Citrus Sinensis ID: 020944

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MSESETQEQQQKPKREGDFDDFNLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
ccccHHHHHHcccccccccccccccccccHHHHHcHHHHHHHHHHHccccccccEEEEEEEEEcccccccccEEEEEccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccEEEEEEccccEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEccccccHHHHHHHccccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccEEEEEEEccc
ccccccccccccccccccccccccccccccHHHHccccEEEccEEEEcccccccEEEEEEcccccccccHHcHHEEEccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEEccccccccccEEEEcccccccccHHHHHHHHHcccEEEEccEEccEEEEHHHcccHHHccccEcccccEEEEEEccccEEEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEEEccc
msesetqeqqqkpkregdfddfnlIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADaaedkgsrhtmeDASVVLVdassdsppnlrcaHFAIFDGHGGRLAAEYAQKRLHANVIsaglprfrktdeSLLQesvsggwqdgaTAVCIWILGRTVFVANIGDAKAVVARSsivdgsnnhldelSSLKAIVVTRVHKAIYPQERARIQksggtvssngrlqgrlevsrafgdrqfkkfgvvatpdihsfevterdhFIILgcdglwgvfgpsDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
msesetqeqqqkpkregdfddfnLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSivdgsnnhldelsslkaivVTRVHKAIypqerariqksggtvssngrlqGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLkeglsvtavsrrlvreavlerrckdnctaIVIIFRHK
MSESETQEQQQKPKREGDFDDFNLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEdasvvlvdassdsPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTavsrrlvreavlerrCKDNCTAIVIIFRHK
**************************************************IDFV*********************************LRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ*********************LEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFR**
*****************************************************VEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVS*GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
****************GDFDDFNLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
************************************NEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
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MSESETQEQQQKPKREGDFDDFNLIAKKSKIEKVNENEEEAARxxxxxxxxxxxxxxxxxxxxxGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q9LMT1351 Probable protein phosphat yes no 0.884 0.803 0.704 1e-118
Q0J2R1367 Probable protein phosphat yes no 0.833 0.724 0.708 1e-115
Q9H0C8392 Integrin-linked kinase-as yes no 0.884 0.719 0.339 5e-43
Q0IIF0370 Integrin-linked kinase-as yes no 0.871 0.751 0.337 6e-43
Q9Z1Z6392 Integrin-linked kinase-as yes no 0.884 0.719 0.336 2e-42
Q8R0F6392 Integrin-linked kinase-as yes no 0.884 0.719 0.336 2e-42
Q9SLA1392 Probable protein phosphat no no 0.752 0.612 0.359 2e-33
Q6L5C4491 Probable protein phosphat no no 0.721 0.468 0.352 2e-30
Q69VD9367 Probable protein phosphat no no 0.827 0.719 0.309 6e-30
Q0JL75377 Probable protein phosphat no no 0.721 0.610 0.352 7e-30
>sp|Q9LMT1|P2C08_ARATH Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2 Back     alignment and function desciption
 Score =  424 bits (1089), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/298 (70%), Positives = 241/298 (80%), Gaps = 16/298 (5%)

Query: 35  NENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFA 94
           N   EE   + +  ++ +F+ +EAD AEDKG+RHTMED  VVL DAS D P  LRCAHFA
Sbjct: 53  NREAEEDKPSFVSEEKKEFL-VEADVAEDKGARHTMEDVWVVLPDASLDFPGTLRCAHFA 111

Query: 95  IFDGHGGRLAAEYAQKRLHANVISAGLPR---------------FRKTDESLLQESVSGG 139
           I+DGHGGRLAAE+A+K LH NV+SAGLPR               FRKTDE LLQ+SVSGG
Sbjct: 112 IYDGHGGRLAAEFAKKHLHLNVLSAGLPRELLDVKVAKKAILEGFRKTDELLLQKSVSGG 171

Query: 140 WQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199
           WQDGATAVC+WIL + VFVANIGDAKAV+ARSS  +   NH +  + LKAIV+TR HKAI
Sbjct: 172 WQDGATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAI 231

Query: 200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFII 259
           YPQER+RIQKSGG +SSNGRLQGRLEVSRAFGDR FKKFGV ATPDIH+FE+TER++F+I
Sbjct: 232 YPQERSRIQKSGGVISSNGRLQGRLEVSRAFGDRHFKKFGVSATPDIHAFELTERENFMI 291

Query: 260 LGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFR 317
           LGCDGLW VFGPSDAV FVQKLLKEGL V+ VSRRLV+EAV ERRCKDNCTAIVI+F+
Sbjct: 292 LGCDGLWEVFGPSDAVGFVQKLLKEGLHVSTVSRRLVKEAVKERRCKDNCTAIVIVFK 349

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q0J2R1|P2C67_ORYSJ Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1 Back     alignment and function description
>sp|Q9H0C8|ILKAP_HUMAN Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1 Back     alignment and function description
>sp|Q0IIF0|ILKAP_BOVIN Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1 Back     alignment and function description
>sp|Q9Z1Z6|ILKAP_RAT Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1 Back     alignment and function description
>sp|Q8R0F6|ILKAP_MOUSE Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1 Back     alignment and function description
>sp|Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1 Back     alignment and function description
>sp|Q6L5C4|P2C52_ORYSJ Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1 Back     alignment and function description
>sp|Q69VD9|P2C57_ORYSJ Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1 Back     alignment and function description
>sp|Q0JL75|P2C07_ORYSJ Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
449497544348 PREDICTED: probable protein phosphatase 0.978 0.896 0.671 1e-126
449439101348 PREDICTED: probable protein phosphatase 0.978 0.896 0.668 1e-126
225456039378 PREDICTED: probable protein phosphatase 0.830 0.701 0.785 1e-125
357500131321 hypothetical protein MTR_6g081850 [Medic 0.924 0.919 0.686 1e-121
224133162266 predicted protein [Populus trichocarpa] 0.780 0.936 0.803 1e-121
255558671349 protein phosphatase 2c, putative [Ricinu 0.915 0.836 0.671 1e-119
297844754341 hypothetical protein ARALYDRAFT_312763 [ 0.965 0.903 0.654 1e-116
18394565351 putative protein phosphatase 2C 8 [Arabi 0.884 0.803 0.704 1e-116
9719738341 Contains similarity to protein phosphata 0.884 0.826 0.704 1e-116
16226856351 At1g18030/T10F20_3 [Arabidopsis thaliana 0.884 0.803 0.704 1e-116
>gi|449497544|ref|XP_004160432.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/344 (67%), Positives = 270/344 (78%), Gaps = 32/344 (9%)

Query: 3   ESETQEQQQKPKREGDFDDFNLIAKKSK------------IEKVNENEEEAARAQIMHKQ 50
           E ET + + K KR  D +D ++  KK K            +E VN +EE     +++ + 
Sbjct: 10  EEETSKLEPKSKRGADVEDADVTVKKFKTQAAADETGARNLEAVNGDEE----LKVIKRD 65

Query: 51  IDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQK 110
           ++FV IEADAAEDKGSRHTMEDA V+L+DAS D P  LRCAHFAI+DGHGGRLAAE+AQK
Sbjct: 66  VEFV-IEADAAEDKGSRHTMEDAWVLLLDASLDFPGKLRCAHFAIYDGHGGRLAAEHAQK 124

Query: 111 RLHANVISAGLPR---------------FRKTDESLLQESVSGGWQDGATAVCIWILGRT 155
            L  NV+S+GLPR               FRKTDESLLQES +GGWQDGATAVC+W+LG+T
Sbjct: 125 HLQKNVLSSGLPRELLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQT 184

Query: 156 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS 215
           VFVAN+GDAKAVVARS   D S  + +  SSLKAIV+TR HKAIYPQERARIQK+GG V 
Sbjct: 185 VFVANVGDAKAVVARSLTTDKSTTNSNGGSSLKAIVLTREHKAIYPQERARIQKAGGVVG 244

Query: 216 SNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAV 275
           SNGRLQGRLEVSRAFGDRQFKK GV+ATPDIHSFE+T+R+HFIILGCDGLWGVFGPSDAV
Sbjct: 245 SNGRLQGRLEVSRAFGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPSDAV 304

Query: 276 EFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK 319
           +FVQKLLK+GLSV ++SRRLVREA+ ERRCKDNCTAIV++FR K
Sbjct: 305 DFVQKLLKDGLSVASISRRLVREAIRERRCKDNCTAIVVVFRPK 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449439101|ref|XP_004137326.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225456039|ref|XP_002277457.1| PREDICTED: probable protein phosphatase 2C 8 [Vitis vinifera] gi|297734261|emb|CBI15508.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357500131|ref|XP_003620354.1| hypothetical protein MTR_6g081850 [Medicago truncatula] gi|355495369|gb|AES76572.1| hypothetical protein MTR_6g081850 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224133162|ref|XP_002321498.1| predicted protein [Populus trichocarpa] gi|222868494|gb|EEF05625.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255558671|ref|XP_002520360.1| protein phosphatase 2c, putative [Ricinus communis] gi|223540458|gb|EEF42026.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297844754|ref|XP_002890258.1| hypothetical protein ARALYDRAFT_312763 [Arabidopsis lyrata subsp. lyrata] gi|297336100|gb|EFH66517.1| hypothetical protein ARALYDRAFT_312763 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18394565|ref|NP_564045.1| putative protein phosphatase 2C 8 [Arabidopsis thaliana] gi|226739232|sp|Q9LMT1.2|P2C08_ARATH RecName: Full=Probable protein phosphatase 2C 8; Short=AtPP2C08 gi|109946401|gb|ABG48379.1| At1g18030 [Arabidopsis thaliana] gi|332191544|gb|AEE29665.1| putative protein phosphatase 2C 8 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9719738|gb|AAF97840.1|AC034107_23 Contains similarity to protein phosphatase 2C from Rattus norvegicus gb|AF095927 and contains a protein phosphatase 2C PF|00481 domain. ESTs gb|N95912, gb|AI993625 come from this gene [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|16226856|gb|AAL16282.1|AF428352_1 At1g18030/T10F20_3 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
TAIR|locus:2194035351 AT1G18030 [Arabidopsis thalian 0.884 0.803 0.637 3.8e-94
UNIPROTKB|F1SIU8392 ILKAP "Uncharacterized protein 0.780 0.635 0.341 7.2e-36
UNIPROTKB|Q0IIF0370 ILKAP "Integrin-linked kinase- 0.774 0.667 0.342 1.2e-35
UNIPROTKB|E1BYA9392 ILKAP "Uncharacterized protein 0.777 0.632 0.328 2.4e-35
UNIPROTKB|E2RS11393 ILKAP "Uncharacterized protein 0.780 0.633 0.338 4e-35
UNIPROTKB|Q9H0C8392 ILKAP "Integrin-linked kinase- 0.780 0.635 0.338 4e-35
RGD|620128392 Ilkap "integrin-linked kinase- 0.780 0.635 0.338 8.3e-35
UNIPROTKB|Q9Z1Z6392 Ilkap "Integrin-linked kinase- 0.780 0.635 0.338 8.3e-35
MGI|MGI:1914694392 Ilkap "integrin-linked kinase- 0.780 0.635 0.334 1.1e-34
UNIPROTKB|F1SJH8293 LOC100737148 "Uncharacterized 0.670 0.730 0.369 2.2e-34
TAIR|locus:2194035 AT1G18030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 190/298 (63%), Positives = 220/298 (73%)

Query:    35 NENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXXPPNLRCAHFA 94
             N   EE   + +  ++ +F+ +EAD AEDKG+RHTME             P  LRCAHFA
Sbjct:    53 NREAEEDKPSFVSEEKKEFL-VEADVAEDKGARHTMEDVWVVLPDASLDFPGTLRCAHFA 111

Query:    95 IFDGHGGRLAAEYAQKRLHANVISAGLPR---------------FRKTDESLLQESVSGG 139
             I+DGHGGRLAAE+A+K LH NV+SAGLPR               FRKTDE LLQ+SVSGG
Sbjct:   112 IYDGHGGRLAAEFAKKHLHLNVLSAGLPRELLDVKVAKKAILEGFRKTDELLLQKSVSGG 171

Query:   140 WQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199
             WQDGATAVC+WIL + VFVANIGDAKAV+ARSS  +   NH +  + LKAIV+TR HKAI
Sbjct:   172 WQDGATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAI 231

Query:   200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFII 259
             YPQER+RIQKSGG +SSNGRLQGRLEVSRAFGDR FKKFGV ATPDIH+FE+TER++F+I
Sbjct:   232 YPQERSRIQKSGGVISSNGRLQGRLEVSRAFGDRHFKKFGVSATPDIHAFELTERENFMI 291

Query:   260 LGCDGLWGVFGPSDAVEFVQKLLKEGLSVTXXXXXXXXXXXXXXXCKDNCTAIVIIFR 317
             LGCDGLW VFGPSDAV FVQKLLKEGL V+               CKDNCTAIVI+F+
Sbjct:   292 LGCDGLWEVFGPSDAVGFVQKLLKEGLHVSTVSRRLVKEAVKERRCKDNCTAIVIVFK 349
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
UNIPROTKB|F1SIU8 ILKAP "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q0IIF0 ILKAP "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYA9 ILKAP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RS11 ILKAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H0C8 ILKAP "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|620128 Ilkap "integrin-linked kinase-associated serine/threonine phosphatase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Z1Z6 Ilkap "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914694 Ilkap "integrin-linked kinase-associated serine/threonine phosphatase 2C" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJH8 LOC100737148 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LMT1P2C08_ARATH3, ., 1, ., 3, ., 1, 60.70460.88400.8034yesno
Q0J2R1P2C67_ORYSJ3, ., 1, ., 3, ., 1, 60.70810.83380.7247yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00017748001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (378 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-63
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-55
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 3e-50
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 3e-41
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-29
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-24
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  201 bits (514), Expect = 1e-63
 Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 41/273 (15%)

Query: 61  AEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG 120
           ++  G R T EDA V+  +       N     F +FDGHGG  A E+A K L   ++   
Sbjct: 6   SDKGGDRKTNEDAVVIKPNL-----NNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 121 LPR---------------FRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGD 163
                             F + DE +L+E+       + G TAV   I G  ++VAN+GD
Sbjct: 61  EETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGD 120

Query: 164 AKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGR 223
           ++AV+ R+                +A+ +T+ HK +  +ER RI+K+GG VS NGR+ G 
Sbjct: 121 SRAVLCRNG---------------EAVQLTKDHKPVNEEERERIEKAGGRVS-NGRVPGV 164

Query: 224 LEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK 283
           L V+RA GD   K  GV A PD+   ++TE D F+IL  DGLW V    +AV+ V+  L 
Sbjct: 165 LAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELA 223

Query: 284 EGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF 316
           +   +   ++ LV  A L R   DN T +V+  
Sbjct: 224 KE-DLQEAAQELVDLA-LRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.91
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.82
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.77
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.64
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.47
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.26
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.6e-53  Score=393.26  Aligned_cols=247  Identities=36%  Similarity=0.632  Sum_probs=210.7

Q ss_pred             eeeEEEeeccCCCCCCCceEEEeccCCCC----CCCCCceeEEEEEcCCChhHHHHHHHHHHHHHHHHcc----------
Q 020944           55 EIEADAAEDKGSRHTMEDASVVLVDASSD----SPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG----------  120 (319)
Q Consensus        55 ~~~~g~~s~~G~R~~nED~~~~~~~~~~~----~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~----------  120 (319)
                      .+.+|.+|++|.|+.|||++++..++...    .+......||||||||||+.+|++|++++++.|.+..          
T Consensus        64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al  143 (365)
T PLN03145         64 VVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVV  143 (365)
T ss_pred             ceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHH
Confidence            45789999999999999999876543111    1122345799999999999999999999999886532          


Q ss_pred             CchhHhhhHHHHHhhhc-CCCCCCCeEEEEEEeCCeEEEEeeCCceEEEEeecccCCCCCCccccCceeEEecCCCCCCC
Q 020944          121 LPRFRKTDESLLQESVS-GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI  199 (319)
Q Consensus       121 ~~~~~~~~~~l~~~~~~-~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~LT~dH~~~  199 (319)
                      ...|..+++.+.+.... ....+|||++++++.++++|+|||||||+|+++.+               ++++||+||++.
T Consensus       144 ~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g---------------~~~~LT~DH~~~  208 (365)
T PLN03145        144 SSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG---------------KAIEMSRDHKPM  208 (365)
T ss_pred             HHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC---------------eEEEecCCCCCC
Confidence            11266777776654332 23458999999999999999999999999999998               999999999999


Q ss_pred             ChHHHHHHHHhCCEEeeCCeecCeeeccccccCccCCcC------CeeeeCeeEEEEecCCCeEEEEEcCCCccccCHHH
Q 020944          200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSD  273 (319)
Q Consensus       200 ~~~E~~ri~~~gg~v~~~~r~~g~l~~tRalGd~~~k~~------~v~~~Pdi~~~~l~~~d~~lvL~SDGl~d~ls~~e  273 (319)
                      ++.|+.||.+.||.+. .++++|.+++||+|||..+|..      +++++|++..+++.++|.|||||||||||+|++++
T Consensus       209 ~~~E~~RI~~~Gg~v~-~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee  287 (365)
T PLN03145        209 CSKERKRIEASGGYVY-DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQN  287 (365)
T ss_pred             CHHHHHHHHHcCCcee-cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHH
Confidence            9999999999999986 5789999999999999888643      47899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 020944          274 AVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  318 (319)
Q Consensus       274 i~~ii~~~~~~~~~~~~~a~~L~~~A~~~~g~~DNiTvivv~l~~  318 (319)
                      +++++...+....+|+++|+.|++.|+ .+++.||||||||+|++
T Consensus       288 ~v~~i~~~l~~~~~p~~aa~~Lv~~Al-~rgs~DNITvIVV~l~~  331 (365)
T PLN03145        288 AVDFARRRLQEHNDPVMCSKELVDEAL-KRKSGDNLAVVVVCFQS  331 (365)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHH-hCCCCCCEEEEEEEeec
Confidence            999998877666689999999999998 69999999999999974

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-23
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-19
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-19
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 5e-16
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 9e-15
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-14
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-14
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-14
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-11
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-11
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 2e-11
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 5e-11
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 6e-11
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 6e-11
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 6e-11
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 6e-11
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 6e-11
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 2e-06
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-05
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-05
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 111/237 (46%), Gaps = 51/237 (21%)
Query: 89  RCAHFAIFDGHGGRLAAEYAQKRLHA---NVISAGLPRFRKT--------DESLLQESV- 136
           +C+ FA++DGHGG   A+Y    L      V + G   F K         D +LLQE V 
Sbjct: 50  QCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVI 109
Query: 137 ------SG---------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHL 181
                 SG         G   G TAV   + G+ ++VAN GD++ VV R+          
Sbjct: 110 EELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG--------- 160
Query: 182 DELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK----- 236
                 KA+ ++  HK     E  RI+K+GG V+ +GR+ G L +SRA GD  +K     
Sbjct: 161 ------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSL 214
Query: 237 ---KFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQ-KLLKEGLSVT 289
              +  + A PDI    V   D F++L CDG+W        V+FVQ ++ K G+ ++
Sbjct: 215 PAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLS 271
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 9e-74
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-72
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 6e-72
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 9e-72
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-71
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-71
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-70
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 5e-62
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 3e-51
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 7e-51
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 4e-43
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 4e-42
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 6e-30
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-05
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-06
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-04
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
 Score =  228 bits (584), Expect = 9e-74
 Identities = 76/293 (25%), Positives = 125/293 (42%), Gaps = 53/293 (18%)

Query: 60  AAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANV--- 116
            +  +G R  MEDA   +V            + FA++DGH G   A Y    L  ++   
Sbjct: 28  LSSMQGWRVEMEDAHTAVVGIPHGLED---WSFFAVYDGHAGSRVANYCSTHLLEHITTN 84

Query: 117 -------------------ISAGLPR-FRKTDESLLQ--ESVSGGWQDGATAVCIWILGR 154
                              +  G+   F K DE +    +  +G  + G+TAV + I  +
Sbjct: 85  EDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPK 144

Query: 155 TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV 214
            ++  N GD++AV+ R+                +    T+ HK   P+E+ RIQ +GG+V
Sbjct: 145 HIYFINCGDSRAVLYRNG---------------QVCFSTQDHKPCNPREKERIQNAGGSV 189

Query: 215 SSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILGCDGLW 266
               R+ G L VSRA GD  +K           V   P+++     E D FIIL CDG+W
Sbjct: 190 -MIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIW 248

Query: 267 GVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK 319
            V    +  E+V+  L+    +  V   +V    L +  +DN + +++ F ++
Sbjct: 249 DVMSNEELCEYVKSRLEVSDDLENVCNWVVDTC-LHKGSRDNMSIVLVCFSNE 300
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.86
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.84
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.72
3f79_A255 Probable two-component response regulator; adaptor 99.68
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.25
3eq2_A394 Probable two-component response regulator; adaptor 98.3
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=8e-52  Score=381.29  Aligned_cols=246  Identities=30%  Similarity=0.480  Sum_probs=209.6

Q ss_pred             cceeeEEEeeccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEcCCChhHHHHHHHHHHHHHHHHc--cC---------
Q 020944           53 FVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISA--GL---------  121 (319)
Q Consensus        53 ~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~--~~---------  121 (319)
                      ...+.+|+++++|+|+.|||++++..+.+.   ......+|+|||||||+.+|++|++.+++.|.+.  +.         
T Consensus        21 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~---~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~   97 (307)
T 2p8e_A           21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPH---GLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSAL   97 (307)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETT---TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC---------
T ss_pred             CCCeeEEEEecCCCCCcccceEEEEecCCC---CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccc
Confidence            357889999999999999999998654311   1235689999999999999999999999988652  21         


Q ss_pred             ------------chhHhhhHHHHHhhhc--CCCCCCCeEEEEEEeCCeEEEEeeCCceEEEEeecccCCCCCCccccCce
Q 020944          122 ------------PRFRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL  187 (319)
Q Consensus       122 ------------~~~~~~~~~l~~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~  187 (319)
                                  ..|..+++.+.+....  ....+|||++++++.++++|+|||||||+|++|++               
T Consensus        98 ~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g---------------  162 (307)
T 2p8e_A           98 ELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG---------------  162 (307)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC---------------
Confidence                        1156666666654322  23468999999999999999999999999999998               


Q ss_pred             eEEecCCCCCCCChHHHHHHHHhCCEEeeCCeecCeeeccccccCccCCcC--------CeeeeCeeEEEEecCCCeEEE
Q 020944          188 KAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVTERDHFII  259 (319)
Q Consensus       188 ~~~~LT~dH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~~tRalGd~~~k~~--------~v~~~Pdi~~~~l~~~d~~lv  259 (319)
                      ++.+||+||++.++.|+.||..+||.+. ..|++|.+.+||||||..+|..        .++++|++..+++.++|+|||
T Consensus       163 ~~~~lT~DH~~~~~~E~~rI~~~gg~v~-~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~ll  241 (307)
T 2p8e_A          163 QVCFSTQDHKPCNPREKERIQNAGGSVM-IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFII  241 (307)
T ss_dssp             EEEEECCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEE
T ss_pred             ccccCCCCCCCCCHHHHHHHHHcCCEEE-eCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEE
Confidence            9999999999999999999999999987 5699999999999999988853        378999999999999888999


Q ss_pred             EEcCCCccccCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 020944          260 LGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  318 (319)
Q Consensus       260 L~SDGl~d~ls~~ei~~ii~~~~~~~~~~~~~a~~L~~~A~~~~g~~DNiTvivv~l~~  318 (319)
                      ||||||||+|+++|+++++...+....+++.+|+.|++.|+ .+|+.||||||||++.+
T Consensus       242 L~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~  299 (307)
T 2p8e_A          242 LACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCL-HKGSRDNMSIVLVCFSN  299 (307)
T ss_dssp             EECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEEC--
T ss_pred             EECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HcCCCCCeEEEEEECCC
Confidence            99999999999999999998876556689999999999997 69999999999999864
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 319
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 6e-37
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 7e-16
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (331), Expect = 6e-37
 Identities = 77/286 (26%), Positives = 122/286 (42%), Gaps = 49/286 (17%)

Query: 60  AAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISA 119
            +  +G R  MEDA   ++   S        + FA++DGH G   A+Y  + L  ++ + 
Sbjct: 25  LSSMQGWRVEMEDAHTAVIGLPSGLE---SWSFFAVYDGHAGSQVAKYCCEHLLDHITNN 81

Query: 120 GLPRFRKTDESL--------------------LQESVSGGWQDGATAVCIWILGRTVFVA 159
              +      S+                    + E   G  + G+TAV + I  +  +  
Sbjct: 82  QDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFI 141

Query: 160 NIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGR 219
           N GD++ ++ R+  V                  T+ HK   P E+ RIQ +GG+V    R
Sbjct: 142 NCGDSRGLLCRNRKV---------------HFFTQDHKPSNPLEKERIQNAGGSVM-IQR 185

Query: 220 LQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVT-ERDHFIILGCDGLWGVFG 270
           + G L VSRA GD  +K           V   P++H  E + E D FIIL CDG+W V G
Sbjct: 186 VNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMG 245

Query: 271 PSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF 316
             +  +FV+  L+    +  V   +V    L +  +DN + I+I F
Sbjct: 246 NEELCDFVRSRLEVTDDLEKVCNEVVDTC-LYKGSRDNMSVILICF 290
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-55  Score=401.57  Aligned_cols=246  Identities=31%  Similarity=0.502  Sum_probs=213.9

Q ss_pred             cceeeEEEeeccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEcCCChhHHHHHHHHHHHHHHHHccCc----------
Q 020944           53 FVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP----------  122 (319)
Q Consensus        53 ~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~s~~a~~~l~~~l~~~~~~----------  122 (319)
                      ...+.+|+++++|+|++|||++++..+.+   ....++.||||||||||+.+|+++++.+++.|.+....          
T Consensus        18 ~~~~~~g~~s~~G~R~~~ED~~~~~~~~~---~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~   94 (295)
T d1a6qa2          18 GNGLRYGLSSMQGWRVEMEDAHTAVIGLP---SGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVE   94 (295)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEET---TTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHH
T ss_pred             CCceEEEEEeCccCCCcccCeeEEEcccC---CCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHH
Confidence            35678999999999999999999876542   13346789999999999999999999999988654211          


Q ss_pred             --------hhHhhhHHHHHhh--hcCCCCCCCeEEEEEEeCCeEEEEeeCCceEEEEeecccCCCCCCccccCceeEEec
Q 020944          123 --------RFRKTDESLLQES--VSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV  192 (319)
Q Consensus       123 --------~~~~~~~~l~~~~--~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~L  192 (319)
                              .|..+++.+....  ......+|||++++++.++++|+|||||||+|+++++               .+.+|
T Consensus        95 ~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~---------------~~~~l  159 (295)
T d1a6qa2          95 NVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF  159 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------EEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc---------------cceee
Confidence                    1555565554332  2344568999999999999999999999999999998               99999


Q ss_pred             CCCCCCCChHHHHHHHHhCCEEeeCCeecCeeeccccccCccCCcC--------CeeeeCeeEEEEec-CCCeEEEEEcC
Q 020944          193 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVT-ERDHFIILGCD  263 (319)
Q Consensus       193 T~dH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~~tRalGd~~~k~~--------~v~~~Pdi~~~~l~-~~d~~lvL~SD  263 (319)
                      |.||++.++.|+.||.+.||.+. ..|++|.+++||+|||+.+|..        .++++|+|..+.+. ++++|||||||
T Consensus       160 T~dH~~~~~~E~~Ri~~~gg~v~-~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SD  238 (295)
T d1a6qa2         160 TQDHKPSNPLEKERIQNAGGSVM-IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACD  238 (295)
T ss_dssp             CCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECH
T ss_pred             ccccCcccHHHHhhHhhcCCccc-ccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecC
Confidence            99999999999999999999996 6799999999999999999854        39999999999986 66779999999


Q ss_pred             CCccccCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 020944          264 GLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  318 (319)
Q Consensus       264 Gl~d~ls~~ei~~ii~~~~~~~~~~~~~a~~L~~~A~~~~g~~DNiTvivv~l~~  318 (319)
                      ||||+|+++|++++++..+....+++.+|+.|++.|+ .+++.||||||||+|++
T Consensus       239 Gl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~gs~DNiTvivv~~~~  292 (295)
T d1a6qa2         239 GIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-YKGSRDNMSVILICFPN  292 (295)
T ss_dssp             HHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEECTT
T ss_pred             cccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH-hcCCCCCeEEEEEeccC
Confidence            9999999999999999888777889999999999998 69999999999999985
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure