PRK01581, speE, spermidine synthase; Validated Back     alignment and domain information
>gnl|CDD|179854 PRK04457, PRK04457, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|100107 cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) Back     alignment and domain information
>gnl|CDD|222295 pfam13659, Methyltransf_26, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|134311 PRK00536, speE, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|221804 pfam12847, Methyltransf_18, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|226607 COG4122, COG4122, Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|203249 pfam05430, Methyltransf_30, S-adenosyl-L-methionine-dependent methyltransferase Back     alignment and domain information
>gnl|CDD|222236 pfam13578, Methyltransf_24, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|216177 pfam00891, Methyltransf_2, O-methyltransferase Back     alignment and domain information
>gnl|CDD|219760 pfam08242, Methyltransf_12, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|203189 pfam05175, MTS, Methyltransferase small domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
PLN02366308 spermidine synthase 100.0
KOG1562337 consensus Spermidine synthase [Amino acid transpor 100.0
PF01564246 Spermine_synth: Spermine/spermidine synthase; Inte 100.0
PRK00536262 speE spermidine synthase; Provisional 100.0
COG0421282 SpeE Spermidine synthase [Amino acid transport and 100.0
PRK00811283 spermidine synthase; Provisional 100.0
PLN02823336 spermine synthase 100.0
TIGR00417270 speE spermidine synthase. the SpeE subunit of sper 100.0
PRK01581374 speE spermidine synthase; Validated 100.0
PRK03612521 spermidine synthase; Provisional 100.0
COG4262508 Predicted spermidine synthase with an N-terminal m 100.0
PRK04457262 spermidine synthase; Provisional 99.94
COG2521287 Predicted archaeal methyltransferase [General func 99.7
PF12847112 Methyltransf_18: Methyltransferase domain; PDB: 3G 99.66
COG4123248 Predicted O-methyltransferase [General function pr 99.6
PF13659117 Methyltransf_26: Methyltransferase domain; PDB: 3G 99.57
PF01209233 Ubie_methyltran: ubiE/COQ5 methyltransferase famil 99.55
PF05175170 MTS: Methyltransferase small domain; InterPro: IPR 99.54
TIGR00091194 tRNA (guanine-N(7)-)-methyltransferase. In E. coli 99.54
PRK00121202 trmB tRNA (guanine-N(7)-)-methyltransferase; Revie 99.54
COG2226238 UbiE Methylase involved in ubiquinone/menaquinone 99.5
TIGR00138181 gidB 16S rRNA methyltransferase GidB. GidB (glucos 99.48
PRK14966423 unknown domain/N5-glutamine S-adenosyl-L-methionin 99.47
PRK15001378 SAM-dependent 23S ribosomal RNA mG1835 methyltrans 99.47
TIGR02469124 CbiT precorrin-6Y C5,15-methyltransferase (decarbo 99.46
PF13847152 Methyltransf_31: Methyltransferase domain; PDB: 3T 99.45
COG2813300 RsmC 16S RNA G1207 methylase RsmC [Translation, ri 99.44
COG4122219 Predicted O-methyltransferase [General function pr 99.44
PRK00107187 gidB 16S rRNA methyltransferase GidB; Reviewed 99.44
TIGR03533284 L3_gln_methyl protein-(glutamine-N5) methyltransfe 99.44
PRK14121390 tRNA (guanine-N(7)-)-methyltransferase; Provisiona 99.43
TIGR03704251 PrmC_rel_meth putative protein-(glutamine-N5) meth 99.43
PF01596205 Methyltransf_3: O-methyltransferase; InterPro: IPR 99.43
PRK15128396 23S rRNA m(5)C1962 methyltransferase; Provisional 99.43
PF0824195 Methyltransf_11: Methyltransferase domain; InterPr 99.42
PRK08287187 cobalt-precorrin-6Y C(15)-methyltransferase; Valid 99.42
PRK15451247 tRNA cmo(5)U34 methyltransferase; Provisional 99.42
PLN02781234 Probable caffeoyl-CoA O-methyltransferase 99.41
PRK01544 506 bifunctional N5-glutamine S-adenosyl-L-methionine- 99.41
COG4106257 Tam Trans-aconitate methyltransferase [General fun 99.4
PRK11805307 N5-glutamine S-adenosyl-L-methionine-dependent met 99.4
PRK01683258 trans-aconitate 2-methyltransferase; Provisional 99.4
PRK00377198 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; 99.39
TIGR00536284 hemK_fam HemK family putative methylases. The gene 99.39
PLN02476278 O-methyltransferase 99.39
COG2242187 CobL Precorrin-6B methylase 2 [Coenzyme metabolism 99.38
PRK14103255 trans-aconitate 2-methyltransferase; Provisional 99.38
PRK11036255 putative S-adenosyl-L-methionine-dependent methylt 99.38
COG1092393 Predicted SAM-dependent methyltransferases [Genera 99.37
TIGR03534251 RF_mod_PrmC protein-(glutamine-N5) methyltransfera 99.37
COG2230283 Cfa Cyclopropane fatty acid synthase and related m 99.37
PF13649101 Methyltransf_25: Methyltransferase domain; PDB: 3B 99.37
COG2227243 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- 99.36
TIGR02752231 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me 99.36
PRK11207197 tellurite resistance protein TehB; Provisional 99.36
PRK07402196 precorrin-6B methylase; Provisional 99.36
PF02353273 CMAS: Mycolic acid cyclopropane synthetase; InterP 99.36
PRK09489342 rsmC 16S ribosomal RNA m2G1207 methyltransferase; 99.36
PLN02233261 ubiquinone biosynthesis methyltransferase 99.35
PRK04266226 fibrillarin; Provisional 99.35
PF02390195 Methyltransf_4: Putative methyltransferase ; Inter 99.35
PF0824299 Methyltransf_12: Methyltransferase domain; InterPr 99.34
TIGR00740239 methyltransferase, putative. A simple BLAST search 99.34
TIGR00537179 hemK_rel_arch HemK-related putative methylase. The 99.33
TIGR00080215 pimt protein-L-isoaspartate(D-aspartate) O-methylt 99.33
PLN02396322 hexaprenyldihydroxybenzoate methyltransferase 99.32
PRK14967223 putative methyltransferase; Provisional 99.32
PLN02589247 caffeoyl-CoA O-methyltransferase 99.32
PRK09328275 N5-glutamine S-adenosyl-L-methionine-dependent met 99.31
PLN02244340 tocopherol O-methyltransferase 99.31
PRK10909199 rsmD 16S rRNA m(2)G966-methyltransferase; Provisio 99.31
COG2519256 GCD14 tRNA(1-methyladenosine) methyltransferase an 99.31
PRK13942212 protein-L-isoaspartate O-methyltransferase; Provis 99.31
KOG1540296 consensus Ubiquinone biosynthesis methyltransferas 99.3
PRK13944205 protein-L-isoaspartate O-methyltransferase; Provis 99.3
smart00828224 PKS_MT Methyltransferase in polyketide synthase (P 99.29
PRK11783702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 99.29
TIGR00477195 tehB tellurite resistance protein TehB. Part of a 99.28
COG0220227 Predicted S-adenosylmethionine-dependent methyltra 99.28
COG2890280 HemK Methylase of polypeptide chain release factor 99.28
TIGR02072240 BioC biotin biosynthesis protein BioC. This enzyme 99.28
COG2518209 Pcm Protein-L-isoaspartate carboxylmethyltransfera 99.27
PF05401201 NodS: Nodulation protein S (NodS); InterPro: IPR00 99.27
TIGR00406288 prmA ribosomal protein L11 methyltransferase. Ribo 99.27
PTZ00098263 phosphoethanolamine N-methyltransferase; Provision 99.26
PRK11188209 rrmJ 23S rRNA methyltransferase J; Provisional 99.25
PLN03075296 nicotianamine synthase; Provisional 99.25
PF10672286 Methyltrans_SAM: S-adenosylmethionine-dependent me 99.25
PRK10258251 biotin biosynthesis protein BioC; Provisional 99.23
PRK14968188 putative methyltransferase; Provisional 99.22
KOG1270282 consensus Methyltransferases [Coenzyme transport a 99.22
PRK11873272 arsM arsenite S-adenosylmethyltransferase; Reviewe 99.22
PF01135209 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl 99.21
TIGR00438188 rrmJ cell division protein FtsJ. 99.21
PRK06922677 hypothetical protein; Provisional 99.19
PRK12335287 tellurite resistance protein TehB; Provisional 99.19
PRK00517250 prmA ribosomal protein L11 methyltransferase; Revi 99.18
PLN02336475 phosphoethanolamine N-methyltransferase 99.18
KOG2352482 consensus Predicted spermine/spermidine synthase [ 99.18
PHA03411279 putative methyltransferase; Provisional 99.17
TIGR00446264 nop2p NOL1/NOP2/sun family putative RNA methylase. 99.17
PRK10901427 16S rRNA methyltransferase B; Provisional 99.17
PRK14903431 16S rRNA methyltransferase B; Provisional 99.16
PLN02490340 MPBQ/MSBQ methyltransferase 99.16
PRK14902444 16S rRNA methyltransferase B; Provisional 99.15
PF08704247 GCD14: tRNA methyltransferase complex GCD14 subuni 99.15
TIGR01177329 conserved hypothetical protein TIGR01177. This fam 99.14
PRK08317241 hypothetical protein; Provisional 99.14
PRK11705383 cyclopropane fatty acyl phospholipid synthase; Pro 99.14
PRK00312212 pcm protein-L-isoaspartate O-methyltransferase; Re 99.14
PF06325295 PrmA: Ribosomal protein L11 methyltransferase (Prm 99.13
PRK11088272 rrmA 23S rRNA methyltransferase A; Provisional 99.13
TIGR00452314 methyltransferase, putative. Known examples to dat 99.13
KOG2904328 consensus Predicted methyltransferase [General fun 99.12
PLN02672 1082 methionine S-methyltransferase 99.12
PTZ00146293 fibrillarin; Provisional 99.11
cd02440107 AdoMet_MTases S-adenosylmethionine-dependent methy 99.11
TIGR00563426 rsmB ribosomal RNA small subunit methyltransferase 99.11
TIGR03587204 Pse_Me-ase pseudaminic acid biosynthesis-associate 99.11
PRK15068322 tRNA mo(5)U34 methyltransferase; Provisional 99.1
PRK14904445 16S rRNA methyltransferase B; Provisional 99.1
COG2264300 PrmA Ribosomal protein L11 methylase [Translation, 99.1
TIGR00095189 RNA methyltransferase, RsmD family. This model rep 99.1
PHA03412241 putative methyltransferase; Provisional 99.1
TIGR02716306 C20_methyl_CrtF C-20 methyltransferase BchU. Membe 99.1
PRK13943322 protein-L-isoaspartate O-methyltransferase; Provis 99.1
PRK14901434 16S rRNA methyltransferase B; Provisional 99.09
smart00650169 rADc Ribosomal RNA adenine dimethylases. 99.09
KOG1271227 consensus Methyltransferases [General function pre 99.09
PRK00216239 ubiE ubiquinone/menaquinone biosynthesis methyltra 99.08
PF03602183 Cons_hypoth95: Conserved hypothetical protein 95; 99.08
PF03848192 TehB: Tellurite resistance protein TehB; InterPro: 99.07
KOG4300252 consensus Predicted methyltransferase [General fun 99.07
PLN02336 475 phosphoethanolamine N-methyltransferase 99.07
TIGR03840213 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d 99.07
TIGR01934223 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis 99.07
TIGR03438301 probable methyltransferase. This model represents 99.04
KOG2899288 consensus Predicted methyltransferase [General fun 99.03
TIGR02021219 BchM-ChlM magnesium protoporphyrin O-methyltransfe 99.02
PRK05134233 bifunctional 3-demethylubiquinone-9 3-methyltransf 99.01
PRK13168443 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe 99.01
COG2263198 Predicted RNA methylase [Translation, ribosomal st 99.0
PRK01544506 bifunctional N5-glutamine S-adenosyl-L-methionine- 99.0
PRK05785226 hypothetical protein; Provisional 99.0
PF13489161 Methyltransf_23: Methyltransferase domain; PDB: 3J 98.99
TIGR01983224 UbiG ubiquinone biosynthesis O-methyltransferase. 98.99
PRK03522315 rumB 23S rRNA methyluridine methyltransferase; Rev 98.98
TIGR02085374 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransfer 98.97
PRK13255218 thiopurine S-methyltransferase; Reviewed 98.96
PRK06202232 hypothetical protein; Provisional 98.96
TIGR00479431 rumA 23S rRNA (uracil-5-)-methyltransferase RumA. 98.96
KOG3010261 consensus Methyltransferase [General function pred 98.93
smart00138264 MeTrc Methyltransferase, chemotaxis proteins. Meth 98.93
PRK07580230 Mg-protoporphyrin IX methyl transferase; Validated 98.91
PF07021193 MetW: Methionine biosynthesis protein MetW; InterP 98.89
COG0742187 N6-adenine-specific methylase [DNA replication, re 98.89
PRK04338 382 N(2),N(2)-dimethylguanosine tRNA methyltransferase 98.88
PLN02585315 magnesium protoporphyrin IX methyltransferase 98.87
PF05891218 Methyltransf_PK: AdoMet dependent proline di-methy 98.84
PRK05031362 tRNA (uracil-5-)-methyltransferase; Validated 98.84
KOG1663237 consensus O-methyltransferase [Secondary metabolit 98.83
TIGR02143353 trmA_only tRNA (uracil-5-)-methyltransferase. This 98.82
COG4976287 Predicted methyltransferase (contains TPR repeat) 98.79
PF02475200 Met_10: Met-10+ like-protein; InterPro: IPR003402 98.78
COG3963194 Phospholipid N-methyltransferase [Lipid metabolism 98.77
TIGR00308 374 TRM1 tRNA(guanine-26,N2-N2) methyltransferase. Thi 98.76
PF00891241 Methyltransf_2: O-methyltransferase; InterPro: IPR 98.75
PRK13256226 thiopurine S-methyltransferase; Reviewed 98.73
KOG1541270 consensus Predicted protein carboxyl methylase [Ge 98.72
PRK11933 470 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; 98.72
PF08003315 Methyltransf_9: Protein of unknown function (DUF16 98.69
PTZ00338294 dimethyladenosine transferase-like protein; Provis 98.68
PF05724218 TPMT: Thiopurine S-methyltransferase (TPMT); Inter 98.67
PF10294173 Methyltransf_16: Putative methyltransferase; Inter 98.65
PRK14896258 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 98.65
KOG1661237 consensus Protein-L-isoaspartate(D-aspartate) O-me 98.65
TIGR02081194 metW methionine biosynthesis protein MetW. This pr 98.65
COG1041347 Predicted DNA modification methylase [DNA replicat 98.63
PF05185448 PRMT5: PRMT5 arginine-N-methyltransferase; InterPr 98.62
PRK11727321 23S rRNA mA1618 methyltransferase; Provisional 98.61
PF05219265 DREV: DREV methyltransferase; InterPro: IPR007884 98.57
PF09445163 Methyltransf_15: RNA cap guanine-N2 methyltransfer 98.55
PRK00274272 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 98.55
KOG3191209 consensus Predicted N6-DNA-methyltransferase [Tran 98.54
COG0030259 KsgA Dimethyladenosine transferase (rRNA methylati 98.51
TIGR00755253 ksgA dimethyladenosine transferase. Alternate name 98.51
KOG1709271 consensus Guanidinoacetate methyltransferase and r 98.5
PF03291331 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 98.5
PF01170179 UPF0020: Putative RNA methylase family UPF0020; In 98.49
COG2520341 Predicted methyltransferase [General function pred 98.46
COG2265432 TrmA SAM-dependent methyltransferases related to t 98.45
KOG1975389 consensus mRNA cap methyltransferase [RNA processi 98.34
PF01728181 FtsJ: FtsJ-like methyltransferase; InterPro: IPR00 98.33
TIGR02987 524 met_A_Alw26 type II restriction m6 adenine DNA met 98.33
COG0144355 Sun tRNA and rRNA cytosine-C5-methylases [Translat 98.28
PF02384311 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 T 98.27
PF13578106 Methyltransf_24: Methyltransferase domain; PDB: 3S 98.26
PLN02232160 ubiquinone biosynthesis methyltransferase 98.26
PRK00050296 16S rRNA m(4)C1402 methyltranserfase; Provisional 98.25
KOG1499 346 consensus Protein arginine N-methyltransferase PRM 98.23
COG4076252 Predicted RNA methylase [General function predicti 98.21
PF05958352 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferas 98.21
KOG2361264 consensus Predicted methyltransferase [General fun 98.2
PF02527184 GidB: rRNA small subunit methyltransferase G; Inte 98.19
KOG2940325 consensus Predicted methyltransferase [General fun 98.18
TIGR00478228 tly hemolysin TlyA family protein. Hemolysins are 98.17
KOG0820315 consensus Ribosomal RNA adenine dimethylase [RNA p 98.15
PRK11783 702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 98.12
COG0293205 FtsJ 23S rRNA methylase [Translation, ribosomal st 98.1
KOG3420185 consensus Predicted RNA methylase [Translation, ri 98.09
PF01189283 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR 98.08
PF12147311 Methyltransf_20: Putative methyltransferase; Inter 98.05
KOG2915314 consensus tRNA(1-methyladenosine) methyltransferas 98.05
PRK01747 662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 97.98
PF01269229 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibr 97.98
PF03059276 NAS: Nicotianamine synthase protein; InterPro: IPR 97.97
KOG1500 517 consensus Protein arginine N-methyltransferase CAR 97.96
COG0357215 GidB Predicted S-adenosylmethionine-dependent meth 97.93
PRK10742250 putative methyltransferase; Provisional 97.93
PF06080204 DUF938: Protein of unknown function (DUF938); Inte 97.89
KOG2730263 consensus Methylase [General function prediction o 97.86
PRK04148134 hypothetical protein; Provisional 97.86
PF05430124 Methyltransf_30: S-adenosyl-L-methionine-dependent 97.84
KOG3178342 consensus Hydroxyindole-O-methyltransferase and re 97.83
PF01861243 DUF43: Protein of unknown function DUF43; InterPro 97.81
PF01739196 CheR: CheR methyltransferase, SAM binding domain; 97.81
PF00398262 RrnaAD: Ribosomal RNA adenine dimethylase; InterPr 97.8
PF03141 506 Methyltransf_29: Putative S-adenosyl-L-methionine- 97.78
PF02005 377 TRM: N2,N2-dimethylguanosine tRNA methyltransferas 97.74
PF08123205 DOT1: Histone methylation protein DOT1 ; InterPro: 97.69
PRK10611287 chemotaxis methyltransferase CheR; Provisional 97.66
KOG1562337 consensus Spermidine synthase [Amino acid transpor 97.64
PF04816205 DUF633: Family of unknown function (DUF633) ; Inte 97.62
PF04989206 CmcI: Cephalosporin hydroxylase; InterPro: IPR0070 97.59
COG1867 380 TRM1 N2,N2-dimethylguanosine tRNA methyltransferas 97.59
COG0116381 Predicted N6-adenine-specific DNA methylase [DNA r 97.58
PF05148219 Methyltransf_8: Hypothetical methyltransferase; In 97.55
PRK11760357 putative 23S rRNA C2498 ribose 2'-O-ribose methylt 97.43
COG1352268 CheR Methylase of chemotaxis methyl-accepting prot 97.42
KOG3115249 consensus Methyltransferase-like protein [General 97.38
TIGR03439319 methyl_EasF probable methyltransferase domain, Eas 97.35
PF07942270 N2227: N2227-like protein; InterPro: IPR012901 Thi 97.3
TIGR01444143 fkbM_fam methyltransferase, FkbM family. Members o 97.29
KOG4589232 consensus Cell division protein FtsJ [Cell cycle c 97.28
TIGR00006305 S-adenosyl-methyltransferase MraW. Genetics paper 97.27
KOG2198375 consensus tRNA cytosine-5-methylases and related e 97.24
COG0500257 SmtA SAM-dependent methyltransferases [Secondary m 97.23
COG2384226 Predicted SAM-dependent methyltransferase [General 97.22
KOG0822649 consensus Protein kinase inhibitor [Cell cycle con 97.2
KOG2187534 consensus tRNA uracil-5-methyltransferase and rela 97.2
KOG3201201 consensus Uncharacterized conserved protein [Funct 97.15
COG1889231 NOP1 Fibrillarin-like rRNA methylase [Translation, 97.11
KOG1122460 consensus tRNA and rRNA cytosine-C5-methylase (nuc 97.11
PF09243274 Rsm22: Mitochondrial small ribosomal subunit Rsm22 97.11
cd00315275 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA meth 97.1
PRK11524 284 putative methyltransferase; Provisional 97.08
KOG3987288 consensus Uncharacterized conserved protein DREV/C 97.06
COG1063350 Tdh Threonine dehydrogenase and related Zn-depende 96.97
PF04672267 Methyltransf_19: S-adenosyl methyltransferase; Int 96.93
COG3897218 Predicted methyltransferase [General function pred 96.91
PF01795310 Methyltransf_5: MraW methylase family; InterPro: I 96.91
KOG1099294 consensus SAM-dependent methyltransferase/cell div 96.85
PF13679141 Methyltransf_32: Methyltransferase domain 96.84
PF06962140 rRNA_methylase: Putative rRNA methylase; InterPro: 96.77
KOG3045325 consensus Predicted RNA methylase involved in rRNA 96.74
COG0275314 Predicted S-adenosylmethionine-dependent methyltra 96.65
PF05971299 Methyltransf_10: Protein of unknown function (DUF8 96.65
PF07091251 FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: 96.61
PRK13699227 putative methylase; Provisional 96.61
COG1189245 Predicted rRNA methylase [Translation, ribosomal s 96.58
PF04445234 SAM_MT: Putative SAM-dependent methyltransferase; 96.54
COG1064339 AdhP Zn-dependent alcohol dehydrogenases [General 96.44
KOG0024354 consensus Sorbitol dehydrogenase [Secondary metabo 96.4
KOG2352 482 consensus Predicted spermine/spermidine synthase [ 96.39
KOG1253 525 consensus tRNA methyltransferase [Translation, rib 96.38
KOG1596317 consensus Fibrillarin and related nucleolar RNA-bi 96.3
PRK09880343 L-idonate 5-dehydrogenase; Provisional 96.29
KOG1269364 consensus SAM-dependent methyltransferases [Lipid 96.25
COG1568354 Predicted methyltransferases [General function pre 96.17
PRK09424 509 pntA NAD(P) transhydrogenase subunit alpha; Provis 96.11
PF11599246 AviRa: RRNA methyltransferase AviRa; InterPro: IPR 96.11
KOG2671421 consensus Putative RNA methylase [Replication, rec 95.94
PF10354166 DUF2431: Domain of unknown function (DUF2431); Int 95.85
COG0286489 HsdM Type I restriction-modification system methyl 95.81
PTZ00357 1072 methyltransferase; Provisional 95.8
PRK10309347 galactitol-1-phosphate dehydrogenase; Provisional 95.55
PF11968219 DUF3321: Putative methyltransferase (DUF3321); Int 95.51
PF04378245 RsmJ: Ribosomal RNA small subunit methyltransferas 95.38
PF06460299 NSP13: Coronavirus NSP13; InterPro: IPR009461 This 95.34
cd08283386 FDH_like_1 Glutathione-dependent formaldehyde dehy 95.34
PF01234256 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I 95.34
COG5459 484 Predicted rRNA methylase [Translation, ribosomal s 95.31
TIGR03451358 mycoS_dep_FDH mycothiol-dependent formaldehyde deh 95.3
TIGR01202308 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl 95.25
cd08281371 liver_ADH_like1 Zinc-dependent alcohol dehydrogena 95.14
PF07279218 DUF1442: Protein of unknown function (DUF1442); In 95.1
PF00107130 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: 95.07
PF14314 675 Methyltrans_Mon: Virus-capping methyltransferase 95.03
PF03269177 DUF268: Caenorhabditis protein of unknown function 94.93
cd08230355 glucose_DH Glucose dehydrogenase. Glucose dehydrog 94.89
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 94.85
TIGR03366280 HpnZ_proposed putative phosphonate catabolism asso 94.77
PF00145 335 DNA_methylase: C-5 cytosine-specific DNA methylase 94.67
cd08293345 PTGR2 Prostaglandin reductase. Prostaglandins and 94.58
PRK05562223 precorrin-2 dehydrogenase; Provisional 94.56
PF05711248 TylF: Macrocin-O-methyltransferase (TylF); InterPr 94.52
PHA01634156 hypothetical protein 94.47
cd08239339 THR_DH_like L-threonine dehydrogenase (TDH)-like. 94.45
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 94.43
COG2961279 ComJ Protein involved in catabolism of external DN 94.43
COG1179263 Dinucleotide-utilizing enzymes involved in molybdo 94.32
KOG1501 636 consensus Arginine N-methyltransferase [General fu 94.21
TIGR00675 315 dcm DNA-methyltransferase (dcm). All proteins in t 94.18
PLN02740381 Alcohol dehydrogenase-like 93.83
TIGR00561 511 pntA NAD(P) transhydrogenase, alpha subunit. In so 93.82
PRK10458 467 DNA cytosine methylase; Provisional 93.72
cd05188271 MDR Medium chain reductase/dehydrogenase (MDR)/zin 93.68
KOG1331293 consensus Predicted methyltransferase [General fun 93.65
COG0270 328 Dcm Site-specific DNA methylase [DNA replication, 93.64
COG4121252 Uncharacterized conserved protein [Function unknow 93.58
KOG4058199 consensus Uncharacterized conserved protein [Funct 93.55
cd08285351 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. 93.52
KOG0821326 consensus Predicted ribosomal RNA adenine dimethyl 93.51
PLN02827378 Alcohol dehydrogenase-like 93.5
KOG2793248 consensus Putative N2,N2-dimethylguanosine tRNA me 93.44
PF01555231 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 Th 93.43
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 93.18
COG0604326 Qor NADPH:quinone reductase and related Zn-depende 93.07
cd08237341 ribitol-5-phosphate_DH ribitol-5-phosphate dehydro 93.05
cd08254338 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo 92.94
cd08294329 leukotriene_B4_DH_like 13-PGR is a bifunctional en 92.81
PLN03154348 putative allyl alcohol dehydrogenase; Provisional 92.68
PRK11524284 putative methyltransferase; Provisional 92.63
PF12692160 Methyltransf_17: S-adenosyl-L-methionine methyltra 92.63
TIGR03201349 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co 92.48
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 92.44
TIGR02825325 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 92.38
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 92.37
KOG2798369 consensus Putative trehalase [Carbohydrate transpo 92.29
COG4798238 Predicted methyltransferase [General function pred 92.26
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 92.05
cd05278347 FDH_like Formaldehyde dehydrogenases. Formaldehyde 91.99
cd05285343 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a 91.98
cd08238410 sorbose_phosphate_red L-sorbose-1-phosphate reduct 91.91
PF03141506 Methyltransf_29: Putative S-adenosyl-L-methionine- 91.91
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 91.76
cd05279365 Zn_ADH1 Liver alcohol dehydrogenase and related zi 91.72
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 91.68
PF10237162 N6-adenineMlase: Probable N6-adenine methyltransfe 91.65
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 91.64
cd08295338 double_bond_reductase_like Arabidopsis alkenal dou 91.58
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 91.5
cd08300368 alcohol_DH_class_III class III alcohol dehydrogena 91.49
COG1062366 AdhC Zn-dependent alcohol dehydrogenases, class II 91.33
PF02636252 Methyltransf_28: Putative S-adenosyl-L-methionine- 91.23
cd08233351 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog 91.18
TIGR02818368 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr 91.16
PF01408120 GFO_IDH_MocA: Oxidoreductase family, NAD-binding R 91.07
PRK11064 415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 90.98
PLN02353 473 probable UDP-glucose 6-dehydrogenase 90.88
KOG1098 780 consensus Putative SAM-dependent rRNA methyltransf 90.85
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 90.84
cd08277365 liver_alcohol_DH_like Liver alcohol dehydrogenase. 90.78
cd08286345 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik 90.75
cd08232339 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 90.71
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 90.38
cd08278365 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be 90.29
PRK03562621 glutathione-regulated potassium-efflux system prot 90.19
PRK07502 307 cyclohexadienyl dehydrogenase; Validated 90.12
KOG2078495 consensus tRNA modification enzyme [RNA processing 90.03
cd08301369 alcohol_DH_plants Plant alcohol dehydrogenase. NAD 89.87
PRK10637 457 cysG siroheme synthase; Provisional 89.78
PRK13699227 putative methylase; Provisional 89.52
PRK06130 311 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.42
PRK07066 321 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.38
TIGR02819393 fdhA_non_GSH formaldehyde dehydrogenase, glutathio 89.36
TIGR00497501 hsdM type I restriction system adenine methylase ( 89.28
PLN02586360 probable cinnamyl alcohol dehydrogenase 89.18
COG1748 389 LYS9 Saccharopine dehydrogenase and related protei 88.98
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 88.9
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 88.81
cd08234334 threonine_DH_like L-threonine dehydrogenase. L-thr 88.76
PF11899380 DUF3419: Protein of unknown function (DUF3419); In 88.75
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.75
PRK10083339 putative oxidoreductase; Provisional 88.47
cd08236343 sugar_DH NAD(P)-dependent sugar dehydrogenases. Th 88.2
KOG1209289 consensus 1-Acyl dihydroxyacetone phosphate reduct 88.12
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 88.0
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 87.97
COG0287 279 TyrA Prephenate dehydrogenase [Amino acid transpor 87.81
TIGR02822329 adh_fam_2 zinc-binding alcohol dehydrogenase famil 87.78
PRK10669558 putative cation:proton antiport protein; Provision 87.69
PRK12475 338 thiamine/molybdopterin biosynthesis MoeB-like prot 87.54
COG1565370 Uncharacterized conserved protein [Function unknow 87.47
PRK03659601 glutathione-regulated potassium-efflux system prot 87.2
COG4017254 Uncharacterized protein conserved in archaea [Func 87.14
PF11312315 DUF3115: Protein of unknown function (DUF3115); In 87.03
cd08240350 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy 87.02
cd08261337 Zn_ADH7 Alcohol dehydrogenases of the MDR family. 86.97
PRK15116268 sulfur acceptor protein CsdL; Provisional 86.96
cd05288329 PGDH Prostaglandin dehydrogenases. Prostaglandins 86.95
PF06859110 Bin3: Bicoid-interacting protein 3 (Bin3); InterPr 86.78
cd08265384 Zn_ADH3 Alcohol dehydrogenases of the MDR family. 86.75
PRK00066 315 ldh L-lactate dehydrogenase; Reviewed 86.48
PRK05597 355 molybdopterin biosynthesis protein MoeB; Validated 86.24
COG0569225 TrkA K+ transport systems, NAD-binding component [ 86.23
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 86.16
PRK09422338 ethanol-active dehydrogenase/acetaldehyde-active r 86.16
PF02826178 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy 86.12
PRK07340304 ornithine cyclodeaminase; Validated 86.1
cd00755231 YgdL_like Family of activating enzymes (E1) of ubi 86.05
cd08255277 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ 86.04
COG3129292 Predicted SAM-dependent methyltransferase [General 86.03
KOG1227351 consensus Putative methyltransferase [General func 86.01
cd05281341 TDH Threonine dehydrogenase. L-threonine dehydroge 85.96
cd08231361 MDR_TM0436_like Hypothetical enzyme TM0436 resembl 85.95
TIGR02279 503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 85.72
TIGR00692340 tdh L-threonine 3-dehydrogenase. E. coli His-90 mo 85.68
cd08243320 quinone_oxidoreductase_like_1 Quinone oxidoreducta 85.63
COG3315297 O-Methyltransferase involved in polyketide biosynt 85.52
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 85.47
cd08284344 FDH_like_2 Glutathione-dependent formaldehyde dehy 85.23
PRK09496453 trkA potassium transporter peripheral membrane com 85.19
COG1086 588 Predicted nucleoside-diphosphate sugar epimerases 84.89
cd05290 307 LDH_3 A subgroup of L-lactate dehydrogenases. L-la 84.63
PRK07102243 short chain dehydrogenase; Provisional 84.62
PRK08268 507 3-hydroxy-acyl-CoA dehydrogenase; Validated 84.61
KOG0022375 consensus Alcohol dehydrogenase, class III [Second 84.53
cd08296333 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci 84.3
PF00106167 adh_short: short chain dehydrogenase alcohol dehyd 84.16
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 84.08
cd01492197 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit 84.06
PF02719293 Polysacc_synt_2: Polysaccharide biosynthesis prote 84.03
PLN02702364 L-idonate 5-dehydrogenase 83.97
COG5379 414 BtaA S-adenosylmethionine:diacylglycerol 3-amino-3 83.87
PRK05396341 tdh L-threonine 3-dehydrogenase; Validated 83.78
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 83.77
cd08263367 Zn_ADH10 Alcohol dehydrogenases of the MDR family. 83.62
cd00757228 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 83.28
PRK08618325 ornithine cyclodeaminase; Validated 83.16
TIGR00027260 mthyl_TIGR00027 methyltransferase, putative, TIGR0 83.14
PRK06223 307 malate dehydrogenase; Reviewed 83.14
cd08287345 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik 82.94
PRK15057 388 UDP-glucose 6-dehydrogenase; Provisional 82.92
PRK06949258 short chain dehydrogenase; Provisional 82.86
PTZ00117 319 malate dehydrogenase; Provisional 82.83
COG3510237 CmcI Cephalosporin hydroxylase [Defense mechanisms 82.71
PRK07688 339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 82.62
cd08262341 Zn_ADH8 Alcohol dehydrogenases of the MDR family. 82.58
PRK08213259 gluconate 5-dehydrogenase; Provisional 82.38
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 82.38
cd08245330 CAD Cinnamyl alcohol dehydrogenases (CAD) and rela 82.36
cd08279363 Zn_ADH_class_III Class III alcohol dehydrogenase. 82.33
cd01483143 E1_enzyme_family Superfamily of activating enzymes 82.33
COG0677 436 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas 82.12
PRK12921 305 2-dehydropantoate 2-reductase; Provisional 82.07
cd05291 306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 82.05
COG4301321 Uncharacterized conserved protein [Function unknow 82.05
PRK07523255 gluconate 5-dehydrogenase; Provisional 82.04
cd05284340 arabinose_DH_like D-arabinose dehydrogenase. This 82.03
PTZ00082 321 L-lactate dehydrogenase; Provisional 81.91
PLN02178375 cinnamyl-alcohol dehydrogenase 81.87
TIGR02437 714 FadB fatty oxidation complex, alpha subunit FadB. 81.75
cd05213311 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain 81.63
KOG2015 422 consensus NEDD8-activating complex, catalytic comp 81.48
PRK08762376 molybdopterin biosynthesis protein MoeB; Validated 81.47
PLN02514357 cinnamyl-alcohol dehydrogenase 81.44
PRK07454241 short chain dehydrogenase; Provisional 81.44
PRK06141314 ornithine cyclodeaminase; Validated 81.11
cd08282375 PFDH_like Pseudomonas putida aldehyde-dismutating 80.98
PRK05786238 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; 80.9
PRK05225 487 ketol-acid reductoisomerase; Validated 80.89
PF01555231 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 Th 80.89
cd01488291 Uba3_RUB Ubiquitin activating enzyme (E1) subunit 80.86
cd05292 308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 80.63
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 80.43
PRK08945247 putative oxoacyl-(acyl carrier protein) reductase; 80.35
cd01491286 Ube1_repeat1 Ubiquitin activating enzyme (E1), rep 80.34
PRK06719157 precorrin-2 dehydrogenase; Validated 80.31
PRK11730 715 fadB multifunctional fatty acid oxidation complex 80.29
PF0380796 F420_oxidored: NADP oxidoreductase coenzyme F420-d 80.27
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 80.24
PRK07417 279 arogenate dehydrogenase; Reviewed 80.19
PF00072112 Response_reg: Response regulator receiver domain; 80.12
PRK08339263 short chain dehydrogenase; Provisional 80.1
PRK11154 708 fadJ multifunctional fatty acid oxidation complex 80.07
PRK07533258 enoyl-(acyl carrier protein) reductase; Provisiona 80.05
>PLN02366 spermidine synthase Back     alignment and domain information 
Probab=100.00  E-value=4.8e-51  Score=380.62  Aligned_cols=251  Identities=80%  Similarity=1.371  Sum_probs=233.9

Q ss_pred             CCCCCCCCCCcccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHH
Q 020933           38 DSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMIT  117 (319)
Q Consensus        38 ~~~~~~~~~~~~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~  117 (319)
                      .|++..+++..|.++||+|.+++|+|+.++++|+++|++.+|+||+|.|+++..+|++|+|||.+|+++++++.|++||+
T Consensus         3 ~~~~~~~~~~~~~~~w~~e~~~~~~~~~~~~~v~~~l~~~~s~yQ~i~v~~~~~~g~~L~lDg~~q~~~~de~~Y~e~l~   82 (308)
T PLN02366          3 APESEAKCHSTVIPGWFSEISPMWPGEAHSLKVEKVLFQGKSDFQDVLVFESATYGKVLVLDGVIQLTERDECAYQEMIT   82 (308)
T ss_pred             CCCCCccccchhhhceEeecccCCCCceEEEEEeeEEEeccCCCeeEEEEEcCCCceEEEECCEeeecCccHHHHHHHHH
Confidence            45667788889999999999888999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC
Q 020933          118 HLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP  197 (319)
Q Consensus       118 ~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~  197 (319)
                      |++++.++++++||+||||+|+++++++++++..+|++||||++|+++|+++|+....+++++|++++++|+++|++..+
T Consensus        83 h~~l~~~~~pkrVLiIGgG~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~  162 (308)
T PLN02366         83 HLPLCSIPNPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAP  162 (308)
T ss_pred             HHHHhhCCCCCeEEEEcCCccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhcc
Confidence            99999999999999999999999999999987889999999999999999999876545788999999999999998654


Q ss_pred             CCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccC
Q 020933          198 EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP  277 (319)
Q Consensus       198 ~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~  277 (319)
                      +++||+||+|+++|.+++..+++.+||+.++++|+|||++++|++++|.+.+.++.+.++++++|+.++.++...||+|+
T Consensus       163 ~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~s~~~~~~~~~~i~~tl~~~F~~~v~~~~~~vPsy~  242 (308)
T PLN02366        163 EGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAESMWLHMDLIEDLIAICRETFKGSVNYAWTTVPTYP  242 (308)
T ss_pred             CCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcCCcccchHHHHHHHHHHHHHCCCceeEEEecCCCcC
Confidence            57899999999999988888999999999999999999999999999999999999999999999668888888999999


Q ss_pred             CCee--EEEEcCC
Q 020933          278 RTFL--PSCSAVN  288 (319)
Q Consensus       278 ~g~~--~~~S~~~  288 (319)
                      +|.|  ++||++.
T Consensus       243 ~g~w~f~~as~~~  255 (308)
T PLN02366        243 SGVIGFVLCSKEG  255 (308)
T ss_pred             CCceEEEEEECCC
Confidence            9877  8888873

>KOG1562 consensus Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2 Back     alignment and domain information
>PRK00536 speE spermidine synthase; Provisional Back     alignment and domain information
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00811 spermidine synthase; Provisional Back     alignment and domain information
>PLN02823 spermine synthase Back     alignment and domain information
>TIGR00417 speE spermidine synthase Back     alignment and domain information
>PRK01581 speE spermidine synthase; Validated Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>PRK04457 spermidine synthase; Provisional Back     alignment and domain information
>COG2521 Predicted archaeal methyltransferase [General function prediction only] Back     alignment and domain information
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A Back     alignment and domain information
>COG4123 Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A Back     alignment and domain information
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] Back     alignment and domain information
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases Back     alignment and domain information
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase Back     alignment and domain information
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed Back     alignment and domain information
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>TIGR00138 gidB 16S rRNA methyltransferase GidB Back     alignment and domain information
>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional Back     alignment and domain information
>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional Back     alignment and domain information
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit Back     alignment and domain information
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A Back     alignment and domain information
>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG4122 Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed Back     alignment and domain information
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific Back     alignment and domain information
>PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional Back     alignment and domain information
>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific Back     alignment and domain information
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases Back     alignment and domain information
>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional Back     alignment and domain information
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated Back     alignment and domain information
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>PLN02781 Probable caffeoyl-CoA O-methyltransferase Back     alignment and domain information
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed Back     alignment and domain information
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] Back     alignment and domain information
>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PRK01683 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional Back     alignment and domain information
>TIGR00536 hemK_fam HemK family putative methylases Back     alignment and domain information
>PLN02476 O-methyltransferase Back     alignment and domain information
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] Back     alignment and domain information
>PRK14103 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only] Back     alignment and domain information
>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific Back     alignment and domain information
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A Back     alignment and domain information
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase Back     alignment and domain information
>PRK11207 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>PRK07402 precorrin-6B methylase; Provisional Back     alignment and domain information
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) Back     alignment and domain information
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional Back     alignment and domain information
>PLN02233 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PRK04266 fibrillarin; Provisional Back     alignment and domain information
>PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 Back     alignment and domain information
>PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>TIGR00740 methyltransferase, putative Back     alignment and domain information
>TIGR00537 hemK_rel_arch HemK-related putative methylase Back     alignment and domain information
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase Back     alignment and domain information
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase Back     alignment and domain information
>PRK14967 putative methyltransferase; Provisional Back     alignment and domain information
>PLN02589 caffeoyl-CoA O-methyltransferase Back     alignment and domain information
>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PLN02244 tocopherol O-methyltransferase Back     alignment and domain information
>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional Back     alignment and domain information
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>TIGR00477 tehB tellurite resistance protein TehB Back     alignment and domain information
>COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] Back     alignment and domain information
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR02072 BioC biotin biosynthesis protein BioC Back     alignment and domain information
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins Back     alignment and domain information
>TIGR00406 prmA ribosomal protein L11 methyltransferase Back     alignment and domain information
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional Back     alignment and domain information
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional Back     alignment and domain information
>PLN03075 nicotianamine synthase; Provisional Back     alignment and domain information
>PF10672 Methyltrans_SAM: S-adenosylmethionine-dependent methyltransferase; InterPro: IPR019614 Members of this entry are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species Back     alignment and domain information
>PRK10258 biotin biosynthesis protein BioC; Provisional Back     alignment and domain information
>PRK14968 putative methyltransferase; Provisional Back     alignment and domain information
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed Back     alignment and domain information
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 Back     alignment and domain information
>TIGR00438 rrmJ cell division protein FtsJ Back     alignment and domain information
>PRK06922 hypothetical protein; Provisional Back     alignment and domain information
>PRK12335 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PHA03411 putative methyltransferase; Provisional Back     alignment and domain information
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase Back     alignment and domain information
>PRK10901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PRK14903 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PLN02490 MPBQ/MSBQ methyltransferase Back     alignment and domain information
>PRK14902 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] Back     alignment and domain information
>TIGR01177 conserved hypothetical protein TIGR01177 Back     alignment and domain information
>PRK08317 hypothetical protein; Provisional Back     alignment and domain information
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional Back     alignment and domain information
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed Back     alignment and domain information
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences Back     alignment and domain information
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional Back     alignment and domain information
>TIGR00452 methyltransferase, putative Back     alignment and domain information
>KOG2904 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PLN02672 methionine S-methyltransferase Back     alignment and domain information
>PTZ00146 fibrillarin; Provisional Back     alignment and domain information
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) Back     alignment and domain information
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB Back     alignment and domain information
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase Back     alignment and domain information
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>PRK14904 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00095 RNA methyltransferase, RsmD family Back     alignment and domain information
>PHA03412 putative methyltransferase; Provisional Back     alignment and domain information
>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU Back     alignment and domain information
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>PRK14901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>smart00650 rADc Ribosomal RNA adenine dimethylases Back     alignment and domain information
>KOG1271 consensus Methyltransferases [General function prediction only] Back     alignment and domain information
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed Back     alignment and domain information
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH Back     alignment and domain information
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB Back     alignment and domain information
>KOG4300 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family Back     alignment and domain information
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases Back     alignment and domain information
>TIGR03438 probable methyltransferase Back     alignment and domain information
>KOG2899 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase Back     alignment and domain information
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional Back     alignment and domain information
>PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed Back     alignment and domain information
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed Back     alignment and domain information
>PRK05785 hypothetical protein; Provisional Back     alignment and domain information
>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C Back     alignment and domain information
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase Back     alignment and domain information
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed Back     alignment and domain information
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB Back     alignment and domain information
>PRK13255 thiopurine S-methyltransferase; Reviewed Back     alignment and domain information
>PRK06202 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA Back     alignment and domain information
>KOG3010 consensus Methyltransferase [General function prediction only] Back     alignment and domain information
>smart00138 MeTrc Methyltransferase, chemotaxis proteins Back     alignment and domain information
>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated Back     alignment and domain information
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins Back     alignment and domain information
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional Back     alignment and domain information
>PLN02585 magnesium protoporphyrin IX methyltransferase Back     alignment and domain information
>PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like Back     alignment and domain information
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated Back     alignment and domain information
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase Back     alignment and domain information
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] Back     alignment and domain information
>PF02475 Met_10: Met-10+ like-protein; InterPro: IPR003402 This entry represents the Trm5 family Back     alignment and domain information
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism] Back     alignment and domain information
>TIGR00308 TRM1 tRNA(guanine-26,N2-N2) methyltransferase Back     alignment and domain information
>PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PRK13256 thiopurine S-methyltransferase; Reviewed Back     alignment and domain information
>KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] Back     alignment and domain information
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed Back     alignment and domain information
>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PTZ00338 dimethyladenosine transferase-like protein; Provisional Back     alignment and domain information
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes Back     alignment and domain information
>PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases Back     alignment and domain information
>PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional Back     alignment and domain information
>KOG1661 consensus Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02081 metW methionine biosynthesis protein MetW Back     alignment and domain information
>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] Back     alignment and domain information
>PRK11727 23S rRNA mA1618 methyltransferase; Provisional Back     alignment and domain information
>PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes Back     alignment and domain information
>PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ] Back     alignment and domain information
>PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed Back     alignment and domain information
>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00755 ksgA dimethyladenosine transferase Back     alignment and domain information
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes Back     alignment and domain information
>PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase Back     alignment and domain information
>COG2520 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] Back     alignment and domain information
>PF01728 FtsJ: FtsJ-like methyltransferase; InterPro: IPR002877 RrmJ (FtsJ) is a well conserved heat shock protein present in prokaryotes, archaea, and eukaryotes Back     alignment and domain information
>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family Back     alignment and domain information
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2 Back     alignment and domain information
>PF13578 Methyltransf_24: Methyltransferase domain; PDB: 3SSO_A 3SSN_C 3SSM_D Back     alignment and domain information
>PLN02232 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PRK00050 16S rRNA m(4)C1402 methyltranserfase; Provisional Back     alignment and domain information
>KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] Back     alignment and domain information
>COG4076 Predicted RNA methylase [General function prediction only] Back     alignment and domain information
>PF05958 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferase; InterPro: IPR010280 This family consists of (uracil-5-)-methyltransferases 2 Back     alignment and domain information
>KOG2361 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PF02527 GidB: rRNA small subunit methyltransferase G; InterPro: IPR003682 This entry represents a rRNA small subunit methyltransferase G Back     alignment and domain information
>KOG2940 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR00478 tly hemolysin TlyA family protein Back     alignment and domain information
>KOG0820 consensus Ribosomal RNA adenine dimethylase [RNA processing and modification] Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG3420 consensus Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01189 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR001678 This domain is found in archaeal, bacterial and eukaryotic proteins Back     alignment and domain information
>PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length Back     alignment and domain information
>KOG2915 consensus tRNA(1-methyladenosine) methyltransferase, subunit GCD14 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>PF01269 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibrillarin is a component of a nucleolar small nuclear ribonucleoprotein (SnRNP), functioning in vivo in ribosomal RNA processing [, ] Back     alignment and domain information
>PF03059 NAS: Nicotianamine synthase protein; InterPro: IPR004298 Nicotianamine synthase 2 Back     alignment and domain information
>KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription] Back     alignment and domain information
>COG0357 GidB Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK10742 putative methyltransferase; Provisional Back     alignment and domain information
>PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes Back     alignment and domain information
>KOG2730 consensus Methylase [General function prediction only] Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PF05430 Methyltransf_30: S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR008471 This entry contains several uncharacterised bacterial proteins with no known function Back     alignment and domain information
>KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] Back     alignment and domain information
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised Back     alignment and domain information
>PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PF00398 RrnaAD: Ribosomal RNA adenine dimethylase; InterPro: IPR001737 This family of proteins include rRNA adenine dimethylases (e Back     alignment and domain information
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
>PF02005 TRM: N2,N2-dimethylguanosine tRNA methyltransferase; InterPro: IPR002905 This enzyme 2 Back     alignment and domain information
>PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 [] Back     alignment and domain information
>PRK10611 chemotaxis methyltransferase CheR; Provisional Back     alignment and domain information
>KOG1562 consensus Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins Back     alignment and domain information
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) [] Back     alignment and domain information
>COG1867 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases Back     alignment and domain information
>PRK11760 putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional Back     alignment and domain information
>COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>KOG3115 consensus Methyltransferase-like protein [General function prediction only] Back     alignment and domain information
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family Back     alignment and domain information
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) Back     alignment and domain information
>TIGR01444 fkbM_fam methyltransferase, FkbM family Back     alignment and domain information
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR00006 S-adenosyl-methyltransferase MraW Back     alignment and domain information
>KOG2198 consensus tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] Back     alignment and domain information
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only] Back     alignment and domain information
>KOG0822 consensus Protein kinase inhibitor [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG2187 consensus tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG3201 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1122 consensus tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2) [RNA processing and modification] Back     alignment and domain information
>PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>cd00315 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology Back     alignment and domain information
>PRK11524 putative methyltransferase; Provisional Back     alignment and domain information
>KOG3987 consensus Uncharacterized conserved protein DREV/CGI-81 [Function unknown] Back     alignment and domain information
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins Back     alignment and domain information
>COG3897 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PF01795 Methyltransf_5: MraW methylase family; InterPro: IPR002903 This is a family of S-adenosyl-L-methionine-dependent methyltransferases, which are found primarily, though not exclusively, in bacteria Back     alignment and domain information
>KOG1099 consensus SAM-dependent methyltransferase/cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>PF13679 Methyltransf_32: Methyltransferase domain Back     alignment and domain information
>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases Back     alignment and domain information
>KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] Back     alignment and domain information
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF05971 Methyltransf_10: Protein of unknown function (DUF890); InterPro: IPR010286 This family consists of several conserved hypothetical proteins from both eukaryotes and prokaryotes Back     alignment and domain information
>PF07091 FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: 3LCU_A 3LCV_B 3FRH_A 3FRI_A 3B89_A 3FZG_A Back     alignment and domain information
>PRK13699 putative methylase; Provisional Back     alignment and domain information
>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF04445 SAM_MT: Putative SAM-dependent methyltransferase; InterPro: IPR007536 This family of proteins is functionally uncharacterised Back     alignment and domain information
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] Back     alignment and domain information
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1253 consensus tRNA methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1596 consensus Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification] Back     alignment and domain information
>PRK09880 L-idonate 5-dehydrogenase; Provisional Back     alignment and domain information
>KOG1269 consensus SAM-dependent methyltransferases [Lipid transport and metabolism; General function prediction only] Back     alignment and domain information
>COG1568 Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>PF11599 AviRa: RRNA methyltransferase AviRa; InterPro: IPR024268 This family of proteins includes the methyltransferase AviRa from Streptomyces viridochromogenes Back     alignment and domain information
>KOG2671 consensus Putative RNA methylase [Replication, recombination and repair] Back     alignment and domain information
>PF10354 DUF2431: Domain of unknown function (DUF2431); InterPro: IPR019446 This entry represents the N-terminal domain of a family of proteins whose function is not known Back     alignment and domain information
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms] Back     alignment and domain information
>PTZ00357 methyltransferase; Provisional Back     alignment and domain information
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein Back     alignment and domain information
>PF04378 RsmJ: Ribosomal RNA small subunit methyltransferase D, RsmJ; InterPro: IPR007473 This is a bacterial protein of unknown function, possibly secreted Back     alignment and domain information
>PF06460 NSP13: Coronavirus NSP13; InterPro: IPR009461 This domain covers the NSP13 region of the coronavirus polyprotein Back     alignment and domain information
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 Back     alignment and domain information
>PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>COG5459 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase Back     alignment and domain information
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase Back     alignment and domain information
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) Back     alignment and domain information
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length Back     alignment and domain information
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 Back     alignment and domain information
>PF14314 Methyltrans_Mon: Virus-capping methyltransferase Back     alignment and domain information
>PF03269 DUF268: Caenorhabditis protein of unknown function, DUF268; InterPro: IPR004951 This family consists of proteins of unknown function found in Caenorhabditis species Back     alignment and domain information
>cd08230 glucose_DH Glucose dehydrogenase Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase Back     alignment and domain information
>PF00145 DNA_methylase: C-5 cytosine-specific DNA methylase; InterPro: IPR001525 C-5 cytosine-specific DNA methylases (2 Back     alignment and domain information
>cd08293 PTGR2 Prostaglandin reductase Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>PF05711 TylF: Macrocin-O-methyltransferase (TylF); InterPro: IPR008884 This family consists of bacterial macrocin O-methyltransferase (TylF) proteins Back     alignment and domain information
>PHA01634 hypothetical protein Back     alignment and domain information
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>COG2961 ComJ Protein involved in catabolism of external DNA [General function prediction only] Back     alignment and domain information
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] Back     alignment and domain information
>KOG1501 consensus Arginine N-methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR00675 dcm DNA-methyltransferase (dcm) Back     alignment and domain information
>PLN02740 Alcohol dehydrogenase-like Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>PRK10458 DNA cytosine methylase; Provisional Back     alignment and domain information
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family Back     alignment and domain information
>KOG1331 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>COG0270 Dcm Site-specific DNA methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>COG4121 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG4058 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases Back     alignment and domain information
>KOG0821 consensus Predicted ribosomal RNA adenine dimethylase [RNA processing and modification] Back     alignment and domain information
>PLN02827 Alcohol dehydrogenase-like Back     alignment and domain information
>KOG2793 consensus Putative N2,N2-dimethylguanosine tRNA methyltransferase [RNA processing and modification] Back     alignment and domain information
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] Back     alignment and domain information
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase Back     alignment and domain information
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members Back     alignment and domain information
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity Back     alignment and domain information
>PLN03154 putative allyl alcohol dehydrogenase; Provisional Back     alignment and domain information
>PRK11524 putative methyltransferase; Provisional Back     alignment and domain information
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B Back     alignment and domain information
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>KOG2798 consensus Putative trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4798 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>cd05278 FDH_like Formaldehyde dehydrogenases Back     alignment and domain information
>cd05285 sorbitol_DH Sorbitol dehydrogenase Back     alignment and domain information
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase Back     alignment and domain information
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF10237 N6-adenineMlase: Probable N6-adenine methyltransferase; InterPro: IPR019369 This family of proteins, which are of approximately 200 residues in length, contain a highly conserved Glu-Phe-Trp (QFW) motif close to the N terminus and an Asp/Asn-Pro-Pro-Tyr/Phe motif in the centre Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases Back     alignment and domain information
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] Back     alignment and domain information
>PF02636 Methyltransf_28: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR003788 This entry describes proteins of unknown function Back     alignment and domain information
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase Back     alignment and domain information
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Back     alignment and domain information
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>KOG1098 consensus Putative SAM-dependent rRNA methyltransferase SPB1 [RNA processing and modification; General function prediction only] Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase Back     alignment and domain information
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like Back     alignment and domain information
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK07502 cyclohexadienyl dehydrogenase; Validated Back     alignment and domain information
>KOG2078 consensus tRNA modification enzyme [RNA processing and modification] Back     alignment and domain information
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase Back     alignment and domain information
>PRK10637 cysG siroheme synthase; Provisional Back     alignment and domain information
>PRK13699 putative methylase; Provisional Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent Back     alignment and domain information
>TIGR00497 hsdM type I restriction system adenine methylase (hsdM) Back     alignment and domain information
>PLN02586 probable cinnamyl alcohol dehydrogenase Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>cd08234 threonine_DH_like L-threonine dehydrogenase Back     alignment and domain information
>PF11899 DUF3419: Protein of unknown function (DUF3419); InterPro: IPR021829 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK10083 putative oxidoreductase; Provisional Back     alignment and domain information
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases Back     alignment and domain information
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>COG1565 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG4017 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>PF11312 DUF3115: Protein of unknown function (DUF3115); InterPro: IPR021463 This eukaryotic family of proteins has no known function Back     alignment and domain information
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase Back     alignment and domain information
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>cd05288 PGDH Prostaglandin dehydrogenases Back     alignment and domain information
>PF06859 Bin3: Bicoid-interacting protein 3 (Bin3); InterPro: IPR010675 This entry represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3) Back     alignment and domain information
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional Back     alignment and domain information
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related Back     alignment and domain information
>PRK07340 ornithine cyclodeaminase; Validated Back     alignment and domain information
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E Back     alignment and domain information
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members Back     alignment and domain information
>COG3129 Predicted SAM-dependent methyltransferase [General function prediction only] Back     alignment and domain information
>KOG1227 consensus Putative methyltransferase [General function prediction only] Back     alignment and domain information
>cd05281 TDH Threonine dehydrogenase Back     alignment and domain information
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>TIGR00692 tdh L-threonine 3-dehydrogenase Back     alignment and domain information
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) Back     alignment and domain information
>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] Back     alignment and domain information
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK07102 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) Back     alignment and domain information
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 Back     alignment and domain information
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases Back     alignment and domain information
>PLN02702 L-idonate 5-dehydrogenase Back     alignment and domain information
>COG5379 BtaA S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase [Lipid metabolism] Back     alignment and domain information
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family Back     alignment and domain information
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA Back     alignment and domain information
>PRK08618 ornithine cyclodeaminase; Validated Back     alignment and domain information
>TIGR00027 mthyl_TIGR00027 methyltransferase, putative, TIGR00027 family Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like Back     alignment and domain information
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional Back     alignment and domain information
>PRK06949 short chain dehydrogenase; Provisional Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>COG3510 CmcI Cephalosporin hydroxylase [Defense mechanisms] Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family Back     alignment and domain information
>PRK08213 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins Back     alignment and domain information
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>COG4301 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK07523 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information
>cd05284 arabinose_DH_like D-arabinose dehydrogenase Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>PLN02178 cinnamyl-alcohol dehydrogenase Back     alignment and domain information
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB Back     alignment and domain information
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase Back     alignment and domain information
>KOG2015 consensus NEDD8-activating complex, catalytic component UBA3 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PLN02514 cinnamyl-alcohol dehydrogenase Back     alignment and domain information
>PRK07454 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK06141 ornithine cyclodeaminase; Validated Back     alignment and domain information
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) Back     alignment and domain information
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Back     alignment and domain information
>PRK05225 ketol-acid reductoisomerase; Validated Back     alignment and domain information
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases Back     alignment and domain information
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional Back     alignment and domain information
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>PRK07417 arogenate dehydrogenase; Reviewed Back     alignment and domain information
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>PRK08339 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1xj5_A334 X-Ray Structure Of Spermidine Synthase From Arabido 1e-119
2pss_A321 The Structure Of Plasmodium Falciparum Spermidine S 2e-67
2pwp_A282 Crystal Structure Of Spermidine Synthase From Plasm 3e-67
2hte_A283 The Crystal Structure Of Spermidine Synthase From P 3e-67
2o05_A304 Human Spermidine Synthase Length = 304 4e-65
3rw9_A304 Crystal Structure Of Human Spermidine Synthase In C 4e-65
2b2c_A314 Cloning, Expression, Characterisation And Three- Di 3e-63
3bwb_A304 Crystal Structure Of The Apo Form Of Spermidine Syn 2e-56
3o4f_A294 Crystal Structure Of Spermidine Synthase From E. Co 2e-40
1iy9_A275 Crystal Structure Of Spermidine Synthase Length = 2 1e-37
3anx_A314 Crystal Structure Of TriamineAGMATINE AMINOPROPYLTR 2e-34
1uir_A314 Crystal Structure Of Polyamine Aminopropyltransfeas 5e-34
1jq3_A296 Crystal Structure Of Spermidine Synthase In Complex 1e-33
1mjf_A281 Putative Spermidine Synthetase From Pyrococcus Furi 3e-26
2e5w_A280 Crystal Structure Of Spermidine Synthase From Pyroc 9e-26
>pdb|1XJ5|A Chain A, X-Ray Structure Of Spermidine Synthase From Arabidopsis Thaliana Gene At1g23820 Length = 334 Back     alignment and structure 
Iteration: 1

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/279 (74%), Positives = 236/279 (84%), Gaps = 11/279 (3%)
Query: 2   AETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEM---DSNKQPDCISSVIPGWFSEIS 58
           ++    +ATDL  KRPR++      ++N G+   E    D  K+P C S+VIPGWFSE S
Sbjct: 1   SDAKETSATDL--KRPREE------DDNGGAATXETENGDQKKEPACFSTVIPGWFSEXS 52
Query: 59  PMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITH 118
           P WPGEAHSLKVEK+LFQGKSDYQ+V+VFQS+TYGKVL+LDGVIQLTERDECAYQE ITH
Sbjct: 53  PXWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEXITH 112
Query: 119 LPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE 178
           LPLCSIPNPKKVLVI      VLREV+RH+S+E+ID CEIDK VVDVSKQFFPDVA+G+E
Sbjct: 113 LPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDXCEIDKXVVDVSKQFFPDVAIGYE 172
Query: 179 DPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVS 238
           DPRV L IGDGVAFLK   EG+YDAVIVDSSDPIGPA+ELFEKPFF+SVA+ALRPGGVV 
Sbjct: 173 DPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVC 232
Query: 239 TQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 277
           TQAES+WLH  IIEDIV+NCR+IFKGSVNYAWT+VPTYP
Sbjct: 233 TQAESLWLHXDIIEDIVSNCREIFKGSVNYAWTSVPTYP 271
>pdb|2PSS|A Chain A, The Structure Of Plasmodium Falciparum Spermidine Synthase In Its Apo- Form Length = 321 Back     alignment and structure
>pdb|2PWP|A Chain A, Crystal Structure Of Spermidine Synthase From Plasmodium Falciparum In Complex With Spermidine Length = 282 Back     alignment and structure
>pdb|2HTE|A Chain A, The Crystal Structure Of Spermidine Synthase From P. Falciparum In Complex With 5'-Methylthioadenosine Length = 283 Back     alignment and structure
>pdb|2O05|A Chain A, Human Spermidine Synthase Length = 304 Back     alignment and structure
>pdb|3RW9|A Chain A, Crystal Structure Of Human Spermidine Synthase In Complex With Decarboxylated S-Adenosylhomocysteine Length = 304 Back     alignment and structure
>pdb|2B2C|A Chain A, Cloning, Expression, Characterisation And Three- Dimensional Structure Determination Of The Caenorhabditis Elegans Spermidine Synthase Length = 314 Back     alignment and structure
>pdb|3BWB|A Chain A, Crystal Structure Of The Apo Form Of Spermidine Synthase From Trypanosoma Cruzi At 2.5 A Resolution Length = 304 Back     alignment and structure
>pdb|3O4F|A Chain A, Crystal Structure Of Spermidine Synthase From E. Coli Length = 294 Back     alignment and structure
>pdb|1IY9|A Chain A, Crystal Structure Of Spermidine Synthase Length = 275 Back     alignment and structure
>pdb|3ANX|A Chain A, Crystal Structure Of TriamineAGMATINE AMINOPROPYLTRANSFERASE (SPEE) From Thermus Thermophilus, Complexed With Mta Length = 314 Back     alignment and structure
>pdb|1UIR|A Chain A, Crystal Structure Of Polyamine Aminopropyltransfease From Thermus Thermophilus Length = 314 Back     alignment and structure
>pdb|1JQ3|A Chain A, Crystal Structure Of Spermidine Synthase In Complex With Transition State Analogue Adodato Length = 296 Back     alignment and structure
>pdb|1MJF|A Chain A, Putative Spermidine Synthetase From Pyrococcus Furiosus Pfu- 132382 Length = 281 Back     alignment and structure
>pdb|2E5W|A Chain A, Crystal Structure Of Spermidine Synthase From Pyrococcus Horikoshii Ot3 Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1xj5_A334 Spermidine synthase 1; structural genomics, protei 1e-148
2i7c_A283 Spermidine synthase; transferase, structural genom 1e-137
2pt6_A321 Spermidine synthase; transferase, structural genom 1e-136
2b2c_A314 Spermidine synthase; beta-alpha, transferase; 2.50 1e-136
2o07_A304 Spermidine synthase; structural genomics, structur 1e-135
3bwc_A304 Spermidine synthase; SAM, SGPP, structura genomics 1e-134
1iy9_A275 Spermidine synthase; rossmann fold, structural gen 1e-132
3adn_A294 Spermidine synthase; aminopropyltransferase, polya 1e-130
1inl_A296 Spermidine synthase; beta-barrel, rossman fold, st 1e-129
1mjf_A281 Spermidine synthase; spermidine synthetase, struct 1e-124
1uir_A314 Polyamine aminopropyltransferase; spermidien synth 1e-123
2qfm_A364 Spermine synthase; spermidine aminopropyltransfera 1e-108
2cmg_A262 Spermidine synthase; transferase, putrescine amino 2e-98
3gjy_A317 Spermidine synthase; APC62791, structural genomics 8e-49
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 2e-09
1zx0_A236 Guanidinoacetate N-methyltransferase; structural g 2e-08
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
3ntv_A232 MW1564 protein; rossmann fold, putative methyltran 2e-06
3dr5_A221 Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 5e-06
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 5e-06
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 8e-06
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 2e-05
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 3e-05
3c3p_A210 Methyltransferase; NP_951602.1, structural genomic 3e-05
2r3s_A335 Uncharacterized protein; methyltransferase domain, 3e-05
2gpy_A233 O-methyltransferase; structural genomics, PSI, pro 4e-05
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 6e-05
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 1e-04
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 1e-04
3tfw_A248 Putative O-methyltransferase; PSI-biology, nysgrc, 2e-04
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 2e-04
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 3e-04
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 3e-04
3dli_A240 Methyltransferase; PSI-II, NYSGXRC, structural gen 4e-04
3dp7_A363 SAM-dependent methyltransferase; structural genomi 4e-04
3fpf_A298 Mtnas, putative uncharacterized protein; thermonic 4e-04
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 5e-04
3ocj_A305 Putative exported protein; structural genomics, PS 6e-04
3d2l_A243 SAM-dependent methyltransferase; ZP_00538691.1, st 8e-04
3c3y_A237 Pfomt, O-methyltransferase; plant secondary metabo 8e-04
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A Length = 334 Back     alignment and structure
 Score =  419 bits (1079), Expect = e-148
 Identities = 212/269 (78%), Positives = 239/269 (88%), Gaps = 3/269 (1%)

Query: 9   ATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSL 68
            +   LKRPR++   + N           D  K+P C S+VIPGWFSE+SPMWPGEAHSL
Sbjct: 6   TSATDLKRPREE---DDNGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSL 62

Query: 69  KVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK 128
           KVEK+LFQGKSDYQ+V+VFQS+TYGKVL+LDGVIQLTERDECAYQEMITHLPLCSIPNPK
Sbjct: 63  KVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPK 122

Query: 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGD 188
           KVLVIGGGDGGVLREV+RH+S+E+ID+CEIDKMVVDVSKQFFPDVA+G+EDPRV L IGD
Sbjct: 123 KVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD 182

Query: 189 GVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHM 248
           GVAFLK   EG+YDAVIVDSSDPIGPA+ELFEKPFF+SVA+ALRPGGVV TQAES+WLHM
Sbjct: 183 GVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHM 242

Query: 249 HIIEDIVANCRQIFKGSVNYAWTTVPTYP 277
            IIEDIV+NCR+IFKGSVNYAWT+VPTYP
Sbjct: 243 DIIEDIVSNCREIFKGSVNYAWTSVPTYP 271
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* Length = 283 Back     alignment and structure
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* Length = 321 Back     alignment and structure
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 Length = 314 Back     alignment and structure
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* Length = 304 Back     alignment and structure
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* Length = 304 Back     alignment and structure
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 Length = 275 Back     alignment and structure
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* Length = 296 Back     alignment and structure
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* Length = 281 Back     alignment and structure
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* Length = 314 Back     alignment and structure
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A Length = 262 Back     alignment and structure
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} Length = 317 Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Length = 217 Back     alignment and structure
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} SCOP: c.66.1.16 PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Length = 236 Back     alignment and structure
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Length = 950 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} Length = 232 Back     alignment and structure
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} Length = 221 Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Length = 219 Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Length = 375 Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Length = 194 Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Length = 254 Back     alignment and structure
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} Length = 210 Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Length = 335 Back     alignment and structure
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} Length = 233 Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Length = 297 Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Length = 256 Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Length = 266 Back     alignment and structure
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} Length = 248 Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Length = 352 Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Length = 195 Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Length = 218 Back     alignment and structure
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} Length = 240 Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Length = 363 Back     alignment and structure
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298 Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Length = 273 Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Length = 305 Back     alignment and structure
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} Length = 243 Back     alignment and structure
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
3o4f_A294 Spermidine synthase; aminopropyltransferase, polya 100.0
1xj5_A334 Spermidine synthase 1; structural genomics, protei 100.0
3c6k_A381 Spermine synthase; spermidine aminopropyltransfera 100.0
3adn_A294 Spermidine synthase; aminopropyltransferase, polya 100.0
2i7c_A283 Spermidine synthase; transferase, structural genom 100.0
2o07_A304 Spermidine synthase; structural genomics, structur 100.0
1iy9_A275 Spermidine synthase; rossmann fold, structural gen 100.0
2b2c_A314 Spermidine synthase; beta-alpha, transferase; 2.50 100.0
2qfm_A364 Spermine synthase; spermidine aminopropyltransfera 100.0
1inl_A296 Spermidine synthase; beta-barrel, rossman fold, st 100.0
2pt6_A321 Spermidine synthase; transferase, structural genom 100.0
3bwc_A304 Spermidine synthase; SAM, SGPP, structura genomics 100.0
1uir_A314 Polyamine aminopropyltransferase; spermidien synth 100.0
1mjf_A281 Spermidine synthase; spermidine synthetase, struct 100.0
2cmg_A262 Spermidine synthase; transferase, putrescine amino 100.0
3gjy_A317 Spermidine synthase; APC62791, structural genomics 100.0
3orh_A236 Guanidinoacetate N-methyltransferase; structura ge 99.64
3p9n_A189 Possible methyltransferase (methylase); RV2966C, a 99.61
3dxy_A218 TRNA (guanine-N(7)-)-methyltransferase; rossmann f 99.6
3dr5_A221 Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 99.6
2fca_A213 TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac 99.59
2ozv_A260 Hypothetical protein ATU0636; structural genomics, 99.58
1yzh_A214 TRNA (guanine-N(7)-)-methyltransferase; alpha-beta 99.58
3ntv_A232 MW1564 protein; rossmann fold, putative methyltran 99.58
4gek_A261 TRNA (CMO5U34)-methyltransferase; structural genom 99.56
3tfw_A248 Putative O-methyltransferase; PSI-biology, nysgrc, 99.56
3c3y_A237 Pfomt, O-methyltransferase; plant secondary metabo 99.56
1sui_A247 Caffeoyl-COA O-methyltransferase; rossmann fold, p 99.56
1xdz_A240 Methyltransferase GIDB; MCSG, protein structure in 99.55
3duw_A223 OMT, O-methyltransferase, putative; alternating of 99.55
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 99.55
3c3p_A210 Methyltransferase; NP_951602.1, structural genomic 99.53
3lpm_A259 Putative methyltransferase; structural genomics, p 99.53
4hg2_A257 Methyltransferase type 11; structural genomics, PS 99.52
1zx0_A236 Guanidinoacetate N-methyltransferase; structural g 99.52
3ckk_A235 TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- 99.52
2igt_A332 SAM dependent methyltransferase; alpha-beta sandwi 99.52
3g89_A249 Ribosomal RNA small subunit methyltransferase G; 1 99.52
3e05_A204 Precorrin-6Y C5,15-methyltransferase (decarboxyla; 99.52
3fpf_A298 Mtnas, putative uncharacterized protein; thermonic 99.52
3mti_A185 RRNA methylase; SAM-dependent, PSI, MCSG, structur 99.51
3hm2_A178 Precorrin-6Y C5,15-methyltransferase; alpha-beta-s 99.5
2ift_A201 Putative methylase HI0767; NESG, Y767_haein, struc 99.5
3r3h_A242 O-methyltransferase, SAM-dependent; structural gen 99.49
3u81_A221 Catechol O-methyltransferase; neurotransmitter deg 99.49
3tr6_A225 O-methyltransferase; cellular processes; HET: SAH; 99.49
2esr_A177 Methyltransferase; structural genomics, hypothetic 99.48
4dzr_A215 Protein-(glutamine-N5) methyltransferase, release 99.48
3njr_A204 Precorrin-6Y methylase; methyltransferase, decarbo 99.48
3cbg_A232 O-methyltransferase; cyanobacterium; HET: SAH FER 99.47
2avd_A229 Catechol-O-methyltransferase; structural genomics, 99.46
2b78_A385 Hypothetical protein SMU.776; structure genomics, 99.46
2fhp_A187 Methylase, putative; alpha-beta-alpha sandwich, st 99.46
3evz_A230 Methyltransferase; NYSGXRC, NEW YORK SGX research 99.45
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 99.45
2fpo_A202 Methylase YHHF; structural genomics, putative meth 99.45
1nt2_A210 Fibrillarin-like PRE-rRNA processing protein; adeM 99.45
3dtn_A234 Putative methyltransferase MM_2633; structural gen 99.45
3eey_A197 Putative rRNA methylase; rRNA methylation, S-adeno 99.45
2hnk_A239 SAM-dependent O-methyltransferase; modified rossma 99.44
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 99.44
3mb5_A255 SAM-dependent methyltransferase; RNA methyltransfe 99.43
1g8a_A227 Fibrillarin-like PRE-rRNA processing protein; rRNA 99.43
2b3t_A276 Protein methyltransferase HEMK; translation termin 99.43
2vdv_E246 TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl 99.43
2gb4_A252 Thiopurine S-methyltransferase; 18204406, thiopuri 99.42
1jsx_A207 Glucose-inhibited division protein B; methyltransf 99.42
1pjz_A203 Thiopurine S-methyltransferase; polymorphism, S-ad 99.42
3dlc_A219 Putative S-adenosyl-L-methionine-dependent methylt 99.42
1ws6_A171 Methyltransferase; structural genomics, riken stru 99.42
2frn_A278 Hypothetical protein PH0793; structural genomics, 99.42
1fbn_A230 MJ fibrillarin homologue; MJ proteins, ribosomal R 99.41
3ofk_A216 Nodulation protein S; NODS, N-methyltransferase, S 99.41
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 99.41
3hem_A302 Cyclopropane-fatty-acyl-phospholipid synthase 2; p 99.41
3f4k_A257 Putative methyltransferase; structural genomics, P 99.4
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 99.4
2gpy_A233 O-methyltransferase; structural genomics, PSI, pro 99.39
3dli_A240 Methyltransferase; PSI-II, NYSGXRC, structural gen 99.39
3grz_A205 L11 mtase, ribosomal protein L11 methyltransferase 99.38
1l3i_A192 Precorrin-6Y methyltransferase/putative decarboxyl 99.38
2yxd_A183 Probable cobalt-precorrin-6Y C(15)-methyltransfer 99.38
3mgg_A276 Methyltransferase; NYSGXRC, PSI-II, protein struct 99.38
3g07_A292 7SK snRNA methylphosphate capping enzyme; structur 99.38
1vl5_A260 Unknown conserved protein BH2331; putative methylt 99.37
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 99.37
4htf_A285 S-adenosylmethionine-dependent methyltransferase; 99.37
4dmg_A393 Putative uncharacterized protein TTHA1493; rRNA, m 99.37
3a27_A272 TYW2, uncharacterized protein MJ1557; wybutosine m 99.37
3lbf_A210 Protein-L-isoaspartate O-methyltransferase; modifi 99.37
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 99.37
2bm8_A236 Cephalosporin hydroxylase CMCI; cephamycin biosynt 99.37
2ex4_A241 Adrenal gland protein AD-003; methyltransferase, s 99.36
3ajd_A274 Putative methyltransferase MJ0026; tRNA, M5C, ross 99.36
1nv8_A284 HEMK protein; class I adoMet-dependent methyltrans 99.36
3gu3_A284 Methyltransferase; alpha-beta protein, structural 99.36
3g5l_A253 Putative S-adenosylmethionine dependent methyltran 99.36
3hnr_A220 Probable methyltransferase BT9727_4108; structural 99.36
2p7i_A250 Hypothetical protein; putative methyltransferase, 99.35
2vdw_A302 Vaccinia virus capping enzyme D1 subunit; nucleoti 99.35
2xvm_A199 Tellurite resistance protein TEHB; antibiotic resi 99.35
3g5t_A299 Trans-aconitate 3-methyltransferase; structural ge 99.35
3dh0_A219 SAM dependent methyltransferase; cystal structure, 99.34
2b25_A336 Hypothetical protein; structural genomics, methyl 99.34
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 99.34
4df3_A233 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 99.34
3e8s_A227 Putative SAM dependent methyltransferase; NP_74470 99.34
1wxx_A382 TT1595, hypothetical protein TTHA1280; thermus the 99.34
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 99.34
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 99.33
1kpg_A287 CFA synthase;, cyclopropane-fatty-acyl-phospholipi 99.33
3c0k_A396 UPF0064 protein YCCW; PUA domain, adoMet dependent 99.33
2as0_A396 Hypothetical protein PH1915; RNA methyltransferase 99.33
2p35_A259 Trans-aconitate 2-methyltransferase; SAM dependent 99.33
1yb2_A275 Hypothetical protein TA0852; structural genomics, 99.33
1xxl_A239 YCGJ protein; structural genomics, protein structu 99.32
2pwy_A258 TRNA (adenine-N(1)-)-methyltransferase; mtase, ado 99.32
3dmg_A381 Probable ribosomal RNA small subunit methyltransf; 99.32
3lcc_A235 Putative methyl chloride transferase; halide methy 99.32
3v97_A703 Ribosomal RNA large subunit methyltransferase L; Y 99.32
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 99.31
2yqz_A263 Hypothetical protein TTHA0223; RNA methyltransfera 99.31
3dou_A191 Ribosomal RNA large subunit methyltransferase J; c 99.31
1o54_A277 SAM-dependent O-methyltransferase; TM0748, structu 99.31
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 99.31
3k6r_A278 Putative transferase PH0793; structural genomics, 99.31
3pfg_A263 N-methyltransferase; N,N-dimethyltransferase, SAM 99.31
2nxc_A254 L11 mtase, ribosomal protein L11 methyltransferase 99.3
2pxx_A215 Uncharacterized protein MGC2408; structural genomi 99.3
3d2l_A243 SAM-dependent methyltransferase; ZP_00538691.1, st 99.3
3bkw_A243 MLL3908 protein, S-adenosylmethionine dependent me 99.3
3m70_A286 Tellurite resistance protein TEHB homolog; structu 99.3
2yvl_A248 TRMI protein, hypothetical protein; tRNA, methyltr 99.3
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 99.3
3ggd_A245 SAM-dependent methyltransferase; YP_325210.1, stru 99.3
4fsd_A 383 Arsenic methyltransferase; rossmann fold; 1.75A {C 99.3
2ipx_A233 RRNA 2'-O-methyltransferase fibrillarin; FBL, stru 99.3
1ej0_A180 FTSJ; methyltransferase, adoMet, adenosyl methioni 99.3
2fk8_A318 Methoxy mycolic acid synthase 4; S-adenosylmethion 99.3
3tma_A354 Methyltransferase; thump domain; 2.05A {Thermus th 99.3
1wzn_A252 SAM-dependent methyltransferase; structural genomi 99.29
3kr9_A225 SAM-dependent methyltransferase; class I rossmann- 99.29
3vc1_A312 Geranyl diphosphate 2-C-methyltransferase; rossman 99.29
3l8d_A242 Methyltransferase; structural genomics, PSI, nysgr 99.29
2pjd_A343 Ribosomal RNA small subunit methyltransferase C; g 99.29
1ixk_A315 Methyltransferase; open beta sheet; 1.90A {Pyrococ 99.29
2qm3_A373 Predicted methyltransferase; putative methyltransf 99.29
3sm3_A235 SAM-dependent methyltransferases; NESG, structural 99.29
3ocj_A305 Putative exported protein; structural genomics, PS 99.28
3p2e_A225 16S rRNA methylase; methyltransferase, transferase 99.28
3ccf_A279 Cyclopropane-fatty-acyl-phospholipid synthase; YP_ 99.28
2p8j_A209 S-adenosylmethionine-dependent methyltransferase; 99.28
3gnl_A244 Uncharacterized protein, DUF633, LMOF2365_1472; st 99.28
1ri5_A298 MRNA capping enzyme; methyltransferase, M7G, messe 99.27
3thr_A293 Glycine N-methyltransferase; GNMT, folate, methylt 99.27
3lec_A230 NADB-rossmann superfamily protein; PSI, MCSG, stru 99.27
3uwp_A438 Histone-lysine N-methyltransferase, H3 lysine-79; 99.27
2yx1_A336 Hypothetical protein MJ0883; methyl transferase, t 99.26
2qe6_A274 Uncharacterized protein TFU_2867; putative methylt 99.26
3q7e_A349 Protein arginine N-methyltransferase 1; HET: SAH; 99.26
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 99.26
3g2m_A299 PCZA361.24; SAM-dependent methyltransferase, glyco 99.26
2plw_A201 Ribosomal RNA methyltransferase, putative; malaria 99.26
2yxe_A215 Protein-L-isoaspartate O-methyltransferase; rossma 99.26
3r0q_C 376 Probable protein arginine N-methyltransferase 4.2; 99.26
2fyt_A340 Protein arginine N-methyltransferase 3; structural 99.26
2kw5_A202 SLR1183 protein; structural genomics, northeast st 99.26
1dl5_A317 Protein-L-isoaspartate O-methyltransferase; isoasp 99.26
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 99.25
1i9g_A280 Hypothetical protein RV2118C; mtase, adoMet, cryst 99.25
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 99.25
2pbf_A227 Protein-L-isoaspartate O-methyltransferase beta-A 99.25
3i9f_A170 Putative type 11 methyltransferase; structural gen 99.25
1o9g_A250 RRNA methyltransferase; antibiotic resistance, Se- 99.25
3gdh_A241 Trimethylguanosine synthase homolog; M7G, CAP, dim 99.24
1wy7_A207 Hypothetical protein PH1948; seven-stranded beta s 99.24
3id6_C232 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 99.24
1i1n_A226 Protein-L-isoaspartate O-methyltransferase; S-aden 99.24
3bxo_A239 N,N-dimethyltransferase; desosamine, sugar, carboh 99.23
1r18_A227 Protein-L-isoaspartate(D-aspartate)-O-methyltrans; 99.23
3m6w_A 464 RRNA methylase; rRNA methyltransferase, 5-methylcy 99.22
1vbf_A231 231AA long hypothetical protein-L-isoaspartate O- 99.22
3m33_A226 Uncharacterized protein; structural genomics, PSI- 99.22
1ne2_A200 Hypothetical protein TA1320; structural genomics, 99.22
3dp7_A363 SAM-dependent methyltransferase; structural genomi 99.21
1jg1_A235 PIMT;, protein-L-isoaspartate O-methyltransferase; 99.21
3q87_B170 N6 adenine specific DNA methylase; SAM-methyltrans 99.21
1u2z_A433 Histone-lysine N-methyltransferase, H3 lysine-79 s 99.21
3bgv_A313 MRNA CAP guanine-N7 methyltransferase; alternative 99.2
2y1w_A 348 Histone-arginine methyltransferase CARM1; histone 99.2
2qy6_A257 UPF0209 protein YFCK; structural genomics, unknown 99.2
3fzg_A200 16S rRNA methylase; methyltransferase, plasmid, tr 99.2
2avn_A260 Ubiquinone/menaquinone biosynthesis methyltransfe 99.19
2gs9_A211 Hypothetical protein TT1324; methyl transferase, s 99.19
2h00_A254 Methyltransferase 10 domain containing protein; st 99.19
3m4x_A 456 NOL1/NOP2/SUN family protein; mtase domain, PUA do 99.19
3iv6_A261 Putative Zn-dependent alcohol dehydrogenase; alpha 99.19
4hc4_A 376 Protein arginine N-methyltransferase 6; HRMT1L6, S 99.19
2aot_A292 HMT, histamine N-methyltransferase; classic methyl 99.19
2frx_A 479 Hypothetical protein YEBU; rossmann-type S-adenosy 99.18
3cc8_A230 Putative methyltransferase; structural genomics, j 99.18
2nyu_A196 Putative ribosomal RNA methyltransferase 2; SAM, s 99.18
2wa2_A276 Non-structural protein 5; transferase, S-adenosyl- 99.18
3mq2_A218 16S rRNA methyltransferase; methyltranferase, ribo 99.17
2yxl_A450 PH0851 protein, 450AA long hypothetical FMU protei 99.17
2i62_A265 Nicotinamide N-methyltransferase; structural genom 99.17
2a14_A263 Indolethylamine N-methyltransferase; SGC,INMT, str 99.17
1g6q_1 328 HnRNP arginine N-methyltransferase; SAM-binding do 99.16
2dul_A 378 N(2),N(2)-dimethylguanosine tRNA methyltransferas; 99.16
1sqg_A429 SUN protein, FMU protein; rossmann-fold, mixed bet 99.16
3axs_A 392 Probable N(2),N(2)-dimethylguanosine tRNA methylt 99.15
1p91_A269 Ribosomal RNA large subunit methyltransferase A; R 99.15
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 99.14
3i53_A332 O-methyltransferase; CO-complex, rossmann-like fol 99.14
3bkx_A275 SAM-dependent methyltransferase; YP_807781.1, cycl 99.14
3ege_A261 Putative methyltransferase from antibiotic biosyn 99.14
2oxt_A265 Nucleoside-2'-O-methyltransferase; flavivirus, vir 99.13
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 99.13
3hp7_A291 Hemolysin, putative; structural genomics, APC64019 99.12
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 99.12
3sso_A419 Methyltransferase; macrolide, natural product, ros 99.11
2ip2_A334 Probable phenazine-specific methyltransferase; pyo 99.1
3bt7_A369 TRNA (uracil-5-)-methyltransferase; methyluridine, 99.09
2g72_A289 Phenylethanolamine N-methyltransferase; HET: SAM F 99.09
3bzb_A281 Uncharacterized protein; RED ALGA, protein structu 99.09
1x19_A359 CRTF-related protein; methyltransferase, bacterioc 99.08
1tw3_A360 COMT, carminomycin 4-O-methyltransferase; anthracy 99.08
2r3s_A335 Uncharacterized protein; methyltransferase domain, 99.08
2p41_A305 Type II methyltransferase; vizier, viral enzymes i 99.08
3b3j_A 480 Histone-arginine methyltransferase CARM1; protein 99.06
2ih2_A 421 Modification methylase TAQI; DNA, DNA methyltransf 99.05
2f8l_A344 Hypothetical protein LMO1582; structural genomics, 99.05
3cvo_A202 Methyltransferase-like protein of unknown functio; 99.04
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 99.04
3tm4_A373 TRNA (guanine N2-)-methyltransferase TRM14; rossma 99.03
1uwv_A433 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m 99.03
1vlm_A219 SAM-dependent methyltransferase; possible histamin 99.01
2jjq_A425 Uncharacterized RNA methyltransferase pyrab10780; 99.01
3lcv_B281 Sisomicin-gentamicin resistance methylase SGM; ant 99.0
4a6d_A353 Hydroxyindole O-methyltransferase; melatonin, circ 98.99
3giw_A277 Protein of unknown function DUF574; rossmann-fold 98.98
3lst_A348 CALO1 methyltransferase; calicheamicin, enediyne, 98.97
1af7_A274 Chemotaxis receptor methyltransferase CHER; chemot 98.96
3opn_A232 Putative hemolysin; structural genomics, PSI-2, pr 98.96
2xyq_A290 Putative 2'-O-methyl transferase; transferase-vira 98.95
3reo_A368 (ISO)eugenol O-methyltransferase; directed evoluti 98.94
4e2x_A 416 TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s 98.93
2b9e_A309 NOL1/NOP2/SUN domain family, member 5 isoform 2; m 98.93
1zq9_A285 Probable dimethyladenosine transferase; SGC, struc 98.91
3p9c_A364 Caffeic acid O-methyltransferase; S-adenosylmethio 98.91
1fp1_D372 Isoliquiritigenin 2'-O-methyltransferase; protein- 98.91
1fp2_A352 Isoflavone O-methyltransferase; protein-product co 98.91
4azs_A 569 Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 98.88
3ldg_A384 Putative uncharacterized protein SMU.472; YPSC, me 98.87
2zfu_A215 Nucleomethylin, cerebral protein 1; nucleolar prot 98.85
3k0b_A393 Predicted N6-adenine-specific DNA methylase; methy 98.85
3ldu_A385 Putative methylase; structural genomics, PSI-2, pr 98.85
2okc_A445 Type I restriction enzyme stysji M protein; NP_813 98.82
2h1r_A299 Dimethyladenosine transferase, putative; SGC toron 98.82
3gru_A295 Dimethyladenosine transferase; rossman fold, ribos 98.82
3frh_A253 16S rRNA methylase; methyltransferase domain, heli 98.81
3fut_A271 Dimethyladenosine transferase; methyltransferase, 98.81
1m6y_A301 S-adenosyl-methyltransferase MRAW; SAM-dependent m 98.79
3ll7_A 410 Putative methyltransferase; methytransferase, stru 98.77
1zg3_A358 Isoflavanone 4'-O-methyltransferase; rossman fold, 98.74
2r6z_A258 UPF0341 protein in RSP 3' region; alpha-beta prote 98.73
1qam_A244 ERMC' methyltransferase; rRNA methyltransferase ER 98.72
3tqs_A255 Ribosomal RNA small subunit methyltransferase A; p 98.71
2wk1_A282 NOVP; transferase, O-methyltransferase, novobiocin 98.69
2oyr_A258 UPF0341 protein YHIQ; alpha-beta protein, structur 98.66
1yub_A245 Ermam, rRNA methyltransferase; MLS antibiotics; NM 98.66
3lkd_A 542 Type I restriction-modification system methyltrans 98.66
4fzv_A359 Putative methyltransferase NSUN4; mterf fold, meth 98.65
2ar0_A 541 M.ecoki, type I restriction enzyme ecoki M protein 98.65
2ld4_A176 Anamorsin; methyltransferase-like fold, alpha/beta 98.65
3khk_A544 Type I restriction-modification system methylation 98.62
3ftd_A249 Dimethyladenosine transferase; KSGA, rossmann-like 98.61
3vyw_A308 MNMC2; tRNA wobble uridine, modification enzyme, g 98.59
2oo3_A283 Protein involved in catabolism of external DNA; st 98.57
3v97_A 703 Ribosomal RNA large subunit methyltransferase L; Y 98.57
3s1s_A 878 Restriction endonuclease bpusi; PD--(D/E)XK cataly 98.56
3evf_A277 RNA-directed RNA polymerase NS5; NS5 methyltransfe 98.53
3gcz_A282 Polyprotein; flavivirus, RNA capping, methyltransf 98.43
3ua3_A 745 Protein arginine N-methyltransferase 5; TIM-barrel 98.39
4gqb_A637 Protein arginine N-methyltransferase 5; TIM barrel 98.38
3uzu_A279 Ribosomal RNA small subunit methyltransferase A; s 98.37
1qyr_A252 KSGA, high level kasugamycin resistance protein, S 98.36
3eld_A300 Methyltransferase; flavivirus, RNA capping, guanyl 98.34
3r24_A344 NSP16, 2'-O-methyl transferase; methyltransferase, 98.19
1wg8_A285 Predicted S-adenosylmethionine-dependent methyltra 98.17
2px2_A269 Genome polyprotein [contains: capsid protein C (co 98.02
3ps9_A 676 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 97.96
3p8z_A267 Mtase, non-structural protein 5; methyltransferase 97.95
3pvc_A 689 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 97.89
3lkz_A321 Non-structural protein 5; flavivirus, methyltransf 97.84
3ufb_A530 Type I restriction-modification system methyltran 97.84
4auk_A375 Ribosomal RNA large subunit methyltransferase M; Y 97.72
2efj_A384 3,7-dimethylxanthine methyltransferase; SAM-depend 97.67
3b5i_A374 S-adenosyl-L-methionine:salicylic acid carboxyl me 97.64
3tos_A257 CALS11; methyltransferase, calicheamicin, structur 97.56
1i4w_A 353 Mitochondrial replication protein MTF1; mitochondr 97.47
1m6e_X359 S-adenosyl-L-methionnine:salicylic acid carboxyl m 97.46
3tka_A347 Ribosomal RNA small subunit methyltransferase H; H 97.34
1g55_A 343 DNA cytosine methyltransferase DNMT2; human DNA me 97.3
2c7p_A 327 Modification methylase HHAI; DNA methyltransferase 97.22
2k4m_A153 TR8_protein, UPF0146 protein MTH_1000; alpha+beta, 97.15
2zig_A297 TTHA0409, putative modification methylase; methylt 97.1
3g7u_A 376 Cytosine-specific methyltransferase; DNA-binding, 97.06
1f8f_A371 Benzyl alcohol dehydrogenase; rossmann fold, oxido 96.88
1boo_A 323 Protein (N-4 cytosine-specific methyltransferase P 96.84
1pl8_A356 Human sorbitol dehydrogenase; NAD, oxidoreductase; 96.66
3m6i_A363 L-arabinitol 4-dehydrogenase; medium chain dehydro 96.64
4ej6_A370 Putative zinc-binding dehydrogenase; structural ge 96.63
3s2e_A340 Zinc-containing alcohol dehydrogenase superfamily; 96.62
3fpc_A352 NADP-dependent alcohol dehydrogenase; oxydoreducta 96.56
3ubt_Y 331 Modification methylase HAEIII; protein-DNA complex 96.53
4h0n_A 333 DNMT2; SAH binding, transferase; HET: SAH; 2.71A { 96.5
1eg2_A 319 Modification methylase RSRI; rossmann fold, exocyc 96.49
2zig_A 297 TTHA0409, putative modification methylase; methylt 96.48
1g60_A 260 Adenine-specific methyltransferase MBOIIA; structu 96.45
3qv2_A 327 5-cytosine DNA methyltransferase; DNMT2, ehmeth; H 96.41
2dph_A398 Formaldehyde dismutase; dismutation of aldehydes, 96.37
3uko_A378 Alcohol dehydrogenase class-3; alcohol dehydrogena 96.34
1pqw_A198 Polyketide synthase; rossmann fold, dimer, structu 96.23
3jv7_A345 ADH-A; dehydrogenase, nucleotide binding, rossmann 96.18
4eez_A348 Alcohol dehydrogenase 1; site-saturation mutagenes 96.16
2jhf_A374 Alcohol dehydrogenase E chain; oxidoreductase, met 96.08
4b7c_A336 Probable oxidoreductase; NADP cofactor, rossmann f 96.07
1p0f_A373 NADP-dependent alcohol dehydrogenase; ADH topology 96.06
1cdo_A374 Alcohol dehydrogenase; oxidoreductase, oxidoreduct 96.06
4dvj_A363 Putative zinc-dependent alcohol dehydrogenase Pro; 96.02
3ip1_A404 Alcohol dehydrogenase, zinc-containing; structural 96.01
1g60_A260 Adenine-specific methyltransferase MBOIIA; structu 96.0
4a2c_A346 Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc 96.0
1e3i_A376 Alcohol dehydrogenase, class II; HET: NAD; 2.08A { 95.99
1e3j_A352 NADP(H)-dependent ketose reductase; oxidoreductase 95.94
2fzw_A373 Alcohol dehydrogenase class III CHI chain; S-nitro 95.92
2b5w_A357 Glucose dehydrogenase; nucleotide binding motif, o 95.89
1uuf_A369 YAHK, zinc-type alcohol dehydrogenase-like protein 95.86
1kol_A398 Formaldehyde dehydrogenase; oxidoreductase; HET: N 95.85
3me5_A 482 Cytosine-specific methyltransferase; structural ge 95.79
1v3u_A333 Leukotriene B4 12- hydroxydehydrogenase/prostaglan 95.74
1vj0_A380 Alcohol dehydrogenase, zinc-containing; TM0436, st 95.7
3uog_A363 Alcohol dehydrogenase; structural genomics, protei 95.63
2c0c_A362 Zinc binding alcohol dehydrogenase, domain contain 95.59
2d8a_A348 PH0655, probable L-threonine 3-dehydrogenase; pyro 95.54
2j3h_A345 NADP-dependent oxidoreductase P1; double bond redu 95.49
3two_A348 Mannitol dehydrogenase; cinnamyl-alcohol dehydroge 95.45
2dq4_A343 L-threonine 3-dehydrogenase; NAD-dependent, oxidor 95.44
3gms_A340 Putative NADPH:quinone reductase; structural genom 95.33
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 95.32
3qwb_A334 Probable quinone oxidoreductase; rossmann fold, qu 95.32
4eye_A342 Probable oxidoreductase; structural genomics, niai 95.27
3swr_A 1002 DNA (cytosine-5)-methyltransferase 1; epigenetics, 95.26
3fbg_A346 Putative arginate lyase; structural genomics, unkn 95.23
2zb4_A357 Prostaglandin reductase 2; rossmann fold, alternat 95.22
2h6e_A344 ADH-4, D-arabinose 1-dehydrogenase; rossman fold, 95.17
1rjw_A339 ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD 95.13
2hcy_A347 Alcohol dehydrogenase 1; tetramer of asymmetric di 95.08
3jyn_A325 Quinone oxidoreductase; rossmann fold, protein-NAD 95.06
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 94.9
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 94.87
2cf5_A357 Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign 94.84
4dup_A353 Quinone oxidoreductase; PSI-biology, structural ge 94.81
1yqd_A366 Sinapyl alcohol dehydrogenase; lignin, monolignol, 94.8
2eih_A343 Alcohol dehydrogenase; zinc ION binding protein, s 94.66
1jvb_A347 NAD(H)-dependent alcohol dehydrogenase; archaeon, 94.59
1wly_A333 CAAR, 2-haloacrylate reductase; NADPH-dependent ox 94.5
3gaz_A343 Alcohol dehydrogenase superfamily protein; oxidore 94.47
1piw_A360 Hypothetical zinc-type alcohol dehydrogenase- like 94.34
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 94.32
1iz0_A302 Quinone oxidoreductase; APO-enzyme, riken structur 94.28
2qrv_A295 DNA (cytosine-5)-methyltransferase 3A; DNA methylt 94.25
1yb5_A351 Quinone oxidoreductase; medium-chain dehydrogenase 94.12
1qor_A327 Quinone oxidoreductase; HET: NAP; 2.20A {Escherich 94.1
2j8z_A354 Quinone oxidoreductase; medium-chain dehydrogenase 94.1
3goh_A315 Alcohol dehydrogenase, zinc-containing; NP_718042. 94.09
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 93.9
2cdc_A366 Glucose dehydrogenase glucose 1-dehydrogenase, DHG 93.86
3gqv_A371 Enoyl reductase; medium-chain reductase (MDR super 93.81
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 93.65
3l9w_A 413 Glutathione-regulated potassium-efflux system Pro 93.58
1boo_A323 Protein (N-4 cytosine-specific methyltransferase P 93.51
3nx4_A324 Putative oxidoreductase; csgid, structural genomic 93.49
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 93.09
3av4_A 1330 DNA (cytosine-5)-methyltransferase 1; CXXC-type zi 93.08
3iht_A174 S-adenosyl-L-methionine methyl transferase; YP_165 93.0
1xa0_A328 Putative NADPH dependent oxidoreductases; structur 92.96
4ft4_B 784 DNA (cytosine-5)-methyltransferase 1; chromodomain 92.86
1id1_A153 Putative potassium channel protein; RCK domain, E. 92.86
2y0c_A 478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 92.59
2py6_A409 Methyltransferase FKBM; YP_546752.1, structural ge 92.56
3ggo_A 314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 92.51
4a27_A349 Synaptic vesicle membrane protein VAT-1 homolog-L; 92.45
3krt_A456 Crotonyl COA reductase; structural genomics, prote 92.42
3c85_A183 Putative glutathione-regulated potassium-efflux S 92.4
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 92.37
4a0s_A447 Octenoyl-COA reductase/carboxylase; oxidoreductase 92.07
2vn8_A375 Reticulon-4-interacting protein 1; mitochondrion, 91.85
3dfz_A223 SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase 91.82
4dkj_A 403 Cytosine-specific methyltransferase; CG-specificit 91.78
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 91.59
3oig_A266 Enoyl-[acyl-carrier-protein] reductase [NADH]; fat 91.56
3gg2_A 450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 91.56
1zcj_A 463 Peroxisomal bifunctional enzyme; peroxisomal multi 91.35
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 91.24
2o3j_A 481 UDP-glucose 6-dehydrogenase; structural genomics, 91.04
1lss_A140 TRK system potassium uptake protein TRKA homolog; 91.03
3tqh_A321 Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella 90.76
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 90.69
3ado_A 319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 90.55
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 90.45
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 90.44
3o38_A266 Short chain dehydrogenase; tuberculosis, ortholog 90.13
3grk_A293 Enoyl-(acyl-carrier-protein) reductase (NADH); ssg 90.13
4a7p_A 446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 90.05
1tt7_A330 YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st 89.86
3guy_A230 Short-chain dehydrogenase/reductase SDR; structura 89.62
1rjd_A334 PPM1P, carboxy methyl transferase for protein phos 89.32
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 89.23
1eg2_A319 Modification methylase RSRI; rossmann fold, exocyc 89.21
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 89.19
2hwk_A320 Helicase NSP2; rossman fold, alpha/beta/alpha, mul 88.81
1h2b_A359 Alcohol dehydrogenase; oxidoreductase, archaea, hy 88.67
3ce6_A494 Adenosylhomocysteinase; protein-substrate complex, 88.53
3lyl_A247 3-oxoacyl-(acyl-carrier-protein) reductase; alpha 88.4
3imf_A257 Short chain dehydrogenase; structural genomics, in 88.33
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 88.3
3mog_A 483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 88.27
2uyo_A310 Hypothetical protein ML2640; putative methyltransf 88.18
3eod_A130 Protein HNR; response regulator, phosphoprotein, t 88.11
1zej_A 293 HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural 88.1
4dcm_A 375 Ribosomal RNA large subunit methyltransferase G; 2 88.09
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 88.03
1wma_A276 Carbonyl reductase [NADPH] 1; oxidoreductase; HET: 87.99
2dpo_A 319 L-gulonate 3-dehydrogenase; structural genomics, N 87.91
4e7p_A150 Response regulator; DNA binding, cytosol, transcri 87.78
3pi7_A349 NADH oxidoreductase; groes-like fold, NAD(P)-bindi 87.58
3ijr_A291 Oxidoreductase, short chain dehydrogenase/reducta; 87.48
1mv8_A 436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 87.4
3pxx_A287 Carveol dehydrogenase; structural genomics, seattl 87.38
3k96_A 356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 87.36
3pk0_A262 Short-chain dehydrogenase/reductase SDR; ssgcid, s 87.3
3zwc_A 742 Peroxisomal bifunctional enzyme; beta oxidation pa 87.29
3o26_A 311 Salutaridine reductase; short chain dehydrogenase/ 87.19
2q3e_A 467 UDP-glucose 6-dehydrogenase; hexamer, structural g 87.12
3rih_A293 Short chain dehydrogenase or reductase; structural 86.98
3f1l_A252 Uncharacterized oxidoreductase YCIK; E. coli, NADP 86.94
3dqp_A219 Oxidoreductase YLBE; alpha-beta protein., structur 86.89
4fn4_A254 Short chain dehydrogenase; NADH-binding, rossmann 86.77
3sju_A279 Keto reductase; short-chain dehydrogenase, oxidore 86.69
3h7a_A252 Short chain dehydrogenase; oxidoreductase, PSI-2, 86.44
3tjr_A301 Short chain dehydrogenase; structural genomics, se 86.42
2rir_A300 Dipicolinate synthase, A chain; structural genomic 86.31
3cea_A 346 MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore 86.17
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 86.17
3i1j_A247 Oxidoreductase, short chain dehydrogenase/reducta; 86.16
1dlj_A 402 UDP-glucose dehydrogenase; rossmann fold, ternary 86.04
1zkd_A 387 DUF185; NESG, RPR58, structural genomics, PSI, pro 86.03
4e21_A 358 6-phosphogluconate dehydrogenase (decarboxylating; 86.03
1lnq_A336 MTHK channels, potassium channel related protein; 85.88
3pqe_A 326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 85.63
1zsy_A357 Mitochondrial 2-enoyl thioester reductase; medium- 85.61
3kht_A144 Response regulator; PSI-II, 11023K, structural gen 85.56
3ucx_A264 Short chain dehydrogenase; ssgcid, seattle structu 85.53
4g65_A461 TRK system potassium uptake protein TRKA; structur 85.49
3ged_A247 Short-chain dehydrogenase/reductase SDR; SCOR, ros 85.31
4fs3_A256 Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; 85.25
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 85.24
3rkr_A262 Short chain oxidoreductase; rossmann fold; HET: NA 85.11
3kto_A136 Response regulator receiver protein; PSI-II,struct 85.03
3k31_A296 Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI 85.03
3r1i_A276 Short-chain type dehydrogenase/reductase; structur 85.02
3lf2_A265 Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross 84.97
4egf_A266 L-xylulose reductase; structural genomics, ssgcid, 84.89
4e6p_A259 Probable sorbitol dehydrogenase (L-iditol 2-dehyd; 84.57
1yb1_A272 17-beta-hydroxysteroid dehydrogenase type XI; shor 84.52
4fc7_A277 Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman 84.49
3svt_A281 Short-chain type dehydrogenase/reductase; ssgcid, 84.48
3ioy_A 319 Short-chain dehydrogenase/reductase SDR; structura 84.44
3is3_A270 17BETA-hydroxysteroid dehydrogenase; short chain d 84.43
3trk_A324 Nonstructural polyprotein; hydrolase; 2.40A {Chiku 84.27
4eso_A255 Putative oxidoreductase; NADP, structural genomics 84.23
3tfo_A264 Putative 3-oxoacyl-(acyl-carrier-protein) reducta; 84.22
3t4x_A267 Oxidoreductase, short chain dehydrogenase/reducta; 84.16
1ae1_A273 Tropinone reductase-I; oxidoreductase, tropane alk 84.15
3pid_A 432 UDP-glucose 6-dehydrogenase; rossmann fold, oxidor 84.1
3t8y_A164 CHEB, chemotaxis response regulator protein-glutam 84.08
3lua_A140 Response regulator receiver protein; two-component 84.08
4g81_D255 Putative hexonate dehydrogenase; enzyme function i 84.07
3cz5_A153 Two-component response regulator, LUXR family; str 83.9
3l77_A235 Short-chain alcohol dehydrogenase; oxidoreductase; 83.89
3ilh_A146 Two component response regulator; NYSGXRC, PSI-II, 83.88
2km1_A136 Protein DRE2; yeast, antiapoptotic, protein bindin 83.8
3v2h_A281 D-beta-hydroxybutyrate dehydrogenase; structural g 83.71
4ibo_A271 Gluconate dehydrogenase; enzyme function initiativ 83.58
3h2s_A224 Putative NADH-flavin reductase; Q03B84, NESG, LCR1 83.57
3hv2_A153 Response regulator/HD domain protein; PSI-2, NYSGX 83.55
1zh8_A 340 Oxidoreductase; TM0312, structural genomics, JO ce 83.52
3d0o_A 317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 83.43
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=3.7e-53  Score=390.29  Aligned_cols=237  Identities=36%  Similarity=0.692  Sum_probs=217.9

Q ss_pred             cccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCC
Q 020933           48 SVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNP  127 (319)
Q Consensus        48 ~~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~  127 (319)
                      +.+.+||+++.   +|..+.|+++++|++++|+||+|.|+++..+|++|+|||.+|++++||+.|||||+|+|++.+++|
T Consensus         8 ~~~~~w~e~~~---~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~p   84 (294)
T 3o4f_A            8 AEKKQWHETLH---DQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHA   84 (294)
T ss_dssp             --CEEEECCSS---SSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCC
T ss_pred             ccccceeeecc---CCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCC
Confidence            46678998876   677889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccC-CCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933          128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV  206 (319)
Q Consensus       128 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~  206 (319)
                      ++||+||+|+|++++++++++++++|++||||++|+++|+++|+..+. .++++|++++++|+++|++.. .++||+||+
T Consensus        85 k~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~  163 (294)
T 3o4f_A           85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIIS  163 (294)
T ss_dssp             CEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEE
T ss_pred             CeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEE
Confidence            999999999999999999999899999999999999999999987543 368899999999999999865 789999999


Q ss_pred             cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEE
Q 020933          207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSC  284 (319)
Q Consensus       207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~  284 (319)
                      |+++|.+++..|++.+||+.++++|+|||++++|+++++.+.+.+..+.++++++| ..+.++...||+||+|.|  ++|
T Consensus       164 D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F-~~v~~~~~~vPty~~g~w~f~~a  242 (294)
T 3o4f_A          164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF-SDVGFYQAAIPTYYGGIMTFAWA  242 (294)
T ss_dssp             SCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHC-SEEEEEEECCTTSSSSCEEEEEE
T ss_pred             eCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhC-CceeeeeeeeccCCCcceeheeE
Confidence            99999999999999999999999999999999999999999999999999999999 578889999999999988  889


Q ss_pred             EcCCC
Q 020933          285 SAVNS  289 (319)
Q Consensus       285 S~~~~  289 (319)
                      |++..
T Consensus       243 s~~~~  247 (294)
T 3o4f_A          243 TDNDA  247 (294)
T ss_dssp             ESCTT
T ss_pred             ECCCc
Confidence            98744
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A Back     alignment and structure
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A* Back     alignment and structure
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* Back     alignment and structure
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* Back     alignment and structure
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 Back     alignment and structure
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 Back     alignment and structure
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* Back     alignment and structure
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* Back     alignment and structure
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* Back     alignment and structure
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* Back     alignment and structure
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* Back     alignment and structure
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A Back     alignment and structure
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Back     alignment and structure
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* Back     alignment and structure
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} Back     alignment and structure
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 Back     alignment and structure
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} Back     alignment and structure
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 Back     alignment and structure
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} Back     alignment and structure
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* Back     alignment and structure
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} Back     alignment and structure
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* Back     alignment and structure
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 Back     alignment and structure
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Back     alignment and structure
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} Back     alignment and structure
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} Back     alignment and structure
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} Back     alignment and structure
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Back     alignment and structure
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} Back     alignment and structure
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 Back     alignment and structure
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* Back     alignment and structure
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 Back     alignment and structure
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Back     alignment and structure
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* Back     alignment and structure
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} Back     alignment and structure
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 Back     alignment and structure
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} Back     alignment and structure
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... Back     alignment and structure
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 Back     alignment and structure
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 Back     alignment and structure
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} Back     alignment and structure
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} Back     alignment and structure
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 Back     alignment and structure
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* Back     alignment and structure
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 Back     alignment and structure
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Back     alignment and structure
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 Back     alignment and structure
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Back     alignment and structure
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} Back     alignment and structure
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Back     alignment and structure
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* Back     alignment and structure
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A Back     alignment and structure
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* Back     alignment and structure
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E Back     alignment and structure
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* Back     alignment and structure
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 Back     alignment and structure
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 Back     alignment and structure
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} Back     alignment and structure
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 Back     alignment and structure
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* Back     alignment and structure
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A Back     alignment and structure
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Back     alignment and structure
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Back     alignment and structure
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} Back     alignment and structure
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} Back     alignment and structure
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* Back     alignment and structure
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Back     alignment and structure
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} Back     alignment and structure
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} Back     alignment and structure
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} Back     alignment and structure
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Back     alignment and structure
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* Back     alignment and structure
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 Back     alignment and structure
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A Back     alignment and structure
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* Back     alignment and structure
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A Back     alignment and structure
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Back     alignment and structure
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A Back     alignment and structure
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} Back     alignment and structure
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* Back     alignment and structure
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} Back     alignment and structure
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} Back     alignment and structure
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} Back     alignment and structure
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} Back     alignment and structure
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Back     alignment and structure
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* Back     alignment and structure
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} Back     alignment and structure
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 Back     alignment and structure
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} Back     alignment and structure
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 Back     alignment and structure
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* Back     alignment and structure
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} Back     alignment and structure
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* Back     alignment and structure
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Back     alignment and structure
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A Back     alignment and structure
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 Back     alignment and structure
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Back     alignment and structure
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* Back     alignment and structure
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* Back     alignment and structure
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* Back     alignment and structure
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} Back     alignment and structure
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} Back     alignment and structure
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Back     alignment and structure
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} Back     alignment and structure
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Back     alignment and structure
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} Back     alignment and structure
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A Back     alignment and structure
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} Back     alignment and structure
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* Back     alignment and structure
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* Back     alignment and structure
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} Back     alignment and structure
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* Back     alignment and structure
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* Back     alignment and structure
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} Back     alignment and structure
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} Back     alignment and structure
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 Back     alignment and structure
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} Back     alignment and structure
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Back     alignment and structure
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* Back     alignment and structure
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} Back     alignment and structure
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* Back     alignment and structure
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* Back     alignment and structure
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} Back     alignment and structure
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* Back     alignment and structure
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* Back     alignment and structure
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} Back     alignment and structure
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Back     alignment and structure
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* Back     alignment and structure
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} Back     alignment and structure
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} Back     alignment and structure
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* Back     alignment and structure
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A Back     alignment and structure
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Back     alignment and structure
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} Back     alignment and structure
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A Back     alignment and structure
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* Back     alignment and structure
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 Back     alignment and structure
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* Back     alignment and structure
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* Back     alignment and structure
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} Back     alignment and structure
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 Back     alignment and structure
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* Back     alignment and structure
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 Back     alignment and structure
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} Back     alignment and structure
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Back     alignment and structure
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* Back     alignment and structure
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} Back     alignment and structure
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 Back     alignment and structure
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* Back     alignment and structure
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A Back     alignment and structure
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli} Back     alignment and structure
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} Back     alignment and structure
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} Back     alignment and structure
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 Back     alignment and structure
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} Back     alignment and structure
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} Back     alignment and structure
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} Back     alignment and structure
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* Back     alignment and structure
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} Back     alignment and structure
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} Back     alignment and structure
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} Back     alignment and structure
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* Back     alignment and structure
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} Back     alignment and structure
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} Back     alignment and structure
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* Back     alignment and structure
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 Back     alignment and structure
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 Back     alignment and structure
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* Back     alignment and structure
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A Back     alignment and structure
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A* Back     alignment and structure
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* Back     alignment and structure
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} Back     alignment and structure
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} Back     alignment and structure
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Back     alignment and structure
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Back     alignment and structure
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* Back     alignment and structure
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Back     alignment and structure
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli} Back     alignment and structure
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... Back     alignment and structure
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} Back     alignment and structure
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* Back     alignment and structure
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Back     alignment and structure
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* Back     alignment and structure
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} Back     alignment and structure
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* Back     alignment and structure
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 Back     alignment and structure
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3} Back     alignment and structure
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Back     alignment and structure
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* Back     alignment and structure
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* Back     alignment and structure
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* Back     alignment and structure
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* Back     alignment and structure
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* Back     alignment and structure
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* Back     alignment and structure
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} Back     alignment and structure
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* Back     alignment and structure
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} Back     alignment and structure
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* Back     alignment and structure
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* Back     alignment and structure
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* Back     alignment and structure
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 Back     alignment and structure
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 Back     alignment and structure
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* Back     alignment and structure
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* Back     alignment and structure
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* Back     alignment and structure
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* Back     alignment and structure
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} Back     alignment and structure
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} Back     alignment and structure
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} Back     alignment and structure
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} Back     alignment and structure
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 Back     alignment and structure
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} Back     alignment and structure
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* Back     alignment and structure
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* Back     alignment and structure
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* Back     alignment and structure
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A* Back     alignment and structure
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis} Back     alignment and structure
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* Back     alignment and structure
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae} Back     alignment and structure
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A Back     alignment and structure
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 Back     alignment and structure
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus} Back     alignment and structure
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A Back     alignment and structure
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 Back     alignment and structure
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} Back     alignment and structure
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A* Back     alignment and structure
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* Back     alignment and structure
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A Back     alignment and structure
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} Back     alignment and structure
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* Back     alignment and structure
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A* Back     alignment and structure
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59 Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} Back     alignment and structure
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* Back     alignment and structure
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} Back     alignment and structure
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A Back     alignment and structure
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* Back     alignment and structure
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} Back     alignment and structure
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A Back     alignment and structure
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* Back     alignment and structure
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus} Back     alignment and structure
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23 Back     alignment and structure
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A* Back     alignment and structure
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Back     alignment and structure
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A* Back     alignment and structure
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Back     alignment and structure
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus} Back     alignment and structure
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus} Back     alignment and structure
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A* Back     alignment and structure
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Back     alignment and structure
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Back     alignment and structure
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A* Back     alignment and structure
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24 Back     alignment and structure
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Back     alignment and structure
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli} Back     alignment and structure
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26 Back     alignment and structure
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ... Back     alignment and structure
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} Back     alignment and structure
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A Back     alignment and structure
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157} Back     alignment and structure
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 Back     alignment and structure
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Back     alignment and structure
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Back     alignment and structure
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Back     alignment and structure
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Back     alignment and structure
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Back     alignment and structure
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A* Back     alignment and structure
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda} Back     alignment and structure
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A Back     alignment and structure
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A Back     alignment and structure
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 Back     alignment and structure
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica} Back     alignment and structure
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Back     alignment and structure
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} Back     alignment and structure
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Back     alignment and structure
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Back     alignment and structure
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* Back     alignment and structure
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Back     alignment and structure
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* Back     alignment and structure
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Back     alignment and structure
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Back     alignment and structure
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Back     alignment and structure
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 Back     alignment and structure
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Back     alignment and structure
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Back     alignment and structure
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Back     alignment and structure
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Back     alignment and structure
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A Back     alignment and structure
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Back     alignment and structure
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Back     alignment and structure
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Back     alignment and structure
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Back     alignment and structure
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Back     alignment and structure
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Back     alignment and structure
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Back     alignment and structure
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Back     alignment and structure
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Back     alignment and structure
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A* Back     alignment and structure
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Back     alignment and structure
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Back     alignment and structure
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Back     alignment and structure
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Back     alignment and structure
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Back     alignment and structure
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Back     alignment and structure
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Back     alignment and structure
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Back     alignment and structure
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Back     alignment and structure
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Back     alignment and structure
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Back     alignment and structure
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Back     alignment and structure
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Back     alignment and structure
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens} Back     alignment and structure
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Back     alignment and structure
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Back     alignment and structure
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 Back     alignment and structure
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A* Back     alignment and structure
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A* Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56 Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Back     alignment and structure
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Back     alignment and structure
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Back     alignment and structure
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} Back     alignment and structure
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans} Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Back     alignment and structure
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Back     alignment and structure
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Back     alignment and structure
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus} Back     alignment and structure
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Back     alignment and structure
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 Back     alignment and structure
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A* Back     alignment and structure
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} Back     alignment and structure
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Back     alignment and structure
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A Back     alignment and structure
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Back     alignment and structure
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Back     alignment and structure
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 Back     alignment and structure
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A Back     alignment and structure
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Back     alignment and structure
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Back     alignment and structure
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Back     alignment and structure
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Back     alignment and structure
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Back     alignment and structure
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Back     alignment and structure
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Back     alignment and structure
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 Back     alignment and structure
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* Back     alignment and structure
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52 Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Back     alignment and structure
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0 Back     alignment and structure
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* Back     alignment and structure
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Back     alignment and structure
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0 Back     alignment and structure
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Back     alignment and structure
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Back     alignment and structure
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Back     alignment and structure
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Back     alignment and structure
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Back     alignment and structure
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Back     alignment and structure
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Back     alignment and structure
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Back     alignment and structure
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Back     alignment and structure
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Back     alignment and structure
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus} Back     alignment and structure
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Back     alignment and structure
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Back     alignment and structure
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Back     alignment and structure
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Back     alignment and structure
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* Back     alignment and structure
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima} Back     alignment and structure
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum} Back     alignment and structure
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Back     alignment and structure
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP} Back     alignment and structure
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* Back     alignment and structure
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii} Back     alignment and structure
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Back     alignment and structure
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} Back     alignment and structure
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Back     alignment and structure
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} Back     alignment and structure
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5 Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 319
d1xj5a_290 c.66.1.17 (A:) Spermidine synthase {Thale cress (A 8e-92
d2b2ca1312 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhab 8e-91
d2o07a1285 c.66.1.17 (A:16-300) Spermidine synthase {Human (H 1e-81
d1inla_295 c.66.1.17 (A:) Spermidine synthase {Thermotoga mar 2e-73
d1iy9a_274 c.66.1.17 (A:) Spermidine synthase {Bacillus subti 2e-71
d1uira_312 c.66.1.17 (A:) Spermidine synthase {Thermus thermo 2e-70
d1mjfa_276 c.66.1.17 (A:) Putative spermidine synthetase PF01 6e-67
d2b25a1324 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 2e-05
d1xvaa_292 c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Ra 2e-04
d1zx0a1229 c.66.1.16 (A:8-236) Guanidinoacetate methyltransfe 0.003
d1booa_ 320 c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA me 0.004
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 290 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  273 bits (698), Expect = 8e-92
 Identities = 202/231 (87%), Positives = 224/231 (96%)

Query: 47  SSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTE 106
           S+VIPGWFSE+SPMWPGEAHSLKVEK+LFQGKSDYQ+V+VFQS+TYGKVL+LDGVIQLTE
Sbjct: 1   STVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTE 60

Query: 107 RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVS 166
           RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREV+RH+S+E+ID+CEIDKMVVDVS
Sbjct: 61  RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVS 120

Query: 167 KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFES 226
           KQFFPDVA+G+EDPRV L IGDGVAFLK   EG+YDAVIVDSSDPIGPA+ELFEKPFF+S
Sbjct: 121 KQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQS 180

Query: 227 VAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 277
           VA+ALRPGGVV TQAES+WLHM IIEDIV+NCR+IFKGSVNYAWT+VPTYP
Sbjct: 181 VARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYP 231
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} Length = 312 Back     information, alignment and structure
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} Length = 295 Back     information, alignment and structure
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} Length = 274 Back     information, alignment and structure
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} Length = 312 Back     information, alignment and structure
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 276 Back     information, alignment and structure
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 292 Back     information, alignment and structure
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 229 Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Length = 320 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
d2b2ca1312 Spermidine synthase {Caenorhabditis elegans [TaxId 100.0
d1xj5a_290 Spermidine synthase {Thale cress (Arabidopsis thal 100.0
d2o07a1285 Spermidine synthase {Human (Homo sapiens) [TaxId: 100.0
d1inla_295 Spermidine synthase {Thermotoga maritima [TaxId: 2 100.0
d1iy9a_274 Spermidine synthase {Bacillus subtilis [TaxId: 142 100.0
d1uira_312 Spermidine synthase {Thermus thermophilus [TaxId: 100.0
d1mjfa_276 Putative spermidine synthetase PF0127 (SpeE) {Arch 100.0
d1zx0a1229 Guanidinoacetate methyltransferase {Human (Homo sa 99.62
d1dusa_194 Hypothetical protein MJ0882 {Archaeon Methanococcu 99.62
d2fcaa1204 tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil 99.61
d1yzha1204 tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep 99.56
d1vl5a_231 Hypothetical protein BH2331 {Bacillus halodurans [ 99.55
d1y8ca_246 Putative methyltransferase CAC2371 {Clostridium ac 99.55
d1l3ia_186 Precorrin-6Y methyltransferase (CbiT) {Archaeon Me 99.55
d1xxla_234 Hypothetical protein YcgJ {Bacillus subtilis [TaxI 99.55
d1wzna1251 Hypothetical methyltransferase PH1305 {Archaeon Py 99.54
d1nkva_245 Hypothetical Protein YjhP {Escherichia coli [TaxId 99.54
d1ve3a1226 Hypothetical protein PH0226 {Archaeon Pyrococcus h 99.52
d2b78a2317 Hypothetical protein SMu776, middle and C-terminal 99.52
d1im8a_225 Hypothetical protein HI0319 (YecO) {Haemophilus in 99.51
d2b3ta1274 N5-glutamine methyltransferase, HemK {Escherichia 99.51
d1yb2a1250 Hypothetical protein Ta0852 {Thermoplasma acidophi 99.5
d2as0a2324 Hypothetical protein PH1915, middle and C-terminal 99.5
d1i9ga_264 Probable methyltransferase Rv2118c {Mycobacterium 99.49
d2o57a1282 Putative sarcosine dimethylglycine methyltransfera 99.48
d1xtpa_254 Hypothetical protein Lmaj004091aaa (LmjF30.0810) { 99.48
d2i6ga1198 Putative methyltransferase TehB {Salmonella typhim 99.48
d2ex4a1222 Adrenal gland protein AD-003 (C9orf32) {Human (Hom 99.47
d1ri5a_252 mRNA cap (Guanine N-7) methyltransferase {Fungus ( 99.46
d2esra1152 Putative methyltransferase SPy1538 {Streptococcus 99.46
d2igta1309 Putative methyltransferase Atu0340 {Agrobacterium 99.46
d1wxxa2318 Hypothetical protein TTHA1280, middle and C-termin 99.45
d2fk8a1280 Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri 99.45
d2nxca1254 PrmA-like protein TTHA0656 (TT0836) {Thermus therm 99.44
d1nt2a_209 Fibrillarin homologue {Archaeon Archaeoglobus fulg 99.44
d2b25a1324 Hypothetical protein FLJ20628 {Human (Homo sapiens 99.43
d1kpia_291 CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} 99.43
d2p7ia1225 Hypothetical protein ECA1738 {Erwinia carotovora [ 99.42
d2avna1246 Hypothetical methyltransferase TM1389 {Thermotoga 99.42
d2avda1219 COMT domain-containing protein 1, COMTD1 {Human (H 99.42
d1pjza_201 Thiopurine S-methyltransferase {Pseudomonas syring 99.41
d1p91a_268 rRNA methyltransferase RlmA {Escherichia coli [Tax 99.4
d2gh1a1281 Methyltransferase BC2162 {Bacillus cereus [TaxId: 99.4
d1o54a_266 Hypothetical protein TM0748 {Thermotoga maritima [ 99.39
d1dl5a1213 Protein-L-isoaspartyl O-methyltransferase {Thermot 99.37
d1kpga_285 CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} 99.36
d1susa1227 Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag 99.36
d1tw3a2253 Carminomycin 4-O-methyltransferase {Streptomyces p 99.35
d1g8sa_230 Fibrillarin homologue {Archaeon Methanococcus jann 99.35
d2fpoa1183 Methylase YhhF {Escherichia coli [TaxId: 562]} 99.34
d2bzga1229 Thiopurine S-methyltransferase {Human (Homo sapien 99.34
d1vbfa_224 Protein-L-isoaspartyl O-methyltransferase {Sulfolo 99.33
d1i1na_224 Protein-L-isoaspartyl O-methyltransferase {Human ( 99.32
d1g8aa_227 Fibrillarin homologue {Archaeon Pyrococcus horikos 99.31
d2fhpa1182 Putative methylase EF2452 {Enterococcus faecalis [ 99.31
d1xvaa_292 Glycine N-methyltransferase {Rat (Rattus norvegicu 99.29
d2frna1260 Hypothetical protein PH0793 {Pyrococcus horikoshii 99.28
d2cl5a1214 Catechol O-methyltransferase, COMT {Rat (Rattus no 99.25
d1qzza2256 Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu 99.24
d1ws6a1171 Methyltransferase TTHA0928 {Thermus thermophilus [ 99.23
d1nv8a_271 N5-glutamine methyltransferase, HemK {Thermotoga m 99.23
d1vlma_208 Possible histamine N-methyltransferase TM1293 {The 99.22
d1jg1a_215 Protein-L-isoaspartyl O-methyltransferase {Archaeo 99.21
d2fyta1311 Protein arginine N-methyltransferase 3, PRMT3 {Hum 99.18
d1jqea_280 Histamine methyltransferase {Human (Homo sapiens) 99.18
d2ifta1183 Putative methylase HI0767 {Haemophilus influenzae 99.15
d1ne2a_197 Hypothetical protein Ta1320 {Archaeon Thermoplasma 99.15
d1r18a_223 Protein-L-isoaspartyl O-methyltransferase {Fruit f 99.14
d1g6q1_ 328 Arginine methyltransferase, HMT1 {Baker's yeast (S 99.14
d1wy7a1201 Hypothetical protein PH1948 {Archaeon Pyrococcus h 99.12
d1nw3a_328 Catalytic, N-terminal domain of histone methyltran 99.11
d1oria_316 Protein arginine N-methyltransferase 1, PRMT1 {Rat 99.11
d2h00a1250 Methyltransferase 10 domain containing protein MET 99.05
d1m6ya2192 TM0872, methyltransferase domain {Thermotoga marit 99.03
d2a14a1257 Indolethylamine N-methyltransferase, INMT {Human ( 99.0
d1u2za_406 Catalytic, N-terminal domain of histone methyltran 98.91
d2g72a1263 Phenylethanolamine N-methyltransferase, PNMTase {H 98.82
d2dula1 375 N(2),N(2)-dimethylguanosine tRNA methyltransferase 98.73
d2f8la1328 Hypothetical protein Lmo1582 {Listeria monocytogen 98.71
d1qama_235 rRNA adenine dimethylase {Bacillus subtilis, Ermc' 98.7
d1fp1d2244 Chalcone O-methyltransferase {Alfalfa (Medicago sa 98.59
d2ih2a1223 DNA methylase TaqI, N-terminal domain {Thermus aqu 98.58
d1uwva2358 rRNA (Uracil-5-)-methyltransferase RumA, catalytic 98.52
d2bm8a1232 Cephalosporin hydroxylase CmcI {Streptomyces clavu 98.52
d1yuba_245 rRNA adenine dimethylase {Streptococcus pneumoniae 98.52
d1fp2a2244 Isoflavone O-methyltransferase {Alfalfa (Medicago 98.46
d1sqga2284 Ribosomal RNA small subunit methyltransferase B, R 98.38
d1kyza2243 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra 98.37
d1jsxa_207 Glucose-inhibited division protein B (GidB) {Esche 98.36
d1xdza_239 Glucose-inhibited division protein B (GidB) {Bacil 98.35
d1ej0a_180 RNA methyltransferase FtsJ {Escherichia coli [TaxI 98.34
d1af7a2193 Chemotaxis receptor methyltransferase CheR, C-term 98.24
d2okca1425 Type I restriction enzyme StySJI M protein {Bacter 98.22
d1ixka_313 Hypothetical methyltransferase PH1374 {Archaeon Py 98.22
d1qyra_252 High level kasugamycin resistance protein KsgA {Es 98.16
d1zq9a1278 Probable dimethyladenosine transferase {Human (Hom 98.1
d1wg8a2182 TM0872, methyltransferase domain {Thermus thermoph 98.1
d2b9ea1293 NOL1R {Human (Homo sapiens) [TaxId: 9606]} 98.05
d2oyra1250 Hypothetical protein YhiQ {Shigella flexneri [TaxI 98.04
d2p41a1257 An RNA cap (nucleoside-2'-O-)-methyltransferase do 97.99
d2ar0a1 524 M.EcoKI {Escherichia coli [TaxId: 562]} 97.75
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 97.54
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 97.54
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 97.49
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 97.49
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 97.47
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 97.45
d1i4wa_322 Transcription factor sc-mtTFB {Baker's yeast (Sacc 97.43
d1h2ba2172 Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ 97.33
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 97.24
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 97.16
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 97.16
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 97.1
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 97.03
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 96.93
d1jvba2170 Alcohol dehydrogenase {Archaeon Sulfolobus solfata 96.83
d1yb5a2174 Quinone oxidoreductase {Human (Homo sapiens) [TaxI 96.72
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 96.71
d1dcta_ 324 DNA methylase HaeIII {Haemophilus aegyptius [TaxId 96.5
d1pqwa_183 Putative enoyl reductase domain of polyketide synt 96.47
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 96.47
d1g60a_ 256 Methyltransferase mboII {Moraxella bovis [TaxId: 4 96.4
d1vj1a2187 Putative zinc-binding alcohol dehydrogenase {Mouse 96.39
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 96.33
d1booa_ 320 m.PvuII N4 cytosine-specific DNA methyltransferase 96.24
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 96.2
d1eg2a_ 279 m.RsrI N6 adenosine-specific DNA methyltransferase 96.2
d2fzwa2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 96.1
d1xa0a2176 B. subtilis YhfP homologue {Bacillus stearothermop 95.99
d2oo3a1271 Uncharacterized protein LPG1296 {Legionella pneumo 95.93
d2jhfa2176 Alcohol dehydrogenase {Horse (Equus caballus) [Tax 95.88
d1g55a_ 343 DNMT2 {Human (Homo sapiens) [TaxId: 9606]} 95.79
d2c7pa1 327 DNA methylase HhaI {Haemophilus haemolyticus [TaxI 95.62
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 95.41
d1qora2179 Quinone oxidoreductase {Escherichia coli [TaxId: 5 95.25
d1cdoa2175 Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI 94.96
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 94.9
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 94.86
d1iz0a2171 Quinone oxidoreductase {Thermus thermophilus [TaxI 94.76
d1v3va2182 Leukotriene b4 12-hydroxydehydrogenase/prostagland 94.69
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 94.62
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 94.35
d1booa_320 m.PvuII N4 cytosine-specific DNA methyltransferase 93.98
d1g60a_256 Methyltransferase mboII {Moraxella bovis [TaxId: 4 93.41
d1tt7a2167 Hypothetical protein YhfP {Bacillus subtilis [TaxI 93.08
d1o89a2177 Hypothetical protein YhdH {Escherichia coli [TaxId 92.85
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 92.8
d1ydwa1184 Probable oxidoreductase At4g09670 {Thale cress (Ar 92.61
d1eg2a_279 m.RsrI N6 adenosine-specific DNA methyltransferase 92.53
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 92.4
d1ae1a_258 Tropinone reductase {Jimsonweed (Datura stramonium 92.18
d1pr9a_244 Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 92.09
d1yb1a_244 17-beta-hydroxysteroid dehydrogenase type XI {Huma 92.0
d1o9ga_249 rRNA methyltransferase AviRa {Streptomyces viridoc 91.6
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 91.39
d1id1a_153 Rck domain from putative potassium channel Kch {Es 91.39
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 91.27
d2ae2a_259 Tropinone reductase {Jimsonweed (Datura stramonium 90.92
d1xg5a_257 Putative dehydrogenase ARPG836 (MGC4172) {Human (H 90.76
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 90.48
d1dz3a_123 Sporulation response regulator Spo0A {Bacillus ste 90.46
d1yxma1297 Peroxisomal trans 2-enoyl CoA reductase {Human (Ho 90.32
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 90.1
d1yioa2128 Response regulatory protein StyR, N-terminal domai 89.72
d1zk4a1251 R-specific alcohol dehydrogenase {Lactobacillus br 89.71
d1xhla_274 Hypothetical protein F25D1.5 {Caenorhabditis elega 89.69
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 89.63
d1peya_119 Sporulation response regulator Spo0F {Bacillus sub 89.53
d1p2fa2120 Response regulator DrrB {Thermotoga maritima [TaxI 89.27
d1gu7a2189 2,4-dienoyl-CoA reductase {Yeast (Candida tropical 89.26
d1cyda_242 Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 89.22
d1hdca_254 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre 89.14
d1u0sy_118 CheY protein {Thermotoga maritima [TaxId: 2336]} 89.07
d1zema1260 Xylitol dehydrogenase {Gluconobacter oxydans [TaxI 89.07
d1kgsa2122 PhoB receiver domain {Thermotoga maritima [TaxId: 89.06
d1qkka_140 Transcriptional regulatory protein DctD, receiver 89.04
d1dbwa_123 Transcriptional regulatory protein FixJ, receiver 88.57
d1zesa1121 PhoB receiver domain {Escherichia coli [TaxId: 562 88.5
d1a04a2138 Nitrate/nitrite response regulator (NarL), receive 88.45
d2bgka1268 Rhizome secoisolariciresinol dehydrogenase {Mayapp 88.33
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 88.29
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 88.13
d2c07a1251 beta-keto acyl carrier protein reductase {Malaria 88.11
d1mvoa_121 PhoP receiver domain {Bacillus subtilis [TaxId: 14 88.03
d1vl8a_251 Gluconate 5-dehydrogenase {Thermotoga maritima [Ta 87.93
d2pl1a1119 PhoP receiver domain {Escherichia coli [TaxId: 562 87.9
d1nffa_244 Putative oxidoreductase Rv2002 {Mycobacterium tube 87.89
d2rhca1257 beta-keto acyl carrier protein reductase {Streptom 87.85
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 87.83
d1zkda1365 Hypothetical protein RPA4359 {Rhodopseudomonas pal 87.78
d1xq1a_259 Tropinone reductase {Thale cress (Arabidopsis thal 87.74
d2iida1 370 L-aminoacid oxidase {Malayan pit viper (Calloselas 87.64
d1k2wa_256 Sorbitol dehydrogenase {Rhodobacter sphaeroides [T 87.19
d1dcfa_134 Receiver domain of the ethylene receptor {Thale cr 87.16
d1gega_255 meso-2,3-butanediol dehydrogenase {Klebsiella pneu 87.1
d1ys7a2121 Transcriptional regulatory protein PrrA, N-termina 86.96
d1ydea1250 Retinal dehydrogenase/reductase 3 {Human (Homo sap 86.94
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 86.71
d2b4aa1118 Hypothetical protein BH3024 {Bacillus halodurans [ 86.63
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 86.55
d1xeaa1167 Putative oxidoreductase VCA1048 {Vibrio cholerae [ 86.53
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 86.49
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 86.0
d1krwa_123 NTRC receiver domain {Salmonella typhimurium [TaxI 85.79
d1q7ba_243 beta-keto acyl carrier protein reductase {Escheric 85.42
d1hxha_253 3beta/17beta hydroxysteroid dehydrogenase {Comamon 85.32
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 85.21
d1ny5a1137 Transcriptional activator sigm54 (NtrC1), N-termin 85.11
d2gdza1254 15-hydroxyprostaglandin dehydrogenase, PGDH {Human 84.95
d1zh8a1181 Hypothetical protein TM0312 {Thermotoga maritima [ 84.95
d2a4ka1241 beta-keto acyl carrier protein reductase {Thermus 84.82
d1fmca_255 7-alpha-hydroxysteroid dehydrogenase {Escherichia 84.56
d1a2oa1140 Methylesterase CheB, N-terminal domain {Salmonella 84.49
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 84.47
d1xu9a_269 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom 84.23
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 84.12
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 84.11
d1wmaa1275 Carbonyl reductase/20beta-hydroxysteroid dehydroge 83.82
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 83.73
d1h6da1221 Glucose-fructose oxidoreductase, N-terminal domain 83.62
d1ulsa_242 beta-keto acyl carrier protein reductase {Thermus 83.55
d1g0oa_272 1,3,8-trihydroxynaphtalene reductase (THNR, naphto 83.15
d1xhfa1121 Aerobic respiration control protein ArcA, N-termin 82.83
d2a9pa1117 DNA-binding response regulator MicA, N-terminal do 82.7
d1ja9a_259 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl 82.69
d1iy8a_258 Levodione reductase {Corynebacterium aquaticum [Ta 82.57
d1o5ia_234 beta-keto acyl carrier protein reductase {Thermoto 82.27
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 82.27
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 82.26
d1xkqa_272 Hypothetical protein R05D8.7 {Caenorhabditis elega 82.15
d2pgda2176 6-phosphogluconate dehydrogenase {Sheep (Ovis orie 81.98
d1x1ta1260 D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas 81.98
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 81.94
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 81.78
d1obba1171 Alpha-glucosidase AglA {Thermotoga maritima [TaxId 81.71
d2d1ya1248 Hypothetical protein TTHA0369 {Thermus thermophilu 81.36
d2r25b1128 Response regulator Sin1 {Baker's yeast (Saccharomy 81.34
d1mb3a_123 Cell division response regulator DivK {Caulobacter 81.19
d2nvwa1237 Galactose/lactose metabolism regulatory protein GA 81.07
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 81.06
d1jbea_128 CheY protein {Escherichia coli [TaxId: 562]} 80.72
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 80.54
d1p6qa_129 CheY protein {Sinorhizobium meliloti, CheY2 [TaxId 80.5
d1zh2a1119 Transcriptional regulatory protein KdpE, N-termina 80.48
d1zgza1120 TorCAD operon transcriptional regulator TorD, N-te 80.43
d2ag5a1245 Dehydrogenase/reductase SDR family member 6, DHRS6 80.21
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.7e-54  Score=400.01  Aligned_cols=228  Identities=52%  Similarity=0.984  Sum_probs=204.9

Q ss_pred             CCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCceeeEeecccc
Q 020933           59 PMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDG  138 (319)
Q Consensus        59 ~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G  138 (319)
                      .+|||++++++++++|++++|+||+|.|++++.||++|+|||.+|+++.|++.|||||+|+|++.|++|++||+||+|+|
T Consensus        39 ~~wpg~~~~~~v~~vl~~~~S~yQ~I~i~~~~~~G~~L~LDg~~q~~e~de~~YhE~l~h~pl~~~~~pk~VLIiGgG~G  118 (312)
T d2b2ca1          39 GAWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDG  118 (312)
T ss_dssp             CCCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTS
T ss_pred             cCCCCceEEEEEEEEEEecCCCCeEEEEEEcCCcCCEEEECCceeeecccHHHHHHHhhhHHHhcCCCCCeEEEeCCCch
Confidence            37999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCcccc
Q 020933          139 GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQEL  218 (319)
Q Consensus       139 ~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l  218 (319)
                      +++++++++.+..+|++||||++|+++|+++|+..+..++++|++++++|+++|++.. +++||+||+|++++.+++..|
T Consensus       119 ~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~-~~~yDvII~D~~dp~~~~~~L  197 (312)
T d2b2ca1         119 GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH-KNEFDVIITDSSDPVGPAESL  197 (312)
T ss_dssp             HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC-TTCEEEEEECCC---------
T ss_pred             HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhC-CCCCCEEEEcCCCCCCcchhh
Confidence            9999999998889999999999999999999988766688999999999999999886 789999999999999989999


Q ss_pred             chHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEEEcCC
Q 020933          219 FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSCSAVN  288 (319)
Q Consensus       219 ~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~S~~~  288 (319)
                      ++.+||+.++++|+|||++++|+++++.+.+.+..+.++++++| ..+.++...+|+||+|.|  ++||++.
T Consensus       198 ~t~eFy~~~~~~L~~~Gi~v~q~~s~~~~~~~~~~i~~~l~~vF-~~v~~y~~~vPtyp~G~w~f~~aSk~~  268 (312)
T d2b2ca1         198 FGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIF-PAVTYAQSIVSTYPSGSMGYLICAKNA  268 (312)
T ss_dssp             ----HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHC-SEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred             hhHHHHHHHHhhcCCCcEEEEecCChHHhHHHHHHHHHHhhhcc-ceEEEeeeccCCcCCccceeeEEECCC
Confidence            99999999999999999999999999999999999999999999 578888899999999887  8899873
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} Back     information, alignment and structure
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} Back     information, alignment and structure
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} Back     information, alignment and structure
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} Back     information, alignment and structure
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} Back     information, alignment and structure
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} Back     information, alignment and structure
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]} Back     information, alignment and structure
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]} Back     information, alignment and structure
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dcta_ c.66.1.26 (A:) DNA methylase HaeIII {Haemophilus aegyptius [TaxId: 197575]} Back     information, alignment and structure
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} Back     information, alignment and structure
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1g55a_ c.66.1.26 (A:) DNMT2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]} Back     information, alignment and structure
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} Back     information, alignment and structure
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Back     information, alignment and structure
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o9ga_ c.66.1.29 (A:) rRNA methyltransferase AviRa {Streptomyces viridochromogenes [TaxId: 1938]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Back     information, alignment and structure
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Back     information, alignment and structure
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Back     information, alignment and structure
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} Back     information, alignment and structure
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]} Back     information, alignment and structure
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} Back     information, alignment and structure
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Back     information, alignment and structure
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a2oa1 c.23.1.1 (A:1-140) Methylesterase CheB, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Back     information, alignment and structure
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]} Back     information, alignment and structure
>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]} Back     information, alignment and structure
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure