Citrus Sinensis ID: 020968

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKSLTF
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHccccccccHHHHHHHHHHHccccccEEEcccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHcccEEEEEcccccccccccHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccEEEEcccccccccccccEEEEEEccccHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccEcccHHHHccccHHHHHHHHHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccHHHEEEEcHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHcccEEEEEEccHHHcccccHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEccccccEcccccccHEccccccccEEEEEcccHHHcccccEEEEEEcccHHHHHHHHHHHHHHHccccccHcHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mengggangnqwgfkaneelktasgiTVRGVLNSLLEnlnkndtrpliplghgdpsafpsfrtASVAVDAIVHSVRSARfncysstvgiLPARRAIADYLnrdlpyklspddvyltLGCTQAIEVILTVLarpganillprpgfpyyearathshlevrhfdllpakgwevDLDAVEALADENTVALVIInpgnpcgnvyTYQHLQKIAETAKKLGIMVIADEVydhlafgntpfvpmgvfgsIVPVLtlgsiskrwivpgwrlgwlvtsdpngilqdsgivDSIKSFlnissdpaTFIQFLKSSRKlkrnsflksltf
Flexible Loop (DISEMBL)
mengggangnqwGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFlkssrklkrnsflksltf
Low Complexity Region (SEG)
MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKSLTF
Disordered region (IsUnstruct)
*************F*****LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFL*****************
Disordered Region (DISOPRED)
**********************ASGITVRGVLNSLL********RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKSLTF
Disordered Region (DISEMBL)
MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKSLTF
Disordered Region (DISPRO)
***********WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKSLTF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKSLTF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
Q9LVY1	420	Tyrosine aminotransferase	yes	no	0.924	0.702	0.614	1e-110
Q9FN30	414	Probable aminotransferase	no	no	0.874	0.673	0.656	1e-107
Q9SIV0	462	S-alkyl-thiohydroximate l	no	no	0.952	0.658	0.564	1e-106
Q67Y55	449	Probable aminotransferase	no	no	0.956	0.679	0.555	1e-103
Q9ST03	551	Nicotianamine aminotransf	N/A	no	0.909	0.526	0.568	4e-97
Q9ST02	461	Nicotianamine aminotransf	N/A	no	0.927	0.642	0.549	2e-96
Q9SK47	445	Probable aminotransferase	no	no	0.921	0.660	0.525	8e-91
Q8VYP2	424	Probable aminotransferase	no	no	0.884	0.665	0.460	8e-73
Q9SUR6	422	Cystine lyase CORI3 OS=Ar	no	no	0.827	0.625	0.483	6e-72
Q58CZ9	447	Tyrosine aminotransferase	yes	no	0.890	0.635	0.385	8e-56

>sp|Q9LVY1|TAT_ARATH Tyrosine aminotransferase OS=Arabidopsis thaliana GN=TAT PE=2 SV=1

 Score =  399 bits (1026), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 182/296 (61%), Positives = 237/296 (80%), Gaps = 1/296 (0%)

Query: 6   GANG-NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTA 64
           G NG  +W F ANE ++ ++ +T+R  LN+L+  L+  D RP+IPLGHGDPS FPSFRT 
Sbjct: 2   GENGAKRWNFGANEVVERSNSLTIRDYLNTLINCLDGGDVRPVIPLGHGDPSPFPSFRTD 61

Query: 65  SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124
             AV+AI  +VRS +FN YSS+ G+  AR+A+A+YL+ DL Y++SP+DV++T GC QAIE
Sbjct: 62  QAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIE 121

Query: 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184
           ++++ LA PGANILLPRP +P Y++RA    LEVR+FDLLP  GW+VDLD VEALAD+ T
Sbjct: 122 ILISALAIPGANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKT 181

Query: 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244
           VA+++INP NPCGNV++ QHLQKIAETA KLGI+VIADEVYDH AFG+ PFV M  F  +
Sbjct: 182 VAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAEL 241

Query: 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           VPV+ LG+ISKRW VPGWRLGW+VT DP+GI++DSG V ++ + +N+S+DPATFIQ
Sbjct: 242 VPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQ 297

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using L-glutamate in vitro. Can convert phenylalanine to phenylpyruvate and catalyze the reverse reaction in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 5

>sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1

 Score =  389 bits (999), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/282 (65%), Positives = 226/282 (80%), Gaps = 3/282 (1%)

Query: 22  TASGITVRGVLNSLLENLNKNDT---RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA 78
           T S IT++G+L+ L+E++   +    + +I LG GDP+ +  FRT  V++ A+  S+ S 
Sbjct: 7   TTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQAVSDSLLSN 66

Query: 79  RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138
           +F+ YS TVG+  ARRAIA+YL+RDLPYKLS DDV++T GCTQAI+V L++LARP ANIL
Sbjct: 67  KFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSMLARPRANIL 126

Query: 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN 198
           LPRPGFP YE  A   HLEVR+ DLLP  GWE+DLDAVEALADENTVALV+INPGNPCGN
Sbjct: 127 LPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVINPGNPCGN 186

Query: 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258
           VY+YQHL KIAE+AKKLG +VIADEVY HLAFG+ PFVPMGVFGSIVPVLTLGS+SKRWI
Sbjct: 187 VYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRWI 246

Query: 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           VPGWRLGW VT+DP+G  +D  I++  K + +I   PATFIQ
Sbjct: 247 VPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQ 288

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SIV0|SUR1_ARATH S-alkyl-thiohydroximate lyase SUR1 OS=Arabidopsis thaliana GN=SUR1 PE=1 SV=1

 Score =  384 bits (987), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/312 (56%), Positives = 232/312 (74%), Gaps = 8/312 (2%)

Query: 12  WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
           W F  +++   AS +T+RGV+  L +N  K+  + ++PLGHGDPS +P FRT   A DA+
Sbjct: 33  WRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAV 92

Query: 72  VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
           V  +RS + N Y    GILPARRA+ADY+NRDLP+KL+P+D++LT GC Q IE++   LA
Sbjct: 93  VDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLA 152

Query: 132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
           RP ANILLPRPGFP+Y+ARA +S LEVR FDLLP K WE+DL+ +EA+ADENTVA+V+IN
Sbjct: 153 RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVIN 212

Query: 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
           P NPCGNVY++ HL+K+AETA+KLGIMVI+DEVYD   FG+ PFV MG F SIVPVLTL 
Sbjct: 213 PNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLA 272

Query: 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ-----FLKSSR 306
            ISK W+VPGW++GW+  +DP G+ + + ++ SIK  L+++ DPAT IQ      L+ + 
Sbjct: 273 GISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD 332

Query: 307 K---LKRNSFLK 315
           K    K+N  LK
Sbjct: 333 KNFFAKKNKILK 344

C-S lyase involved in glucosinolate biosynthesis. Converts S-(alkylacetohydroximoyl)-L-cysteine to thiohydroximate. Functions in auxin homeostasis. Probably required for glucosinolate activation in response to pathogens.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q67Y55|TAT1_ARATH Probable aminotransferase TAT1 OS=Arabidopsis thaliana GN=At4g28420 PE=2 SV=1

 Score =  374 bits (960), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/313 (55%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 12  WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
           W F+ ++    AS +T+R ++  L +  + +  +PL+PL HGDPS +P +RT+ +  +A+
Sbjct: 27  WRFRGSDNAAKASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENAV 86

Query: 72  VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
           V  +RS + N Y    GILPAR+A+ADY+NRDL  K+ P+DV++T+GC Q IEV+L  LA
Sbjct: 87  VDVLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLA 146

Query: 132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
           RP ANILLPRP +P+YEARA +S LEVR FDLLP K WE+DL  +EA+ADENTVA+VIIN
Sbjct: 147 RPNANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIIN 206

Query: 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
           P NPCGNVY+Y HL+K+AETAKKLGIMVI DEVY    FG+ PFVPMG F SI PV+TLG
Sbjct: 207 PNNPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLG 266

Query: 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ------FLKSS 305
            ISK WIVPGWR+GW+  +DP GIL+ +G+V SI+  L+I+ D  T +Q        K++
Sbjct: 267 GISKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAALPEILGKAN 326

Query: 306 RKL--KRNSFLKS 316
           ++L  K+NS LK 
Sbjct: 327 KELFAKKNSMLKQ 339

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ST03|NAATB_HORVU Nicotianamine aminotransferase B OS=Hordeum vulgare GN=naat-B PE=1 SV=2

 Score =  354 bits (909), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 167/294 (56%), Positives = 225/294 (76%), Gaps = 4/294 (1%)

Query: 11  QWGFKANEE---LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVA 67
           +W F   ++     T + +++R +   +  ++ +   RP++PL HGDPS FP+FRTA  A
Sbjct: 131 EWNFAGAKDGVLAATGANMSIRAIRYKISASVQEKGPRPVLPLAHGDPSVFPAFRTAVEA 190

Query: 68  VDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127
            DA+  +VR+ +FNCY + VG+  AR A+A++L++ +PY LS DDV+LT G TQAIEVI+
Sbjct: 191 EDAVAAAVRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVII 250

Query: 128 TVLAR-PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186
            VLA+  GANILLPRPG+P YEARA  + LEVRHFDL+P KGWE+D+D++E++AD+NT A
Sbjct: 251 PVLAQTAGANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTA 310

Query: 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246
           +VIINP NPCG+VY+Y HL K+AE AK+LGI+VIADEVY  L  G+ PF+PMGVFG I P
Sbjct: 311 MVIINPNNPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITP 370

Query: 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           VL++GS+SK WIVPGWRLGW+   DP  ILQ++ I  SI ++LN+S+DPATFIQ
Sbjct: 371 VLSIGSLSKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQ 424

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9ST02|NAATA_HORVU Nicotianamine aminotransferase A OS=Hordeum vulgare GN=naat-A PE=1 SV=2

 Score =  352 bits (903), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 168/306 (54%), Positives = 231/306 (75%), Gaps = 10/306 (3%)

Query: 5   GGANGN------QWGFKANEE---LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP 55
           G +NG+      +W F   ++     T +  ++R +   +  ++ ++  RP++PL HGDP
Sbjct: 29  GKSNGHAAAAAVEWNFARGKDGILATTGAKNSIRAIRYKISASVEESGPRPVLPLAHGDP 88

Query: 56  SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL 115
           S FP+FRTA  A DA+  ++R+ +FNCY++ VG+  AR A+A++L++ +PYKLS DDV+L
Sbjct: 89  SVFPAFRTAVEAEDAVAAALRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFL 148

Query: 116 TLGCTQAIEVILTVLAR-PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174
           T G TQAIEVI+ VLA+  GANILLPRPG+P YEARA  + LEVRHFDL+P KGWE+D+D
Sbjct: 149 TAGGTQAIEVIIPVLAQTAGANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDID 208

Query: 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP 234
           ++E++AD+NT A+VIINP NPCG+VY+Y HL K+AE A+KLGI+VIADEVY  L  G+ P
Sbjct: 209 SLESIADKNTTAMVIINPNNPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAP 268

Query: 235 FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSD 294
           F+PMGVFG I PVL++GS+SK WIVPGWRLGW+   DP  IL+ + I  SI ++LN+S+D
Sbjct: 269 FIPMGVFGHIAPVLSIGSLSKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTD 328

Query: 295 PATFIQ 300
           PATF+Q
Sbjct: 329 PATFVQ 334

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9SK47|TAT3_ARATH Probable aminotransferase TAT3 OS=Arabidopsis thaliana GN=TAT3 PE=2 SV=1

 Score =  333 bits (855), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 155/295 (52%), Positives = 212/295 (71%), Gaps = 1/295 (0%)

Query: 7   ANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASV 66
           AN N W FK N     A+ +T+R +   + +N   N  + ++    G+PSA  +FRT   
Sbjct: 11  ANANVWRFKGNGATSDAAAVTLRKLAFGMFKNCTMNSGKTILFPTPGEPSAHSNFRTCPE 70

Query: 67  AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126
           A +A+  + RS   N Y+ + G+  ARRA+A+YLN +LP KL  +DVY+T GC QAIE++
Sbjct: 71  AEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEIV 130

Query: 127 LTVLA-RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185
           +  LA  P ANILLPRPG+P+Y+ARA +S LE+R +DLLP   WE++LD +EA ADENTV
Sbjct: 131 IDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENTV 190

Query: 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
           A+VIINP NPCGNVYTY HL K+AE A+KLGIM+I+DEVYDH+ +G+ PF+PMG F SI 
Sbjct: 191 AMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASIA 250

Query: 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           PV+TLGSISK W+ PGWR+GW+  +DPNGI   +G+V +I+ FL+++  P+  +Q
Sbjct: 251 PVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSFILQ 305

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP2|TAT4_ARATH Probable aminotransferase TAT4 OS=Arabidopsis thaliana GN=At4g23590 PE=2 SV=1

 Score =  274 bits (700), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 133/289 (46%), Positives = 193/289 (66%), Gaps = 7/289 (2%)

Query: 12  WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
           W F  ++  + A+  ++ G  +S + +L     +P++P    +        T+  A  A+
Sbjct: 9   WQFSGSDAAEKAAQASL-GTYSSEIFSLCDPQGKPILPPLSEEA------ETSHTAEKAV 61

Query: 72  VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
           V +V     N Y+ ++G+  A+RA+A+YLNRDL  KL+ DDVY+T+GC QAIE+ +++LA
Sbjct: 62  VKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQAIELAVSILA 121

Query: 132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
           +P ANILLPRPGFP+    + + HLEVR ++ +P + +E+D ++V  + DENT A+ IIN
Sbjct: 122 KPKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVDENTFAIFIIN 181

Query: 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
           P NP GN YT  HL+++A  A++LGIMV++DEVY    FG+ PFVPMG F SIVPV+TLG
Sbjct: 182 PHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKFSSIVPVITLG 241

Query: 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           SISK WIVPGWR GWL   D NG+ + + ++ + K FL I+S P T IQ
Sbjct: 242 SISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQ 290

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SUR6|CORI3_ARATH Cystine lyase CORI3 OS=Arabidopsis thaliana GN=CORI3 PE=1 SV=1

 Score =  271 bits (692), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 133/275 (48%), Positives = 188/275 (68%), Gaps = 11/275 (4%)

Query: 52  HGDPSAFPS---FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKL 108
           HG P   P      T++ A  A+V +V     N Y+ ++G+  A+ A+A+YLN+ LP KL
Sbjct: 39  HGKPILPPRNEILETSNTAEKAVVKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKL 98

Query: 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG 168
           + DDV++TLGC QAIE+ + +LA+P AN+LLP PGFP+   R+ + +LEVRH++ LP K 
Sbjct: 99  TADDVFMTLGCKQAIELAVDILAKPKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEKN 158

Query: 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL 228
           +E+D D+V AL DENT A+ IINP NP GN Y+  HL+++AE AK+L IMV++DEV+   
Sbjct: 159 FEIDFDSVRALVDENTFAIFIINPHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRWT 218

Query: 229 AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF 288
            FG+ PFVPMG F SIVPV+TLGSISK W VPGWR GWL   D +G+ +++ ++ + + F
Sbjct: 219 LFGSNPFVPMGKFSSIVPVVTLGSISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQDF 278

Query: 289 LNISSDPATFIQ------FLKSSRKL--KRNSFLK 315
           L I+++P T IQ        K+ ++   KR SFLK
Sbjct: 279 LQINNNPPTVIQAAIPDILEKTPQEFFDKRQSFLK 313

Possesses cystine lyase and tyrosine aminotransferase activities in vitro. May be required for the synthesis of homogentisate a precursor of tocopherols and plastoquinones.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q58CZ9|ATTY_BOVIN Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=2 SV=1

 Score =  217 bits (553), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 115/298 (38%), Positives = 172/298 (57%), Gaps = 14/298 (4%)

Query: 28  VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV 87
           +R +++++    N N T  +I L  GDP+ F +  T      A+  ++ S +FN Y  ++
Sbjct: 49  IRAIVDNMKVKPNPNKT--MIALSIGDPTVFGNLPTDPEVTQAMKDALDSGKFNGYVPSI 106

Query: 88  GILPARRAIADYLNR-DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
           G L +R  +A Y +  + P  L   DV LT GC+QAIE+ L VLA PG NIL+PRPGF  
Sbjct: 107 GYLSSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILVPRPGFSL 164

Query: 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206
           Y   A    +EV+ ++LLP K WE+DL  +E+L DE TV L++ NP NPCG+V++ +HLQ
Sbjct: 165 YRTLAESMGIEVKLYNLLPEKNWEIDLKQLESLIDEKTVCLIVNNPSNPCGSVFSRRHLQ 224

Query: 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
           KI   A +  + ++ADE+Y  + F ++ F P+    S VP+L+ G ++KRW+VPGWR+GW
Sbjct: 225 KILAVAARQCVPILADEIYGDMVFSDSKFEPLATLSSKVPILSCGGLAKRWLVPGWRMGW 284

Query: 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ------FLKSSRKLKRN--SFLKS 316
           ++  D   I  +  I D +         P T +Q        ++ R    N  SFLKS
Sbjct: 285 ILIHDRRDIFGNE-IRDGLTKLSQRILGPCTLVQGALKSILCRTPRVFYHNTLSFLKS 341

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using glutamic acid, with 2-oxoglutarate as cosubstrate (in vitro). Has no transaminase activity towards phenylalanine.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
224133454	418	aminotransferase family protein [Populus	0.927	0.708	0.793	1e-143
255553657	419	tyrosine aminotransferase, putative [Ric	0.931	0.708	0.776	1e-136
225446437	419	PREDICTED: tyrosine aminotransferase [Vi	0.931	0.708	0.726	1e-131
224133458	418	aminotransferase family protein [Populus	0.927	0.708	0.754	1e-130
359485208	419	PREDICTED: LOW QUALITY PROTEIN: tyrosine	0.931	0.708	0.72	1e-128
302143324	360	unnamed protein product [Vitis vinifera]	0.931	0.825	0.72	1e-128
325516250	422	tyrosine aminotransferase 2 [Solanum pen	0.940	0.710	0.713	1e-126
147811786	365	hypothetical protein VITISV_034866 [Viti	0.918	0.802	0.713	1e-125
224133450	417	aminotransferase family protein [Populus	0.962	0.736	0.676	1e-124
225446435	419	PREDICTED: tyrosine aminotransferase iso	0.931	0.708	0.703	1e-121

>gi|224133454|ref|XP_002328046.1| aminotransferase family protein [Populus trichocarpa] gi|222837455|gb|EEE75834.1| aminotransferase family protein [Populus trichocarpa]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/300 (79%), Positives = 271/300 (90%), Gaps = 4/300 (1%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENG      +WGF+AN+ L T+S +TVRGVLN L +NLNK DTR ++PL HGDPSAFP 
Sbjct: 1   MENGS----KKWGFQANKSLSTSSAVTVRGVLNVLQDNLNKEDTRQVMPLAHGDPSAFPC 56

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           FRT +VA +A+V +VRSA++N Y+ TVG+LPARR++AD+LNRDLPYKLSPDDV+LTLGCT
Sbjct: 57  FRTTTVADEAVVDAVRSAKYNHYAPTVGLLPARRSVADFLNRDLPYKLSPDDVFLTLGCT 116

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
           QAIE+ +TVLARPGANILLPRPGFPYYEARA HSHLE RHFDL+P KGWEVDLDAVEALA
Sbjct: 117 QAIEITITVLARPGANILLPRPGFPYYEARAAHSHLEARHFDLIPEKGWEVDLDAVEALA 176

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
           DENTVA+V+INPGNPCG+VY+YQHLQKIAETA+KLGIMVIADEVY HL FGN+PFVPMGV
Sbjct: 177 DENTVAMVVINPGNPCGSVYSYQHLQKIAETARKLGIMVIADEVYGHLTFGNSPFVPMGV 236

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           FGSIVPVLTLGSISKRWIVPGWR+GWLVTSDPNGILQ+SG+V+SIK  LNISSDP TFIQ
Sbjct: 237 FGSIVPVLTLGSISKRWIVPGWRIGWLVTSDPNGILQESGVVESIKGCLNISSDPVTFIQ 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553657|ref|XP_002517869.1| tyrosine aminotransferase, putative [Ricinus communis] gi|223542851|gb|EEF44387.1| tyrosine aminotransferase, putative [Ricinus communis]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/300 (77%), Positives = 263/300 (87%), Gaps = 3/300 (1%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENG      +WGF+ANE L  A+ +TVRGVL++L  NLNK D R +IPLGHGDPSAFPS
Sbjct: 1   MENG---VSTKWGFRANEGLTAAAAVTVRGVLDALNSNLNKEDERTVIPLGHGDPSAFPS 57

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           F TAS A DAIV +++SA++NCYS TVG+LPARRAIADYLN DLPY+LSPDDV++TLGCT
Sbjct: 58  FLTASAAEDAIVDALKSAKYNCYSPTVGLLPARRAIADYLNIDLPYELSPDDVFVTLGCT 117

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
           QAIEV LTVL RPGANILLPRPGFPYY   A  +HLEVRHFDLLP KGWEV+ +AVEALA
Sbjct: 118 QAIEVSLTVLGRPGANILLPRPGFPYYTGIAAQTHLEVRHFDLLPEKGWEVNFEAVEALA 177

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
           DENT A+VIINPGNPCGNVY+Y+HL+KIAETA+KLGI+VIADEVY HL FG+TPFVPMGV
Sbjct: 178 DENTAAMVIINPGNPCGNVYSYEHLKKIAETARKLGILVIADEVYAHLTFGSTPFVPMGV 237

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           FGS+VPVLTLGSISKRWIVPGWRLGWLV SDP GILQ++G+VDSI S LNISSDPATFIQ
Sbjct: 238 FGSVVPVLTLGSISKRWIVPGWRLGWLVLSDPKGILQETGVVDSITSCLNISSDPATFIQ 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446437|ref|XP_002276551.1| PREDICTED: tyrosine aminotransferase [Vitis vinifera] gi|302143331|emb|CBI21892.3| unnamed protein product [Vitis vinifera]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 218/300 (72%), Positives = 264/300 (88%), Gaps = 3/300 (1%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENG   +  +WGF+ N+EL  A+ +T+RGVL  ++ NL++ D RP+IPLGHGDPSAFP 
Sbjct: 1   MENG---SKKRWGFQGNQELNMAAAVTIRGVLGKVMSNLSEEDNRPVIPLGHGDPSAFPC 57

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           FRT  VA DAI  +VRSA+FN Y+ TVG+LPARRA+A+YL+RDLPY+LSPDD+YLT+GCT
Sbjct: 58  FRTTPVAEDAIADAVRSAKFNSYAPTVGLLPARRAVAEYLSRDLPYQLSPDDIYLTIGCT 117

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
           QAIE+++ VLARPGANILLPRPGFPYYEARA   +LEVRHFDLLP +GWEVDL+AV+ALA
Sbjct: 118 QAIEIMIQVLARPGANILLPRPGFPYYEARAAADNLEVRHFDLLPEQGWEVDLEAVKALA 177

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
           DENTVA+VI+NPGNP G+V+TY+HL+K+AETA+ LGIMVI+DEVY HLAFG+ PFVPMGV
Sbjct: 178 DENTVAMVIVNPGNPSGSVFTYEHLKKVAETARNLGIMVISDEVYGHLAFGSKPFVPMGV 237

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           FGSIVP++T+GSISKRW+VPGWRLGWLVT+D NGIL  SG+V+SI S LNISSDPATFIQ
Sbjct: 238 FGSIVPIVTVGSISKRWVVPGWRLGWLVTNDLNGILHKSGVVESIISCLNISSDPATFIQ 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133458|ref|XP_002328047.1| aminotransferase family protein [Populus trichocarpa] gi|222837456|gb|EEE75835.1| aminotransferase family protein [Populus trichocarpa]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/301 (75%), Positives = 257/301 (85%), Gaps = 5/301 (1%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENG      +W F+A++ + + + ITVRGVLN L E LNK D R +IPL HGDPSAFP 
Sbjct: 1   MENGT----EKWSFQASKGMNSTASITVRGVLNRLAETLNKEDKREVIPLAHGDPSAFPC 56

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           FRT  VA +AI  +VRSA+ N Y+ TVG+LPARRA ADYLNRDLPYKLSPDDV+LTLGC 
Sbjct: 57  FRTTPVADEAIFDAVRSAKNNHYAPTVGLLPARRAAADYLNRDLPYKLSPDDVFLTLGCK 116

Query: 121 QAIEVILTVLAR-PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179
           QAIE+ +TVLA  PGAN+LLPRPGFPYYEARA HS L+VRHFDLLP KGWEVDL+AVEAL
Sbjct: 117 QAIEIAVTVLAAIPGANVLLPRPGFPYYEARAAHSCLDVRHFDLLPEKGWEVDLEAVEAL 176

Query: 180 ADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG 239
           ADENTVA+VIINPGNPCG+VY+YQHL+K+AETA+ LGIMVI+DEVY HL FG+ PFVPMG
Sbjct: 177 ADENTVAMVIINPGNPCGSVYSYQHLEKVAETARMLGIMVISDEVYGHLTFGSAPFVPMG 236

Query: 240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFI 299
           VF S VPVLTLGSISKRWIVPGWR+GWLVT+DPNGILQDSGIV SIK +LNISSDP TFI
Sbjct: 237 VFASTVPVLTLGSISKRWIVPGWRMGWLVTNDPNGILQDSGIVASIKDYLNISSDPPTFI 296

Query: 300 Q 300
           Q
Sbjct: 297 Q 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485208|ref|XP_003633232.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine aminotransferase-like [Vitis vinifera]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/300 (72%), Positives = 257/300 (85%), Gaps = 3/300 (1%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENGG     +WGF+ NEEL  A+ IT+RGVLN ++ NLN  D RP+IPLGHGDPSAF  
Sbjct: 1   MENGGR---KRWGFQGNEELDKAASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSC 57

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           FRT  VA DAIV ++RS +FN Y+  VGILPARRAIA++L+ DLPYKLSPDD++LT+GC+
Sbjct: 58  FRTTPVAEDAIVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCS 117

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
           QAIE+I+ VLARPGANILLPRPG+P+YE+ A  +HLE RHFDLLP KGWEVDL+ V+ALA
Sbjct: 118 QAIELIIKVLARPGANILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKALA 177

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
           DENTVA+VIINPGNPCGN++T++HL+K+AETA+ LGI+VI+DEVY HLAFG  P+V MG 
Sbjct: 178 DENTVAMVIINPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVSMGA 237

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           FGSI PV+TLGSISKRWIVPGWRLGWLVT+DPNGIL  SG+V+SI S LNISSDPATFIQ
Sbjct: 238 FGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFIQ 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143324|emb|CBI21885.3| unnamed protein product [Vitis vinifera]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/300 (72%), Positives = 257/300 (85%), Gaps = 3/300 (1%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENGG     +WGF+ NEEL  A+ IT+RGVLN ++ NLN  D RP+IPLGHGDPSAF  
Sbjct: 1   MENGGR---KRWGFQGNEELDKAASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSC 57

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           FRT  VA DAIV ++RS +FN Y+  VGILPARRAIA++L+ DLPYKLSPDD++LT+GC+
Sbjct: 58  FRTTPVAEDAIVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCS 117

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
           QAIE+I+ VLARPGANILLPRPG+P+YE+ A  +HLE RHFDLLP KGWEVDL+ V+ALA
Sbjct: 118 QAIELIIKVLARPGANILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKALA 177

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
           DENTVA+VIINPGNPCGN++T++HL+K+AETA+ LGI+VI+DEVY HLAFG  P+V MG 
Sbjct: 178 DENTVAMVIINPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVSMGA 237

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           FGSI PV+TLGSISKRWIVPGWRLGWLVT+DPNGIL  SG+V+SI S LNISSDPATFIQ
Sbjct: 238 FGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFIQ 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325516250|gb|ADZ24703.1| tyrosine aminotransferase 2 [Solanum pennellii]

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 214/300 (71%), Positives = 253/300 (84%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENG      +W FK NE+L + S +TVR VLN L+  ++  DTRP IPLGHGDPSAFP 
Sbjct: 1   MENGTTTGRRRWNFKENEKLVSVSDLTVRSVLNKLMCCVDPADTRPTIPLGHGDPSAFPC 60

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           FRT  +A DAI  +VRSA FN YSSTVGILPARRA+A+YL++DLPYKLSPDD+YLT GC 
Sbjct: 61  FRTTPIAEDAISDAVRSAMFNGYSSTVGILPARRAVAEYLSQDLPYKLSPDDIYLTSGCG 120

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
           QAIE++L  LARP ANILLP PGFPYYEA    + +E+RHF+LLP K WEVDL+AVE+LA
Sbjct: 121 QAIEILLNALARPNANILLPTPGFPYYEAWGGFTQMEMRHFNLLPEKEWEVDLNAVESLA 180

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
           DENTVA+VIINPGNPCGNVY+ +HL+K+AETA+KLGI+VI+DEVY HLAFG+ PFVPMG+
Sbjct: 181 DENTVAMVIINPGNPCGNVYSEEHLKKVAETARKLGILVISDEVYAHLAFGSKPFVPMGI 240

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           FGSI PV+TLGSISKRWIVPGWRLGWLVT+DPNGIL++ G +DSI  +LNIS+DPATFIQ
Sbjct: 241 FGSIAPVVTLGSISKRWIVPGWRLGWLVTNDPNGILKEHGDIDSIMGYLNISTDPATFIQ 300

Source: Solanum pennellii

Species: Solanum pennellii

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811786|emb|CAN63727.1| hypothetical protein VITISV_034866 [Vitis vinifera]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/293 (71%), Positives = 250/293 (85%)

Query: 8   NGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVA 67
            G    F+ NEEL  A+ IT+RGVLN ++ NLN  D RP+IPLGHGDPSAF  FRT   A
Sbjct: 3   EGRDGVFQGNEELDKAASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSCFRTTPXA 62

Query: 68  VDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127
            DAIV ++RS +FN Y+  VGILPARRAIA++L+ DLPYKLSPDD++LT+GC+QA+E+I+
Sbjct: 63  EDAIVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCSQALELII 122

Query: 128 TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187
            VLARPGANILLPRPG+P+YE+ A  +HLE RHFDLLP KGWEVDL+ V+ALADENTVA+
Sbjct: 123 KVLARPGANILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKALADENTVAM 182

Query: 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247
           VIINPGNPCGN++T++HL+K+AETA+ LGI+VI+DEVY HLAFG  P+VPMG FGSI PV
Sbjct: 183 VIINPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVPMGAFGSITPV 242

Query: 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           +TLGSISKRWIVPGWRLGWLVT+DPNGIL  SG+V+SI S LNISSDPATFIQ
Sbjct: 243 ITLGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFIQ 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133450|ref|XP_002328045.1| aminotransferase family protein [Populus trichocarpa] gi|222837454|gb|EEE75833.1| aminotransferase family protein [Populus trichocarpa]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 258/309 (83%), Gaps = 2/309 (0%)

Query: 11  QWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDA 70
           +W  + NE L   +  ++RG L  L ++L+K+D RP++PL HGDPSAF  FRT+  AVDA
Sbjct: 7   KWIIRGNELLDETAATSIRGYLIMLYDHLDKDDQRPVVPLSHGDPSAFACFRTSPEAVDA 66

Query: 71  IVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL 130
           IVH+V+SA FN Y+ T+GILPARRA+A+YL+ DLPY LS DD+YLT+GCTQ+IEVIL+ L
Sbjct: 67  IVHAVQSAEFNSYAPTIGILPARRAVAEYLSADLPYNLSADDIYLTVGCTQSIEVILSAL 126

Query: 131 ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII 190
           ARPGANILLPRPG+P YE+RA+ S LEVRHFDL+P KGWEVDL++VEALADENT A+VII
Sbjct: 127 ARPGANILLPRPGYPLYESRASFSKLEVRHFDLIPEKGWEVDLESVEALADENTAAIVII 186

Query: 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250
           +PGNPCGNV++YQHL+K+AETA+KLGI VIADEVY H+AFG+ P+VPMG FGSIVPVL+L
Sbjct: 187 SPGNPCGNVFSYQHLKKVAETARKLGIFVIADEVYGHIAFGSNPYVPMGEFGSIVPVLSL 246

Query: 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ--FLKSSRKL 308
           GSISKRWIVPGWRLGW+ T DPNGIL+  GIVDSIKS+ NISS+PATF+Q    +   K 
Sbjct: 247 GSISKRWIVPGWRLGWIATCDPNGILKKYGIVDSIKSYFNISSNPATFVQAAIPQIFEKT 306

Query: 309 KRNSFLKSL 317
           K + F K++
Sbjct: 307 KEDFFSKTI 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446435|ref|XP_002276464.1| PREDICTED: tyrosine aminotransferase isoform 1 [Vitis vinifera]

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/300 (70%), Positives = 247/300 (82%), Gaps = 3/300 (1%)

Query: 1   MENGGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPS 60
           MENG      +WGF+ N+ L  A+ ITVRGVL  ++ NLN  D RP+I LG GDPSAF  
Sbjct: 1   MENGAA---ERWGFRGNQVLDKAASITVRGVLRKVISNLNPQDRRPVITLGQGDPSAFSC 57

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           FRTA  A +AIV +VRS  F+ Y   VG+LPARRAIA+YL+ DLPYKLSPDDVYLT+GC 
Sbjct: 58  FRTAPEAEEAIVDAVRSREFDSYPPDVGVLPARRAIAEYLSTDLPYKLSPDDVYLTVGCG 117

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
           QAIE+I+ VLARPGANILLPRPG+ +YEA A  +HLE R FDLLP K WEVDL+ V+ALA
Sbjct: 118 QAIELIIKVLARPGANILLPRPGYAFYEALAAANHLEFRRFDLLPEKVWEVDLEGVKALA 177

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
           DENTVA+VIINPGNPCGNV+T+QHL+K+AETA+ LGI+VIADEVY HL FG+ PFVPMGV
Sbjct: 178 DENTVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPFVPMGV 237

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           FGSI PV+TLGSISKRWIVPGWRLGWLVT+DPNGIL  SGIV++I S+LNI +DP +FIQ
Sbjct: 238 FGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGIVETIVSYLNICADPTSFIQ 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
TAIR|locus:2158926	420	AT5G36160 [Arabidopsis thalian	0.924	0.702	0.614	7.9e-101
TAIR|locus:2154714	414	TAT7 "tyrosine aminotransferas	0.874	0.673	0.656	2.2e-98
TAIR|locus:2046056	462	SUR1 "SUPERROOT 1" [Arabidopsi	0.965	0.666	0.564	1.5e-97
TAIR|locus:2121407	449	AT4G28420 [Arabidopsis thalian	0.952	0.677	0.557	6.1e-94
UNIPROTKB|Q9ST03	551	naat-B "Nicotianamine aminotra	0.962	0.557	0.551	1.5e-92
UNIPROTKB|Q9ST02	461	naat-A "Nicotianamine aminotra	0.934	0.646	0.554	1e-91
TAIR|locus:2121382	447	AT4G28410 [Arabidopsis thalian	0.978	0.697	0.522	4.5e-91
TAIR|locus:2047441	445	TAT3 "tyrosine aminotransferas	0.921	0.660	0.525	1.6e-86
TAIR|locus:2128434	424	AT4G23590 [Arabidopsis thalian	0.884	0.665	0.463	7.2e-68
TAIR|locus:2128459	422	CORI3 "CORONATINE INDUCED 1" [	0.931	0.703	0.451	5.1e-67

TAIR|locus:2158926 AT5G36160 [Arabidopsis thaliana (taxid:3702)]

 Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
 Identities = 182/296 (61%), Positives = 237/296 (80%)

Query:     6 GANG-NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTA 64
             G NG  +W F ANE ++ ++ +T+R  LN+L+  L+  D RP+IPLGHGDPS FPSFRT 
Sbjct:     2 GENGAKRWNFGANEVVERSNSLTIRDYLNTLINCLDGGDVRPVIPLGHGDPSPFPSFRTD 61

Query:    65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124
               AV+AI  +VRS +FN YSS+ G+  AR+A+A+YL+ DL Y++SP+DV++T GC QAIE
Sbjct:    62 QAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIE 121

Query:   125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184
             ++++ LA PGANILLPRP +P Y++RA    LEVR+FDLLP  GW+VDLD VEALAD+ T
Sbjct:   122 ILISALAIPGANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKT 181

Query:   185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244
             VA+++INP NPCGNV++ QHLQKIAETA KLGI+VIADEVYDH AFG+ PFV M  F  +
Sbjct:   182 VAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAEL 241

Query:   245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
             VPV+ LG+ISKRW VPGWRLGW+VT DP+GI++DSG V ++ + +N+S+DPATFIQ
Sbjct:   242 VPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQ 297

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IGI

GO:0006572 "tyrosine catabolic process" evidence=IGI

TAIR|locus:2154714 TAT7 "tyrosine aminotransferase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
 Identities = 185/282 (65%), Positives = 226/282 (80%)

Query:    22 TASGITVRGVLNSLLENLNKNDT---RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA 78
             T S IT++G+L+ L+E++   +    + +I LG GDP+ +  FRT  V++ A+  S+ S 
Sbjct:     7 TTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQAVSDSLLSN 66

Query:    79 RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138
             +F+ YS TVG+  ARRAIA+YL+RDLPYKLS DDV++T GCTQAI+V L++LARP ANIL
Sbjct:    67 KFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSMLARPRANIL 126

Query:   139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN 198
             LPRPGFP YE  A   HLEVR+ DLLP  GWE+DLDAVEALADENTVALV+INPGNPCGN
Sbjct:   127 LPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVINPGNPCGN 186

Query:   199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258
             VY+YQHL KIAE+AKKLG +VIADEVY HLAFG+ PFVPMGVFGSIVPVLTLGS+SKRWI
Sbjct:   187 VYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRWI 246

Query:   259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
             VPGWRLGW VT+DP+G  +D  I++  K + +I   PATFIQ
Sbjct:   247 VPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQ 288

GO:0005737 "cytoplasm" evidence=ISM

GO:0008483 "transaminase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=ISS

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IGI;IMP;IDA;TAS

GO:0010189 "vitamin E biosynthetic process" evidence=IEP;IMP

TAIR|locus:2046056 SUR1 "SUPERROOT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
 Identities = 176/312 (56%), Positives = 231/312 (74%)

Query:     8 NGNQ--WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTAS 65
             NG    W F  +++   AS +T+RGV+  L +N  K+  + ++PLGHGDPS +P FRT  
Sbjct:    27 NGQSSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCI 86

Query:    66 VAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125
              A DA+V  +RS + N Y    GILPARRA+ADY+NRDLP+KL+P+D++LT GC Q IE+
Sbjct:    87 EAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEI 146

Query:   126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185
             +   LARP ANILLPRPGFP+Y+ARA +S LEVR FDLLP K WE+DL+ +EA+ADENTV
Sbjct:   147 VFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTV 206

Query:   186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
             A+V+INP NPCGNVY++ HL+K+AETA+KLGIMVI+DEVYD   FG+ PFV MG F SIV
Sbjct:   207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIV 266

Query:   246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSS 305
             PVLTL  ISK W+VPGW++GW+  +DP G+ + + ++ SIK  L+++ DPAT IQ    +
Sbjct:   267 PVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPA 326

Query:   306 --RKLKRNSFLK 315
                K  +N F K
Sbjct:   327 ILEKADKNFFAK 338

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;RCA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0016846 "carbon-sulfur lyase activity" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0080108 "S-alkylthiohydroximate lyase activity" evidence=IMP

GO:0001560 "regulation of cell growth by extracellular stimulus" evidence=IMP

GO:0048830 "adventitious root development" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=IMP;RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TAIR|locus:2121407 AT4G28420 [Arabidopsis thaliana (taxid:3702)]

 Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
 Identities = 174/312 (55%), Positives = 230/312 (73%)

Query:    12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
             W F+ ++    AS +T+R ++  L +  + +  +PL+PL HGDPS +P +RT+ +  +A+
Sbjct:    27 WRFRGSDNAAKASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENAV 86

Query:    72 VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
             V  +RS + N Y    GILPAR+A+ADY+NRDL  K+ P+DV++T+GC Q IEV+L  LA
Sbjct:    87 VDVLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLA 146

Query:   132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
             RP ANILLPRP +P+YEARA +S LEVR FDLLP K WE+DL  +EA+ADENTVA+VIIN
Sbjct:   147 RPNANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIIN 206

Query:   192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
             P NPCGNVY+Y HL+K+AETAKKLGIMVI DEVY    FG+ PFVPMG F SI PV+TLG
Sbjct:   207 PNNPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLG 266

Query:   252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFL------KSS 305
              ISK WIVPGWR+GW+  +DP GIL+ +G+V SI+  L+I+ D  T +Q        K++
Sbjct:   267 GISKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAALPEILGKAN 326

Query:   306 RKL--KRNSFLK 315
             ++L  K+NS LK
Sbjct:   327 KELFAKKNSMLK 338

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

UNIPROTKB|Q9ST03 naat-B "Nicotianamine aminotransferase B" [Hordeum vulgare (taxid:4513)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 172/312 (55%), Positives = 234/312 (75%)

Query:    11 QWGFK-ANEELKTASG--ITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVA 67
             +W F  A + +  A+G  +++R +   +  ++ +   RP++PL HGDPS FP+FRTA  A
Sbjct:   131 EWNFAGAKDGVLAATGANMSIRAIRYKISASVQEKGPRPVLPLAHGDPSVFPAFRTAVEA 190

Query:    68 VDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127
              DA+  +VR+ +FNCY + VG+  AR A+A++L++ +PY LS DDV+LT G TQAIEVI+
Sbjct:   191 EDAVAAAVRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVII 250

Query:   128 TVLARP-GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186
              VLA+  GANILLPRPG+P YEARA  + LEVRHFDL+P KGWE+D+D++E++AD+NT A
Sbjct:   251 PVLAQTAGANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTA 310

Query:   187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246
             +VIINP NPCG+VY+Y HL K+AE AK+LGI+VIADEVY  L  G+ PF+PMGVFG I P
Sbjct:   311 MVIINPNNPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITP 370

Query:   247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQF-LKSS 305
             VL++GS+SK WIVPGWRLGW+   DP  ILQ++ I  SI ++LN+S+DPATFIQ  L   
Sbjct:   371 VLSIGSLSKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQI 430

Query:   306 RKLKRNSFLKSL 317
              +  +  F K++
Sbjct:   431 LENTKEDFFKAI 442

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

UNIPROTKB|Q9ST02 naat-A "Nicotianamine aminotransferase A" [Hordeum vulgare (taxid:4513)]

 Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
 Identities = 168/303 (55%), Positives = 230/303 (75%)

Query:     3 NG-GGANGNQWGF-KANEELKTASGI--TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAF 58
             NG   A   +W F +  + +   +G   ++R +   +  ++ ++  RP++PL HGDPS F
Sbjct:    32 NGHAAAAAVEWNFARGKDGILATTGAKNSIRAIRYKISASVEESGPRPVLPLAHGDPSVF 91

Query:    59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
             P+FRTA  A DA+  ++R+ +FNCY++ VG+  AR A+A++L++ +PYKLS DDV+LT G
Sbjct:    92 PAFRTAVEAEDAVAAALRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAG 151

Query:   119 CTQAIEVILTVLARP-GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
              TQAIEVI+ VLA+  GANILLPRPG+P YEARA  + LEVRHFDL+P KGWE+D+D++E
Sbjct:   152 GTQAIEVIIPVLAQTAGANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLE 211

Query:   178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237
             ++AD+NT A+VIINP NPCG+VY+Y HL K+AE A+KLGI+VIADEVY  L  G+ PF+P
Sbjct:   212 SIADKNTTAMVIINPNNPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAPFIP 271

Query:   238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPAT 297
             MGVFG I PVL++GS+SK WIVPGWRLGW+   DP  IL+ + I  SI ++LN+S+DPAT
Sbjct:   272 MGVFGHIAPVLSIGSLSKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTDPAT 331

Query:   298 FIQ 300
             F+Q
Sbjct:   332 FVQ 334

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

TAIR|locus:2121382 AT4G28410 [Arabidopsis thaliana (taxid:3702)]

 Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
 Identities = 164/314 (52%), Positives = 229/314 (72%)

Query:     5 GGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTA 64
             GG  G+ W FK N+  K A+ ++++G L  L +  +K+  + ++PLGHGDPS +P F+T+
Sbjct:    28 GGIGGSVWRFKGNKAAKEAASVSMKGTLARLFDCCSKDVKKTILPLGHGDPSVYPCFQTS 87

Query:    65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124
               A +A+V S+RS   N Y+  VGILPARRA+A+YLNRDLP+K+  DD+++T+GC Q IE
Sbjct:    88 VDAEEAVVESLRSGAANSYAPGVGILPARRAVANYLNRDLPHKIHSDDIFMTVGCCQGIE 147

Query:   125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184
              ++  LA P ANILLP   +P Y + A HS +E+R ++LLP   WE+DL  VEA+ADENT
Sbjct:   148 TMIHALAGPKANILLPTLIYPLYNSHAIHSLVEIRKYNLLPDLDWEIDLQGVEAMADENT 207

Query:   185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244
             +A+VI+NP NPCGNVYTY+HL+K+AE A+KLGIMVI+DEVY+   +G   FVPMG+F SI
Sbjct:   208 IAVVIMNPHNPCGNVYTYEHLKKVAEVARKLGIMVISDEVYNQTIYGENKFVPMGIFSSI 267

Query:   245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304
              PV+TLGSISK W+VPGWR+GW+  +DP  + + + +V+SIK  L+IS DP+T +QF   
Sbjct:   268 TPVVTLGSISKGWLVPGWRIGWIAMNDPKNVFKTTRVVESIKEHLDISPDPSTILQFALP 327

Query:   305 S--RKLKRNSFLKS 316
             +   K K+  F K+
Sbjct:   328 NILEKTKKEFFEKN 341

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2047441 TAT3 "tyrosine aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
 Identities = 155/295 (52%), Positives = 212/295 (71%)

Query:     7 ANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASV 66
             AN N W FK N     A+ +T+R +   + +N   N  + ++    G+PSA  +FRT   
Sbjct:    11 ANANVWRFKGNGATSDAAAVTLRKLAFGMFKNCTMNSGKTILFPTPGEPSAHSNFRTCPE 70

Query:    67 AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126
             A +A+  + RS   N Y+ + G+  ARRA+A+YLN +LP KL  +DVY+T GC QAIE++
Sbjct:    71 AEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEIV 130

Query:   127 LTVLA-RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185
             +  LA  P ANILLPRPG+P+Y+ARA +S LE+R +DLLP   WE++LD +EA ADENTV
Sbjct:   131 IDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENTV 190

Query:   186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
             A+VIINP NPCGNVYTY HL K+AE A+KLGIM+I+DEVYDH+ +G+ PF+PMG F SI 
Sbjct:   191 AMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASIA 250

Query:   246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
             PV+TLGSISK W+ PGWR+GW+  +DPNGI   +G+V +I+ FL+++  P+  +Q
Sbjct:   251 PVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSFILQ 305

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=ISS

TAIR|locus:2128434 AT4G23590 [Arabidopsis thaliana (taxid:3702)]

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 134/289 (46%), Positives = 195/289 (67%)

Query:    12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
             W F  ++  + A+  ++ G  +S + +L     +P++P     P +  +  T+  A  A+
Sbjct:     9 WQFSGSDAAEKAAQASL-GTYSSEIFSLCDPQGKPILP-----PLSEEA-ETSHTAEKAV 61

Query:    72 VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
             V +V     N Y+ ++G+  A+RA+A+YLNRDL  KL+ DDVY+T+GC QAIE+ +++LA
Sbjct:    62 VKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQAIELAVSILA 121

Query:   132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
             +P ANILLPRPGFP+    + + HLEVR ++ +P + +E+D ++V  + DENT A+ IIN
Sbjct:   122 KPKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVDENTFAIFIIN 181

Query:   192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
             P NP GN YT  HL+++A  A++LGIMV++DEVY    FG+ PFVPMG F SIVPV+TLG
Sbjct:   182 PHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKFSSIVPVITLG 241

Query:   252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
             SISK WIVPGWR GWL   D NG+ + + ++ + K FL I+S P T IQ
Sbjct:   242 SISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQ 290

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2128459 CORI3 "CORONATINE INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 141/312 (45%), Positives = 203/312 (65%)

Query:    12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
             W F  +E  K A+  ++ G   S L  L     +P++P     P       T++ A  A+
Sbjct:     9 WQFSGSEAAKDAAAASL-GSYTSALYALCDPHGKPILP-----PRN-EILETSNTAEKAV 61

Query:    72 VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
             V +V     N Y+ ++G+  A+ A+A+YLN+ LP KL+ DDV++TLGC QAIE+ + +LA
Sbjct:    62 VKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVFMTLGCKQAIELAVDILA 121

Query:   132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
             +P AN+LLP PGFP+   R+ + +LEVRH++ LP K +E+D D+V AL DENT A+ IIN
Sbjct:   122 KPKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFDSVRALVDENTFAIFIIN 181

Query:   192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
             P NP GN Y+  HL+++AE AK+L IMV++DEV+    FG+ PFVPMG F SIVPV+TLG
Sbjct:   182 PHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNPFVPMGKFSSIVPVVTLG 241

Query:   252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFL------KSS 305
             SISK W VPGWR GWL   D +G+ +++ ++ + + FL I+++P T IQ        K+ 
Sbjct:   242 SISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNNPPTVIQAAIPDILEKTP 301

Query:   306 RKL--KRNSFLK 315
             ++   KR SFLK
Sbjct:   302 QEFFDKRQSFLK 313

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IEP

GO:0008483 "transaminase activity" evidence=IEA;ISS;NAS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0010188 "response to microbial phytotoxin" evidence=IEP

GO:0004021 "L-alanine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004121 "cystathionine beta-lyase activity" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=TAS

GO:0050362 "L-tryptophan:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LVY1	TAT_ARATH	2, ., 6, ., 1, ., 5	0.6148	0.9247	0.7023	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AMT1	aminotransferase family protein (418 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pm.C_LG_II000277	4-hydroxyphenylpyruvate dioxygenase (EC-1.13.11.27) (444 aa)						•			0.910
	eugene3.00051120	4-hydroxyphenylpyruvate dioxygenase (343 aa)						•			0.903
	gw1.XII.71.1	hypothetical protein (321 aa)						•			0.899
	gw1.X.450.1	hypothetical protein (323 aa)						•			0.899
	gw1.VIII.466.1	hypothetical protein (305 aa)						•			0.899
	gw1.VII.698.1	hypothetical protein (302 aa)						•			0.899
	gw1.IV.2899.1	hypothetical protein (306 aa)						•			0.899
	gw1.III.1437.1	hypothetical protein (291 aa)						•			0.899
	gw1.II.2473.1	hypothetical protein (303 aa)						•			0.899
	gw1.28.655.1	annotation not avaliable (78 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	319
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	0.0
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	1e-155
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	1e-155
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	1e-153
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-135
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	1e-81
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	5e-59
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	4e-58
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	2e-50
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	2e-38
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	5e-38
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	8e-37
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	8e-34
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	1e-29
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	1e-29
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	1e-27
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	1e-27
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	2e-26
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	4e-26
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	7e-26
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	5e-25
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	6e-25
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	7e-25
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	9e-23
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	4e-22
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	2e-20
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	4e-20
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	1e-19
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	8e-19
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	1e-18
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	2e-18
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	4e-18
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	5e-18
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	1e-17
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	2e-17
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	6e-17
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	1e-16
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	2e-16
PLN02231	534	PLN02231, PLN02231, alanine transaminase	2e-16
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	3e-16
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	3e-16
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	3e-16
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	2e-15
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	6e-15
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	1e-14
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	3e-14
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	5e-14
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	6e-14
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	1e-13
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	2e-13
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	5e-13
PLN02368	407	PLN02368, PLN02368, alanine transaminase	7e-13
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	8e-13
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	8e-13
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	9e-13
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	2e-12
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	5e-12
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	6e-12
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	1e-11
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	2e-11
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	2e-11
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	3e-11
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	1e-10
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	1e-10
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	2e-10
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	9e-10
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	3e-09
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	4e-09
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	4e-09
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	1e-08
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	1e-08
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	2e-08
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	4e-08
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	5e-08
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	9e-08
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	1e-07
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	2e-07
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	4e-07
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	6e-07
pfam01053	382	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP	7e-07
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	2e-06
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	3e-06
pfam01212	288	pfam01212, Beta_elim_lyase, Beta-eliminating lyase	3e-06
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	5e-06
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	5e-06
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	6e-06
PRK07392	360	PRK07392, PRK07392, threonine-phosphate decarboxyl	8e-06
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	5e-05
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	5e-05
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	6e-05
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	6e-05
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	7e-05
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	9e-05
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	1e-04
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	1e-04
cd06453	373	cd06453, SufS_like, Cysteine desulfurase (SufS)-li	6e-04
cd00610	413	cd00610, OAT_like, Acetyl ornithine aminotransfera	7e-04
COG2873	426	COG2873, MET17, O-acetylhomoserine sulfhydrylase [	0.001
PLN02994	153	PLN02994, PLN02994, 1-aminocyclopropane-1-carboxyl	0.001
COG4992	404	COG4992, ArgD, Ornithine/acetylornithine aminotran	0.001
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	0.001
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	0.002
PRK06084	425	PRK06084, PRK06084, O-acetylhomoserine aminocarbox	0.002
COG2008	342	COG2008, GLY1, Threonine aldolase [Amino acid tran	0.004

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  517 bits (1332), Expect = 0.0
 Identities = 204/307 (66%), Positives = 251/307 (81%), Gaps = 7/307 (2%)

Query: 1   MENGGGANGN-----QWGFKANE-ELKTASGITVRGVLNSLLENLNKNDT-RPLIPLGHG 53
           ME GGG  G      +W F+     L  A  +++R VLN +   ++     RP++PLGHG
Sbjct: 1   MEGGGGGGGGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHG 60

Query: 54  DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDV 113
           DPSAFP FRTA  A DA+  ++RS ++N YS+ VG+LPARRAIA+YL+RDLPY+LS DD+
Sbjct: 61  DPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDI 120

Query: 114 YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
           YLT GC QAIE+I++VLA+PGANILLPRPG+P YEARA  S LEVRHFDLLP +GWEVDL
Sbjct: 121 YLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDL 180

Query: 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT 233
           + VEALADENTVA+VIINP NPCG+VY+Y+HL KIAETA+KLGI+VIADEVYDHL FG+ 
Sbjct: 181 EGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK 240

Query: 234 PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS 293
           PFVPMGVFG + PVLTLGSISKRW+VPGWRLGW+ T DPNGIL+++ +VDSI+++LNIS+
Sbjct: 241 PFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNIST 300

Query: 294 DPATFIQ 300
           DPATF+Q
Sbjct: 301 DPATFVQ 307

Length = 430

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score =  441 bits (1135), Expect = e-155
 Identities = 156/289 (53%), Positives = 209/289 (72%), Gaps = 4/289 (1%)

Query: 12  WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
           W FK ++         +R ++++L    N    +P+IPL HGDPS F + RT   A +A+
Sbjct: 1   WNFKGSDHSNKTVN-PIRAIVDNLKVKPNPE--KPVIPLSHGDPSVFGNLRTDPEAEEAV 57

Query: 72  VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
             ++RS +FN Y+ +VG L AR A+A+YL+ DLP KL+ DDV LT GC+QAIE+ +  LA
Sbjct: 58  KDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALA 117

Query: 132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
            PGANIL+PRPGFP Y+ RA  S LEVR +DLLP K WE+DLD +E+LADE TVA+V+IN
Sbjct: 118 NPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLESLADEKTVAIVVIN 177

Query: 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
           P NPCG+V++  HLQKIAE A+KLGI +IADE+Y H+ FG+ PF+PM  F SIVPVL+LG
Sbjct: 178 PSNPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLG 237

Query: 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
            ISKRW+VPGWRLGW++  DP+GI +D+ ++  +K+ L     PAT +Q
Sbjct: 238 GISKRWVVPGWRLGWIIIHDPHGIFRDT-VLQGLKNLLQRILGPATIVQ 285

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score =  440 bits (1134), Expect = e-155
 Identities = 190/280 (67%), Positives = 233/280 (83%), Gaps = 1/280 (0%)

Query: 22  TASGITVRGVLNSLLENL-NKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF 80
           T   IT++G+L+ L+E++ ++ + + +I LG GDP+A+  F T  VA +A+V +++S +F
Sbjct: 7   TTKTITIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKF 66

Query: 81  NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140
           N Y+ TVG+  ARRAIA+YL+RDLPYKLS DDV++T GCTQAI+V L++LARPGANILLP
Sbjct: 67  NGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLP 126

Query: 141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
           RPGFP YE  A   HLEVR+ DLLP KGWEVDLDAVEALAD+NTVALVIINPGNPCGNVY
Sbjct: 127 RPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVY 186

Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260
           +YQHL+KIAETA+KL I+VIADEVY HLAFG+ PFVPMGVFGSIVPVLTLGS+SKRWIVP
Sbjct: 187 SYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVP 246

Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           GWRLGW VT+DP+G  +D  IV+ IK + +I   PATFIQ
Sbjct: 247 GWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQ 286

Length = 409

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  435 bits (1120), Expect = e-153
 Identities = 192/282 (68%), Positives = 224/282 (79%), Gaps = 1/282 (0%)

Query: 20  LKTAS-GITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA 78
           LKT     ++   +  L EN N++D R  I  G GDPS F  FRT ++A DAIV +VRSA
Sbjct: 6   LKTEPPSYSIDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSA 65

Query: 79  RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138
           +FN Y+ T GILPARRAIADYL+ DLPY+LSPDDVYLTLGC  A E+I+ VLARP ANIL
Sbjct: 66  KFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANIL 125

Query: 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN 198
           LPRPGFP  E  A   HLE+RHFDLLP KGWEVDLDAVEA+ADENT+A+VIINPGNPCG+
Sbjct: 126 LPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGS 185

Query: 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258
           VY+Y+HL KIAETA+KLGI+VIADEVY H+ FG+ PFVPMG+F SIVPV+TLGSISKRW+
Sbjct: 186 VYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWM 245

Query: 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           +PGW LGWLVT DP+G+LQ   I DSIK  LN +  P TFIQ
Sbjct: 246 IPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQ 287

Length = 409

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score =  391 bits (1005), Expect = e-135
 Identities = 170/289 (58%), Positives = 223/289 (77%)

Query: 12  WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI 71
           W F  +++   AS +T+RGV+  L +N  K+  + ++PLGHGDPS +P FRT   A DA+
Sbjct: 33  WRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAV 92

Query: 72  VHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131
           V  +RS + N Y    GILPARRA+ADY+NRDLP+KL+P+D++LT GC Q IE++   LA
Sbjct: 93  VDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLA 152

Query: 132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191
           RP ANILLPRPGFP+Y+ARA +S LEVR FDLLP K WE+DL+ +EA+ADENTVA+V+IN
Sbjct: 153 RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVIN 212

Query: 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251
           P NPCGNVY++ HL+K+AETA+KLGIMVI+DEVYD   FG+ PFV MG F SIVPVLTL 
Sbjct: 213 PNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLA 272

Query: 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
            ISK W+VPGW++GW+  +DP G+ + + ++ SIK  L+++ DPAT IQ
Sbjct: 273 GISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQ 321

Length = 462

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score =  252 bits (646), Expect = 1e-81
 Identities = 111/259 (42%), Positives = 157/259 (60%), Gaps = 3/259 (1%)

Query: 42  NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLN 101
           N  +P+I L  GDP+ F +  T    + A+  S+ S ++N Y+ TVG L AR AIA Y  
Sbjct: 28  NPEKPVIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYY- 86

Query: 102 RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHF 161
            +    +  DDV L  GC+ AIE+ +  LA  G NIL+PRPGFP Y   A    +EV+ +
Sbjct: 87  HNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLAESMGIEVKLY 146

Query: 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221
           +LLP K WE+DL  +E+L DE T ALV+ NP NPCG+V++ QHL++I   A++  + +IA
Sbjct: 147 NLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIA 206

Query: 222 DEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281
           DE+Y  + F    F P+    S VP+L+ G ++KRW+VPGWRLGW++  D  GIL+D  I
Sbjct: 207 DEIYGDMVFSGATFEPVASLSSNVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRD--I 264

Query: 282 VDSIKSFLNISSDPATFIQ 300
            D +         P T +Q
Sbjct: 265 RDGLVKLSQRILGPCTIVQ 283

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  192 bits (490), Expect = 5e-59
 Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 4/225 (1%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           I L  G+P     F      ++A+  +   A    Y    G+   R AIA++L R     
Sbjct: 1   IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVD 56

Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167
           + P+++ +T G  +A+ ++L  L  PG  +L+P P +P YEA A  +  EV    L    
Sbjct: 57  VPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEG 116

Query: 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
           G+ +DL+ +EA     T  L + NP NP G V + + L+++AE AKK GI++I+DE Y  
Sbjct: 117 GFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE 176

Query: 228 LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           L +   P   + +  +   V+ L S SK + +PG R+G+L+    
Sbjct: 177 LVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE 221

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score =  191 bits (488), Expect = 4e-58
 Identities = 90/250 (36%), Positives = 138/250 (55%), Gaps = 7/250 (2%)

Query: 32  LNSLLENLNKN-DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
           L ++ +N   +   + +I L  GDP+   +  T ++   A+V +V S   N Y  TVG  
Sbjct: 19  LRTVTDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSP 78

Query: 91  PARRAIADYLNRDLPYK------LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF 144
            AR A+A Y      +K      +  D+V L  G + AI + LT L   G NIL+P PGF
Sbjct: 79  EAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGF 138

Query: 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204
           P+YE       +E+R ++  P K WE DLD +  L D+ T AL++ NP NPCG+ ++ +H
Sbjct: 139 PHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKH 198

Query: 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264
           ++ I    ++L + +I+DE+Y  + F    F  +  F + VP + LG  +K  +VPGWRL
Sbjct: 199 VEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRL 258

Query: 265 GWLVTSDPNG 274
           GWL+  DP+G
Sbjct: 259 GWLLLVDPHG 268

Length = 412

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  171 bits (436), Expect = 2e-50
 Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 14/260 (5%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
             +I L  G+P     F T    ++A + ++     + Y+ + GI   R AIA+   R  
Sbjct: 28  EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGTH-YTPSAGIPELREAIAEKYKRRY 82

Query: 105 PYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163
              + P+ ++ +T G  +A+ +    L  PG  +L+P PG+P YEA    +  +     L
Sbjct: 83  GLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPL 142

Query: 164 L-PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222
                G++ DL+ +EA     T A+++ +P NP G VY+ + L+ I E A++  I++I+D
Sbjct: 143 DEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISD 202

Query: 223 EVYDHLAFGNTPFVPMG-VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281
           E+Y+ L +       +  + G+    +T+ S SK + + GWR+GW+V      ++     
Sbjct: 203 EIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE-ELIAA--- 258

Query: 282 VDSIKSFLNISSDPATFIQF 301
           +  +KS+L       T  Q+
Sbjct: 259 LRKLKSYLTSC--APTPAQY 276

Length = 393

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  139 bits (354), Expect = 2e-38
 Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 30/266 (11%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           R +I LG G+P     F T     +A + ++       Y+   GI   R AIA  L RD 
Sbjct: 31  RDVISLGAGEPD----FDTPEHIKEAAIEALD-DGKTKYTPAAGIPELREAIAAKLKRDN 85

Query: 105 PYKLSPDDVYLTLGCTQAI-EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163
                P  V +T G  QA+    + +L  PG  +++P P +  Y      +         
Sbjct: 86  GLDYDPSQVIVTTGAKQALYNAFMALL-DPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPT 144

Query: 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
               G+++ ++ +EA     T AL++ +P NP G VY+ + L+ IA+ A +  I V++DE
Sbjct: 145 GEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDE 204

Query: 224 VYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278
           +Y+ L +    F  +    S+ P      +T+   SK + + GWRLG+            
Sbjct: 205 IYEKLVYDGAEFTSI---ASLSPELRDRTITVNGFSKAYAMTGWRLGYAA---------- 251

Query: 279 SGIVDSIKSFLNI----SSDPATFIQ 300
            G  + IK+   +    +S+P +  Q
Sbjct: 252 -GPKELIKAMSKLQSHSTSNPTSIAQ 276

Length = 393

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  138 bits (350), Expect = 5e-38
 Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 5/255 (1%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           +I L  GDP  F  F+      +A   +++    N Y  + G+   R AI     R    
Sbjct: 32  VIRLNIGDPVKF-DFQPPEHMKEAYCRAIKEGH-NYYGPSEGLPELREAIVKREKRKNGV 89

Query: 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
            ++PDDV +T   T+A+++I   L  PG  IL+P P +P Y             +  +  
Sbjct: 90  DITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEE 149

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
           +GW+ D+D +     E T A+ +INP NP G +Y  + L++I + A +  + VI+DE+YD
Sbjct: 150 EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD 209

Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286
            + +     V  G     VPV+ +  +SK +   GWRLG++   DP G L +  + ++I 
Sbjct: 210 LMTY-EGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAE--VREAID 266

Query: 287 SFLNISSDPATFIQF 301
               I   P T  QF
Sbjct: 267 KLARIRLCPNTPAQF 281

Length = 398

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  134 bits (340), Expect = 8e-37
 Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 24/280 (8%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
              I LG  +        T      A   ++     N Y  T G+   R A+A +L R  
Sbjct: 1   TDKINLGSNEYLGDSG--TLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSP 58

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFD 162
             KL  +   +      A    L  L R  PG  IL+P P +P Y      +  EV  + 
Sbjct: 59  VLKLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYP 118

Query: 163 LLPAKGWEVDLDAVEALADENTVALVII---NPGNPCGNVYTYQHLQKIAETAKKLGIMV 219
           L  +  + +D DA+EA   E T    ++   +P NP G V T + L+K+ + AK+  I++
Sbjct: 119 LYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILL 178

Query: 220 IADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278
           + DE Y    FG+   V      +    +L +GS SK + + GWR+G+++ +    ++  
Sbjct: 179 LVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAA--VIS- 235

Query: 279 SGIVDSIKSFLNISS-----------DPATFIQFLKSSRK 307
              +  +      S+           DP      L+  R+
Sbjct: 236 --QLRKLARPFYSSTHLQAAAAAALSDPLLVASELEEMRQ 273

Length = 357

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score =  127 bits (322), Expect = 8e-34
 Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 3/226 (1%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           ++ L  G+P+ F  F      +  ++ ++ +A+   YS + G+  AR+AI  Y  +    
Sbjct: 35  ILKLNIGNPAPF-GFEAPDEILRDVIRNLPTAQ--GYSDSKGLFSARKAIMQYYQQKGIP 91

Query: 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
            +  DD+Y+  G ++ I + +  L   G  +L+P P +P + A  + S  +  H+     
Sbjct: 92  DVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEE 151

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
            GW  DLD + +     T A+VIINP NP G VY+ + L++I E A++  +++ ADE+YD
Sbjct: 152 AGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYD 211

Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
            + +     + +      +  +T   +SK + V G+R+GW+V S P
Sbjct: 212 KILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGP 257

Length = 404

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score =  117 bits (295), Expect = 1e-29
 Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 8/162 (4%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-PGANILLPR 141
           Y+ + G    R+A+A ++ R       P D++LT G +  I+++L +L   P   +++P 
Sbjct: 111 YTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPI 170

Query: 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNP 195
           P +P Y A  T    +   + L   KGW +D + +E   ++         ALV+INPGNP
Sbjct: 171 PQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230

Query: 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPFV 236
            G V T   +++I +   + GI+++ADEVY +++  G  PF+
Sbjct: 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFI 272

Length = 481

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score =  117 bits (295), Expect = 1e-29
 Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 10/246 (4%)

Query: 28  VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC--YSS 85
           VRG +      +    T  ++ L  G+P+ F  FRT     D +V+ +     +   YS 
Sbjct: 130 VRGPVVDEANRMEAAGTH-ILKLNIGNPAPF-GFRTP----DEVVYDMAQQLTDTEGYSD 183

Query: 86  TVGILPARRAIADYLN-RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF 144
           + G+  AR+AI  Y   + LP  +  DD+Y   G ++ I + ++ L   G  +L+P P +
Sbjct: 184 SKGLFSARKAIMQYAQLKGLP-NVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDY 242

Query: 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204
           P + A    +     H+       W  D+D + +     T A+VIINP NP G +Y  + 
Sbjct: 243 PLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREV 302

Query: 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264
           LQ+I + A++  +++ +DE+YD L         +      +  +T   +SK  ++ G+R+
Sbjct: 303 LQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRI 362

Query: 265 GWLVTS 270
           GW++ S
Sbjct: 363 GWMILS 368

Length = 517

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  110 bits (278), Expect = 1e-27
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 23/222 (10%)

Query: 59  PSFRTASVAVDAIVHSVRSARFNC--YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116
           P  +T  V  +AI    ++       YS + GI   R A A Y  +     + PD++ +T
Sbjct: 40  PDIKTPEVFFEAI----KNYDEEVLAYSHSQGIPELREAFAKYYKK-WGIDVEPDEILIT 94

Query: 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVR--------HFDLLPAKG 168
            G ++AI   +  +  PG  IL+P P +  Y   AT + +++          F L P+K 
Sbjct: 95  NGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHL-PSK- 152

Query: 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL 228
                + +E L    T A++I NPGNP G VYT + L+ +AE AKK  + +I+DEVY   
Sbjct: 153 -----EEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREF 207

Query: 229 AFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVT 269
            +    +        +   V+ + S+SKR+   G R+G L++
Sbjct: 208 VYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLIS 249

Length = 397

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  110 bits (277), Expect = 1e-27
 Identities = 71/235 (30%), Positives = 104/235 (44%), Gaps = 21/235 (8%)

Query: 44  TRP-LIPL--GHGD-PSAFPSF-RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98
            R  ++PL  G  D P+  P F R A  A  A+        F  Y+  +GI   R A+A 
Sbjct: 22  GREGVLPLWFGESDLPT--PDFIRDA--AAAALA---DGETF--YTHNLGIPELREALAR 72

Query: 99  YLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEV 158
           Y++R       P+ + +T    QA+ +    L  PG  ++   P +P   A        V
Sbjct: 73  YVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARV 132

Query: 159 RHFDLLP-AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217
               L     GW +DLD + A     T AL I +P NP G   +   L+ I    ++ G+
Sbjct: 133 VCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGL 192

Query: 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVP----VLTLGSISKRWIVPGWRLGWLV 268
            ++ADEVY+ L +      P   F  I      ++ + S SK W + GWRLGWLV
Sbjct: 193 WIVADEVYERLYYAPGGRAPS--FLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLV 245

Length = 382

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score =  107 bits (270), Expect = 2e-26
 Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 15/254 (5%)

Query: 22  TASGITVRGVLNSLLENLNKNDTRPLIPLGHG--DPSAFP--SFRTASVAVDAIVHSVRS 77
             SG  VR  L    +     D   +I    G  DPS FP  + R A   V     +  +
Sbjct: 66  PPSGRPVRLELLKPSDPELLEDDPSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLA 125

Query: 78  ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANI 137
            +   Y  T G+   R AIA YL         P+ + +T G  QA++++L +L  PG  +
Sbjct: 126 LQ---YGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTV 182

Query: 138 LLPRPGFPYYEARATHSHLEVRHFDL-LPAKGWEVDLDAVEALADENTVALVIINP--GN 194
           L+  P   Y  A      L  R   + +   G   D +A+E    +     V + P   N
Sbjct: 183 LVEDPT--YPGALQALEALGARVIPVPVDEDGI--DPEALEEALAQWKPKAVYVTPTFQN 238

Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254
           P G   + +  + +   A+K  +++I D+ Y  L +   P  P+    +   V+ LGS S
Sbjct: 239 PTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFS 298

Query: 255 KRWIVPGWRLGWLV 268
           K  + PG RLG++V
Sbjct: 299 KT-LAPGLRLGYVV 311

Length = 459

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score =  106 bits (266), Expect = 4e-26
 Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 12/195 (6%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+ + G +     I  Y +++       +++  T+G    + + L  +  PG  +++  P
Sbjct: 62  YTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEP 121

Query: 143 GF-PYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197
            F PY +           LE    D     G+++++  +EAL    T A+++ +P NP G
Sbjct: 122 YFTPYKDQIEMVGGKPIILETYEED-----GFQINVKKLEALITSKTKAIILNSPNNPTG 176

Query: 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKR 256
            V++ + L++IA+ A +  + +I+DEVYD  +F    FVPM     +    +T GS SK 
Sbjct: 177 AVFSKETLEEIAKIAIEYDLFIISDEVYDGFSF-YEDFVPMATLAGMPERTITFGSFSKD 235

Query: 257 WIVPGWRLGWLVTSD 271
           + + GWR+G+++  D
Sbjct: 236 FAMTGWRIGYVIAPD 250

Length = 384

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score =  105 bits (264), Expect = 7e-26
 Identities = 70/204 (34%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 66  VAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIE 124
            A +AI   V     N Y    GI   R AIA    R    +  PD +V +T+G T+AI 
Sbjct: 45  AAQEAIAGGV-----NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIA 99

Query: 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALADEN 183
             +  L  PG  +LL  P +  Y A    +        L+P  +G+ +DLDA+ A     
Sbjct: 100 AAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPR 159

Query: 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-G 242
           T AL++ +P NP G V T   L  IAE A +  ++VI DEVY+HL F     +P+    G
Sbjct: 160 TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG 219

Query: 243 SIVPVLTLGSISKRWIVPGWRLGW 266
                +T+ S +K + V GW++GW
Sbjct: 220 MRERTVTISSAAKTFNVTGWKIGW 243

Length = 387

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score =  103 bits (260), Expect = 5e-25
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 18/195 (9%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y  T G+L  R  +A+  N+    +++PDD+    G   AI  I  +L R  A ++ P P
Sbjct: 69  YCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLL-RREARVIGPSP 127

Query: 143 GFPYYEARATHSHLEVRH-------FDLLPAKGWEVDLDAVEALADEN--TVALVIINPG 193
                 A +THS  E  H       + L P   W  DLD +E     N     +++INP 
Sbjct: 128 ------AYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPD 181

Query: 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG-VFGSIVPVLTLGS 252
           NP G VY  + L++I + A++  + +I DE+Y+++ +     VP+  V G  VP + L  
Sbjct: 182 NPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD-VPGIALKG 240

Query: 253 ISKRWIVPGWRLGWL 267
           ISK    PG R GW+
Sbjct: 241 ISKELPWPGSRCGWI 255

Length = 433

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score =  103 bits (258), Expect = 6e-25
 Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 15/226 (6%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           I LG G    FP+F       +A + ++R  + N Y+   G+     AIA+   +D    
Sbjct: 57  INLGQG----FPNFDGPDFVKEAAIQAIRDGK-NQYARGFGVPELNSAIAERFKKDTGLV 111

Query: 108 LSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
           + P+ +V +T GCT+AI   +  L  PG  ++L  P +  YEA  + +  +++   L P 
Sbjct: 112 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP 171

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
             + V  D ++A     T A++I  P NP G ++T + L+ IA   K+  ++   DEVYD
Sbjct: 172 D-FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD 230

Query: 227 HLAFGNTPFVPM----GVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            LAF     + M    G++   V   T+ S+ K + + GW++GW +
Sbjct: 231 KLAF-EGDHISMASLPGMYERTV---TMNSLGKTFSLTGWKIGWAI 272

Length = 413

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  102 bits (257), Expect = 7e-25
 Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 26/231 (11%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           +I LG G+P     F T     +A + S+    +  Y++  G+L  R+ IA YL +    
Sbjct: 22  VISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAV 76

Query: 107 KLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT---------HSHL 156
              P+D + +T+G +QA++V +  +  PG  +L+  P F  Y    T          + L
Sbjct: 77  SYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTL 136

Query: 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
           E   F + PA+        +EA     T A+++ +P NP G V     L++IA   +K  
Sbjct: 137 E-NEFKVQPAQ--------IEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHD 187

Query: 217 IMVIADEVYDHLAFGNTPFVPMG-VFGSIVPVLTLGSISKRWIVPGWRLGW 266
           ++V++DE+Y  L + +  +     + G     + +   SK + + GWRLG+
Sbjct: 188 LIVLSDEIYAELTY-DEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237

Length = 378

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score = 97.1 bits (242), Expect = 9e-23
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 27/223 (12%)

Query: 59  PSFRT----ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD-V 113
           P F T       A  AI      A  + Y+   G+L  R+A AD++        +P++ +
Sbjct: 40  PDFTTPDHVKEAAKRAI-----DANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEI 94

Query: 114 YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEV-------RHFDLLPA 166
            +T+G T+A+   LT +  PG  +LLP P +P YE        E+         F L P 
Sbjct: 95  LVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPE 154

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
                 L+       +   A+++  P NP G  Y+ + ++ +A+  KK  I VI+DEVY 
Sbjct: 155 M-----LEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYS 209

Query: 227 HLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWL 267
            L +   P V +  +   +P   + +  +SK   + GWR+G +
Sbjct: 210 ELTYTGEPHVSIAEY---LPDQTILINGLSKSHAMTGWRIGLI 249

Length = 391

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score = 95.3 bits (238), Expect = 4e-22
 Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y    G    R AIA+ LNR     L+ D + +T G   A+ V L  +  PG  +++  P
Sbjct: 69  YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAP 128

Query: 143 GFPYYEARATHSHLEVRHFDLLPAK--GWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
            F  Y     +   ++    ++P     ++ DLDA+EA     T A++I +P NP G VY
Sbjct: 129 YFVEYRFYVDNHGGKLV---VVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVY 185

Query: 201 TYQHLQKIA----ETAKKLG--IMVIADEVYDHLAFGNT--PFVPMGVFGSIVPVLTLGS 252
           + + L+ +A    E +K+ G  I +I+DE Y  + +     P++      SIV    + S
Sbjct: 186 SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIV----VYS 241

Query: 253 ISKRWIVPGWRLGWLVTSD 271
            SK   +PG R+G++  + 
Sbjct: 242 FSKSLSLPGERIGYIAVNP 260

Length = 394

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 94  RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF-PYYEARAT 152
            AIA +  +   +++ P+ +    G    I + +  L +PG  +++  P + P+Y A   
Sbjct: 67  AAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAI-K 125

Query: 153 HSHLEVRHFDL-LPAKGWEVDLDAVE-ALADENTVALVIINPGNPCGNVYTYQHLQKIAE 210
            +  +V    L      +E+D DA+E A  DE     ++ NP NP G V+T + L+KIAE
Sbjct: 126 LNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAE 185

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLG 265
              + G+ VI+DE++  L  G    +P   F S+        +TL S SK + + G +  
Sbjct: 186 LCLRHGVRVISDEIHADLVLGGHKHIP---FASLSERFADNSITLTSASKTFNLAGLKCA 242

Query: 266 WLVTSDP 272
           +++ S+ 
Sbjct: 243 YIIISNR 249

Length = 388

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score = 88.9 bits (221), Expect = 4e-20
 Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 13/179 (7%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA 151
            R A+A+Y        + P++V +  G  + IE+++     PG  +L+P P F  YE  A
Sbjct: 62  LRAALAEYYG-----VVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAA 116

Query: 152 THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
             +  EV      P K + +DLDA+ A   + T  + + NP NP G +   + L+ + E 
Sbjct: 117 QLAGAEVVKV---PLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEA 173

Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
             + G++VI DE Y    F     + +  +     ++ L + SK + + G R+G+ + +
Sbjct: 174 LPEGGLVVI-DEAYIE--FSPESSLELLKYPP--NLIVLRTFSKAFGLAGLRVGYAIAN 227

Length = 356

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 88.2 bits (219), Expect = 1e-19
 Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 21/229 (9%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR--DL 104
           LI L  G P           A  AI     +  +  Y+   G+L  R+A  +++    DL
Sbjct: 30  LISLTIGQPDFPTPSHVKEAAKRAI-----TENYTSYTHNAGLLELRKAACNFVKDKYDL 84

Query: 105 PYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARATHSHLEV 158
            Y  SP+ ++ +T+G ++AI++    +  PG  ++LP P +P YE       A    ++ 
Sbjct: 85  HY--SPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDT 142

Query: 159 RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218
           R      + G+ +  +A+E    E T  +V+  P NP G   + + LQ IA+  K   I 
Sbjct: 143 R------STGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIF 196

Query: 219 VIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267
           V++DE+Y  L +                 + +  +SK   + GWR+G+L
Sbjct: 197 VLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFL 245

Length = 387

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score = 85.7 bits (212), Expect = 8e-19
 Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 20/286 (6%)

Query: 29  RGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG 88
           R  +  L E  +K +   +I LG G+P     F T     +A   ++    +  Y+   G
Sbjct: 19  RSKIRELFERASKMEN--VISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAG 71

Query: 89  ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE 148
           I   R AIA+Y  +     +  D+V +T G  +A  +    L   G  +++P P F  Y 
Sbjct: 72  IPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYV 131

Query: 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKI 208
             A  +  +     L     ++ D D +  L  + T  +VI  P NP G     +  + I
Sbjct: 132 EDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAI 191

Query: 209 AETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           A+ A+   I +++DE Y+H  +      PM  +     +L   S SK + + GWRLG+++
Sbjct: 192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILA-NSFSKTFAMTGWRLGFVI 250

Query: 269 TSDPNGILQD-----SGIVDSIKSFLNISSDPATFIQFLKSSRKLK 309
              P  +++D     + I+ ++ SF+ I+      I+ L+S    K
Sbjct: 251 A--PEQVIKDMIKLHAYIIGNVASFVQIAG-----IEALRSKESWK 289

Length = 391

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 85.5 bits (212), Expect = 1e-18
 Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 30/241 (12%)

Query: 43  DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR 102
             R +I +G G+P     F      V+A   ++R      Y+S +G+ P R AIA +  R
Sbjct: 28  AGRDIIHMGIGEPD----FTAPEPVVEAAARALRRGVTQ-YTSALGLAPLREAIAAWYAR 82

Query: 103 DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHF- 161
                ++P+ + +T G + A+ +    L   G  +L+P P +P             RHF 
Sbjct: 83  RFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCN-----------RHFV 131

Query: 162 -------DLLP---AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
                   L+P   A+ +++    VEA   E T  +++ +P NP G       L++I E 
Sbjct: 132 AAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEA 191

Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
            +  G   I DE+Y  L++   P V     G    V+T+ S SK + + GWRLGWLV  +
Sbjct: 192 VRARGGFTIVDEIYQGLSYDAAP-VSALSLGD--DVITINSFSKYFNMTGWRLGWLVVPE 248

Query: 272 P 272
            
Sbjct: 249 A 249

Length = 388

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 84.8 bits (210), Expect = 2e-18
 Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 14/228 (6%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           +I LG GDP   P   T    V+A+  +  +   + Y S  G+L  R+A+AD+  R    
Sbjct: 31  VISLGIGDPD-LP---TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGV 86

Query: 107 KLSPDDVYLTL-GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
           +L P+   L+L G  + I  I      PG  +L+P PG+P Y      +  E     L  
Sbjct: 87  ELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKE 146

Query: 166 AKGWEVDLDAVEALADENTVA---LVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221
             G+  D DA+     E+      L+ IN P NP G V   +  +++ E AK+  I+V  
Sbjct: 147 ENGFLPDFDAI----PEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCH 202

Query: 222 DEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           D  Y  + F G      + V G+    +   S+SK + + GWR+G  V
Sbjct: 203 DNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAV 250

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 83.6 bits (207), Expect = 4e-18
 Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 19/220 (8%)

Query: 69  DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILT 128
           +A++  +    +  Y    G    R  I   L       L  D+  +T G T+++ +++ 
Sbjct: 48  EAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALITAGATESLYLVMR 101

Query: 129 VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALADENTVAL 187
               PG N + P PG+   +  A+    EV    +      +++  + V+   DENT  +
Sbjct: 102 AFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLI 161

Query: 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247
            +I+P NP G+ YT + +++ AE A+     ++ D  Y   A  +T         ++   
Sbjct: 162 YLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTV--- 218

Query: 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287
            T  S SK + + G R+G +V +          +++ +KS
Sbjct: 219 -TSYSFSKIFGMAGLRIGAVVAT--------PDLIEVVKS 249

Length = 380

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 23/192 (11%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           I L  G    FP F      V+A+ +++  A  N Y    G+   R AIA    R    +
Sbjct: 33  INLSQG----FPDFDGPPYLVEALAYAMA-AGHNQYPPMTGVAALREAIAAKTARLYGRQ 87

Query: 108 LSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-------ARATHSHLEVR 159
              D ++ +T G T+A+   +  L RPG  +++  P +  Y         RA    L+  
Sbjct: 88  YDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPP 147

Query: 160 HFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIM 218
            F         VD     A     T  L+I+N P NP G V++   ++ + +      I 
Sbjct: 148 DF--------RVDWQRFAAAISPRT-RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIY 198

Query: 219 VIADEVYDHLAF 230
           V++DEVY+H+ F
Sbjct: 199 VLSDEVYEHIVF 210

Length = 386

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score = 82.4 bits (204), Expect = 1e-17
 Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 8/213 (3%)

Query: 67  AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD-VYLTLGCTQAIEV 125
           A++A+ + + +   + Y +  GI P   AI   L +D   +L+ +  + +T G   A   
Sbjct: 45  AIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104

Query: 126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAVEALADENT 184
            +  +  PG  I+L  P   YY        +      L+P    +++  +A+E      T
Sbjct: 105 AILAITDPGDEIILNTP---YYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKT 161

Query: 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGS 243
            A+V I+P NP G VY    L+ + +   + GI  I+DE Y++  +     F P  + GS
Sbjct: 162 RAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGS 221

Query: 244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276
               ++L S+SK +    WR+G++V   P  +L
Sbjct: 222 GNHTISLYSLSKAYGFASWRIGYMVI--PIHLL 252

Length = 389

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 82.0 bits (203), Expect = 2e-17
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 28/222 (12%)

Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA-RRAIADYLNRDLPYKLSPDDVYLTL 117
           P F TA   V A   ++ +     Y++  G LPA R AIA +  +     + P+ + +T 
Sbjct: 42  PDFTTAEPIVAAGQAALAAGHTR-YTAARG-LPALREAIAGFYAQRYGVDVDPERILVTP 99

Query: 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-----------PA 166
           G + A+ +  ++L  PG + LL  PG+P             RHF  L           P 
Sbjct: 100 GGSGALLLASSLLVDPGKHWLLADPGYPCN-----------RHFLRLVEGAAQLVPVGPD 148

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
             +++    VE   + +TV  ++ +P NP G + +   L  +++  +  G  ++ DE+Y 
Sbjct: 149 SRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYH 208

Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            L +G      + V         L S SK + + GWRLGWLV
Sbjct: 209 GLTYGVDAASVLEVDDDA---FVLNSFSKYFGMTGWRLGWLV 247

Length = 387

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 80.1 bits (198), Expect = 6e-17
 Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 35/273 (12%)

Query: 32  LNSLLENLNKNDTRPLIPLGHGDPS-AFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
           L +LL  +    ++P I L  G+P    P+F      ++A+  ++     + Y +T G+ 
Sbjct: 15  LAALLAGVTPPASKPPIALSIGEPKHPTPAF-----VLEALRENLHG--LSTYPTTKGLP 67

Query: 91  PARRAIADYLNR--DLPYKLSPDDVYL-TLGCTQAIEVIL-TVLARPG-ANILLPRPGFP 145
             R+AIA +L R  DLP  + P+   L   G  +A+      V+       +++P P + 
Sbjct: 68  ELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQ 127

Query: 146 YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205
            YE  A  +  E    +     G+  D DAV          L + +PGNP G V +   L
Sbjct: 128 IYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTL 187

Query: 206 QKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVF--------GSIVPVLTLGSISKR 256
           +K+ E A + G ++ +DE Y  L F    P  P G+               L   S+SKR
Sbjct: 188 KKLIELADQYGFIIASDECYSELYFDEGNP--PAGLLQAAAQLGRDDFRRCLVFHSLSKR 245

Query: 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289
             +PG R G++           +G  + +K+FL
Sbjct: 246 SNLPGLRSGFV-----------AGDAEILKAFL 267

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 79.2 bits (196), Expect = 1e-16
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 19/232 (8%)

Query: 48  IPLGHGDPSAF--PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLP 105
           I LG G P        R A  A DA++        N Y   +G+   R+A+A +  R   
Sbjct: 29  INLGQGFPDDPGPEDVRRA--AADALLD-----GSNQYPPMMGLPELRQAVAAHYARFQG 81

Query: 106 YKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSHLEVRHF 161
             L P+ +V +T G T+A+   L  L  PG  ++L +P +  Y     RA      VR  
Sbjct: 82  LDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVR-- 139

Query: 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221
             L    W +   A+ A     T A+++ NP NP G V+  + L  +AE  ++   + I 
Sbjct: 140 --LEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAIC 197

Query: 222 DEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           DEV++H+ F     +P M + G     + +GS  K + + GW++G+ V + P
Sbjct: 198 DEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGF-VCAAP 248

Length = 387

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 26/183 (14%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           ++A+ADY        + P+ + L  G  + IE+++     PG  +L+P P +  YE  A 
Sbjct: 60  KQALADYYG------VDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAK 113

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
               EV    L   +  ++DL+ +    D+    + + +P NP GN+ +   ++ + E  
Sbjct: 114 IHGAEVVKVPL--DEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERT 171

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-------VLTLGSISKRWIVPGWRLG 265
            +  ++V+ DE Y    F   P        S +P       ++ L ++SK + + G R+G
Sbjct: 172 PEDALVVV-DEAYGE--FSGEP--------STLPLLAEYPNLIVLRTLSKAFGLAGLRIG 220

Query: 266 WLV 268
           + +
Sbjct: 221 YAI 223

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 79.2 bits (195), Expect = 2e-16
 Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 9/151 (5%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPR 141
           YS + GI   R AIA  +     +   P+D++LT G + A+ +++ +L R   + IL P 
Sbjct: 164 YSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPI 223

Query: 142 PGFPYYEAR-ATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTV-----ALVIINPGN 194
           P +P Y A  A H    V ++ L  A GW +++  ++  L D  +      ALV+INPGN
Sbjct: 224 PQYPLYSASIALHGGTLVPYY-LDEATGWGLEISELKKQLEDARSKGITVRALVVINPGN 282

Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
           P G V   ++ + I E  K+ G++++ADEVY
Sbjct: 283 PTGQVLAEENQRDIVEFCKQEGLVLLADEVY 313

Length = 534

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 78.5 bits (194), Expect = 3e-16
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 13/195 (6%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y    G+   R A A + +R     +SP+ V++T GC QA    +  LA  G  ++LP P
Sbjct: 63  YGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLP 122

Query: 143 GFPYYEARATHSHLEVR--HFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
              Y+  +     L +R  +       G   D  A EAL    T A+ ++ P NP G VY
Sbjct: 123 W--YFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVY 180

Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISK 255
             + L ++ + A++ GI +I DE Y     G     P  +F    P     ++ L S SK
Sbjct: 181 PPELLHELYDLARRHGIALILDETYRDFDSGGGA--PHDLFAD--PDWDDTLVHLYSFSK 236

Query: 256 RWIVPGWRLGWLVTS 270
            + + G R+G +V S
Sbjct: 237 SYALTGHRVGAVVAS 251

Length = 386

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score = 78.1 bits (193), Expect = 3e-16
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 11/118 (9%)

Query: 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
           EV ++ L    GW  DLD +  L   NT  + I N  NP G +    +L++I E A+ + 
Sbjct: 127 EVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVD 186

Query: 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPV----LTLGSISKRWIVPGWRLGWLVTS 270
             V++DEVY  L          G   SI  +    ++  S+SK + +PG R+GW+  +
Sbjct: 187 AYVLSDEVYRPLDED-------GSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN 237

Length = 373

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 77.9 bits (192), Expect = 3e-16
 Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 7/176 (3%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R AIAD   R          V  T G ++AI ++LT L RPG  +++  P +      A 
Sbjct: 57  RAAIADRW-RGGD----AHVVMTTHGSSEAIYLVLTALLRPGDEVVVVDPAYHSLSHLAV 111

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
            +  EVR + LL  +G+  DLDA+ AL    T A+V+  P NP G   T + L ++ E A
Sbjct: 112 ATGCEVRPWPLLAVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVTPRELDELLERA 171

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            + G +++ D  +  L     P            V++ G++SK + +PG R+GW V
Sbjct: 172 ARSGAVLLWDNAFADLVHDAPPLPDPSALYD--RVISFGTLSKAFGLPGLRVGWCV 225

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 75.6 bits (186), Expect = 2e-15
 Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 13/233 (5%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-GILPARRAIADY 99
                 +I L  G+P   P    A    + +VH+        Y  T+ GI     A+ +Y
Sbjct: 28  IAAGHKMIDLSIGNPDMPP----ADFVREEMVHTANQK--ESYGYTLSGIQEFHEAVTEY 81

Query: 100 LNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEV 158
            N      L+ D +V L +G    +  +  V A PG  IL+P PG+  YE     +    
Sbjct: 82  YNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATS 141

Query: 159 RHFDLLPAKGWEVDLDAV-EALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLG 216
            +  L     +  DL+ + E +AD+    ++I+N PGNP   +      +++   AKK  
Sbjct: 142 YYMPLKKENDFLPDLELIPEEIADK--AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHN 199

Query: 217 IMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           I+V+ D  Y    F GN P   + V G+    + + S+SK + + G R+G+++
Sbjct: 200 IIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI 252

Length = 399

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 74.0 bits (182), Expect = 6e-15
 Identities = 60/201 (29%), Positives = 86/201 (42%), Gaps = 30/201 (14%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVLA-RPGANILLP 140
           Y  T G    R AI D+L R      L P  V   +G  + +  + T+L   PG  +++P
Sbjct: 52  YPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIP 111

Query: 141 RPGFPYYE-----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGN 194
              +P YE     A AT     V   D         +LD V          L+ +N PGN
Sbjct: 112 ELAYPTYEVGALLAGATP----VAADDPT-------ELDPV-------GPDLIWLNSPGN 153

Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV---PMGVFGSIVPVLTLG 251
           P G V +   L+ I   A++ G +V +DE Y  L +   P     P    G    +L + 
Sbjct: 154 PTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVH 213

Query: 252 SISKRWIVPGWRLGWLVTSDP 272
           S+SKR  + G+R G+ V  DP
Sbjct: 214 SLSKRSNLAGYRAGF-VAGDP 233

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 73.4 bits (180), Expect = 1e-14
 Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 6/189 (3%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGAN---IL 138
           Y S +G    R AI+ +  R    KL PD  V  + G  +AI     V   P  +   ++
Sbjct: 32  YPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVI 91

Query: 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN 198
              PG+P YE  A  +  E     L    G+ + L+ VE    E T  + I  P NP G 
Sbjct: 92  FGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGA 151

Query: 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258
                +L++     ++ GI++ +DE Y  + FG  P   + V   I  VL   S+SKR  
Sbjct: 152 TAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSG 209

Query: 259 VPGWRLGWL 267
           + G+R G++
Sbjct: 210 MTGYRSGFV 218

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 72.4 bits (178), Expect = 3e-14
 Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           +I LG G+P       T    VD +  + +  R + YS++ GI   RRA A Y  R    
Sbjct: 32  IIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGV 87

Query: 107 KLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
           KL+PD  V  TLG  +    +   +  PG  IL P P +P +      +   +R     P
Sbjct: 88  KLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEP 147

Query: 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
            + +   L+     +    +AL++  P NP   V      + +   AKK  I++++D  Y
Sbjct: 148 DEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY 207

Query: 226 DHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
             + F GN P   + V G+    +   S+SK + + GWR+G+ V
Sbjct: 208 SEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV 251

Length = 405

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 71.5 bits (176), Expect = 5e-14
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 10/225 (4%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           I LG GDP   P   T    ++A+  +V     + Y S  G+L  R+A+AD+  R    +
Sbjct: 34  ISLGIGDPD-LP---TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVE 89

Query: 108 LSPDDVYLTL-GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
           L P+   ++L G  + I  I      PG  +L+P PG+P Y+     +  E     L   
Sbjct: 90  LDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEE 149

Query: 167 KGWEVDLDAV-EALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
            G+  DLDA+ E +A +    L+ IN P NP G V   +  +++ + AKK  I+V  D  
Sbjct: 150 NGFLPDLDAIPEDVAKK--AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAA 207

Query: 225 YDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           Y  +A+ G  P   + V G+    +   S+SK + + GWR+G+ V
Sbjct: 208 YSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAV 252

Length = 385

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 71.1 bits (175), Expect = 6e-14
 Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 29/181 (16%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA 151
            R A A Y      Y L    V    G  +AI ++  +LA     +L+  P +  Y    
Sbjct: 52  LRAAAAAY------YGLPAASVLPVNGAQEAIYLLPRLLAP--GRVLVLAPTYSEYARAW 103

Query: 152 THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
             +  EV             DLD + A  +E  + LV+ NP NP G +   + L  +A  
Sbjct: 104 RAAGHEVVELP---------DLDRLPAALEEADL-LVVCNPNNPTGRLIPPETLLALAAR 153

Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVP----MGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267
            +  G  ++ DE     AF    F P             ++ L S++K + + G RLG++
Sbjct: 154 LRARGGWLVVDE-----AFI--DFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFV 206

Query: 268 V 268
           V
Sbjct: 207 V 207

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 70.1 bits (172), Expect = 1e-13
 Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 9/190 (4%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+   G    R+AI   L R      + +++ +  G  QAI + L      G  +++P P
Sbjct: 66  YTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAP 125

Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  Y      +            +G+++  +A+EA     T  L++  P NP G VY+ 
Sbjct: 126 YWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSR 185

Query: 203 QHLQKIAET-AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKR 256
             L+ +A+   +   ++V+ D++YDH+ F +    P     +  P     VL    +SK 
Sbjct: 186 AELRALADVLLRHPHVLVLTDDIYDHIRFDDE---PTPHLLAAAPELRDRVLVTNGVSKT 242

Query: 257 WIVPGWRLGW 266
           + + GWR+G+
Sbjct: 243 YAMTGWRIGY 252

Length = 402

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 69.5 bits (171), Expect = 2e-13
 Identities = 74/253 (29%), Positives = 107/253 (42%), Gaps = 32/253 (12%)

Query: 32  LNSLLENLNKNDTRPLIPLGHGDPS-AFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
           L +L   +      P I L  G+P    P+F       DA+  ++       Y +T G+ 
Sbjct: 16  LRALFAGVTPPADLPPISLSIGEPKHPTPAF-----IKDALAANL--DGLASYPTTAGLP 68

Query: 91  PARRAIADYLNR--DLPYKLSPDDVYL-TLGCTQAI-EVILTVLAR--PGANILLPRPGF 144
             R AIA +L R   LP  L P    L   G  +A+     TV+ R  PG  ++ P P +
Sbjct: 69  ALREAIAAWLERRYGLP-ALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFY 127

Query: 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204
             YE  A  +  E    +  PA  +  D DAV A     T  L + +PGNP G V     
Sbjct: 128 QIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDD 187

Query: 205 LQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGV-----------FGSIVPVLTLGS 252
            +K+   + + G ++ +DE Y  + F    P  P+G+           F  +V V    S
Sbjct: 188 WKKLFALSDRYGFVIASDECYSEIYFDEAAP--PLGLLEAAAELGRDDFKRLV-VFH--S 242

Query: 253 ISKRWIVPGWRLG 265
           +SKR  VPG R G
Sbjct: 243 LSKRSNVPGLRSG 255

Length = 396

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 68.6 bits (168), Expect = 5e-13
 Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 27/185 (14%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           A+AD  +      +SP+ V+L  G   A++ +   +  PG  +L+P PGF YY   A + 
Sbjct: 73  ALADRWD------VSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYH 126

Query: 155 HLEVRHFDLLPAKGWEVDLDAV-EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
           H EVR + +  A  +E   D V +A   E  V L   +P NP G+      ++ +AE   
Sbjct: 127 HGEVREYPVSKADDFEQTADTVLDAYDGERIVYLT--SPHNPTGSEIPLDEVEALAERTD 184

Query: 214 KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-------VLTLGSISKRWIVPGWRLGW 266
           +   +V+ DE Y    F   P        S V        V  L + SK + + G RLG+
Sbjct: 185 E-ETLVVVDEAYGE--FAERP--------SAVALVEERDDVAVLRTFSKAYGLAGLRLGY 233

Query: 267 LVTSD 271
            V  +
Sbjct: 234 AVVPE 238

Length = 357

>gnl|CDD|177996 PLN02368, PLN02368, alanine transaminase

 Score = 68.3 bits (167), Expect = 7e-13
 Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 7/150 (4%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-PGANILLPR 141
           YS + G+   R+ +A+++ R   Y   P+ ++LT G ++ +  IL  + R     +L+P 
Sbjct: 103 YSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPV 162

Query: 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV-----EALADENTV-ALVIINPGNP 195
           P +P Y A  +     +  + L  ++ W +D++ +     +A +   TV A+VIINPGNP
Sbjct: 163 PQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNP 222

Query: 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
            G   +  +L++I +   +  ++++ DEVY
Sbjct: 223 TGQCLSEANLREILKFCYQERLVLLGDEVY 252

Length = 407

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 68.1 bits (167), Expect = 8e-13
 Identities = 39/187 (20%), Positives = 86/187 (45%), Gaps = 9/187 (4%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA 151
              A+ ++L +   +++ P+ +    G   ++   +  L  PG  +++  P +P + +  
Sbjct: 65  LYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQTPVYPPFLSAV 124

Query: 152 THSHLEVRHFDLLPAKG-WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE 210
             +  E+    L    G +  DL+ +E    E    L++ +P NP G V+T + L ++AE
Sbjct: 125 KSNGRELVLNPLKLDPGRYRFDLEDLEDAITEKARLLLLCSPHNPVGRVWTREELTRLAE 184

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLG 265
              +  ++V++DE++  L +     +P     S+ P      +TL S  K + + G  + 
Sbjct: 185 LCLRHNVVVVSDEIHADLVYPPNKHIP---LASLSPEIAERTVTLLSPGKTFNIAGLNIS 241

Query: 266 WLVTSDP 272
           + +  +P
Sbjct: 242 FAIIPNP 248

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 68.1 bits (167), Expect = 8e-13
 Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 13/233 (5%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100
           K+    LI +G G+P        A  +V  ++        N   +  GI   + A A Y+
Sbjct: 40  KHPDMELIDMGVGEPDEM-----ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYM 94

Query: 101 NRDLPYK-LSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHL-- 156
            +    K + P  +V  ++G   A+ ++ +    PG   L+  PG+P      TH+    
Sbjct: 95  EKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYP---VTGTHTKYYG 151

Query: 157 -EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215
            EV +  LL    +  DLD++     E    L +  P NP G V T +  +++ + AK+ 
Sbjct: 152 GEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKEN 211

Query: 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            I+V+ D  Y  L F   P   + V G+    + + S+SK + + GWRL ++V
Sbjct: 212 NIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV 264

Length = 410

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 67.8 bits (166), Expect = 9e-13
 Identities = 62/208 (29%), Positives = 84/208 (40%), Gaps = 33/208 (15%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTL--------GCTQ--------AIEVILTVLARPGA 135
            +RAI D L+    Y   PD  Y  L                      E I  V      
Sbjct: 38  LKRAIIDNLDCAERY---PDVEYRHLHQALARHHQVPASWILAGNGETESIFAV-----V 89

Query: 136 NILLPR------PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189
           + L PR      PGF  Y         E+R + L  A GW++    +EAL  +    L +
Sbjct: 90  SGLKPRRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLD-CLFL 148

Query: 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249
             P NP G +   Q LQ IAE  K L I +I DE +       T F+P       + VL 
Sbjct: 149 CTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLR 208

Query: 250 LGSISKRWIVPGWRLGWLVTSDPNGILQ 277
             S++K + +PG RLG+LV SD   + +
Sbjct: 209 --SLTKFYAIPGLRLGYLVNSDDAAVAR 234

Length = 356

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 66.8 bits (163), Expect = 2e-12
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 22/197 (11%)

Query: 88  GILPARRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP 145
           G+   R+A+A ++   R    +  PD + LT G T A E++  +LA PG  +L+P P +P
Sbjct: 96  GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYP 155

Query: 146 YYEARATHSHLEVR----HFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNP 195
            ++ R       V+    H D   +  ++V   A+EA   E          ++I NP NP
Sbjct: 156 GFD-RDLRWRTGVKIVPIHCD--SSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNP 212

Query: 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM-------GVFGSIVPVL 248
            G       L+ I +   +  I +++DE+Y    F  + FV +       G  G    V 
Sbjct: 213 LGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVH 272

Query: 249 TLGSISKRWIVPGWRLG 265
            + S+SK   +PG+R+G
Sbjct: 273 IVYSLSKDLGLPGFRVG 289

Length = 447

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 65.9 bits (161), Expect = 5e-12
 Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 16/229 (6%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           +I    G+P       T    V+ +    +    + YS++ GI   RRAI+ +       
Sbjct: 31  IIDFSMGNPDG----PTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDV 86

Query: 107 KLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
            + P+ +  +T+G  + +  ++      G  +L+P P +P +   A  +  +VR   L+ 
Sbjct: 87  DIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVE 146

Query: 166 AKGWEVDLDAVEALADENTV----ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221
                VD       A   +      +++  P NP       +  +K+   AK+  ++V+ 
Sbjct: 147 ----GVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVH 202

Query: 222 DEVYDHLAFGN--TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           D  Y  + +     P + M V G+    +   ++SK + + GWR+G++V
Sbjct: 203 DLAYADIVYDGWKAPSI-MQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV 250

Length = 395

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 65.5 bits (160), Expect = 6e-12
 Identities = 67/251 (26%), Positives = 99/251 (39%), Gaps = 32/251 (12%)

Query: 32  LNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91
           L  LL+ +  N     + L  G+P     F T     DA+ ++  +   N Y  + G   
Sbjct: 11  LRELLKEITPNKEYKGLDLTIGEPQ----FETPKFIQDALKNN--AHLLNKYPKSAGEES 64

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILT----VLAR-PGANILLPRPGFPY 146
            R A   +  R    +L  +++  T G     EV+      VL       I  P P +  
Sbjct: 65  LREAQRGFFKRRFKIELKENELIPTFGTR---EVLFNFPQFVLFDKQNPTIAYPNPFYQI 121

Query: 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVE-ALADENTVALVIIN-PGNPCGNVYTYQH 204
           YE  A  S  +V    L     +   L+  E    D     LVI+N P NP G   + + 
Sbjct: 122 YEGAAIASRAKVLLMPLTKENDFTPSLNEKELQEVD-----LVILNSPNNPTGRTLSLEE 176

Query: 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF--------GSIVPVLTLGSISKR 256
           L +  + A K   ++I DE Y  + + NTP  P  +          S   VL + SISKR
Sbjct: 177 LIEWVKLALKHDFILINDECYSEI-YENTP--PPSLLEASILVGNESFKNVLVINSISKR 233

Query: 257 WIVPGWRLGWL 267
              PG R G++
Sbjct: 234 SSAPGLRSGFI 244

Length = 374

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 11/182 (6%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R+ IA +       +L  ++V L  G T+ I  I+ V  +P   +L+  P F  YE    
Sbjct: 60  RKRIASF------EQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYERALK 111

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAET 211
               E+ + +L     +  +   +E + +E  + LV + NP NP G + + + ++KI + 
Sbjct: 112 AFDAEIEYAELTEETNFAANEIVLEEIKEE--IDLVFLCNPNNPTGQLISKEEMKKILDK 169

Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
            +K  I +I DE +      N     +    +   ++ + + +K + +PG RLG+ +TS+
Sbjct: 170 CEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229

Query: 272 PN 273
            N
Sbjct: 230 KN 231

Length = 354

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 6/224 (2%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           LI LG G+P            ++A + ++   + + Y    G    R+AI D+ +R    
Sbjct: 37  LIDLGMGNPDGA----APQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGV 92

Query: 107 KLSPDDVYLTL-GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
           +L PD   L L G  + +  +      PG  +L+P P +P +      +  ++    L P
Sbjct: 93  ELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKP 152

Query: 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
              W +DL ++     +    L    P NP       +  ++I   A+K  IM++ D  Y
Sbjct: 153 ENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCY 212

Query: 226 DHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
             LAF G  P   + + G+    +   ++SK + + GWR+G++V
Sbjct: 213 AELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVV 256

Length = 394

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 18/219 (8%)

Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTL 117
           P+F      V+ +  ++R    N Y+   GI   R A+A+   R    +  P  +V +  
Sbjct: 39  PNFAPDPALVEGVARAMRDGH-NQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIA 97

Query: 118 GCTQAIEVILTVLARPGANILLPRPGFPYYE-------ARATHSHLEVRHFDLLPAKGWE 170
             ++ +   ++ L  PG  ++   P F  Y        A      L    F         
Sbjct: 98  SASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDF--------R 149

Query: 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
           V+ D V A     T  +++  P NP   V++   L ++A+  +   I++++DEVY+H+ F
Sbjct: 150 VNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVF 209

Query: 231 GNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLV 268
                  M     +    + + S  K + V GWR+G+ +
Sbjct: 210 DGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCL 248

Length = 384

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 59/273 (21%)

Query: 24  SGITVRGVLNSLLENLNKN-DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHS-----VRS 77
           SGIT       L+++LN    T   I LG G+P+  P        ++          + S
Sbjct: 14  SGIT------QLMDDLNDGLRTPGAIMLGGGNPAHIP-------EMEDYFRDLLADLLAS 60

Query: 78  ARFN---C-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP 133
            +       Y    G      A+A  LN    + +SP ++ LT G   A   +  + A  
Sbjct: 61  GKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGR 120

Query: 134 GAN-----ILLP-RPGFPYYEARATHSHLEVRHF-------DLLPAK--GWEVDLDAVEA 178
            A+     IL P  P +  Y      + LE   F       +LLP     + VD + +  
Sbjct: 121 RADGSLKKILFPLAPEYIGY----ADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLHI 176

Query: 179 LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238
             DE+T A+ +  P NP GNV T + L+K+   A++  I ++ D      A+G  PF P 
Sbjct: 177 --DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLID-----NAYG-PPF-PG 227

Query: 239 GVFGSIVP------VLTLGSISKRWIVPGWRLG 265
            +F    P      +L + S+SK  + PG R G
Sbjct: 228 IIFSEATPLWNPNIILCM-SLSKLGL-PGVRCG 258

Length = 416

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R  +A +L       +  + +    G  + I++I   L  PG N ++  P F  Y   A 
Sbjct: 70  RTKVAKHLG------VDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAI 123

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
               EVR    +P K    DL+A+    DE T  + I NP NP G    ++ L    E+ 
Sbjct: 124 IEGAEVRE---VPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESV 180

Query: 213 KKLGIMVIADEVY 225
               ++V+ DE Y
Sbjct: 181 PS-HVLVVLDEAY 192

Length = 359

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 30/201 (14%)

Query: 83  YSSTVGILPARRAIADYLNRDLPY-KLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLP 140
           Y +T G    R AI  +L R      L P  V   +G  + +  + T+L   PG  +++P
Sbjct: 58  YPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIP 117

Query: 141 RPGFPYYE-----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGN 194
              +P YE     A AT                  V  D++  L  +   AL+ +N P N
Sbjct: 118 ELAYPTYEVGARLAGATV-----------------VRADSLTELGPQR-PALIWLNSPSN 159

Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV---PMGVFGSIVPVLTLG 251
           P G V    HL+K+   A++ G +V +DE Y  L +   P     P    G    +L + 
Sbjct: 160 PTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVH 219

Query: 252 SISKRWIVPGWRLGWLVTSDP 272
           S+SK+  + G+R G+ V  DP
Sbjct: 220 SLSKQSNLAGYRAGF-VAGDP 239

Length = 364

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 45/272 (16%)

Query: 24  SGITVRGVLNSLLENLNKNDTRP-LIPLGHGDPSAFPS----FRTASVAVDAIVHSVRSA 78
           SGIT       L+++LN     P  I LG G+P+  P     F+     + A       A
Sbjct: 14  SGIT------QLMDDLNDGLRTPGAIMLGGGNPARIPEMDDYFQDLLAEMLA-SGKATEA 66

Query: 79  RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN-- 136
             N Y    G      A+A  L R+  + ++  ++ LT G   A   +  + A   ++  
Sbjct: 67  LCN-YDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGT 125

Query: 137 ---ILLPRPGFPYYEARATHSHLEVRHF-------DLLPAK--GWEVDLDAVEALADENT 184
              ILLP    P Y   A  + LE   F       +LLPA    + VD + +     E+T
Sbjct: 126 EKKILLPLA--PEYIGYAD-AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GEST 180

Query: 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244
            A+ +  P NP GNV T + L K+   A++ GI +I D  Y        PF P  +F   
Sbjct: 181 GAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAY------GVPF-PGIIFSDA 233

Query: 245 VP-----VLTLGSISKRWIVPGWRLGWLVTSD 271
            P     ++   S+SK  + PG R G ++ ++
Sbjct: 234 TPLWNENIILCMSLSKLGL-PGSRCGIIIANE 264

Length = 417

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 58.8 bits (143), Expect = 9e-10
 Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 10/226 (4%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           +I LG G+P   P   T    V+A+  +  +   + YS   G    + A AD+  R+   
Sbjct: 34  VINLGQGNPDQ-P---TPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGV 89

Query: 107 KLSPDDVYLTLGCTQAIEVILTV-LARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
            L P+     L   +A  V L   L  PG  IL+P PG+P Y +    +  +     L+ 
Sbjct: 90  TLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIA 149

Query: 166 AKGWEVDLDAV-EALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
              +  D   + E +A++    L+ +N P NP G V T    ++    AKK  I V+ D 
Sbjct: 150 ENNFLPDYTKIPEEVAEK--AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDF 207

Query: 224 VYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            Y  + F G  P   +   G+    + L ++SK + + GWR+ + V
Sbjct: 208 AYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAV 253

Length = 389

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 41/250 (16%)

Query: 90  LPA-RRAIADYL--NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
           LPA + A+A+++   R       P+ + LT G T A E ++  LA PG   LLP P +P 
Sbjct: 88  LPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPG 147

Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
           ++      + +E+       + G+++   A+E    +          ++I NP NP G  
Sbjct: 148 FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTT 207

Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL----------- 248
            T   L  + +      I +I+DE+Y    F +  FV      S++ VL           
Sbjct: 208 TTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFV------SVMEVLKDRKLENTDVS 261

Query: 249 ----TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS---IKSFLNISSDPATFIQF 301
                + S+SK   +PG+R+G + ++       D  +V +   + SF  +SS     +  
Sbjct: 262 NRVHIVYSLSKDLGLPGFRVGAIYSN-------DEMVVSAATKMSSFGLVSSQTQYLLSA 314

Query: 302 LKSSRKLKRN 311
           L S +K  +N
Sbjct: 315 LLSDKKFTKN 324

Length = 468

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 56.7 bits (137), Expect = 4e-09
 Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 6/183 (3%)

Query: 91  PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR 150
           P  RA+ + +       +  D + L  G    I VI   + RPG  ++   P FP +E  
Sbjct: 71  PQGRALREAIAAR--TGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDY 128

Query: 151 ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE 210
            T     V    + P  G   DLDA+ A        L+  NP NP G+  T   L ++ +
Sbjct: 129 PTMMGARVERVTVTPDLG--FDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLD 186

Query: 211 TAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269
                 ++V+ DE Y   A G+  P     +    +P + L + SK + + G R+G+ + 
Sbjct: 187 ATPPETLIVV-DEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV 245

Query: 270 SDP 272
           SDP
Sbjct: 246 SDP 248

Length = 371

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           DV L  G  + I+++    A+PGA +L P PGF  Y   A  + LE     L     + +
Sbjct: 83  DVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTL 140

Query: 172 DLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
           DL A+ A   E+  ALV +  P NP GN++    +++I E A  L   V+ DE Y    F
Sbjct: 141 DLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGL---VVVDEAYQ--PF 195

Query: 231 GNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
               ++P +  F +++ + T+  +     + G RLG+L 
Sbjct: 196 AGDSWLPRLARFPNLLVMRTVSKLG----LAGLRLGYLA 230

Length = 356

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 10/176 (5%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R+ IA+ L+  +      + V    G  + I++I   + + G NI+     FP Y   A 
Sbjct: 70  RQTIANKLHVKM------EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAI 123

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
               EV+    +       DLD + ++ D +T  + I NP NP G     + L +  E  
Sbjct: 124 IEGCEVKE---VALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGI 180

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            +  ++VI +  Y+++   + P   + +      +L L + SK + +  +R+G+ V
Sbjct: 181 SENTLIVIDEAYYEYVTAKDFPET-LPLLEKHKNILVLRTFSKAYGLASFRVGYAV 235

Length = 366

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
           K   +DLD +E          +  NP NP G VY+ + + +IA  A++ G  VI D++Y 
Sbjct: 162 KRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYS 221

Query: 227 HLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLG 265
            L +  T +  +     I P  V+T+   SK   + G+RLG
Sbjct: 222 RLLYDGTSYTHLRALP-IDPENVITIMGPSKTESLSGYRLG 261

Length = 405

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 55.1 bits (132), Expect = 2e-08
 Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 25/246 (10%)

Query: 88  GILPARRAIADYLNRDLPYKLS--PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP 145
           G+   R+AIA ++ +    K++  P+ V ++ G T A E I+  LA PG   L+P P + 
Sbjct: 95  GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYA 154

Query: 146 YYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVE------ALADENTVALVIINPGNPCGN 198
            ++      + +E+       +  +++ +DA +        +++    L++ NP NP G 
Sbjct: 155 AFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG------- 251
           +     L  +     +  I ++ DE+Y    F    FV +    + V +  +        
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274

Query: 252 -SISKRWIVPGWRLGWLVTSDPNGI-----LQDSGIVDSIKSFL--NISSDPATFIQFL- 302
            S+SK   +PG+R+G + + + + +     +   G+V S    +  ++ SD      FL 
Sbjct: 275 YSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLM 334

Query: 303 KSSRKL 308
           +SSR+L
Sbjct: 335 ESSRRL 340

Length = 496

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 28/223 (12%)

Query: 75  VRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG 134
           V+S++ N Y         R  +A Y +      + P ++++  G  + I +I+      G
Sbjct: 48  VKSSQVNIYPDPTAE-KLREELARYCS------VVPTNIFVGNGSDEIIHLIMLAFINKG 100

Query: 135 ANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII- 190
             ++ P P F  Y      A    + V+       + +  D+ +   + ++    LV + 
Sbjct: 101 DVVIYPHPSFAMYSVYSKIAGAVEIPVKL-----KEDYTYDVGSFIKVIEKYQPKLVFLC 155

Query: 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250
           NP NP G+V   + + KI E ++  GI V+ DE Y    +GNT    +  F +++ + TL
Sbjct: 156 NPNNPTGSVIEREDIIKIIEKSR--GI-VVVDEAYFEF-YGNTIVDVINEFENLIVLRTL 211

Query: 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS 293
              SK + + G R+G+ V ++ N +      ++ +KS  NI+S
Sbjct: 212 ---SKAFGLAGLRVGYAV-ANENIL----KYLNLVKSPYNINS 246

Length = 351

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 28/216 (12%)

Query: 71  IVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL 130
           I   ++   FN Y   +   P R AIA++        L  +++ +  G  + I  ++ + 
Sbjct: 40  IFEELKRVPFNRYPH-ITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLVKLF 92

Query: 131 ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII 190
              G +I++  P F  Y   A  + + V    L   + + +D + +   A  N  A+ I 
Sbjct: 93  E--GKHIVITPPTFGMYSFYAKLNGIPVIDVPL--KEDFTIDGERIAEKAK-NASAVFIC 147

Query: 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250
           +P NP GN+   + + K+ ET    G  V+ DE Y   +  +     +G+      ++ L
Sbjct: 148 SPNNPTGNLQPEEEILKVLET----GKPVVLDEAYAEFSGKSL----IGLIDEYPNLILL 199

Query: 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286
            + SK + + G R G+ + +          I+D++ 
Sbjct: 200 RTFSKAFGLAGIRAGYAIAN--------EEIIDALY 227

Length = 337

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 50.8 bits (122), Expect = 9e-08
 Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 12/161 (7%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF-PYYEAR 150
               +A  L          D        T A E  L  L  PG  +++   G    Y   
Sbjct: 5   LEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVA 58

Query: 151 ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIA 209
           A  +  +     +  A    +D+  +E L  +  VAL++I       G +     L++I 
Sbjct: 59  AELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIR 115

Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250
           + AK+ GI+++ D      A    P V +   G+ V   +L
Sbjct: 116 KIAKEYGILLLVDAASAGGASPA-PGVLIPEGGADVVTFSL 155

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 18/107 (16%)

Query: 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV------DLDA 175
           AI  +L  L + G +++     +       T+   E     LLP  G EV      D +A
Sbjct: 67  AISTVLLALLKAGDHVVASDDLY-----GGTYRLFE----RLLPKLGIEVTFVDPDDPEA 117

Query: 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222
           +EA     T  + + +P NP   V     ++ IAE A + G +++ D
Sbjct: 118 LEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVD 161

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 30/189 (15%)

Query: 96  IADYLNRDLPYKLSPD---DVYLTLGCTQAIEVILTVLA-----RPGANILLPRPGF-PY 146
           + DYL +++     P    D++   G T A+  I   L      + G  I L  P F PY
Sbjct: 144 VKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPY 203

Query: 147 YE-ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205
            E        LEV H +      W+     +E L D +  AL ++NP NP     + + L
Sbjct: 204 LEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESL 263

Query: 206 QKIAETAKK----LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL---TLG--SISKR 256
           +KIA+   +    L  M+I D+VY     G   FV    F S+  VL   T+   S SK 
Sbjct: 264 EKIADIVNEKRPDL--MIITDDVY-----GT--FVDD--FRSLFAVLPYNTILVYSFSKY 312

Query: 257 WIVPGWRLG 265
           +   GWRLG
Sbjct: 313 FGATGWRLG 321

Length = 527

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 17/223 (7%)

Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTL 117
           P   T    +D +  S +  + + YS + GI   R AI ++  R     L P+ +V  T+
Sbjct: 43  PDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATM 102

Query: 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA-- 175
           G  +    ++  +  PG   ++P P +P +      +   V    L   + +E+D D   
Sbjct: 103 GSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFF 162

Query: 176 --VEALADENT--VALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
             +E    E++     V++N P NP          +++   AKK    +I+D  Y  + F
Sbjct: 163 ENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITF 222

Query: 231 GN--TPFVPMGVFGS---IVPVLTLGSISKRWIVPGWRLGWLV 268
               TP + + V G+    V   TL   SK + + GWR+G++V
Sbjct: 223 DGYKTPSI-LEVEGAKDVAVESYTL---SKSYNMAGWRVGFVV 261

Length = 403

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 50.1 bits (121), Expect = 6e-07
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 14/135 (10%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           + A+A+       + + P+ + L  G  + +E++      PG  ++    GF  Y   A 
Sbjct: 73  KAALAEK------FGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQ 126

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
               +      +PAK +  DLDA+ A     T  + I NP NP G   TY   +++    
Sbjct: 127 AVGAKPVE---VPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTG---TYLPAEEVERFL 180

Query: 213 KKL--GIMVIADEVY 225
             +   ++V+ DE Y
Sbjct: 181 AGVPPDVLVVLDEAY 195

Length = 367

>gnl|CDD|216267 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 14/105 (13%)

Query: 122 AIEVILTVLARPGANILLPR----PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
           AI   L  L + G +++         +  +E       +EV   D         DLDA+E
Sbjct: 79  AIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVTFVDPS-------DLDALE 131

Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222
           A    NT A+ +  P NP   V     ++ IA+ AKK G +V+ D
Sbjct: 132 AAIKPNTKAVFLETPTNPLLKVVD---IEAIAKIAKKHGALVVVD 173

This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 382

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 69/247 (27%), Positives = 99/247 (40%), Gaps = 53/247 (21%)

Query: 42  NDTRPLIPLG-HGDPSAFPSFRTASVAV----------DAIVHSVRSARFNCYSSTVGIL 90
           +DT PL  L  HGD  A P     +V V          + +   +       Y ST    
Sbjct: 4   SDTSPLAALRHHGDQDAGPGLLDFAVNVRHDTPPEWLRERLAARL--GDLAAYPSTEDER 61

Query: 91  PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR------PGF 144
            AR A+A    R       PD+V L  G  +       +LAR     L PR      P F
Sbjct: 62  RARAAVAARHGRT------PDEVLLLAGAAEG----FALLAR-----LRPRRAAVVHPSF 106

Query: 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQ 203
              EA    + + V    L P   + +D  AV   AD     LV+I NP NP   ++  +
Sbjct: 107 TEPEAALRAAGIPVHRVVLDPP--FRLDPAAVPDDAD-----LVVIGNPTNPTSVLHPAE 159

Query: 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFGSIVP-VLTLGSISKRWIVPG 261
            L  +       G +++ DE     AF +  P  P  + G  +P VL L S++K W + G
Sbjct: 160 QLLALRRP----GRILVVDE-----AFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAG 210

Query: 262 WRLGWLV 268
            R+G+ +
Sbjct: 211 LRVGYAL 217

Length = 349

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 17/161 (10%)

Query: 67  AVDAIVHSVRSARFNCY-SSTVGILPARRAIADYLNRDLPYKLSPDDVYLT-LGCTQAIE 124
           AV+AI   +     + Y       L  R A++ Y        +  +++ +   G  + I+
Sbjct: 52  AVEAIEKELSKI--HRYPEPDAPEL--REALSKYTG------VPVENIIVGGDGMDEVID 101

Query: 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184
            ++     PG  +++P P F YYE  A     +  +      + + +D+D+V     E T
Sbjct: 102 TLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVY--AKREEDFSLDVDSVLNAITEKT 159

Query: 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
             + +  P NP GN+   + ++KI E+   L   V  DE Y
Sbjct: 160 KVIFLCTPNNPTGNLIPEEDIRKILESTDAL---VFVDEAY 197

Length = 361

>gnl|CDD|216367 pfam01212, Beta_elim_lyase, Beta-eliminating lyase

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 11/113 (9%)

Query: 120 TQAIEVILTVLARPGANILLPRPGFPY-YEARATHSHLEVRHF-DLLPAKGWEVDLDAVE 177
           T A ++ L    R G  ++   P   Y  E    H+ L       L  A+  ++DL+ +E
Sbjct: 57  TMANQLALMAHCRRGDEVICGEPAHIYFDETGG-HAELGGAQPVPLPGAEAGKLDLEDLE 115

Query: 178 ALADE-------NTVALVIINPGN-PCGNVYTYQHLQKIAETAKKLGIMVIAD 222
           A            T  + + N  N   G V + + L++I   A++ GI +  D
Sbjct: 116 AAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAIAREHGIPLHLD 168

Length = 288

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score = 47.2 bits (113), Expect = 5e-06
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 21/140 (15%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---PGANILLPRPG----- 143
           AR  +A+++N       S +++  T G T+AI ++   L R   PG  IL+         
Sbjct: 48  AREKVAEFINAP-----SDEEIIFTSGTTEAINLVAISLGRSLKPGDEILVTEMEHHANL 102

Query: 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY-TY 202
            P+ E  A  +   VR   + P     +DLDA+E L    T  LV I   +   NV  T 
Sbjct: 103 VPWQEL-AKRTGATVRVIPVDP--NGLLDLDALEKLLTPRT-KLVAITHVS---NVTGTV 155

Query: 203 QHLQKIAETAKKLGIMVIAD 222
             +++I + A + G +V+ D
Sbjct: 156 NPVEEIGKLAHEYGALVVVD 175

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 47.2 bits (113), Expect = 5e-06
 Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 13/108 (12%)

Query: 122 AIEVILTVLARPGANILLPRP--GFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
           AI   L  L + G ++LLP    G  Y   E       +EV   D         D     
Sbjct: 90  AISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP------GDDEALEA 143

Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
           A+ + NT  + +  P NP   V     +  IA  AK  G +V+ D  +
Sbjct: 144 AIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTF 188

Length = 396

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 47.3 bits (113), Expect = 6e-06
 Identities = 50/204 (24%), Positives = 80/204 (39%), Gaps = 39/204 (19%)

Query: 96  IADYLNRDLPYKLSPD---DVYLTLGCTQAI-----EVILTVLARPGANILLPRPGF-PY 146
           +  YL +++     P    D++   G T A+      +    L + G  I L  P F PY
Sbjct: 138 VHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPY 197

Query: 147 YEARATHSHLEVRHFDLL----------PAKGWEVDLDAVEALADENTVALVIINPGNPC 196
            E       L    F+++              W+     +E L D +  AL ++NP NP 
Sbjct: 198 LEI----PELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPP 253

Query: 197 GNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL---TLG 251
               + + ++KI +        +M++ D+VY         FV    F S+   L   T+G
Sbjct: 254 SVAMSDESIEKIVDIVANDRPDLMILTDDVY-------GTFVDD--FRSLFAELPYNTIG 304

Query: 252 --SISKRWIVPGWRLGWLVTSDPN 273
             S SK +   GWRLG +     N
Sbjct: 305 VYSFSKYFGATGWRLGTIALHKDN 328

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|236009 PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 23/155 (14%)

Query: 126 ILTVLARP---GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE 182
           +LT   R       + L  P F  Y          V+   L   +        ++ L  +
Sbjct: 86  LLTWAGRELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQ 145

Query: 183 NTV--ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
            T    L++ NP NP G +++ + +  + E       +V+ DE     AF +  F+P   
Sbjct: 146 LTPNDGLLLNNPHNPTGKLWSREAILPLLEQFA----LVVVDE-----AFMD--FLPPDA 194

Query: 241 FGSIVPVLT-------LGSISKRWIVPGWRLGWLV 268
             S++P L        L S++K + +PG RLG+ +
Sbjct: 195 EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAI 229

Length = 360

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGA-NILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
           + P+ V ++ G  + IE+++     PG   IL   P +  Y   A    +E+R    L  
Sbjct: 72  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL-- 129

Query: 167 KGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
             W++DL A+    D   V +V + +P NP GN+   Q L+ + E  +   I V+ADE Y
Sbjct: 130 DNWQLDLPAIADNLDG--VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAI-VVADEAY 186

Length = 351

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 33/146 (22%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI---------------EVILTVLARPGAN 136
           AR A+A +LN D     S D++  T G T+A+               E++++ L    +N
Sbjct: 71  AREAVARFLNAD-----SSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHH-SN 124

Query: 137 ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196
           I+      P+ E        +VR   L       +DLDA+E L    T  + + +  N  
Sbjct: 125 IV------PWQELAKRTG-AKVRVIPLDDD--GLLDLDALEKLITPKTKLVALSHVSNVT 175

Query: 197 GNVYTYQHLQKIAETAKKLGIMVIAD 222
           G V     +++IAE A + G +V+ D
Sbjct: 176 GTV---NPVKEIAELAHEHGALVLVD 198

Length = 405

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 116 TLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
           TLG T A+ V    LAR  P A + +  P +P ++A    + LEV  +    A+   +D 
Sbjct: 100 TLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDF 159

Query: 174 DA-VEAL--ADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
           D  +  L  A E +V  V+++    NP G   T +  Q++A+  K+ G++   D  Y
Sbjct: 160 DGMLADLKTAPEGSV--VLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY 214

Length = 396

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R A+A+         L  +++ +  G  + I++++  +  PG  I+   P F  Y   A 
Sbjct: 92  RAALAEDSG------LESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAA 145

Query: 153 HSHLEVRHFDLLPAKGWEVDLDA-VEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
            +  EV      P   + +D+   VEA+       L + +P NP G++ +   L KI E 
Sbjct: 146 VNGAEVIKVPRTP--DFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILE- 202

Query: 212 AKKLGIMVIADEVY 225
              L I+V+ DE Y
Sbjct: 203 ---LPILVVLDEAY 213

Length = 380

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)

Query: 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
            KL  + + +T G T+A+  ++ +LA     +++PR  +  YE  A      +       
Sbjct: 50  SKLFGEPIVITAGITEALY-LIGILALRDRKVIIPRHTYGEYERVARFFAARII------ 102

Query: 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
            KG   D + +E L + N+V +   NP NP G  Y ++ L+ + +  +    ++I DE  
Sbjct: 103 -KG-PNDPEKLEELVERNSV-VFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDE-- 157

Query: 226 DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
              AF    FV          ++ L + +K + +PG R+G+
Sbjct: 158 ---AF--IDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGY 193

Length = 311

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 43.6 bits (103), Expect = 9e-05
 Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 23/241 (9%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIA-- 97
           KN +  +I LG GD +  P   +   A    V  + S   F  Y    G    R AIA  
Sbjct: 29  KNPSADIIRLGIGDTTQ-PLPASVIEAFHNAVDELASPETFRGYGPEQGYPFLREAIAEN 87

Query: 98  DYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY------EARA 151
           DY  R     + P++++++ G    +  + ++   P   + +  P +P Y        RA
Sbjct: 88  DYRGR-----IDPEEIFISDGAKCDVFRLQSLF-GPDNTVAVQDPVYPAYLDSNVMAGRA 141

Query: 152 THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV-IINPGNPCGNVYTYQHLQKIAE 210
                + R+  +        + + +  L +E  + ++ + +P NP G V T + L+++ +
Sbjct: 142 GVLDDDGRYSKITYLPCTA-ENNFIPELPEEPHIDIIYLCSPNNPTGTVLTKEQLKELVD 200

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---GSIVPVLTLGSISKRWIVPGWRLGWL 267
            A + G +++ D  Y   AF + P +P  +F   G+    +   S SK     G RLGW 
Sbjct: 201 YANEHGSLILFDAAYS--AFISDPSLPHSIFEIPGARFCAIEFRSFSKTAGFTGVRLGWT 258

Query: 268 V 268
           V
Sbjct: 259 V 259

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score = 43.2 bits (103), Expect = 1e-04
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 11/89 (12%)

Query: 137 ILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192
           +L+     P Y    +       +EV             DL+A+EA  D++T A+V+  P
Sbjct: 157 VLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGV---TDLEALEAAVDDDTAAVVVQYP 213

Query: 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIA 221
            N  G +   + L++IAE A   G + I 
Sbjct: 214 -NFFGVI---EDLEEIAEIAHAGGALFIV 238

Length = 447

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 21/145 (14%)

Query: 136 NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195
           NI++  P F  Y+  A    +       LP      +    E L + N   + I++P NP
Sbjct: 81  NIIIVEPNFNEYKGYAFTHGIR---ISALPFNLINNN---PEILNNYNFDLIFIVSPDNP 134

Query: 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV------LT 249
            GN+ +   L  I+E  +K G ++  DE     AF +  FVP       V +      + 
Sbjct: 135 LGNLISRDSLLTISEICRKKGALLFIDE-----AFID--FVP-NRAEEDVLLNRSYGNVI 186

Query: 250 LG-SISKRWIVPGWRLGWLVTSDPN 273
           +G S++K   +P  R+G++ T D N
Sbjct: 187 IGRSLTKILGIPSLRIGYIATDDYN 211

Length = 332

>gnl|CDD|99746 cd06453, SufS_like, Cysteine desulfurase (SufS)-like

 Score = 40.9 bits (97), Expect = 6e-04
 Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 33/146 (22%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI---------------EVILTVLARPGAN 136
           AR  +A ++N       SPD++  T   T+AI               E++ +V+    +N
Sbjct: 48  AREKVARFINAP-----SPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEH-HSN 101

Query: 137 ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196
           I+      P+ +        +++   +    G ++DL+A+E L  E T  + + +  N  
Sbjct: 102 IV------PWQQLAERTG-AKLKVVPVDD-DG-QLDLEALEKLLTERTKLVAVTHVSNVL 152

Query: 197 GNVYTYQHLQKIAETAKKLGIMVIAD 222
           G +     +++I E A + G+ V+ D
Sbjct: 153 GTI---NPVKEIGEIAHEAGVPVLVD 175

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine. Length = 373

>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family

 Score = 40.6 bits (96), Expect = 7e-04
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 165 PAKGWEVDLDAVEALADE--NTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVI 220
           P      DL+A+E   +E    VA VI+ P  G     V    +L+ + E  +K GI++I
Sbjct: 170 PPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLI 229

Query: 221 ADEV 224
           ADEV
Sbjct: 230 ADEV 233

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation. Length = 413

>gnl|CDD|225428 COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 9/66 (13%)

Query: 163 LLPAKGWEV------DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            L   G EV      D +  EA  DENT A+     GNP  +V     ++ IAE A + G
Sbjct: 121 TLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHG 177

Query: 217 IMVIAD 222
           + +I D
Sbjct: 178 VPLIVD 183

Length = 426

>gnl|CDD|166635 PLN02994, PLN02994, 1-aminocyclopropane-1-carboxylate synthase

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 88  GILPARRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP 145
           G+   R+AIA+++   R    K   D + L+ G T A E+I+  +A PG   L+P P + 
Sbjct: 93  GLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152

Length = 153

>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 15/61 (24%)

Query: 172 DLDAVEALADENTVALVI--------INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
           D++A+EA  DE+T A+++        + P  P       + L+ + E   + G ++I DE
Sbjct: 173 DIEALEAAIDEDTAAVIVEPIQGEGGVIPAPP-------EFLKALRELCDEHGALLILDE 225

Query: 224 V 224
           V
Sbjct: 226 V 226

Length = 404

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 23/160 (14%)

Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---TLGCTQAIEVILTVLARPGANILL 139
           Y+   GI   R    + + R+ P  LS   + L   T   T  + ++  +    G  +LL
Sbjct: 40  YAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLL 98

Query: 140 PRPGFPYYE-ARATHSHLEVRHFDLLPAKGWEVDLDA-VEAL--ADENTVALVIIN-PGN 194
           P   +  Y+    T    E+  + +    G   D DA  EAL  A      +VI+N P N
Sbjct: 99  PDHNWGNYKLTFNTRRGAEIVTYPIFDEDG-GFDTDALKEALQAAYNKGKVIVILNFPNN 157

Query: 195 PCGNVYT---------YQHLQKIAETAKKLGIMVIADEVY 225
           P G  YT          + ++++A+   K  ++ + D+ Y
Sbjct: 158 PTG--YTPTEKEATAIVEAIKELADAGTK--VVAVVDDAY 193

Length = 388

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 4/123 (3%)

Query: 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLL 164
           Y  +P+ + +  G  +AI++++  L  PG + +L+  P F  Y   A   +  +    L+
Sbjct: 72  YGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLV 131

Query: 165 P-AKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222
             A G+  D+ A+ A A  +   LV + +P NP G+      +++  +  +   ++V+ D
Sbjct: 132 DGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVV-D 190

Query: 223 EVY 225
           E Y
Sbjct: 191 EAY 193

Length = 364

>gnl|CDD|180392 PRK06084, PRK06084, O-acetylhomoserine aminocarboxypropyltransferase; Validated

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)

Query: 164 LPAKGWEV------DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217
           LP  G E       D+ A+EAL DE T A+   + GNP GN+     +Q +A+ A + G+
Sbjct: 118 LPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGV 174

Query: 218 MVIAD 222
            +I D
Sbjct: 175 PLIVD 179

Length = 425

>gnl|CDD|224919 COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism]

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 11/115 (9%)

Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY-YE--ARATHSHLEVRHFDLLPAKG 168
                   TQA ++ L    +PG +++       Y  E  A       +       P   
Sbjct: 52  AALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQKLPIV--PGAD 109

Query: 169 WEVDLDAVEALADEN------TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217
            ++  + VEA    +      T   V+ N     G VY    L+ I+   K+ G+
Sbjct: 110 GKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGL 164

Length = 342

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PLN02187	462	rooty/superroot1	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02656	409	tyrosine transaminase	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PLN02368	407	alanine transaminase	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK06855	433	aminotransferase; Validated	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK09148	405	aminotransferase; Validated	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK07683	387	aminotransferase A; Validated	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PLN02231	534	alanine transaminase	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK08175	395	aminotransferase; Validated	100.0
PRK07324	373	transaminase; Validated	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02397	423	aspartate transaminase	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.97
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.97
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.96
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.96
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.96
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.95
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.94
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.94
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.93
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.92
PRK07049	427	methionine gamma-lyase; Validated	99.91
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.91
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.91
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.91
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.91
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.91
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.9
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.9
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.9
PLN02242	418	methionine gamma-lyase	99.89
PLN02822	481	serine palmitoyltransferase	99.89
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.89
PRK06234	400	methionine gamma-lyase; Provisional	99.89
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.89
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.89
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.89
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.88
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.88
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.88
PRK10534	333	L-threonine aldolase; Provisional	99.88
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.88
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.88
PRK02627	396	acetylornithine aminotransferase; Provisional	99.88
PLN02721	353	threonine aldolase	99.88
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.88
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.88
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.88
PRK07179	407	hypothetical protein; Provisional	99.87
PRK13392	410	5-aminolevulinate synthase; Provisional	99.87
PRK08249	398	cystathionine gamma-synthase; Provisional	99.87
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.87
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.87
PRK08045	386	cystathionine gamma-synthase; Provisional	99.87
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.87
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.87
PRK07503	403	methionine gamma-lyase; Provisional	99.87
PRK08776	405	cystathionine gamma-synthase; Provisional	99.86
PRK07811	388	cystathionine gamma-synthase; Provisional	99.86
PRK02948	381	cysteine desulfurase; Provisional	99.86
PRK07050	394	cystathionine beta-lyase; Provisional	99.86
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.86
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.86
PLN02483	489	serine palmitoyltransferase	99.86
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.86
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.86
PRK08861	388	cystathionine gamma-synthase; Provisional	99.86
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.86
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.86
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.86
PRK06460	376	hypothetical protein; Provisional	99.86
PRK06767	386	methionine gamma-lyase; Provisional	99.85
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.85
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.85
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.85
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.85
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.85
PRK08574	385	cystathionine gamma-synthase; Provisional	99.85
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.85
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.84
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.84
PRK09028	394	cystathionine beta-lyase; Provisional	99.84
PRK09064	407	5-aminolevulinate synthase; Validated	99.84
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.84
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.84
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.83
PRK14012	404	cysteine desulfurase; Provisional	99.83
PLN02409	401	serine--glyoxylate aminotransaminase	99.83
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.83
PRK05939	397	hypothetical protein; Provisional	99.83
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.83
PRK07582	366	cystathionine gamma-lyase; Validated	99.82
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.82
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.82
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.82
PRK13393	406	5-aminolevulinate synthase; Provisional	99.82
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.82
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.82
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.82
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.81
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.81
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.81
PLN02651	364	cysteine desulfurase	99.81
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.81
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.81
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.8
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.8
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.8
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.8
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.8
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.8
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.8
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.79
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.79
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.79
PRK07671	377	cystathionine beta-lyase; Provisional	99.79
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.79
PRK05968	389	hypothetical protein; Provisional	99.79
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.79
PRK08064	390	cystathionine beta-lyase; Provisional	99.78
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.78
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.77
PRK05967	395	cystathionine beta-lyase; Provisional	99.77
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.77
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.77
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.77
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.76
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.76
PLN02509	464	cystathionine beta-lyase	99.76
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.76
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.76
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.76
PLN02955	476	8-amino-7-oxononanoate synthase	99.76
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.75
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.75
PRK07505	402	hypothetical protein; Provisional	99.75
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.75
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.74
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.74
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.72
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.72
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.71
PRK08114	395	cystathionine beta-lyase; Provisional	99.71
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.71
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.71
PRK04260	375	acetylornithine aminotransferase; Provisional	99.7
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.7
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.7
PRK04311	464	selenocysteine synthase; Provisional	99.7
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.7
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.69
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.66
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.66
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.66
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.66
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.65
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.65
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.65
PLN00144	382	acetylornithine transaminase	99.64
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.64
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.63
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.63
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.62
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.62
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.62
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.61
PLN02624	474	ornithine-delta-aminotransferase	99.61
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.61
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.6
PRK06434	384	cystathionine gamma-lyase; Validated	99.59
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.59
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.58
PRK02769	380	histidine decarboxylase; Provisional	99.57
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.57
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.55
PRK15029	755	arginine decarboxylase; Provisional	99.54
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.54
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.54
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.54
PRK13237	460	tyrosine phenol-lyase; Provisional	99.53
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.53
PLN03032	374	serine decarboxylase; Provisional	99.51
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.51
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.49
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.48
PLN02724	805	Molybdenum cofactor sulfurase	99.48
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.47
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.47
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.47
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.46
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.45
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.43
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.42
PRK13578	720	ornithine decarboxylase; Provisional	99.42
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.41
PLN02590	539	probable tyrosine decarboxylase	99.4
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.39
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.38
PLN02263	470	serine decarboxylase	99.38
PLN02880	490	tyrosine decarboxylase	99.37
PRK15400	714	lysine decarboxylase CadA; Provisional	99.35
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.34
PRK03080	378	phosphoserine aminotransferase; Provisional	99.34
PLN02271	586	serine hydroxymethyltransferase	99.34
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.32
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.32
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.31
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.31
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.31
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.3
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.3
PRK06541	460	hypothetical protein; Provisional	99.29
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.28
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.26
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.26
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.25
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.24
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.24
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.24
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.22
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.22
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.22
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.21
PRK05367	954	glycine dehydrogenase; Provisional	99.21
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.17
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.17
PRK07482	461	hypothetical protein; Provisional	99.15
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.15
PRK05965	459	hypothetical protein; Provisional	99.14
PRK07678	451	aminotransferase; Validated	99.14
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.14
PRK12403	460	putative aminotransferase; Provisional	99.14
PRK06105	460	aminotransferase; Provisional	99.13
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.13
PRK07046	453	aminotransferase; Validated	99.11
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.09
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.09
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.09
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.09
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.08
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.08
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.06
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.06
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.05
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.05
PRK12566	954	glycine dehydrogenase; Provisional	99.03
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.03
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.03
PRK06149	972	hypothetical protein; Provisional	99.02
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.02
PRK07036	466	hypothetical protein; Provisional	99.01
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.01
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.0
PRK06917	447	hypothetical protein; Provisional	99.0
COG4100	416	Cystathionine beta-lyase family protein involved i	98.99
PRK07481	449	hypothetical protein; Provisional	98.99
PRK07480	456	putative aminotransferase; Validated	98.98
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	98.98
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	98.97
PRK07483	443	hypothetical protein; Provisional	98.97
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	98.96
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.96
PRK06062	451	hypothetical protein; Provisional	98.95
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	98.95
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.94
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	98.93
PRK06148	1013	hypothetical protein; Provisional	98.92
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	98.88
PLN02452	365	phosphoserine transaminase	98.84
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	98.83
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	98.83
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	98.8
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	98.78
PRK05367	954	glycine dehydrogenase; Provisional	98.77
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	98.77
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.71
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	98.62
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.62
COG3844	407	Kynureninase [Amino acid transport and metabolism]	98.6
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.58
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.56
PRK12462	364	phosphoserine aminotransferase; Provisional	98.56
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	98.55
PRK08297	443	L-lysine aminotransferase; Provisional	98.53
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	98.53
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	98.41
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	98.27
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.24
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.2
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.2
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.14
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	97.93
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	97.85
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	97.6
PLN02672	1082	methionine S-methyltransferase	97.58
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	97.49
PRK12566	954	glycine dehydrogenase; Provisional	97.08
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	96.73
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	96.34
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	96.2
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	95.12
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	94.42
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	89.49
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	88.32
COG2102	223	Predicted ATPases of PP-loop superfamily [General	87.97
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	83.73
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	83.42

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.2e-50  Score=346.42  Aligned_cols=301  Identities=61%  Similarity=1.064  Sum_probs=286.1

Q ss_pred             CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcC
Q 020968            9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG   88 (319)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g   88 (319)
                      ..-|+|+.|+..++.+...||.+...++......+...+|.|++|||+.|+++++.+...+|+.++++++.+++|+|+.|
T Consensus        25 ~~~W~f~gs~~a~ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G  104 (447)
T KOG0259|consen   25 HSVWRFKGSDAAKKAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVG  104 (447)
T ss_pred             ccceeeccchhhhhhccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccc
Confidence            34499999999988888999999998887776666678999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG  168 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  168 (319)
                      ....|+++|+|+++...-.+.+++|++|+|.++||..++.++.++|..|++|.|+|+.|...+...|+++.++++.++.+
T Consensus       105 ~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~  184 (447)
T KOG0259|consen  105 ILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKD  184 (447)
T ss_pred             cHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCccc
Confidence            99999999999988777788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeE
Q 020968          169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL  248 (319)
Q Consensus       169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi  248 (319)
                      |.+|++.+|.++++++.++++.||+||+|.+|+.+-+++|+++|++++++||.||+|.++.|++.++.++..+...-+||
T Consensus       185 weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVi  264 (447)
T KOG0259|consen  185 WEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVI  264 (447)
T ss_pred             ceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988999


Q ss_pred             EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      .++|+||.|..||||+||++..++.+.+.+...++.++.+.+...+++++.|.|+-.+|-+
T Consensus       265 tlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~k  325 (447)
T KOG0259|consen  265 TLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEK  325 (447)
T ss_pred             eecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHh
Confidence            9999999999999999999999999999998888999999988889999999999997654

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=1.9e-48  Score=363.18  Aligned_cols=309  Identities=66%  Similarity=1.171  Sum_probs=265.6

Q ss_pred             CCCCCCCC-----CCCCCCCchHH-HHhcccccHHHHHHHHHHHhhhcC-CCCeEeccCCCCCCCCCCCCcHHHHHHHHH
Q 020968            1 MENGGGAN-----GNQWGFKANEE-LKTASGITVRGVLNSLLENLNKND-TRPLIPLGHGDPSAFPSFRTASVAVDAIVH   73 (319)
Q Consensus         1 ~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~   73 (319)
                      |+++++..     ..-|.|+.|.. +.......+|.++..+.+.++... +.++|+|++|+|+.++.+++++.+.+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~   80 (430)
T PLN00145          1 MEGGGGGGGGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAA   80 (430)
T ss_pred             CCCCCCCCCCCCccccccccCchhhHHHhcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            88888774     58999999985 555555678888877777776553 779999999999988889999999999999


Q ss_pred             HhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh
Q 020968           74 SVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH  153 (319)
Q Consensus        74 ~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~  153 (319)
                      .+.....+.|++..|.+++|+++++++++.+|..+++++|++|+|+++||.+++.++.++||+|++++|+|+.|...+..
T Consensus        81 al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~  160 (430)
T PLN00145         81 ALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVF  160 (430)
T ss_pred             HHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH
Confidence            88776666899988999999999999998888889999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC
Q 020968          154 SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT  233 (319)
Q Consensus       154 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~  233 (319)
                      .|++++.+++.++++|.+|++.++++++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++.
T Consensus       161 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~  240 (430)
T PLN00145        161 SGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK  240 (430)
T ss_pred             cCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC
Confidence            99999999987777899999999999988899999999999999999999999999999999999999999999998776


Q ss_pred             CCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          234 PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       234 ~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      .+.++..+....++|+++||||.|++||||+||+++++++......++++.++.+.....+++.+.|.++..++.+
T Consensus       241 ~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~  316 (430)
T PLN00145        241 PFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIAN  316 (430)
T ss_pred             CccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence            6666666666678999999999999999999999986554222112234455555555456789999999886543

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=6.3e-48  Score=353.75  Aligned_cols=275  Identities=25%  Similarity=0.459  Sum_probs=239.1

Q ss_pred             ccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhh
Q 020968           24 SGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRD  103 (319)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~  103 (319)
                      .++.+........+..+.....++|+|++|+|+    +++|+.+.+++.+++..+.. .|.+..|.++||+++++++.+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~   81 (393)
T COG0436           7 LPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRR   81 (393)
T ss_pred             CcchhHHHHhHHHHHHHhcCCCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHH
Confidence            344455555433232222222689999999987    79999999999999887644 6779999999999999999999


Q ss_pred             CCCCCCCCc-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHHHHhhhc
Q 020968          104 LPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAVEALAD  181 (319)
Q Consensus       104 ~g~~~~~~~-i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~  181 (319)
                      +|..+++++ |++|+|+++|+..++.+++++||+|++++|.|+.|.......|.+++.+++..+ ++|.+|++.|+++++
T Consensus        82 ~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~  161 (393)
T COG0436          82 YGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT  161 (393)
T ss_pred             hCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC
Confidence            998888877 999999999999999999999999999999999999999999999999998655 489999999999999


Q ss_pred             cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCC
Q 020968          182 ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVP  260 (319)
Q Consensus       182 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~  260 (319)
                      ++++++++++||||||.+++.+++++|+++|++||++||.||+|.++.|++..++++..+.+ .+++|.+.||||+|+++
T Consensus       162 ~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mt  241 (393)
T COG0436         162 PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMT  241 (393)
T ss_pred             ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccc
Confidence            99999999999999999999999999999999999999999999999999876666666655 47899999999999999


Q ss_pred             cceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhcc
Q 020968          261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKR  310 (319)
Q Consensus       261 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~  310 (319)
                      |||+||+++++       +++++.+.+.++ ...+++.+.|.++..++...
T Consensus       242 GwRvG~~v~~~-------~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~  285 (393)
T COG0436         242 GWRIGWVVGPP-------EELIAALRKLKSYLTSCAPTPAQYAAIAALNGP  285 (393)
T ss_pred             ccceeEeecCh-------HHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCc
Confidence            99999999974       258888886666 46689999999999966544

>PLN02187 rooty/superroot1

Probab=100.00  E-value=1.6e-47  Score=359.48  Aligned_cols=297  Identities=56%  Similarity=1.010  Sum_probs=258.0

Q ss_pred             CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcC
Q 020968            9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG   88 (319)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g   88 (319)
                      ...|.|+.|..++.....+||.+...+.+.+.+..+.++|+|++|+|+.++.+.+++.+.+++.+.+..+....|++..|
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G  109 (462)
T PLN02187         30 SSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAG  109 (462)
T ss_pred             ccccccCcchhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            34599999999988887899999988888777777889999999999987778889999999999887666668999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG  168 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  168 (319)
                      .++||+++|+++++.+|..+++++|++|+|++++|..++.+++++||.|++++|+|+.|...++..|++++.++..++++
T Consensus       110 ~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~  189 (462)
T PLN02187        110 ILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKE  189 (462)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccC
Confidence            99999999999998888889999999999999999999999999999999999999999999999999999999876677


Q ss_pred             CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeE
Q 020968          169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL  248 (319)
Q Consensus       169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi  248 (319)
                      |++|+++++++++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++.++.++..+....++|
T Consensus       190 ~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi  269 (462)
T PLN02187        190 WEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVL  269 (462)
T ss_pred             CccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEE
Confidence            99999999999888889999999999999999999999999999999999999999999998775555665565555799


Q ss_pred             EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHHh
Q 020968          249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l~  308 (319)
                      +++||||.|++||+|+||++++++....   ++++.+...+..   ..+++.+.|.+++.++.
T Consensus       270 ~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~  329 (462)
T PLN02187        270 TLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILE  329 (462)
T ss_pred             EEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence            9999999999999999999986543110   123455554442   23458999999998654

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=6.4e-45  Score=338.08  Aligned_cols=281  Identities=67%  Similarity=1.120  Sum_probs=237.3

Q ss_pred             HHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCC
Q 020968           28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK  107 (319)
Q Consensus        28 i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~  107 (319)
                      |+.....+++.+.+..++++|+|+.|+|+.+..+++++.+.+++.+.+......+|++..|.++||+++++++.+.+|..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~   94 (409)
T PLN00143         15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ   94 (409)
T ss_pred             HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence            55555556666667789999999999998666689999999999998877656689988999999999999999888888


Q ss_pred             CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      +++++|++|+|+++++..++++++++||.|+++.|+|..|...++..|.+++.++..++++|.+|+++++++++++++++
T Consensus        95 ~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~  174 (409)
T PLN00143         95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM  174 (409)
T ss_pred             CCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence            99999999999999999999999999999999999999999999999999999998666778999999999888888999


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      ++++||||||.+++.+++++|+++|++++++||+||+|.++.+++....++..+...+++|+++||||.|++||+|+||+
T Consensus       175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~  254 (409)
T PLN00143        175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL  254 (409)
T ss_pred             EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence            99999999999999999999999999999999999999999987655455555666678999999999999999999999


Q ss_pred             EeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          268 VTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      +++++.......+.++.++........++.+.|.+++.++.
T Consensus       255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~  295 (409)
T PLN00143        255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILE  295 (409)
T ss_pred             EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHh
Confidence            98654311100122344444443333457899999988554

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=8.5e-45  Score=337.41  Aligned_cols=281  Identities=67%  Similarity=1.133  Sum_probs=243.6

Q ss_pred             HHHHHHHHHHHh-hhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCC
Q 020968           28 VRGVLNSLLENL-NKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY  106 (319)
Q Consensus        28 i~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~  106 (319)
                      |+.++..+++.+ ++.++.++|+|+.|+|+..+.+++++.+.+++.+.+.......|++..|.+++|+++++++++.+|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~   92 (409)
T PLN02656         13 IKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY   92 (409)
T ss_pred             hhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence            777777666665 4457789999999999866668899999999999887766678999899999999999999988888


Q ss_pred             CCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceE
Q 020968          107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA  186 (319)
Q Consensus       107 ~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  186 (319)
                      .+++++|++|+|+++|+..++.+++++||+|++++|+|+.+...++..|++++.+++.++++|.+|++.+++.+++++++
T Consensus        93 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~  172 (409)
T PLN02656         93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA  172 (409)
T ss_pred             CCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence            89999999999999999999999999999999999999999888899999999999876667899999999998888899


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      +++++|+||||.+++.+++++|+++|++++++||+|++|.++.+++..+.++..+....++|+++||||.|++||+|+||
T Consensus       173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~  252 (409)
T PLN02656        173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW  252 (409)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence            99999999999999999999999999999999999999999998876555655565667899999999999999999999


Q ss_pred             EEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       267 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ++++++.....+++++++++.......+++.+.|.+++.++.
T Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~  294 (409)
T PLN02656        253 FVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILE  294 (409)
T ss_pred             EEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHh
Confidence            999754322222458888877666545678999999998554

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=2.1e-43  Score=336.70  Aligned_cols=290  Identities=23%  Similarity=0.428  Sum_probs=240.9

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP   91 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (319)
                      |-++.|++++.+..+.++.+.....+ + +..+.++|+|+.|+|+.+ .+++|+.+.+++.+.+..  ..+|++..|..+
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~  189 (517)
T PRK13355        115 RTFKKSHKLDNVLYDVRGPVVDEANR-M-EAAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLFS  189 (517)
T ss_pred             cCCChhHHhhccCccHHHHHHHHHHH-H-HHcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChHH
Confidence            66778999999998877666654433 3 345789999999998642 267799999999887754  347999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      ||+++++++.+..+..+++++|++|+|+++++.+++.+++++||+|+++.|+|+.|...++..|.+++.++.+++++|.+
T Consensus       190 lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~  269 (517)
T PRK13355        190 ARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYP  269 (517)
T ss_pred             HHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCC
Confidence            99999999987666568999999999999999999999999999999999999999999999999999999877778999


Q ss_pred             CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      |++++++++.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.++..+++++
T Consensus       270 d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~  349 (517)
T PRK13355        270 DIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFS  349 (517)
T ss_pred             CHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEe
Confidence            99999999988899999999999999999999999999999999999999999999998876666666665544578889


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ||||+|+++|+|+||++++.+....  ..+++.+........+++.++|.++..++.
T Consensus       350 S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~  404 (517)
T PRK13355        350 GLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALG  404 (517)
T ss_pred             cchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhc
Confidence            9999999999999999975422000  123444444444334678899999888653

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=7.1e-43  Score=324.48  Aligned_cols=280  Identities=25%  Similarity=0.442  Sum_probs=240.0

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP   91 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (319)
                      -.++++.+++.+..+.++.+.....       ..++|+|+.|.|+    +++++.+.+++.+.+... ..+|++..|.++
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~   95 (413)
T PLN00175         28 QPLQVAKRLEKFKTTIFTQMSSLAI-------KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPE   95 (413)
T ss_pred             cccchhHHhhcCCCCHHHHHHHHhh-------cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHH
Confidence            3466788888888888877665432       4589999999987    577889999999888763 458999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968           92 ARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE  170 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  170 (319)
                      ||+++++++++.+|..++++ +|++|+|+++|+..++.+++++||+|++++|+|..|...++..|.+++.++++++ ++.
T Consensus        96 Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~  174 (413)
T PLN00175         96 LNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFA  174 (413)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCC
Confidence            99999999998888888887 7999999999999999999999999999999999999999999999999998654 378


Q ss_pred             CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEE
Q 020968          171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLT  249 (319)
Q Consensus       171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~  249 (319)
                      +|++.+++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++. +.++.++.. .+++|+
T Consensus       175 ~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~  253 (413)
T PLN00175        175 VPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVT  253 (413)
T ss_pred             CCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEE
Confidence            999999999988899999999999999999999999999999999999999999999988653 335545443 578999


Q ss_pred             EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhccccc
Q 020968          250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      ++||||.|++||+|+||++++.        ++++.+..... ...+++.+.|.+++.++...+.|
T Consensus       254 i~SfSK~~~~~G~RiG~~v~~~--------~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~  310 (413)
T PLN00175        254 MNSLGKTFSLTGWKIGWAIAPP--------HLTWGVRQAHSFLTFATATPMQWAAVAALRAPESY  310 (413)
T ss_pred             EecchhhccCcchheeeeEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHH
Confidence            9999999999999999999864        57888877765 35678999999999855443333

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=5.4e-43  Score=323.61  Aligned_cols=287  Identities=22%  Similarity=0.343  Sum_probs=237.8

Q ss_pred             CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHH
Q 020968           14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPAR   93 (319)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr   93 (319)
                      ++.|++++...++.++.+.+.+.+.  ...++++++|+.|+|+    +++++.+.+++.+.+.......|++..|.++||
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   76 (389)
T PRK08068          3 FEPSELLKQLPKQFFASLVAKVNKK--VAEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLK   76 (389)
T ss_pred             CchhhHhhhcCccHHHHHHHHHHHH--HhcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHH
Confidence            4567777777777777665543222  2245689999999987    566788899998887665556899889999999


Q ss_pred             HHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968           94 RAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD  172 (319)
Q Consensus        94 ~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  172 (319)
                      +++++++.+.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+++.++.+|
T Consensus        77 ~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d  156 (389)
T PRK08068         77 EAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPD  156 (389)
T ss_pred             HHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCC
Confidence            999999988888888888 8999999999999999999999999999999999999999999999999998766678899


Q ss_pred             HHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc-cCCCCCeEEEe
Q 020968          173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV-FGSIVPVLTLG  251 (319)
Q Consensus       173 ~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~vi~~~  251 (319)
                      ++++++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++..+.++.. ....+++++++
T Consensus       157 ~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~  236 (389)
T PRK08068        157 YTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELY  236 (389)
T ss_pred             HHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEe
Confidence            99999988778899999999999999999999999999999999999999999998887643334322 23345789999


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ||||.|++||+|+||++++.        +++++++..... ..+.+++.|.+++.++.+++.+.
T Consensus       237 S~SK~~g~~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  292 (389)
T PRK08068        237 TLSKTFNMAGWRVAFAVGNE--------SVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCV  292 (389)
T ss_pred             cchhccCCccceeEeEecCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHH
Confidence            99999999999999999743        588888877654 34556678888887666544443

>PLN02368 alanine transaminase

Probab=100.00  E-value=1.9e-43  Score=326.08  Aligned_cols=286  Identities=23%  Similarity=0.386  Sum_probs=231.5

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCC-------CC-------------------CCCCcHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-------FP-------------------SFRTASVAV   68 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-------~~-------------------~~~~~~~~~   68 (319)
                      .+|+++..+..+.++.+.....+ + +..+.++|+|++|+|+.       ++                   .+.+++.+.
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~a~~-~-~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~   87 (407)
T PLN02368         10 SLNENVKKCQYAVRGELYLRASE-L-QKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIA   87 (407)
T ss_pred             hcCHHHHhhhhhcCCHHHHHHHH-H-HHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHH
Confidence            45788888888877776554433 2 23467999999999861       10                   012566666


Q ss_pred             HHHHHHh-hcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcc
Q 020968           69 DAIVHSV-RSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPY  146 (319)
Q Consensus        69 ~a~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~~~p~~~~  146 (319)
                      +++.... .......|++..|.++||+++++++++.+|..+++++|++|+|+++++..++++++ ++||.|++++|+|+.
T Consensus        88 ~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~  167 (407)
T PLN02368         88 RAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL  167 (407)
T ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc
Confidence            6655422 22335689999999999999999999888988999999999999999999999987 799999999999999


Q ss_pred             hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968          147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI  220 (319)
Q Consensus       147 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  220 (319)
                      |...++..|.+++.++++.+++|++|++.+++.+++      +++++++++||||||.+++.+++++|+++|+++|++||
T Consensus       168 y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II  247 (407)
T PLN02368        168 YSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLL  247 (407)
T ss_pred             HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence            999999999999999988777899999999998864      57889999999999999999999999999999999999


Q ss_pred             EeCCCCCccCCCC-CCCCCccc----C----CCCCeEEEecCcccc-CCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          221 ADEVYDHLAFGNT-PFVPMGVF----G----SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       221 ~D~a~~~~~~~~~-~~~~~~~~----~----~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      +||+|.++.|++. ++.++..+    .    ..+++|+++||||+| ++||||+||+++.+-     .+++++++.....
T Consensus       248 ~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li~~~~~~~~  322 (407)
T PLN02368        248 GDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVEEIYKVAS  322 (407)
T ss_pred             EEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHHHHHHHHhc
Confidence            9999999998764 33443322    1    245899999999998 799999999985210     1358888877654


Q ss_pred             hcCCcchHHHHHHHHHH
Q 020968          291 ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       291 ~~~~~~~~~q~~~~~~l  307 (319)
                      ...+++.++|.++..++
T Consensus       323 ~~~~~~~~~Q~aa~~~l  339 (407)
T PLN02368        323 IALSPNVSGQIFMGLMV  339 (407)
T ss_pred             ccCCCCcHHHHHHHHHh
Confidence            44568899999998855

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-42  Score=321.93  Aligned_cols=284  Identities=20%  Similarity=0.301  Sum_probs=236.6

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++++.+...++.++.+.....+ . +..+.++++|+.|+|+    +++++.+.+++.+.+.......|+ ..|.++||++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~a   77 (399)
T PRK07681          5 LATRMKAFQSSIFSELGAYKKE-K-IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEA   77 (399)
T ss_pred             HhHHHhhcCccHHHHHHHHHHH-h-hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHH
Confidence            4566666666666666554322 1 2236789999999987    577889999998877553333555 4799999999


Q ss_pred             HHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++++++.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|.+++.++.+++++|.+|++
T Consensus        78 ia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~  157 (399)
T PRK07681         78 VTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLE  157 (399)
T ss_pred             HHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHH
Confidence            999999888988998 8999999999999999999999999999999999999999999999999999977777889999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI  253 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~  253 (319)
                      ++++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++..+.. .+++|+++||
T Consensus       158 ~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  237 (399)
T PRK07681        158 LIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSL  237 (399)
T ss_pred             HHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeec
Confidence            999888778899999999999999999999999999999999999999999999987665555555443 3679999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhcccccc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ||.|++||+|+||++++.        ++++++..... ...+++.+.|.++..++.....|.
T Consensus       238 SK~~~~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~  291 (399)
T PRK07681        238 SKSYSLAGSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFC  291 (399)
T ss_pred             ccccCCccceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHH
Confidence            999999999999999753        58888887765 345788999999988665443443

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.3e-42  Score=320.59  Aligned_cols=286  Identities=23%  Similarity=0.372  Sum_probs=235.6

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +++++.....+.+..+.+.+. .+ +..++++++|+.|+|+    +++++.+.+++.+.+......+|++..|.++||++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~   75 (383)
T TIGR03540         2 LADRIENLPPYLFAEIDKKKA-EK-KAEGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQA   75 (383)
T ss_pred             cchhhccCChhHHHHHHHHHH-HH-HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Confidence            355655555554444443332 22 2236799999999987    57788999999987765555689998899999999


Q ss_pred             HHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++++++.+|..++++ +|++|+|+++++..+++.++++||+|+++.|+|..+...++..|.+++.++.++++++.+|++
T Consensus        76 ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~  155 (383)
T TIGR03540        76 VADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFD  155 (383)
T ss_pred             HHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHH
Confidence            9999998888877776 699999999999999999999999999999999999999999999999999876667889999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI  253 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~  253 (319)
                      ++++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++..+.. .+++|+++||
T Consensus       156 ~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~Sf  235 (383)
T TIGR03540       156 AIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSL  235 (383)
T ss_pred             HHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEec
Confidence            999888888999999999999999999999999999999999999999999999887655566655543 3578999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhccccccc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      ||.|++||+|+||++++.        ++++++...... ..+++.+.|.++..++.+..+|.+
T Consensus       236 SK~~g~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~  290 (383)
T TIGR03540       236 SKTYNMTGWRIGMAVGNA--------DLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVK  290 (383)
T ss_pred             ccccCCccceeeEEeCCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHH
Confidence            999999999999999753        588888776653 456678899998886544345443

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=8.5e-43  Score=322.27  Aligned_cols=283  Identities=14%  Similarity=0.224  Sum_probs=229.0

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +.+++.++...+..+.. ..+.. +..+.++|+|+.|+++    +++++.+.+++.+.+......+|++..|.++||+++
T Consensus         4 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai   77 (388)
T PRK07366          4 AQRLQPLQSNVFADMDR-AKAQA-RAAGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAA   77 (388)
T ss_pred             hhhhhcCCccHHHHHHH-HHHHH-HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHH
Confidence            55666665554444433 22222 2346789999999976    677899999999887655456799889999999999


Q ss_pred             HHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        97 a~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      ++++.+.+|..++++ +|++|+|+++++.+++++++++||+|++++|+|..|...++..|++++.++.+.++++.+|+++
T Consensus        78 a~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  157 (388)
T PRK07366         78 AQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFAD  157 (388)
T ss_pred             HHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHH
Confidence            999998889889998 6999999999999999999999999999999999999999999999999999776778899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC-CCCCcccCCC-CCeEEEecC
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSI-VPVLTLGSI  253 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~-~~vi~~~s~  253 (319)
                      +++.+.++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++.. .+++..+... +++|+++||
T Consensus       158 l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf  237 (388)
T PRK07366        158 IPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTL  237 (388)
T ss_pred             HHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeec
Confidence            98877777899999999999999999999999999999999999999999999987643 4445555433 468999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCc-chHHHHHHHHHHhcccccc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDP-ATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~q~~~~~~l~~~~~~~  314 (319)
                      ||+|++||+|+||++++.        +++++++..... ..+. +.+.|.+++. +.++++|.
T Consensus       238 SK~~g~~GlRiG~~v~~~--------~li~~l~~~~~~~~~~~~~~~~~~a~~~-l~~~~~~l  291 (388)
T PRK07366        238 SKSYNMGGFRIGFAIGNA--------QLIQALRQVKAVVDFNQYRGILNGAIAA-LTGPQATV  291 (388)
T ss_pred             ccccCCcchhheehcCCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHH-HhCcHHHH
Confidence            999999999999999753        588888877664 2223 3344455444 54433343

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=3.5e-43  Score=308.50  Aligned_cols=247  Identities=28%  Similarity=0.464  Sum_probs=223.0

Q ss_pred             ccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHH
Q 020968           50 LGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILT  128 (319)
Q Consensus        50 l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~  128 (319)
                      |+.|.|+    +++|+-+.+++++.+.....++|.+..|+++|++++++.+...+|...+++ +|++|.|+.++|..++.
T Consensus        36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~  111 (420)
T KOG0257|consen   36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL  111 (420)
T ss_pred             ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence            9999987    899999999999999887778999999999999999999999787776665 69999999999999999


Q ss_pred             HhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc------CCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          129 VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL------PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       129 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +++++||+|++.+|.|+.|....+..|...+.++..      ..++|.+|.++++.++.+++++|++++||||||.++|+
T Consensus       112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR  191 (420)
T KOG0257|consen  112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR  191 (420)
T ss_pred             HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence            999999999999999999999999999999999987      45679999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      ++|++|+++|++||+++|.||+|..+.+++..+..+.++ +..+++|.++|++|+|++.|||+||++++.        .+
T Consensus       192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~L  263 (420)
T KOG0257|consen  192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------HL  263 (420)
T ss_pred             HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------Hh
Confidence            999999999999999999999999999999766665555 556799999999999999999999999943        47


Q ss_pred             HHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          282 VDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       282 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      ...++..++ .....+++.|.|.+.++-
T Consensus       264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~  291 (420)
T KOG0257|consen  264 YSALFPVHQNFVFTCPTPIQEASAAAFA  291 (420)
T ss_pred             hhhHHHHhhccccccCcHHHHHHHHHHh
Confidence            777776665 456778899999888653

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=2.8e-42  Score=320.12  Aligned_cols=292  Identities=40%  Similarity=0.758  Sum_probs=239.3

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP   91 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (319)
                      |+.+.|.+-+... .+++.+.....+.-  ..+.++++|+.|+|+....+++++.+.+++.+.+.......|++..|..+
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   77 (401)
T TIGR01264         1 WSVKPSDHSKNTV-NPIRAIVDNMKVKP--NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALS   77 (401)
T ss_pred             CCcChHHHHhhhh-hHHHHHHHHHHhhh--hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHH
Confidence            8888887766543 44777665443322  23468899999998643347889999999998877655567988899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      ||+++++++.+ .+..+++++|++|+|+++++.+++.+++++||+|+++.|+|..|...++..|++++.++++.++++++
T Consensus        78 lr~aia~~~~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~  156 (401)
T TIGR01264        78 AREAIASYYHN-PDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEI  156 (401)
T ss_pred             HHHHHHHHHhh-cCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCC
Confidence            99999999987 45568899999999999999999999999999999999999999999999999999998876667899


Q ss_pred             CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      |++.+++.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+....++|+++
T Consensus       157 d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~  236 (401)
T TIGR01264       157 DLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCG  236 (401)
T ss_pred             CHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEc
Confidence            99999998887889999999999999999999999999999999999999999999998775555666665555699999


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      ||||.|++||+|+||++++++....  .++++.++.......+++.+.|.+++.++.+
T Consensus       237 SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  292 (401)
T TIGR01264       237 GLAKRWLVPGWRLGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLR  292 (401)
T ss_pred             cCcccCCCccceEEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHh
Confidence            9999999999999999987532100  1244445444433346788999999885543

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=4.7e-42  Score=318.63  Aligned_cols=293  Identities=54%  Similarity=0.976  Sum_probs=245.6

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP   91 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (319)
                      |.|+-|.+.+.. ...|+.+.+.+.+..  ..+.++++|+.|+|+..+.+++++.+.+++.+.+.......|++..|..+
T Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~   77 (403)
T TIGR01265         1 WNFKGSDHAKKT-VNPIRAIVDNLKVKP--NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALA   77 (403)
T ss_pred             CCCchHHHHHHH-HHHHHHHHHHHHHHH--hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHH
Confidence            778888777653 357788777665432  23679999999999766678899999999998887655568988899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      +|++++++++...+..+++++|++|+|+++|+.+++++++++||+|++++|+|..+...++..|++++.++..+.+++.+
T Consensus        78 lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  157 (403)
T TIGR01265        78 AREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEI  157 (403)
T ss_pred             HHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCcc
Confidence            99999999988778888899999999999999999999999999999999999999999999999999998866667889


Q ss_pred             CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      |++.+++.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+++.+++....++..+....++|+++
T Consensus       158 d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~  237 (403)
T TIGR01265       158 DLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLG  237 (403)
T ss_pred             CHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEe
Confidence            99999999888889999999999999999999999999999999999999999999998775555666666656799999


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ||||.|++||+|+||++++++...+ ..++++.++........++.+.|.+++.++.
T Consensus       238 S~SK~~~~pGlRiG~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  293 (403)
T TIGR01265       238 GISKRWVVPGWRLGWIIIHDPHGIF-RDTVLQGLKNLLQRILGPATIVQGALPDILE  293 (403)
T ss_pred             ecccccCCCcceEEEEEEeCchhhh-HHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Confidence            9999999999999999986542111 0124444555544345678999999988654

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=4.6e-42  Score=319.50  Aligned_cols=287  Identities=33%  Similarity=0.602  Sum_probs=236.2

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      |.+..+ ...+++.+...+.+   ...++++|+|+.|+|+..+.+.+++.+.+++.+.+.......|++..|.++||+++
T Consensus         9 ~~~~~~-~~~~~~~~~~~~~~---~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~ai   84 (412)
T PTZ00433          9 SKHAGR-VFNPLRTVTDNAKP---SPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAV   84 (412)
T ss_pred             cHHHHh-hhccHHHHHHhhcc---CCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHH
Confidence            334444 33455555544432   23578999999999874344678899999999887765556899888999999999


Q ss_pred             HHHHhhhC------CCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968           97 ADYLNRDL------PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE  170 (319)
Q Consensus        97 a~~~~~~~------g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  170 (319)
                      ++++++.+      |..+++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++..|++++.++.+++++|+
T Consensus        85 a~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~  164 (412)
T PTZ00433         85 ATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWE  164 (412)
T ss_pred             HHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCc
Confidence            99998643      466889999999999999999999999999999999999999999999999999999987666789


Q ss_pred             CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      +|++++++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+....++|++
T Consensus       165 ~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~  244 (412)
T PTZ00433        165 ADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVIL  244 (412)
T ss_pred             CCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEE
Confidence            99999999888888999999999999999999999999999999999999999999999876554555556544568999


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      +||||.|++||+|+||++++++...  .+++++.++.......+++++.|.+++.++.+
T Consensus       245 ~SfSK~~~~pGlRlG~~i~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  301 (412)
T PTZ00433        245 GGTAKNLVVPGWRLGWLLLVDPHGN--GGDFLDGMKRLGMLVCGPCSVVQAALGEALLN  301 (412)
T ss_pred             ccchhhcCCCCeeEEEEEEeCCccc--HHHHHHHHHHHhhccCCCChHHHHHHHHHHhc
Confidence            9999999999999999998443211  12466777665554457899999999886654

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=2.1e-42  Score=323.25  Aligned_cols=263  Identities=25%  Similarity=0.370  Sum_probs=215.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+.++++|+.|+|+.+ .+++|+.+.+++.+.+......+|++..|.++||+++++++++.+|.++++++|++|+|++++
T Consensus        30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a  108 (433)
T PRK06855         30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA  108 (433)
T ss_pred             ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence            4678999999998532 378999999999988765555689999999999999999999988999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHH-HhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcCCCCccccc
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINPGNPCGNV  199 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~  199 (319)
                      +..++. ++++||.|++++|+|+.|... ....|.+++.++.+++++|.+|++++++++.  ++++++++++||||||.+
T Consensus       109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~  187 (433)
T PRK06855        109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV  187 (433)
T ss_pred             HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence            999985 788999999999999987654 3456888888888766788999999999886  356889999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                      +|.+++++|+++|+++|++||+||+|.++.|++..++++..+.++.++|+++||||.|++||+|+||+++++......-.
T Consensus       188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~  267 (433)
T PRK06855        188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK  267 (433)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence            99999999999999999999999999999987765566666544456899999999999999999999986421100001


Q ss_pred             HHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          280 GIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      .+++++........+++.+.|.+++.++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l  295 (433)
T PRK06855        268 KYINSILNAKMIEVCSTTLPQMAIPRIM  295 (433)
T ss_pred             HHHHHHHHhhccccCCChHHHHHHHHhh
Confidence            2333333333233457889999999844

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=6.7e-42  Score=316.02  Aligned_cols=285  Identities=23%  Similarity=0.362  Sum_probs=235.5

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +++++....++....+.... +.+. ..++++++|+.|+|+    +++++.+.+++.+.+.......|++..|.++||++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~a   77 (385)
T PRK09276          4 LADRIKNLPPYLFAEIDKKK-AEKI-ARGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKA   77 (385)
T ss_pred             hhhHhhhCCccHHHHHHHHH-HHHH-hcCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHH
Confidence            45666666666555544322 2221 236779999999987    57788999999988765545689998899999999


Q ss_pred             HHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++++++.+|..++++ +|++|+|+++++..++..++++||+|++++|+|..|...++..|.+++.++.+.+.++.+|++
T Consensus        78 ia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~  157 (385)
T PRK09276         78 VADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLD  157 (385)
T ss_pred             HHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHH
Confidence            9999998888888887 599999999999999999999999999999999999999999999999999876667889999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI  253 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~  253 (319)
                      ++++.+.++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++....++..+.. .+++|+++||
T Consensus       158 ~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  237 (385)
T PRK09276        158 AIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSL  237 (385)
T ss_pred             HHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecc
Confidence            999888878899999999999999999999999999999999999999999999887655556555543 3578999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ||.|++||+|+||++++.        ++++++...+.. ..+++.+.|.++..++.+.+.|.
T Consensus       238 SK~~g~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  291 (385)
T PRK09276        238 SKTYNMTGWRIGFAVGNA--------DLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVV  291 (385)
T ss_pred             hhhcCCcchhheeeeCCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHH
Confidence            999999999999999753        578888776653 44567788988888654434443

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=5.1e-42  Score=317.86  Aligned_cols=275  Identities=23%  Similarity=0.364  Sum_probs=230.2

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD   98 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   98 (319)
                      ++..++++.++.+...+. .+.+..+.++|+|+.|+|+    +++++.+.+++.+.+.  ....|++..|.++||+++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~   76 (396)
T PRK09147          4 RLDRLQPYPFEKLRALFA-GVTPPADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAA   76 (396)
T ss_pred             hhhcCCcchHHHHHHHHH-hhhhccCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHH
Confidence            456667777777665443 3334457899999999987    6778999999988764  24689998899999999999


Q ss_pred             HHhhhCCCC-CCCC-cEEEeCCHHHHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           99 YLNRDLPYK-LSPD-DVYLTLGCTQAIEVILTVLARP---GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        99 ~~~~~~g~~-~~~~-~i~~~~G~t~ai~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      ++.+.+|.. ++++ +|++|+|+++++..++++++++   ||.|+++.|+|..|...++..|.+++.++++++++|.+|+
T Consensus        77 ~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~  156 (396)
T PRK09147         77 WLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDF  156 (396)
T ss_pred             HHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCH
Confidence            999888887 8885 8999999999999999999999   8999999999999999999999999999997777889999


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCC-Ccc---cC--CCCC
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVP-MGV---FG--SIVP  246 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~-~~~---~~--~~~~  246 (319)
                      +.+++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++. ++.+ +..   ..  ..++
T Consensus       157 ~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (396)
T PRK09147        157 DAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKR  236 (396)
T ss_pred             HHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCcccccc
Confidence            999888777889999999999999999999999999999999999999999999988663 2211 111   11  2468


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      +|+++||||.|++||+|+||+++++        ++++++...... ..+++++.|.++...+.
T Consensus       237 vi~~~S~SK~~~~~GlRiG~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~  291 (396)
T PRK09147        237 LVVFHSLSKRSNVPGLRSGFVAGDA--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWN  291 (396)
T ss_pred             EEEEeccccccCCccceeeeecCCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence            9999999999999999999999863        577888776653 45678899988776553

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.9e-42  Score=316.99  Aligned_cols=276  Identities=22%  Similarity=0.296  Sum_probs=230.2

Q ss_pred             cccccHHHHHHHHHHHhhhcC-CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHh
Q 020968           23 ASGITVRGVLNSLLENLNKND-TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLN  101 (319)
Q Consensus        23 ~~~~~i~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~  101 (319)
                      .+..++|+-..-+.+.++... ..++++|+.|+|+.   +++++.+.+++.+.+.......|++..|.++||+++++++.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~   92 (405)
T PRK06207         16 APGQEVRQSAAGLEALLRGEPLPGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLA   92 (405)
T ss_pred             CCcHHHHhhhhhhhhhhcCCcCCCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHH
Confidence            344456654444444443332 55789999999872   36778888888888766555689988899999999999999


Q ss_pred             hhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc---CCCCCcCCHHHHH
Q 020968          102 RDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL---PAKGWEVDLDAVE  177 (319)
Q Consensus       102 ~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~d~~~l~  177 (319)
                      +.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+   .+.++++|+++++
T Consensus        93 ~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~  172 (405)
T PRK06207         93 AFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLE  172 (405)
T ss_pred             HHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHH
Confidence            988888888 899999999999999999999999999999999999999999999999999875   2346889999999


Q ss_pred             hhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccc
Q 020968          178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKR  256 (319)
Q Consensus       178 ~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~  256 (319)
                      ++++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++..+. ..+++|+++||||.
T Consensus       173 ~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~  252 (405)
T PRK06207        173 EAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKT  252 (405)
T ss_pred             HhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhh
Confidence            99888889999999999999999999999999999999999999999999998775555554443 34789999999999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~  309 (319)
                      |++||+|+||++++.        +++++++..... ..+.+.+.|.++..++.+
T Consensus       253 ~~lpGlRiG~ii~~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~  298 (405)
T PRK06207        253 ESLSGYRLGVAFGSP--------AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE  298 (405)
T ss_pred             ccCcccceEEEEcCH--------HHHHHHHHHHhHhccCCCHHHHHHHHHHHhC
Confidence            999999999999753        588888877654 445677899998885543

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.6e-42  Score=314.70  Aligned_cols=273  Identities=22%  Similarity=0.406  Sum_probs=230.1

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +.++.......++.+.....      ..+++++|+.|+|+    +++++.+.+++.+..... ...|++..|.++||+++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~i   75 (384)
T PRK06348          7 AKKYQQMEVNIMAEIATLAK------KFPDIIDLSLGDPD----LITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEI   75 (384)
T ss_pred             HHHHhcCCccHHHHHHHHHH------hcCCcEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHH
Confidence            55666666666777665432      13679999999987    566777777666554433 45899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968           97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV  176 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  176 (319)
                      ++++.+.+|..+++++|++|+|+++|+..++.+++++||+|+++.|+|..+...++..|.+++.++..++++|.+|++.+
T Consensus        76 a~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  155 (384)
T PRK06348         76 IKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKL  155 (384)
T ss_pred             HHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHH
Confidence            99999888989999999999999999999999999999999999999999999999999999998876666788999999


Q ss_pred             HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCcc
Q 020968          177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK  255 (319)
Q Consensus       177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK  255 (319)
                      ++.++++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++. ..++..+.. .+++|+++||||
T Consensus       156 ~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK  234 (384)
T PRK06348        156 EALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSK  234 (384)
T ss_pred             HHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchh
Confidence            999888889999999999999999999999999999999999999999999988653 334444432 468999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~  309 (319)
                      +|++||+|+||+++++        ++++.++..... ..+++++.|.+++.++..
T Consensus       235 ~~~l~GlRiG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  281 (384)
T PRK06348        235 DFAMTGWRIGYVIAPD--------YIIETAKIINEGICFSAPTISQRAAIYALKH  281 (384)
T ss_pred             ccCCccccceeeecCH--------HHHHHHHHHHHhccCCCCHHHHHHHHHHHhC
Confidence            9999999999999864        577888777653 456789999999886644

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-41  Score=315.51  Aligned_cols=284  Identities=20%  Similarity=0.336  Sum_probs=232.4

Q ss_pred             CCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCC
Q 020968           10 NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGI   89 (319)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~   89 (319)
                      ++|- .++.+++.+.+.....+.. ..+..+ ..+.++++|+.|+|+    +++++.+.+++.+.+.......|++..|.
T Consensus         3 ~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~-~~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~   75 (394)
T PRK05942          3 LDWI-TPADRLQALPPYVFARLDE-LKARAR-EQGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGT   75 (394)
T ss_pred             Cccc-chhhhhccCCCcHHHHHHH-HHHHHH-hcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCC
Confidence            4563 4466777766654433332 222222 235679999999976    45667777877776654445689998999


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968           90 LPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG  168 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  168 (319)
                      ++||+++++++++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.+++.++.+.+++
T Consensus        76 ~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~  155 (394)
T PRK05942         76 ASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPEND  155 (394)
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccC
Confidence            9999999999998778888888 489999999999999999999999999999999999888899999999999876677


Q ss_pred             CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCe
Q 020968          169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPV  247 (319)
Q Consensus       169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~v  247 (319)
                      |.+|++++++.+.++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++....++..+.. .+.+
T Consensus       156 ~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~  235 (394)
T PRK05942        156 WLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIG  235 (394)
T ss_pred             CccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccE
Confidence            899999999988888999999999999999999999999999999999999999999999887655555555543 3467


Q ss_pred             EEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       248 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      |+++||||.|++||+|+||++++.        +++++++..... ..+++.++|.++..++.
T Consensus       236 i~~~SfSK~~~~~GlRiG~i~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~  289 (394)
T PRK05942        236 VEFHTLSKTYNMAGWRVGFVVGNR--------HIIQGLRTLKTNLDYGIFSALQKAAETALQ  289 (394)
T ss_pred             EEEecchhccCChhhheeeeecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence            999999999999999999999753        588888877653 45678889998888653

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=2.7e-41  Score=312.08  Aligned_cols=276  Identities=22%  Similarity=0.349  Sum_probs=236.9

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      .++.+++++.++.++.+.....+.  ...++++++|+.|+|+    +++++.+.+++.+.+.... ..|++..|.+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~   76 (387)
T PRK08960          4 GYSRRSRDIEPFHVMALLARANEL--EAAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALRE   76 (387)
T ss_pred             chhhHHHhCCchHHHHHHHHHHHH--HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHH
Confidence            346778888888888887765433  1246789999999987    6789999999998876543 47988889999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      ++++++.+.+|..+++++|++|+|++++++.++.+++++||+|++++|+|+.+...++..|.+++.++.+.+++|.+|++
T Consensus        77 ~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  156 (387)
T PRK08960         77 AIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPA  156 (387)
T ss_pred             HHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHH
Confidence            99999998888889999999999999999999999999999999999999999999999999999999876667889999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                      .+++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++...  .+++|+++|||
T Consensus       157 ~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~S  233 (387)
T PRK08960        157 LVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFS  233 (387)
T ss_pred             HHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeecc
Confidence            99999888889999999999999999999999999999999999999999999888653 2333332  45799999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      |.|+++|+|+||+++++        +++++++.... ...+++.+.|.++..++.
T Consensus       234 K~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~  280 (387)
T PRK08960        234 KYFGMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFE  280 (387)
T ss_pred             cccCCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhh
Confidence            99999999999999864        57888877765 345678999999888553

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-41  Score=313.91  Aligned_cols=258  Identities=23%  Similarity=0.357  Sum_probs=218.9

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCCH
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK-LSPD-DVYLTLGC  119 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~-~i~~~~G~  119 (319)
                      .++.++++|+.|+|+    +.+++.+.+++.+.+.......|++ .|.++||+++++++++.+|.. ++++ +|++|+|+
T Consensus        41 ~~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs  115 (410)
T PRK06290         41 HPDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGS  115 (410)
T ss_pred             cCCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCH
Confidence            356679999999987    6778889999887765444456875 799999999999999888887 8886 79999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccc
Q 020968          120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV  199 (319)
Q Consensus       120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~  199 (319)
                      ++++..++.+++++||.|+++.|+|..|...++..|.+++.++.+.+++|.+|++.+++.+.++++++++++||||||.+
T Consensus       116 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v  195 (410)
T PRK06290        116 KPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAV  195 (410)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcC
Confidence            99999999999999999999999999999999999999999999877778899999999888788999999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                      +|.+++++|+++|++++++||+||+|.++.+++. +.++..+.. .+++|+++||||.|++||+|+||++++.       
T Consensus       196 ~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~-------  267 (410)
T PRK06290        196 ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE-------  267 (410)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH-------
Confidence            9999999999999999999999999999988653 334333332 3568999999999999999999999853       


Q ss_pred             hHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          279 SGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                       ++++.+...... ..+++.++|.++..++ +++.|.
T Consensus       268 -~l~~~l~~~~~~~~~~~~~~~q~aa~~~l-~~~~~~  302 (410)
T PRK06290        268 -LIVKAFATVKDNNDSGQFIAIQKAGIYAL-DHPEIT  302 (410)
T ss_pred             -HHHHHHHHHHhccccCCcHHHHHHHHHHh-hCcHHH
Confidence             578888777654 4455678999888744 333443

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.5e-41  Score=312.78  Aligned_cols=283  Identities=20%  Similarity=0.296  Sum_probs=228.8

Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      ++++++....+..+.... ..++. .+.++++|+.|+|+    .+.++.+.+++.+.+.......|++..|..+||++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia   81 (403)
T PRK08636          8 NKIKRLPKYVFAEVNELK-MAARR-AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAIC   81 (403)
T ss_pred             HHHHhCCccHHHHHHHHH-HHHHh-cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHH
Confidence            456777776666655533 22322 35789999999987    4456777777777665544578999899999999999


Q ss_pred             HHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968           98 DYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV  176 (319)
Q Consensus        98 ~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  176 (319)
                      +++++.+|+.++++ +|++|+|+++++..++++++++||.|++++|+|+.+...++..|++++.++.+.++++++|++.+
T Consensus        82 ~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  161 (403)
T PRK08636         82 NWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQF  161 (403)
T ss_pred             HHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhh
Confidence            99998888888887 79999999999999999999999999999999999999999999999999986555688998754


Q ss_pred             ----Hhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC-CCeE
Q 020968          177 ----EALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVL  248 (319)
Q Consensus       177 ----~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~-~~vi  248 (319)
                          +++++   .+++++++++||||||.++|.+++++|+++|++++++||+||+|+++.+++...+++..+... +++|
T Consensus       162 ~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i  241 (403)
T PRK08636        162 FENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAV  241 (403)
T ss_pred             hhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEE
Confidence                55553   467899999999999999999999999999999999999999999999876555566665432 4678


Q ss_pred             EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      +++||||.|++||+|+||++++.        ++++++...... ..+++.+.|.++..++...+.|.
T Consensus       242 ~~~S~SK~~~~~GlRiG~iv~~~--------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~  300 (403)
T PRK08636        242 ESYTLSKSYNMAGWRVGFVVGNK--------KLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCV  300 (403)
T ss_pred             EEEecccccCCccceeeeeeCCH--------HHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHH
Confidence            89999999999999999999753        578888776653 34667888988876443233443

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=5e-41  Score=311.78  Aligned_cols=282  Identities=23%  Similarity=0.353  Sum_probs=226.3

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD   98 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   98 (319)
                      ++..+..+.+..+.. ..+.++. .++++|+|+.|+|+    +++++.+.+++.+.+......+|++..|.++||+++++
T Consensus         6 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~   79 (405)
T PRK09148          6 RIRRLPPYVFEQVNR-LKAAARA-AGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAA   79 (405)
T ss_pred             hhhcCCccHHHHHHH-HHHHHHh-cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHH
Confidence            556666555555432 2222222 35789999999987    56788888988887655445689998999999999999


Q ss_pred             HHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHH
Q 020968           99 YLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE  177 (319)
Q Consensus        99 ~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  177 (319)
                      ++++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++.+.++++..++++..
T Consensus        80 ~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~  159 (405)
T PRK09148         80 YYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAV  159 (405)
T ss_pred             HHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHH
Confidence            9998778888887 899999999999999999999999999999999999999999999999999876555544555444


Q ss_pred             hhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccc
Q 020968          178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKR  256 (319)
Q Consensus       178 ~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~  256 (319)
                      +...++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++..+.++..+.. .+++|+++||||.
T Consensus       160 ~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~  239 (405)
T PRK09148        160 RHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKT  239 (405)
T ss_pred             hhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccc
Confidence            333457789999999999999999999999999999999999999999999887655445544432 3467899999999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      |++||+|+||++++.        ++++++...+.. ..+++.+.|.++..++.+.+.+.
T Consensus       240 ~~~pGlR~G~~v~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~  290 (405)
T PRK09148        240 FSMAGWRMGFAVGNE--------RLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCI  290 (405)
T ss_pred             cCCcchheeeeeCCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHH
Confidence            999999999999753        588888877763 45678899999988554333443

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=5.3e-41  Score=317.76  Aligned_cols=288  Identities=24%  Similarity=0.363  Sum_probs=231.7

Q ss_pred             CchHHHHhcccccHHHHHHHHH---HHhhhc----CCCCeEeccCCCCCCCC------------CCCC------------
Q 020968           15 KANEELKTASGITVRGVLNSLL---ENLNKN----DTRPLIPLGHGDPSAFP------------SFRT------------   63 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~---~~~~~~----~~~~~i~l~~g~~~~~~------------~~~~------------   63 (319)
                      .+|+++..+..+..+.+..+.+   +.+++.    ++.++|+|++|+|+...            .+..            
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~   88 (481)
T PTZ00377          9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL   88 (481)
T ss_pred             ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence            3577888888886666543333   323233    45799999999995100            0222            


Q ss_pred             -cHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEE
Q 020968           64 -ASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILL  139 (319)
Q Consensus        64 -~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~  139 (319)
                       |..+++++.+.+...  ....|++..|.++||+++++++.+.+|..+++++|++|+|+++++..++++++ ++||.|++
T Consensus        89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv  168 (481)
T PTZ00377         89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI  168 (481)
T ss_pred             CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence             457777777665542  34579999999999999999999888999999999999999999999999998 79999999


Q ss_pred             cCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHH
Q 020968          140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAK  213 (319)
Q Consensus       140 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~  213 (319)
                      +.|+|+.|...++..|.+++.++.+++++|.+|++++++++.+      +++++++++||||||.++|.+++++|+++|+
T Consensus       169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~  248 (481)
T PTZ00377        169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY  248 (481)
T ss_pred             CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence            9999999999999999999999988777899999999998864      6788999999999999999999999999999


Q ss_pred             HcCCEEEEeCCCCCccCCC-CCCCCCcc----cCC----CCCeEEEecCccc-cCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          214 KLGIMVIADEVYDHLAFGN-TPFVPMGV----FGS----IVPVLTLGSISKR-WIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       214 ~~~~~li~D~a~~~~~~~~-~~~~~~~~----~~~----~~~vi~~~s~sK~-~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++|++||+||+|.++.|++ .++.++..    +..    ..++|+++||||. +++||+|+||+++.+-     .+++++
T Consensus       249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~-----p~~li~  323 (481)
T PTZ00377        249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNI-----PPEVRE  323 (481)
T ss_pred             HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCC-----CHHHHH
Confidence            9999999999999998853 33444322    222    1368999999997 5889999999987320     135888


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHH
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++........+++.+.|.+++.++
T Consensus       324 ~l~~~~~~~~~~~~~~Q~a~~~~l  347 (481)
T PTZ00377        324 QIYKLASINLCSNVVGQLMTGLMC  347 (481)
T ss_pred             HHHHHhheecCCChHHHHHHHHHh
Confidence            888776544468899999998854

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=1.8e-40  Score=308.19  Aligned_cols=287  Identities=24%  Similarity=0.461  Sum_probs=231.6

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      +.|+++..+.++.+..+....+ .. +..+.++++|+.|+|+.++ +++++.+.+++.+.+..  ...|++..|.++||+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~l~~g~p~~~~-~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~   79 (404)
T PRK09265          5 EKSSKLENVCYDIRGPVLKEAK-RL-EEEGHKILKLNIGNPAPFG-FEAPDEILRDVIRNLPT--AQGYSDSKGLFSARK   79 (404)
T ss_pred             chhHHHHhcCcchhHHHHHHHH-HH-HHcCCCeEEecCCCCCcCC-CCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHH
Confidence            4566777777765555555443 33 4457799999999986432 56888898888876643  357999999999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      ++++++....+.++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.+.+++|.+|++
T Consensus        80 ~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~  159 (404)
T PRK09265         80 AIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLD  159 (404)
T ss_pred             HHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHH
Confidence            99999976444478899999999999999999999999999999999999999999999999998888765567889999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                      ++++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+....++|+++|||
T Consensus       160 ~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~S  239 (404)
T PRK09265        160 DIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLS  239 (404)
T ss_pred             HHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecch
Confidence            99999888889999999999999999999999999999999999999999999998765555665555555789999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      |.|++||+|+||++++.+...  .+.+++.++.......+++.+.|.++..++.
T Consensus       240 K~~~~pGlRiG~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  291 (404)
T PRK09265        240 KAYRVAGFRVGWMVLSGPKKH--AKGYIEGLDMLASMRLCANVPAQHAIQTALG  291 (404)
T ss_pred             hhccCcccceEEEEEeCchHH--HHHHHHHHHHHhccccCCCcHHHHHHHHHhc
Confidence            999999999999997533200  0123444433323345678899999888553

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-40  Score=308.92  Aligned_cols=285  Identities=21%  Similarity=0.344  Sum_probs=237.7

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      +++.|++...++....+...+.+. . ..++++++|+.|.|.    +++++.+.+++.+.+.... .+|++..|.++||+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~   77 (402)
T PRK06107          5 VPAARVSRIKPSPSTAAAARAREL-R-AAGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE-TKYTLVNGTPALRK   77 (402)
T ss_pred             hhhHHhhhcCccHHHHHHHHHHHH-H-hccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHH
Confidence            567777766665444444333222 1 236789999999987    5678889999998886543 57999999999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      ++++++++.+|..+++++|++|+|+++|+..++.+++++||+|++++|+|..|...+...+...+.++.+.+++|.+|++
T Consensus        78 ~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~  157 (402)
T PRK06107         78 AIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPE  157 (402)
T ss_pred             HHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHH
Confidence            99999998889888999999999999999999999999999999999999999988888888888888765567889999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc-CCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEe
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLG  251 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~  251 (319)
                      .+++.+.++++++++++|+||||.+++.+++++++++|+++ ++++|+||+|.++.|++.+.+++.....  .+++|+++
T Consensus       158 ~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~  237 (402)
T PRK06107        158 ALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTN  237 (402)
T ss_pred             HHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEe
Confidence            99999888889999999999999999999999999999998 9999999999999887755555555433  36899999


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ||||.|++||+|+||++++.        ++++++...... ..+++.+.|.+++.++.++..|.
T Consensus       238 S~SK~~~~pGlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~  293 (402)
T PRK06107        238 GVSKTYAMTGWRIGYAAGPA--------DLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFV  293 (402)
T ss_pred             ccchhhcCcccceeeeecCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHH
Confidence            99999999999999999853        588888887764 56789999999999664444443

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=3e-40  Score=304.66  Aligned_cols=252  Identities=21%  Similarity=0.421  Sum_probs=218.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~a  122 (319)
                      ..++|+|+.|+|+    +++++.+.+++.+.+... ...|++..|.++||+++++++++.+|..+++ ++|++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a  102 (384)
T PRK12414         28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG  102 (384)
T ss_pred             hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence            4679999999987    577899999998877643 3589998999999999999999888877665 689999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +..++++++++||+|+++.|+|..+...++..|.+++.++.++ +++.+|++.+++.++++++++++++||||||.+++.
T Consensus       103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~  181 (384)
T PRK12414        103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA  181 (384)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999998754 457899999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      +++++|+++|+++++++|+||+|.++.|++....++..+.. .+++|+++||||.|++||+|+||+++++        ++
T Consensus       182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~l  253 (384)
T PRK12414        182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------EL  253 (384)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------HH
Confidence            99999999999999999999999999987655445544432 4589999999999999999999999864        57


Q ss_pred             HHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          282 VDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       282 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      ++++..... ...+++.+.|.+++.++.+
T Consensus       254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~  282 (384)
T PRK12414        254 MDEIRKVHQFMVFSADTPMQHAFAEALAE  282 (384)
T ss_pred             HHHHHHHHhheecCCCcHHHHHHHHHhcC
Confidence            888887765 3457789999999885544

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=3.2e-40  Score=304.93  Aligned_cols=278  Identities=23%  Similarity=0.284  Sum_probs=234.4

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++++++...+..++++.+.+.+ .. ..+.+.++|+.|+|+    +++++.+.+++.+.+.......|++..|.++||++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~   75 (386)
T PRK07550          2 LNPLIAALFPPPIPEVRAWLAG-YD-GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREA   75 (386)
T ss_pred             cchhhhhcCChHHHHHHHHHHH-Hh-hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHH
Confidence            3556666777788888876532 22 346679999999987    46688899998887655445689888899999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+++.++.+|++.
T Consensus        76 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~  155 (386)
T PRK07550         76 YAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAA  155 (386)
T ss_pred             HHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHH
Confidence            99999998898899999999999999999999999999999999999999999999999999999998766678899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSIS  254 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~s  254 (319)
                      ++++++++++++++++||||||.+++.+++++|+++|+++|++||+|++|+++.+++....++... ...+++++++|||
T Consensus       156 l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S  235 (386)
T PRK07550        156 AEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFS  235 (386)
T ss_pred             HHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecch
Confidence            999998888999999999999999999999999999999999999999999987654333333222 2346799999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      |.|++||+|+||+++++        +++++++..... ..+++.+.|.+++.++
T Consensus       236 K~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l  281 (386)
T PRK07550        236 KSYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGL  281 (386)
T ss_pred             hhccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHh
Confidence            99999999999999854        477777776653 4567899999988855

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=6.4e-40  Score=302.79  Aligned_cols=274  Identities=23%  Similarity=0.439  Sum_probs=232.7

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++.++++...+.++.++..+.      ..+++++|+.|.|+    +++++.+.+++.+.+... ...|++..|.++||++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~   73 (387)
T PRK07683          5 INPRVKDIQISGIRQFSNMVQ------NYDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKA   73 (387)
T ss_pred             hhHHHHhCCccHHHHHHHHHH------hcCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence            366788888888888776542      24688999999976    567788999999887654 3589988999999999


Q ss_pred             HHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++++.+.+|..++++ +|++|+|+++|+.+++++++++||+|+++.|+|..|...++..|++++.++.+. +++.+|.+
T Consensus        74 ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~  152 (387)
T PRK07683         74 ACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAE  152 (387)
T ss_pred             HHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHH
Confidence            9999998888888898 999999999999999999999999999999999999999999999999998753 56788999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecC
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSI  253 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~  253 (319)
                      .+++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++..+ +..+++|+++||
T Consensus       153 ~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~  231 (387)
T PRK07683        153 ALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGL  231 (387)
T ss_pred             HHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeec
Confidence            99999888889999999999999999999999999999999999999999999988653 3344444 234689999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKR  310 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~  310 (319)
                      ||.|++||+|+||++++.        ++++++...... ..+++.+.|.++..++.+.
T Consensus       232 SK~~~~pGlRiG~i~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~  281 (387)
T PRK07683        232 SKSHSMTGWRIGFLFAPS--------YLAKHILKVHQYNVTCASSISQYAALEALTAG  281 (387)
T ss_pred             cccccCccceeEEEEcCH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHhCC
Confidence            999999999999999863        578887766543 3456788999998855443

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.5e-40  Score=306.23  Aligned_cols=273  Identities=23%  Similarity=0.398  Sum_probs=224.9

Q ss_pred             HHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHH
Q 020968           20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADY   99 (319)
Q Consensus        20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   99 (319)
                      ++.++.+.++.+...+. ......+.++++|+.|+|+    +++++.+.+++.+.+.  ....|++..|.++||++++++
T Consensus         4 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~   76 (393)
T TIGR03538         4 LSRLQPYPFEKLAALLA-GVTPPASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARW   76 (393)
T ss_pred             hhhCCccHHHHHHHHHH-hhhhhcCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHH
Confidence            34455555655554432 2222346899999999987    6788999999998764  246899999999999999999


Q ss_pred             HhhhCCCC--CCCC-cEEEeCCHHHHHHHHHHHhcCCCCE--EEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968          100 LNRDLPYK--LSPD-DVYLTLGCTQAIEVILTVLARPGAN--ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus       100 ~~~~~g~~--~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++.+|..  ++++ +|++|+|+++++..++++++++||.  |+++.|+|..|...++..|++++.++++++++|.+|.+
T Consensus        77 ~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  156 (393)
T TIGR03538        77 LERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFD  156 (393)
T ss_pred             HHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHH
Confidence            98877765  6775 7999999999999999999999986  99999999999999999999999999876777899999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCC-cc---c--CCCCCe
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPM-GV---F--GSIVPV  247 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~-~~---~--~~~~~v  247 (319)
                      ++++++.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .+.+. ..   .  ...+++
T Consensus       157 ~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  236 (393)
T TIGR03538       157 AVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRC  236 (393)
T ss_pred             HHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccE
Confidence            99988877889999999999999999999999999999999999999999999987642 22221 11   1  134689


Q ss_pred             EEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       248 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      |+++||||.|++||+|+||++++.        ++++++...... ..+++.+.|.++...+
T Consensus       237 i~i~S~SK~~~~~GlRvG~~i~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l  289 (393)
T TIGR03538       237 LVFHSLSKRSNLPGLRSGFVAGDA--------EILKAFLRYRTYHGCAMPIPTQLASIAAW  289 (393)
T ss_pred             EEEecchhhcCCcccceEEEecCH--------HHHHHHHHHHHhhccCcCHHHHHHHHHHh
Confidence            999999999999999999999863        577888776653 4567889998877755

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-40  Score=304.51  Aligned_cols=276  Identities=22%  Similarity=0.406  Sum_probs=233.3

Q ss_pred             CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHH
Q 020968           14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPAR   93 (319)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr   93 (319)
                      +.+|.++.......++.+.....      ..+++|+|+.|+|+    +++++.+.+++.+.+... ...|.+..|.++||
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr   76 (391)
T PRK08361          8 YFIAGRINLIQRSKIRELFERAS------KMENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELR   76 (391)
T ss_pred             cchhHHHHhCCccHHHHHHHHHH------hhcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHH
Confidence            34577777777667777654331      13679999999987    566889999998877654 34798888999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        94 ~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      +++++++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+++++|.+|+
T Consensus        77 ~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  156 (391)
T PRK08361         77 EAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDP  156 (391)
T ss_pred             HHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCH
Confidence            99999998888888999999999999999999999999999999999999999999999999999999987766788999


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecC
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI  253 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~  253 (319)
                      +.+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++....++.... .+++++++|+
T Consensus       157 ~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~  235 (391)
T PRK08361        157 DELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSF  235 (391)
T ss_pred             HHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecC
Confidence            999999988889999999999999999999999999999999999999999999987654444444443 2579999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      ||.|+++|+|+||+++++        ++++++..... ...+++.+.|.++..++.+
T Consensus       236 SK~~~~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  284 (391)
T PRK08361        236 SKTFAMTGWRLGFVIAPE--------QVIKDMIKLHAYIIGNVASFVQIAGIEALRS  284 (391)
T ss_pred             chhcCCcHhhhhhhccCH--------HHHHHHHHHHhhhccCCChHHHHHHHHHhcC
Confidence            999999999999999853        47777766654 3456788999998885543

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=6e-40  Score=303.20  Aligned_cols=276  Identities=21%  Similarity=0.332  Sum_probs=227.7

Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      .++.....+.++.+.....       ..++++|+.|.|+    .+.++.+.+++.+.+... ..+|++..|.++||++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia   73 (387)
T PRK08912          6 PVFADLPTTIFEVMSQLAR-------EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVA   73 (387)
T ss_pred             HHHhhCCCCHHHHHHHHHh-------hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence            3455555555555444332       4689999999987    455677888887766543 458999999999999999


Q ss_pred             HHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968           98 DYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV  176 (319)
Q Consensus        98 ~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  176 (319)
                      +++++.+|..++++ +|++|+|+++++..++..++++||+|+++.|+|..+...++..|.+++.++.++ +++.+|++.+
T Consensus        74 ~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l  152 (387)
T PRK08912         74 AHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAAL  152 (387)
T ss_pred             HHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHH
Confidence            99998888888998 999999999999999999999999999999999999999999999999998753 4578999999


Q ss_pred             HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCcc
Q 020968          177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK  255 (319)
Q Consensus       177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK  255 (319)
                      ++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++....++..+.. .+++|+++|+||
T Consensus       153 ~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  232 (387)
T PRK08912        153 AAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGK  232 (387)
T ss_pred             HHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechh
Confidence            9998888899999999999999999999999999999999999999999999887644445444432 468999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      .|+++|+|+||++++.        ++++++...... ..+.++..|.+++..+...++|.
T Consensus       233 ~~g~~GlRiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  284 (387)
T PRK08912        233 IFSLTGWKVGFVCAAP--------PLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYF  284 (387)
T ss_pred             hccCcCceeEEEecCH--------HHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHH
Confidence            9999999999999853        577877776653 34567778888887665444443

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=1e-39  Score=301.80  Aligned_cols=275  Identities=24%  Similarity=0.412  Sum_probs=232.5

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++.++.....+.++.+..... .++ ..++++++|+.|+|+    +++++.+.+++.+.+... ...|++..|.++||++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~   75 (388)
T PRK07337          3 LAARVDAIEPFYVMELAKEAQ-ALE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREA   75 (388)
T ss_pred             hhhHhHhcCchHHHHHHHHHH-HHH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence            466777777777777665443 332 246789999999987    567888999998877643 4579988899999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++++.+|..+++++|++|+|+++|+..++.+++++||+|++++|+|..+...++..|.+++.++.+.+++|.+|+++
T Consensus        76 ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  155 (388)
T PRK07337         76 IAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAAD  155 (388)
T ss_pred             HHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHH
Confidence            99999988898899999999999999999999999999999999999999999999999999999998766678999999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++. +.+...  ..+++|+++|+||
T Consensus       156 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~--~~~~vi~~~S~SK  232 (388)
T PRK07337        156 VEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALS--LGDDVITINSFSK  232 (388)
T ss_pred             HHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhh--ccCCEEEEEechh
Confidence            9999988889999999999999999999999999999999999999999999887654 222222  2357899999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      .|++||+|+||+++++        ++++++..... ...+++.+.|.++..++.
T Consensus       233 ~~~~~G~RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~  278 (388)
T PRK07337        233 YFNMTGWRLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFE  278 (388)
T ss_pred             hcCCchhheeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhc
Confidence            9999999999999863        57888877765 345678999999888553

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.1e-40  Score=302.26  Aligned_cols=278  Identities=25%  Similarity=0.392  Sum_probs=231.0

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      |++++....+.++.+.....      ..+++++|+.|+|+    +++++.+.+++.+.+.... ..|++..|.++||+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~l   70 (382)
T PRK06108          2 RPAARALPESGIREVANAGR------GREGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREAL   70 (382)
T ss_pred             chhhhhCCchHHHHHHHHHh------ccCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHH
Confidence            44555666666666554332      23679999999987    6788999999998876643 4699989999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHH
Q 020968           97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDA  175 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~  175 (319)
                      ++++.+.+|..+++++|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.++.+.+ .+|.+|++.
T Consensus        71 a~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~  150 (382)
T PRK06108         71 ARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDR  150 (382)
T ss_pred             HHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHH
Confidence            9999988888889999999999999999999999999999999999999999999999999999998653 467899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCCCcccC-CCCCeEEEecC
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFG-SIVPVLTLGSI  253 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~~~~-~~~~vi~~~s~  253 (319)
                      +++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.++ +....++..+. ..+++++++||
T Consensus       151 l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  230 (382)
T PRK06108        151 LLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSF  230 (382)
T ss_pred             HHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeec
Confidence            99998888899999999999999999999999999999999999999999999886 33333333332 34689999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhccccc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      ||.|+++|+|+||++++.        +++++++..... ..+++.+.|.++..++.+.+.+
T Consensus       231 SK~~g~~G~RiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~  283 (382)
T PRK06108        231 SKNWAMTGWRLGWLVAPP--------ALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDF  283 (382)
T ss_pred             hhhccCcccceeeeeCCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHH
Confidence            999999999999999853        577877766543 4567899999888866443333

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-39  Score=300.06  Aligned_cols=278  Identities=22%  Similarity=0.334  Sum_probs=230.5

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +++++....++.+..+.....      ..+++++|+.|.|+    +++++.+.+++.+.+.......|++..|.+++|++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~   73 (389)
T PRK05957          4 FTSRMDAVQSPIIPVVGQLIR------ENPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEA   73 (389)
T ss_pred             hhHHHHhcCCcHHHHHHHHHH------hCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Confidence            466776666555554433221      13678999999987    67889999999887765444679998999999999


Q ss_pred             HHHHHhhhCCCCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           96 IADYLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~-~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++++.+..|..++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+  +++.+|++
T Consensus        74 ~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~  151 (389)
T PRK05957         74 ITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPE  151 (389)
T ss_pred             HHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHH
Confidence            99999988888777 7789999999999999999999999999999999999988889999999998874  45789999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecC
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSI  253 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~  253 (319)
                      +++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.+..+.... +...++|+++||
T Consensus       152 ~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  231 (389)
T PRK05957        152 AIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSL  231 (389)
T ss_pred             HHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecc
Confidence            9999998889999999999999999999999999999999999999999999998875443333333 444689999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhccccc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      ||.|++||+|+||+++++        +++++++..... ..+++.+.|.++..++.....|
T Consensus       232 SK~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  284 (389)
T PRK05957        232 SKAYGFASWRIGYMVIPI--------HLLEAIKKIQDTILICPPVVSQYAALGALQVGKSY  284 (389)
T ss_pred             hhhccCccceeEEEecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHH
Confidence            999999999999999853        588888877764 4567889999988855443333

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=5.1e-40  Score=303.41  Aligned_cols=277  Identities=20%  Similarity=0.318  Sum_probs=230.5

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +++++.+..+.++.+....       +..++|+|+.|.|+    +++++.+.+++.+.+... ...|++..|.+++|+++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~   76 (386)
T PRK09082          9 QSKLPNVGTTIFTVMSALA-------AEHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAI   76 (386)
T ss_pred             hhHhhccCccHHHHHHHHH-------hhCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHH
Confidence            3466666655444443322       24578999999987    567888999998877644 35799889999999999


Q ss_pred             HHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        97 a~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      ++++.+.+|...+++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.++.+. .++.+|+++
T Consensus        77 a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~  155 (386)
T PRK09082         77 AAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQR  155 (386)
T ss_pred             HHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHH
Confidence            999998888777775 899999999999999999999999999999999999999999999999999864 368899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSIS  254 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~s  254 (319)
                      +++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++.+..++..+.. .+++++++|||
T Consensus       156 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~S  235 (386)
T PRK09082        156 FAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFG  235 (386)
T ss_pred             HHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeech
Confidence            99999888899999999999999999999999999999999999999999999987655555555433 46899999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhcccccc
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      |.|++||+|+||+++++        ++++.++.... ...+++.+.|.+++.++...+.+.
T Consensus       236 K~~~~~G~RiG~iv~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  288 (386)
T PRK09082        236 KTYHVTGWKVGYCVAPA--------ALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHY  288 (386)
T ss_pred             hhccchhhhhhhhhCCH--------HHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHH
Confidence            99999999999999863        58888887765 345679999999888554344443

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=1.2e-39  Score=302.29  Aligned_cols=286  Identities=28%  Similarity=0.498  Sum_probs=228.1

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +.++.++. ..++.+..... .. ...+.++|+|+.|.|.. ..+++++.+.+++.+.+... ...|++..|..+||+++
T Consensus         5 ~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~i   79 (398)
T PRK08363          5 SERAMGVE-YAIRDVVLPAR-EL-EKKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAI   79 (398)
T ss_pred             hHHHHhcc-HHHHHHHHHHH-HH-HhcCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHH
Confidence            44555553 34555443332 22 23467999999999842 12678899999998877654 34798889999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968           97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV  176 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  176 (319)
                      +++++..+|..+++++|++|+|+++|+.+++.+++++||+|+++.|+|..+...++..|.+++.++..+++++.+|++.+
T Consensus        80 a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l  159 (398)
T PRK08363         80 VKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDI  159 (398)
T ss_pred             HHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHH
Confidence            99999888989999999999999999999999999999999999999999999999999988887433345678999999


Q ss_pred             HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                      ++.+.++++++++++||||||.+++.+++++|+++|+++|+++|+|++|.++.+++. +.++..+....++|+++||||.
T Consensus       160 ~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~  238 (398)
T PRK08363        160 RKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKV  238 (398)
T ss_pred             HhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhc
Confidence            999888889999999999999999999999999999999999999999999888653 3344455555689999999999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh----hcCCcchHHHHHHHHHHhcccccc
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN----ISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      |++||+|+||+++.++.      ++++.+.....    ...+++.+.|.+++.++.+..+|.
T Consensus       239 ~~~~GlRiG~~~~~~~~------~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l  294 (398)
T PRK08363        239 YFATGWRLGYIYFVDPE------GKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYL  294 (398)
T ss_pred             cCCccceEEEEEEeCcH------HHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHH
Confidence            99999999999973221      35555443322    234678999999988664433333

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=5.9e-40  Score=302.34  Aligned_cols=251  Identities=24%  Similarity=0.451  Sum_probs=216.5

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAI  123 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai  123 (319)
                      .++|+|+.|+|+    +++++.+.+++.+.+... ...|++..|.+++|+++++++++.+|..++++ +|++|+|+++|+
T Consensus        20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al   94 (378)
T PRK07682         20 EGVISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL   94 (378)
T ss_pred             CCeEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            579999999987    566777888888876643 45799888999999999999998888888876 799999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      .+++++++++||+|++++|+|..|...++..|.+++.++.+.++++++|++.+++++.++++++++++|+||||.+++.+
T Consensus        95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~  174 (378)
T PRK07682         95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS  174 (378)
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence            99999999999999999999999999999999999999876556788999999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++|+++|+++++++|+||+|.++.+++. +.++..+.. .+++++++||||.|++||+|+||++++.        +++
T Consensus       175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~i  245 (378)
T PRK07682        175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YFS  245 (378)
T ss_pred             HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HHH
Confidence            999999999999999999999999998753 233333332 3689999999999999999999999853        588


Q ss_pred             HHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968          283 DSIKSFLNI-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~q~~~~~~l~~  309 (319)
                      ++++..... ..+++.+.|.++..++.+
T Consensus       246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~  273 (378)
T PRK07682        246 EAMLKIHQYSMMCAPTMAQFAALEALRA  273 (378)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHHhC
Confidence            888776653 456789999998885544

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-39  Score=301.38  Aligned_cols=283  Identities=25%  Similarity=0.410  Sum_probs=231.5

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      +++.++....++.++.+...... .. ..+.++++|+.|.|+    +++++.+.+++.+...  ....|++..|.+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~   73 (397)
T PRK07568          2 KISKRVLNMPASPIRKLVPYADE-AK-KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELRE   73 (397)
T ss_pred             chhhHhhhCCcchHHHHHHHHHH-HH-hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHH
Confidence            35667777777778877654321 11 124679999999977    5678899998877643  2457999899999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC-CH
Q 020968           95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV-DL  173 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~  173 (319)
                      ++++++. .+|.++++++|++|+|+++|+..++..++++||+|++++|+|..+...++..|.+++.++.+.++++.. ++
T Consensus        74 ~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~  152 (397)
T PRK07568         74 AFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSK  152 (397)
T ss_pred             HHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCH
Confidence            9999998 478888999999999999999999999999999999999999999988999999999999865555553 68


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEec
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS  252 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s  252 (319)
                      ++++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++..+.++..+.. .+++++++|
T Consensus       153 ~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S  232 (397)
T PRK07568        153 EEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDS  232 (397)
T ss_pred             HHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEec
Confidence            9999998888899999999999999999999999999999999999999999999887655555555543 578999999


Q ss_pred             CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      |||.|++||+|+||++++++       ++++++........+++.+.|.+++.++...+.+
T Consensus       233 ~SK~~~~~G~R~G~~~~~~~-------~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~  286 (397)
T PRK07568        233 VSKRYSACGARIGCLISKNK-------ELIAAAMKLCQARLSPPTLEQIGAAALLDTPESY  286 (397)
T ss_pred             chhhccCCCcceEEEecCCH-------HHHHHHHHHhhccCCCCcHHHHHHHHHhhCCHHH
Confidence            99999999999999998642       4777666554433467899999998855433333

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=1.5e-39  Score=300.67  Aligned_cols=273  Identities=24%  Similarity=0.452  Sum_probs=229.0

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++++++....+.++++.....      +.+++|+|+.|.|+    +.+++.+.+++.+.+... ...|++..|.++||++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~   75 (391)
T PRK07309          7 FNKQLDKIEVSLIRQFDQSIS------DIPGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQA   75 (391)
T ss_pred             HHhhhhhcCccHHHHHHHHHH------hcCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHH
Confidence            367787777777777665332      23679999999987    566888899998877643 3479888899999999


Q ss_pred             HHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++++...+|+.+++ ++|++|+|+++++++++++++++||+|++++|+|..+...++..|.+++.++.+ ..++.+|++
T Consensus        76 ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~  154 (391)
T PRK07309         76 AADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPE  154 (391)
T ss_pred             HHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHH
Confidence            999999888877774 799999999999999999999999999999999999999999999999999874 345789999


Q ss_pred             HHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          175 AVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       175 ~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      .++++++.   +++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+.. +++|+++
T Consensus       155 ~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~~  233 (391)
T PRK07309        155 MLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILIN  233 (391)
T ss_pred             HHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEEe
Confidence            99998863   5789999999999999999999999999999999999999999999986654445444433 6899999


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~  309 (319)
                      ||||.|++||+|+||++++.        ++++++...... ..+++.+.|.++..++.+
T Consensus       234 S~SK~~g~~GlRvG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  284 (391)
T PRK07309        234 GLSKSHAMTGWRIGLIFAPA--------EFTAQLIKSHQYLVTAATTMAQFAAVEALTN  284 (391)
T ss_pred             cChhhccCccceeEEEEeCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHhC
Confidence            99999999999999999864        588888766543 456788999999885544

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-39  Score=299.97  Aligned_cols=279  Identities=24%  Similarity=0.430  Sum_probs=239.8

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      ++|.++..+.++.++.+.....+. . ..++++++|+.|+|+    +++++.+.+++.+.+.... ..|++..|..+||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~   75 (393)
T PRK05764          3 KLSKRVSRVTPSATLAVTAKAKEL-K-AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPELRE   75 (393)
T ss_pred             chhhhhhhcCchHHHHHHHHHHHH-H-hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHHHHH
Confidence            468899999999998888765433 2 235789999999987    5778999999988876543 46998889999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      ++++++.+.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+++.++.++++++.+|++
T Consensus        76 ~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  155 (393)
T PRK05764         76 AIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVE  155 (393)
T ss_pred             HHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHH
Confidence            99999988888888899999999999999999999999999999999999999999999999999999876667889999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc--CCCCCeEEEec
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF--GSIVPVLTLGS  252 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~~~vi~~~s  252 (319)
                      .+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+|++|+++.+++..+.++..+  +..+++++++|
T Consensus       156 ~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  235 (393)
T PRK05764        156 QLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNG  235 (393)
T ss_pred             HHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEec
Confidence            9999998888999999999999999999999999999999999999999999998866544454443  23468999999


Q ss_pred             CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      |||.++++|+|+||++++.        +++++++..... ...++++.|.++..++.
T Consensus       236 ~SK~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  284 (393)
T PRK05764        236 FSKAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALN  284 (393)
T ss_pred             CcccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHc
Confidence            9999999999999999753        588888777653 45778999998888553

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=3e-39  Score=298.55  Aligned_cols=276  Identities=26%  Similarity=0.419  Sum_probs=228.6

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD   98 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   98 (319)
                      +++.++.+.++.+.....       ..++++|+.|.|+    .+.++.+.+++.+.+... ..+|++..|.+++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~   72 (387)
T PRK07777          5 RLRPFGTTIFAEMSALAV-------RTGAVNLGQGFPD----EDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAA   72 (387)
T ss_pred             hhhhcCccHHHHHHHHHh-------hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence            456666666666665552       4689999999987    345667888887776653 3579988899999999999


Q ss_pred             HHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHHH
Q 020968           99 YLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAV  176 (319)
Q Consensus        99 ~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l  176 (319)
                      ++.+.+|..++++ +|++|+|+++|+.+++.+++++||+|+++.|+|..+...++..|.+++.++.++. .+|.+|++++
T Consensus        73 ~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l  152 (387)
T PRK07777         73 QRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDAL  152 (387)
T ss_pred             HHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHH
Confidence            9988888877776 7999999999999999999999999999999999999999999999999988765 4688999999


Q ss_pred             HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCcc
Q 020968          177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK  255 (319)
Q Consensus       177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK  255 (319)
                      ++.+.+++++|++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++..+.++..+.. .+++|+++||||
T Consensus       153 ~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  232 (387)
T PRK07777        153 RAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAK  232 (387)
T ss_pred             HHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechh
Confidence            9998888899999999999999999999999999999999999999999999886654445544432 467999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      .|++||+|+||++++.        +++++++..... ....+.+.|.+++.++...+.|.
T Consensus       233 ~~g~~GlRiG~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  284 (387)
T PRK07777        233 TFNVTGWKIGWACGPA--------PLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWV  284 (387)
T ss_pred             hccCcCceeEEEecCH--------HHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHH
Confidence            9999999999999854        477777766553 34567888988888555444444

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=1.6e-39  Score=302.33  Aligned_cols=260  Identities=17%  Similarity=0.205  Sum_probs=209.8

Q ss_pred             HHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCC
Q 020968           30 GVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLP  105 (319)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g  105 (319)
                      .+.+++.+...+..++++++|+.|+|+    +++++.+.+++.+.+...    ....|++..|.++||+++++++.+.+|
T Consensus        19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   94 (409)
T PRK07590         19 EIARRVNAFREANPEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARG   94 (409)
T ss_pred             HHHHHHHHHhhhcCCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcC
Confidence            344444444444456789999999987    678899999998877652    346898889999999999999988889


Q ss_pred             CCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCe-----------EEEEeccCCCCCcCCHH
Q 020968          106 YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE-----------VRHFDLLPAKGWEVDLD  174 (319)
Q Consensus       106 ~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~  174 (319)
                      ..+++++|++|+|+++++.+++ .++++||+|++++|+|..|...++..|.+           ++.++.+.++++.+|.+
T Consensus        95 ~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~  173 (409)
T PRK07590         95 CDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP  173 (409)
T ss_pred             CcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc
Confidence            9999999999999999999865 45689999999999999999999999987           88888865556666543


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI  253 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~  253 (319)
                      .      ++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++..+.++..+.. .+++|+++||
T Consensus       174 ~------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf  247 (409)
T PRK07590        174 E------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSF  247 (409)
T ss_pred             c------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecC
Confidence            2      47889999999999999999999999999999999999999999999887654455555543 2479999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHH------------HHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDS------------IKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      ||+|++||+|+||+++++        +++++            +..... ...+++.+.|.+++.++.
T Consensus       248 SK~~~~pGlRiG~~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~  307 (409)
T PRK07590        248 SKTAGFTGTRCAYTVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS  307 (409)
T ss_pred             ccccCCcCceeEEEEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc
Confidence            999999999999999864        35541            122222 234578899999988553

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=2.4e-39  Score=297.62  Aligned_cols=249  Identities=22%  Similarity=0.328  Sum_probs=208.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+.++++|+.|+|+    +++++.+.+++.+...  ....|++..|..+||+++++++++.+|..+++++|++|+|++++
T Consensus        22 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a   95 (374)
T PRK05839         22 KEYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV   95 (374)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence            35699999999987    5678899999887653  25689998999999999999999988988999999999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  200 (319)
                      +..++.+++  ++||.|+++.|+|..|...++..|++++.++.+.+++|.+|....+  + ++++++++++||||||.++
T Consensus        96 l~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~  172 (374)
T PRK05839         96 LFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTL  172 (374)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCccc
Confidence            999988874  5789999999999999999999999999999876677877765443  2 3688999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc------CCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF------GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG  274 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~------~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~  274 (319)
                      +.+++++|+++|+++|++||+||+|.++.+++ ...++...      ...+++|+++||||.|++||+|+||++++.   
T Consensus       173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~---  248 (374)
T PRK05839        173 SLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA---  248 (374)
T ss_pred             CHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH---
Confidence            99999999999999999999999999986543 22332221      233689999999999999999999999853   


Q ss_pred             CccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968          275 ILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       275 ~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~  309 (319)
                           +++++++..... ..+.+.+.|.++..++..
T Consensus       249 -----~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  279 (374)
T PRK05839        249 -----SILKKYKAYRTYLGCASPLPLQKAAAVAWLD  279 (374)
T ss_pred             -----HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc
Confidence                 588888777653 456788899888875543

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=4.1e-40  Score=305.05  Aligned_cols=281  Identities=22%  Similarity=0.249  Sum_probs=214.8

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCC--cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRT--ASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~--~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      ++...+++.++.+...+.+    ...+++|+|+.|.|.. +.+.+  .+.+.+++.+..+......|++..|.++||+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~-~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~ai   78 (396)
T PRK09257          4 HLEAAPADPILGLMEAFRA----DPRPDKVNLGVGVYKD-EQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAV   78 (396)
T ss_pred             cCCCCCCChHHHHHHHHhh----CCCcCcEecceeeEEC-CCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHH
Confidence            3456667777776654532    2246899999996421 11223  378888888876554555899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968           97 ADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD  172 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  172 (319)
                      ++++.+..+..+++++|  ++|+|+++|+.++++.+  +++||+|++++|+|+.|...++..|++++.++....+++++|
T Consensus        79 a~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d  158 (396)
T PRK09257         79 QELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLD  158 (396)
T ss_pred             HHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccC
Confidence            99997765555678887  99999999999998766  489999999999999999999999999999997444457899


Q ss_pred             HHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCCCcccC-CCCCe
Q 020968          173 LDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFG-SIVPV  247 (319)
Q Consensus       173 ~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~~~~-~~~~v  247 (319)
                      ++.+++.+.   .++.++++++||||||.++|.+++++|+++|++++++||+||+|.++.++ +....++..+. ..+++
T Consensus       159 ~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~v  238 (396)
T PRK09257        159 FDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLEL  238 (396)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcE
Confidence            999998875   23456667999999999999999999999999999999999999999875 22233333333 24679


Q ss_pred             EEEecCccccCCCcceeeEEEe--eCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          248 LTLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       248 i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      |+++||||.|+++|+|+||+++  +++..   -.+++.+++.... .+..++.+.|.+++.++
T Consensus       239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  298 (396)
T PRK09257        239 LVASSFSKNFGLYGERVGALSVVAEDAEE---ADRVLSQLKATIRTNYSNPPAHGAAIVATIL  298 (396)
T ss_pred             EEEEEcCCcCccccccceeEEEEeCCHHH---HHHHHHHHHHHhhhhcCCCcHHHHHHHHHHh
Confidence            9999999999999999999985  22110   0023344444333 34556889999888844

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-39  Score=281.47  Aligned_cols=260  Identities=22%  Similarity=0.389  Sum_probs=232.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ..+++.|+..|    ++|+.+|.+.+|+++.++.+.+ +|+  .+.+++-+++++|+++.++..++++.|++++|...++
T Consensus        24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi   96 (388)
T COG1168          24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI   96 (388)
T ss_pred             CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence            47999999999    5599999999999999988765 777  4678999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc-CCCCCcCCHHHHHhhhccC-ceEEEEcCCCCccccccC
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALADEN-TVALVIINPGNPCGNVYT  201 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~  201 (319)
                      ..+++++.++||.|++..|.|+++.......|.+++..|+. .++.|.+|.++||+++.+. .+++++||||||||.+++
T Consensus        97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt  176 (388)
T COG1168          97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT  176 (388)
T ss_pred             HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence            99999999999999999999999999999999999999986 4566899999999988764 589999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC--CCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI--VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~--~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                      .+++++|.++|.+||++||.||+|+++++.|+.+.+..++...  ++.|++.|.||+|+++|+++++++.+|+.      
T Consensus       177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~------  250 (388)
T COG1168         177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRE------  250 (388)
T ss_pred             HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHH------
Confidence            9999999999999999999999999999999887777777654  78999999999999999999999998853      


Q ss_pred             HHHHHHHHhhh--hcCCcchHHHHHHHHHHhccccccccc
Q 020968          280 GIVDSIKSFLN--ISSDPATFIQFLKSSRKLKRNSFLKSL  317 (319)
Q Consensus       280 ~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~l  317 (319)
                       ++++..+...  ...++|.++-.|...++-+++.|++.|
T Consensus       251 -lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L  289 (388)
T COG1168         251 -LRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDEL  289 (388)
T ss_pred             -HHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHH
Confidence             5555443332  356789999999999899999998765

>PLN02231 alanine transaminase

Probab=100.00  E-value=6.7e-39  Score=304.42  Aligned_cols=269  Identities=25%  Similarity=0.375  Sum_probs=215.8

Q ss_pred             hcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc--C-CCCCCCCCcCCHHHHHHHHH
Q 020968           22 TASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--A-RFNCYSSTVGILPARRAIAD   98 (319)
Q Consensus        22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~   98 (319)
                      ..+.+-+|+++...       ..+++|+|+.+.+.    ++  ..+++...+.+..  + ....|++..|.++||+++++
T Consensus       113 ~~~~~~~r~v~~~~-------~~p~~i~~~~~~~~----fp--~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~  179 (534)
T PLN02231        113 QQPITFFREVLALC-------DHPSLLDKSETHGL----FS--ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAA  179 (534)
T ss_pred             CCccHHHHHHHHhc-------cCCccCCCCCcccc----CC--HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHH
Confidence            33444555555433       35789999876544    33  2444445555554  2 35689999999999999999


Q ss_pred             HHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC-CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHH
Q 020968           99 YLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE  177 (319)
Q Consensus        99 ~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  177 (319)
                      ++.+.+|..+++++|++|+|+++|+..++++++. +||.|+++.|+|+.|...++..|.+++.++++++++|++|+++|+
T Consensus       180 ~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le  259 (534)
T PLN02231        180 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELK  259 (534)
T ss_pred             HHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHH
Confidence            9999889999999999999999999999999984 799999999999999999999999999999987778999999999


Q ss_pred             hhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCCCcccC-------C
Q 020968          178 ALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFG-------S  243 (319)
Q Consensus       178 ~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~~~~-------~  243 (319)
                      +.+++      ++++++++||+||||.++|.+++++|+++|+++|++||+||+|.++.|+ +..+.++..+.       .
T Consensus       260 ~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~  339 (534)
T PLN02231        260 KQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEK  339 (534)
T ss_pred             HHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccC
Confidence            98864      5788999999999999999999999999999999999999999999995 44454554432       1


Q ss_pred             CCCeEEEecCcccc-CCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          244 IVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       244 ~~~vi~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      ..++|+++|+||.| +++|+|+||+++++.     ++++++++.+..+...+++.+.|.++.. +++
T Consensus       340 ~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~~~-~l~  400 (534)
T PLN02231        340 DISLVSFQSVSKGYYGECGKRGGYMEVTGF-----TSDVREQIYKVASVNLCSNISGQILASL-VMS  400 (534)
T ss_pred             CceEEEEeccCcccccCCccceEEEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHHHH-HhC
Confidence            23689999999975 789999999987531     1358888877666444566777877766 443

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=3e-39  Score=302.57  Aligned_cols=259  Identities=23%  Similarity=0.378  Sum_probs=225.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc--CC-CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--AR-FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+.+++|+.|.|+.  ...+...+.+++.+..+.  .. ...|.+..|..+||+++++++...+|+.+++++|++|+|++
T Consensus        88 ~~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q  165 (459)
T COG1167          88 DPSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ  165 (459)
T ss_pred             CCceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence            38899999998763  355667777777776643  22 46888889999999999999997899999999999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEc-CCCCcccc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVII-NPGNPCGN  198 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~-~p~nptG~  198 (319)
                      +|+.++++.++++||+|++++|+|.....+++.+|++++.++++.+   ++|++.+++.++. ++++++++ +.+||||.
T Consensus       166 ~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~---G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~  242 (459)
T COG1167         166 QALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDED---GIDPEALEEALAQWKPKAVYVTPTFQNPTGV  242 (459)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC---CCCHHHHHHHHhhcCCcEEEECCCCCCCCCC
Confidence            9999999999999999999999999999999999999999998743   5999999999876 46666544 44899999


Q ss_pred             ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       199 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                      ++|.+..++|+++|+++|++||+||.|+++.+++.+.+++..++..++||+++||||+ .+||+|+||+++|.       
T Consensus       243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~-------  314 (459)
T COG1167         243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP-------  314 (459)
T ss_pred             ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH-------
Confidence            9999999999999999999999999999999998888888999988999999999999 59999999999974       


Q ss_pred             hHHHHHHHHhhh-hcCCcchHHHHHHHHHHhccccccccc
Q 020968          279 SGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFLKSL  317 (319)
Q Consensus       279 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~l  317 (319)
                       ++++++...+. ...+++.+.|.+++..+. +..|.++|
T Consensus       315 -~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~-~G~~~~hl  352 (459)
T COG1167         315 -ELIEKLLRLKQAADLGPSSLSQAALAAFLL-SGHYDRHL  352 (459)
T ss_pred             -HHHHHHHHHHHHhcCCCChHHHHHHHHHHH-cCCHHHHH
Confidence             58888888776 467889999999999555 66676664

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=6.2e-39  Score=292.50  Aligned_cols=246  Identities=27%  Similarity=0.415  Sum_probs=211.9

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEV  125 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~  125 (319)
                      +++|+.|+|+    +++++.+.+++++...  ....|++..|..+||+++++++.+.+|++++++ +|++|+|+++++..
T Consensus         2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~   75 (350)
T TIGR03537         2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH   75 (350)
T ss_pred             eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence            6899999986    6778999999988754  356899888999999999999998889889998 99999999999999


Q ss_pred             HHHHhcCCC---CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          126 ILTVLARPG---ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       126 ~~~~l~~~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ++.+++++|   |+|+++.|+|..|...++..|++++.++.++++++.+|+++++++++++++++++++|+||||.+++.
T Consensus        76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~  155 (350)
T TIGR03537        76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR  155 (350)
T ss_pred             HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence            999999887   69999999999999999999999999998766778899999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++|+++|+++|++||+||+|.++.+++ .+.++.... .+++|+++|+||.++++|+|+||++++.        .+.
T Consensus       156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~~  225 (350)
T TIGR03537       156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KLI  225 (350)
T ss_pred             HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HHH
Confidence            999999999999999999999999987754 333333333 3689999999999999999999998742        578


Q ss_pred             HHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          283 DSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      ++++..... ....+.+.|.++..++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~  252 (350)
T TIGR03537       226 SFLRKLRANFGVASPDFVQAAAKAAWS  252 (350)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHhC
Confidence            888876653 33556678888766454

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=3.9e-39  Score=303.17  Aligned_cols=256  Identities=22%  Similarity=0.369  Sum_probs=206.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc-----------CCCCCCCCCcCCHHHHHHHHHHHhhhCCC--CCCC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-----------ARFNCYSSTVGILPARRAIADYLNRDLPY--KLSP  110 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~--~~~~  110 (319)
                      +.++|+|+.+++.    +.. +.+.+.++.....           .....|++..|.++||+++|+++.+.+|.  .+++
T Consensus        37 p~g~i~L~~~En~----l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~  111 (468)
T PLN02450         37 PSGIIQMGLAENQ----LSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP  111 (468)
T ss_pred             CCeeEEeehhHhH----hhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence            4479999999854    222 5555555443210           12346988889999999999999887664  4689


Q ss_pred             CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhcc------C
Q 020968          111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------N  183 (319)
Q Consensus       111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~  183 (319)
                      ++|++|+|+++++..++.+++++||.|++++|+|..|...+. ..|++++.++.+.+++|.+|++++++++.+      +
T Consensus       112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~  191 (468)
T PLN02450        112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK  191 (468)
T ss_pred             HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999988777 589999999987677889999999987753      6


Q ss_pred             ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc---------CCCCCeEEEecCc
Q 020968          184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---------GSIVPVLTLGSIS  254 (319)
Q Consensus       184 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---------~~~~~vi~~~s~s  254 (319)
                      ++++++++||||||.+++.+++++|+++|++++++||+||+|+++.|++.++.+....         ...+++++++|||
T Consensus       192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S  271 (468)
T PLN02450        192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS  271 (468)
T ss_pred             eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence            7899999999999999999999999999999999999999999988876544443222         1346899999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      |.|++||+|+||++++++       .+++.+..... ...++.+.|.+++. +++++.|
T Consensus       272 K~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~-~L~~~~~  321 (468)
T PLN02450        272 KDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSA-LLSDKKF  321 (468)
T ss_pred             ccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHH-HhCCchh
Confidence            999999999999998752       24555554433 33578899999988 5555443

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.8e-39  Score=299.14  Aligned_cols=279  Identities=17%  Similarity=0.178  Sum_probs=210.0

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      ++....++.++.+.+..+    +...+++++|+.|.| +..+...+.+.+.+++.+........+|++..|.++||++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~----~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia   82 (404)
T PTZ00376          7 QVPLGPPDPILGLAAAFK----ADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQ   82 (404)
T ss_pred             cCCcCCCChHHHHHHHHh----hcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Confidence            344566667777766553    223568899999986 321112223445554444333334468999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEE--EeCCHHHHHHHHHH---HhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968           98 DYLNRDLPYKLSPDDVY--LTLGCTQAIEVILT---VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD  172 (319)
Q Consensus        98 ~~~~~~~g~~~~~~~i~--~~~G~t~ai~~~~~---~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  172 (319)
                      +++.+..+..+++++|+  .|.|+++|+.+++.   +++++||+|++++|+|+.|...++..|++++.++..+++++++|
T Consensus        83 ~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d  162 (404)
T PTZ00376         83 KLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLD  162 (404)
T ss_pred             HHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcC
Confidence            99976555567888998  48999999988865   66799999999999999999999999999999998555568999


Q ss_pred             HHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCCCcccC-CCCC
Q 020968          173 LDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFG-SIVP  246 (319)
Q Consensus       173 ~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~-~~~~  246 (319)
                      ++.+++.+.   ++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++.  ...++..+. ..++
T Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~  242 (404)
T PTZ00376        163 FDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE  242 (404)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc
Confidence            999999884   3356777899999999999999999999999999999999999999998641  122233332 2358


Q ss_pred             eEEEecCccccCCCcceeeEEEe--eCCCCCccchHHHH----HHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVD----SIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      +|+++||||.|++||+|+||+++  .+       +++++    .++.... .+.+++.++|.+++.++.
T Consensus       243 vi~i~SfSK~~~~~GlRvG~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~  304 (404)
T PTZ00376        243 FLVAQSFSKNMGLYGERIGALHIVCAN-------KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILS  304 (404)
T ss_pred             EEEEEeCCCcccccccccceEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhC
Confidence            99999999999999999999842  22       23333    3443333 344567899999988553

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=4.4e-38  Score=291.38  Aligned_cols=250  Identities=18%  Similarity=0.332  Sum_probs=211.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~a  122 (319)
                      +.++++|+.|+|+    ..+++.+.+++.+.+.......|++..|.++||+++++++.+.+|..++++ ++++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~  103 (395)
T PRK08175         28 GEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG  103 (395)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence            6789999999987    455677888887766555567899999999999999999998888888887 79999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCCCccccc
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNV  199 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~  199 (319)
                      ++.++..++++||+|++++|+|..+...++..|.+++.++.+.+++   +.++++++++   ++++++++++|+||||.+
T Consensus       104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~  180 (395)
T PRK08175        104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQC  180 (395)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence            9999999999999999999999999888899999999999865433   4777887765   367899999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                      ++.+++++|+++|+++|++||+||+|.++.+++....++..+.. .+++|+++||||.|++||+|+||++++.       
T Consensus       181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~-------  253 (395)
T PRK08175        181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP-------  253 (395)
T ss_pred             CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH-------
Confidence            99999999999999999999999999999887655555544432 3568999999999999999999999743       


Q ss_pred             hHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          279 SGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                       ++++++.+.... ..+++.+.|.++...+.
T Consensus       254 -~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~  283 (395)
T PRK08175        254 -ELVSALARIKSYHDYGTFTPLQVAAIAALE  283 (395)
T ss_pred             -HHHHHHHHHHhhcccCCCcHHHHHHHHHHh
Confidence             588888877653 44567788888777553

>PRK07324 transaminase; Validated

Probab=100.00  E-value=6.2e-39  Score=294.62  Aligned_cols=243  Identities=22%  Similarity=0.353  Sum_probs=210.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+.++++|+.|+|+    +..++.+ +++.+++..... .|++..|.++||+++++++.     .+++++|++|+|+++|
T Consensus        24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a   92 (373)
T PRK07324         24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA   92 (373)
T ss_pred             ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence            47889999999987    5667777 777777766544 89998999999999999984     2578999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +.+++.+++++||+|+++.|+|..+...++..|.+++.++.+.+++|.+|++++++.+.++++++++++||||||.+++.
T Consensus        93 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~  172 (373)
T PRK07324         93 NFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR  172 (373)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999877788899999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++|+++|+++|++||+||+|.++.+++. ..++...  .+++|+++||||.|+++|+|+||++++.        +++
T Consensus       173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~~--------~li  241 (373)
T PRK07324        173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAANE--------EVI  241 (373)
T ss_pred             HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecCH--------HHH
Confidence            9999999999999999999999999888653 3333332  3578999999999999999999999842        588


Q ss_pred             HHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          283 DSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      +++++.+.. ..+++.+.|.++..++
T Consensus       242 ~~~~~~~~~~~~~~~~~~q~~a~~~l  267 (373)
T PRK07324        242 DILRKYRDYTMICAGVFDDMLASLAL  267 (373)
T ss_pred             HHHHHHhCcEEecCChHHHHHHHHHH
Confidence            888887763 4567788888877654

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=4.8e-39  Score=294.31  Aligned_cols=247  Identities=20%  Similarity=0.316  Sum_probs=207.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..++|+|+.|+++    +++++.+.+++.+.+..  ...|+ +.|.++||+++++++      ++++++|++|+|++++
T Consensus        27 ~~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~--~~~Yp-~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~   93 (366)
T PRK01533         27 GDHSFVKLASNENP----FGCSPRVLDELQKSWLD--HALYP-DGGATTLRQTIANKL------HVKMEQVLCGSGLDEV   93 (366)
T ss_pred             CCCceEEeCCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence            35689999999976    78999999999887654  23564 568899999999998      5689999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +.+++++++++||+|+++.|+|..|...++..|++++.++.+   ++.+|++.++++++++++++++++||||||.+++.
T Consensus        94 i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~  170 (366)
T PRK01533         94 IQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVND  170 (366)
T ss_pred             HHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCH
Confidence            999999999999999999999999999999999999999874   34699999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++++++|++++ ++|+||+|.++.+++.....+..+...+++|+++||||.|++||+|+||++++.        +++
T Consensus       171 ~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~~  241 (366)
T PRK01533        171 RKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------ELI  241 (366)
T ss_pred             HHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HHH
Confidence            99999999998866 677899999887654322333334455789999999999999999999999853        588


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhcccccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKS  316 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~  316 (319)
                      ++++..... ++++.++|.++..++ ++.+|.++
T Consensus       242 ~~l~~~~~~-~~~~~~~q~aa~~~l-~~~~~~~~  273 (366)
T PRK01533        242 EKLNVVRLP-FNVSSLAQKAATIAF-GDDEFIEE  273 (366)
T ss_pred             HHHHHhcCC-CCcCHHHHHHHHHHh-CCHHHHHH
Confidence            888776643 578999999998855 45555543

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=6.7e-38  Score=295.89  Aligned_cols=259  Identities=20%  Similarity=0.353  Sum_probs=204.1

Q ss_pred             CCCeEeccCCCCCCCCCCCC-cHHHHHHHHHH------hhc-CCCCCCCCCcCCHHHHHHHHHHHhhhCC--CCCCCCcE
Q 020968           44 TRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHS------VRS-ARFNCYSSTVGILPARRAIADYLNRDLP--YKLSPDDV  113 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~------~~~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i  113 (319)
                      +.++|+|+.++...  .++. .+.+.+.....      +.. .....|++..|.++||+++|+++++.+|  +.+++++|
T Consensus        45 p~g~i~l~~aEN~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~I  122 (496)
T PLN02376         45 PHGIIQMGLAENQL--CLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERV  122 (496)
T ss_pred             CCceEEeecchhhh--hHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhE
Confidence            34799999997431  0122 33333332221      100 1234688888999999999999998777  66899999


Q ss_pred             EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhc------cCceE
Q 020968          114 YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALAD------ENTVA  186 (319)
Q Consensus       114 ~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~  186 (319)
                      ++|+|+++++..++.+++++||.|+++.|+|+.+...+. ..|++++.++++..++|++|++.+++++.      .++++
T Consensus       123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~  202 (496)
T PLN02376        123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKG  202 (496)
T ss_pred             EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeE
Confidence            999999999999999999999999999999999988777 58999999998766778999999976532      36788


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--------CCCeEEEecCccccC
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--------IVPVLTLGSISKRWI  258 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--------~~~vi~~~s~sK~~~  258 (319)
                      +++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+..        .+++++++||||.|+
T Consensus       203 l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~g  282 (496)
T PLN02376        203 LILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMG  282 (496)
T ss_pred             EEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCC
Confidence            999999999999999999999999999999999999999999988766666544421        135778999999999


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      +||+|+||++++++       .+.+.++.... ...++.+.|.+++. ++.+++|
T Consensus       283 lpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~~~-~L~d~~~  328 (496)
T PLN02376        283 LPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLMLAS-MLSDDQF  328 (496)
T ss_pred             CCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHH-HhCChhH
Confidence            99999999998653       35555544333 33578999999988 5556555

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=7.1e-38  Score=292.57  Aligned_cols=258  Identities=22%  Similarity=0.372  Sum_probs=209.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhh----------c-CCCCCCCCCcCCHHHHHHHHHHHhhhCC--CCCC
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR----------S-ARFNCYSSTVGILPARRAIADYLNRDLP--YKLS  109 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----------~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~  109 (319)
                      ++.++|+|+..+..     -..+.+.+.+++...          . .....|.+..|.++||+++|+++++.+|  ..++
T Consensus        45 np~g~i~l~~aeN~-----l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~  119 (447)
T PLN02607         45 NPSGVIQMGLAENQ-----VSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFD  119 (447)
T ss_pred             CCCceEEEechhhh-----hhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcC
Confidence            34569999999853     345666666655432          0 1223577888999999999999998776  3589


Q ss_pred             CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhcc------
Q 020968          110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------  182 (319)
Q Consensus       110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------  182 (319)
                      +++|++|+|+++++..++.+++++||.|+++.|.|..+...+. ..|+++++++.+..++|.+|++.+++++..      
T Consensus       120 p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~  199 (447)
T PLN02607        120 PDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANI  199 (447)
T ss_pred             HHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999987666 579999999987777788999999998763      


Q ss_pred             CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc----C--C-CCCeEEEecCcc
Q 020968          183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF----G--S-IVPVLTLGSISK  255 (319)
Q Consensus       183 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~--~-~~~vi~~~s~sK  255 (319)
                      ++++++++|||||||.++|.+++++++++|+++++++|+||+|..+.|++.++.++.++    .  . .++++++.|+||
T Consensus       200 ~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK  279 (447)
T PLN02607        200 RVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSK  279 (447)
T ss_pred             CeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchh
Confidence            67899999999999999999999999999999999999999999988876555555432    1  1 468999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      .|+++|+|+||+++.++       ++++.++.... +..+|.+.|.+++. ++.+++|.
T Consensus       280 ~fg~~GlRvG~ivs~n~-------~l~~~~~~~~~-~~~~s~~~q~~~~~-~L~d~~~~  329 (447)
T PLN02607        280 DLGLPGFRVGTIYSYND-------KVVTTARRMSS-FTLVSSQTQHLLAS-MLSDEEFT  329 (447)
T ss_pred             cCCCCcceEEEEEEcCH-------HHHHHHHHHhh-cCCCCHHHHHHHHH-HhCCchhH
Confidence            99999999999998542       46666655433 33568899999998 66665554

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.6e-38  Score=294.21  Aligned_cols=234  Identities=21%  Similarity=0.309  Sum_probs=189.9

Q ss_pred             cHHHHHHHHHHHhhhcCCC-------CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHH
Q 020968           27 TVRGVLNSLLENLNKNDTR-------PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADY   99 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   99 (319)
                      +..+|.+++.+.++++++.       ++|+|+.|.|+    +++++.+.++. +.+..   .+|++..|..++|++++++
T Consensus        75 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~  146 (527)
T PRK09275         75 QKEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKD  146 (527)
T ss_pred             ccccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHH
Confidence            3446777888888777553       37999999987    78888888855 44433   2599999999999999995


Q ss_pred             Hhh-hCCCCC-C--CCcEEEeCCHHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHhhCCC--eEEEEeccCCCC
Q 020968          100 LNR-DLPYKL-S--PDDVYLTLGCTQAIEVILTV-----LARPGANILLPRPGFPYYEARATHSHL--EVRHFDLLPAKG  168 (319)
Q Consensus       100 ~~~-~~g~~~-~--~~~i~~~~G~t~ai~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~--~~~~~~~~~~~~  168 (319)
                      +.+ ..+... .  .++|++|+|+++|+..++.+     ++++||+|++++|+|+.|...++..|.  +++.++.+++++
T Consensus       147 ~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~  226 (527)
T PRK09275        147 YLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENE  226 (527)
T ss_pred             HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccC
Confidence            543 333222 2  34899999999999999886     689999999999999999998887755  455555555677


Q ss_pred             CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                      |.+|+++++++++++++++++++||||||.+++.+++++|+++|++  ++++||+||+|.++.+.   +.++... ..++
T Consensus       227 f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~  302 (527)
T PRK09275        227 WQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYN  302 (527)
T ss_pred             CCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCC
Confidence            9999999999988899999999999999999999999999999965  59999999999998742   2333332 2368


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCC
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      +|+++||||.|+++|||+||++++++
T Consensus       303 ~I~v~SfSK~f~mtG~RlG~i~~~~~  328 (527)
T PRK09275        303 TILVYSFSKYFGATGWRLGVIALHED  328 (527)
T ss_pred             EEEEeehhhhccCcHhHHhhhhcCch
Confidence            99999999999999999999998764

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.4e-38  Score=288.19  Aligned_cols=249  Identities=19%  Similarity=0.289  Sum_probs=205.5

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-CCCCCCCcCCHHHHHHHHHHHhhhC--CCCCCCCcEEEeCCHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL--PYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~--g~~~~~~~i~~~~G~t~  121 (319)
                      +.+++|+.|+|+    +++++.+.+++.+.+.... ...|++ .|..+||+++++++++.+  |..+++++|++|+|+++
T Consensus        28 ~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~  102 (374)
T PRK02610         28 IQLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDE  102 (374)
T ss_pred             cceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHH
Confidence            358999999986    7899999999998776542 356864 699999999999998765  56789999999999999


Q ss_pred             HHHHHHHHhcCCCC-EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCCCCcc
Q 020968          122 AIEVILTVLARPGA-NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPC  196 (319)
Q Consensus       122 ai~~~~~~l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~npt  196 (319)
                      ++..++.+++.+|| +|+++.|+|..|...++..|++++.++.+ .++|++|+++++++++    .+++++++++|||||
T Consensus       103 al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPT  181 (374)
T PRK02610        103 LIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPT  181 (374)
T ss_pred             HHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCC
Confidence            99988888877885 89999999999999999999999999874 3458999999999876    478999999999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCc
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL  276 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~  276 (319)
                      |.+++.+++++++++|  ++++||+||+|.+|.+..    .+..+...+++|+++||||+|++||+|+||++++.     
T Consensus       182 G~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~----~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~-----  250 (374)
T PRK02610        182 GNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT----LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP-----  250 (374)
T ss_pred             CCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc----hHHHHhcCCCEEEEEecchhccCcccceeeeecCH-----
Confidence            9999999999999887  389999999999986421    22233344678999999999999999999999853     


Q ss_pred             cchHHHHHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968          277 QDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                         ++++++...+.. ++.+.+.|.++..++.+.+.+.
T Consensus       251 ---~l~~~l~~~~~~-~~~~~~~q~a~~~~l~~~~~~~  284 (374)
T PRK02610        251 ---ELIAVLEKVRLP-YNLPSFSQLAAQLALEHRQELL  284 (374)
T ss_pred             ---HHHHHHHHhcCC-CCCCHHHHHHHHHHhcCHHHHH
Confidence               588888776543 4568899998887554333333

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=6.9e-37  Score=283.97  Aligned_cols=246  Identities=18%  Similarity=0.272  Sum_probs=197.3

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ..+.++++|+.|+|.    +++++.+.+++.+.+.+.    ....|++..|.++||+++++++.+.   .+++++|++|+
T Consensus        30 ~~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~  102 (402)
T TIGR03542        30 HPSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISD  102 (402)
T ss_pred             cCCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECC
Confidence            356789999999976    678899999998877642    2357988899999999999986432   37889999999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCC-----------eEEEEeccCCCCCcCCHHHHHhhhccCceE
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHL-----------EVRHFDLLPAKGWEVDLDAVEALADENTVA  186 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  186 (319)
                      |+++++..++ .++.+||+|++++|+|..|...++..|+           +++.++.+.++++.+|.+.     .+++++
T Consensus       103 Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~  176 (402)
T TIGR03542       103 GAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDI  176 (402)
T ss_pred             CcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceE
Confidence            9999999864 5568999999999999999999999999           8888887655566666432     146789


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceee
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      +++++||||||.++|.+++++|+++|++++++||+||+|.++.+++..+.++..+.. .+++|+++||||.|++||+|+|
T Consensus       177 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG  256 (402)
T TIGR03542       177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLG  256 (402)
T ss_pred             EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceE
Confidence            999999999999999999999999999999999999999999876543444444443 3578999999999999999999


Q ss_pred             EEEeeCCCCCccchHHH--------HHHHHhh-hhcCCcchHHHHHHHHHHh
Q 020968          266 WLVTSDPNGILQDSGIV--------DSIKSFL-NISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       266 ~i~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~q~~~~~~l~  308 (319)
                      |++++.        +++        +.+.... ....+++.+.|.+++.++.
T Consensus       257 ~~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~  300 (402)
T TIGR03542       257 WTVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYA  300 (402)
T ss_pred             EEEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHc
Confidence            999864        233        2222222 2334578899998777443

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.6e-36  Score=278.47  Aligned_cols=273  Identities=21%  Similarity=0.296  Sum_probs=217.4

Q ss_pred             cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhC
Q 020968           27 TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDL  104 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~  104 (319)
                      .++.+++......++.+.+++++|+.|+|+    +++++.+.+++.+.....  ....|++..|.+++|+++++++.+.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~   90 (394)
T PRK06836         15 WIRKMFEEGARLKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRF   90 (394)
T ss_pred             HHHHHHHHHHHHHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHh
Confidence            355555443322222345788999999876    567899999998776542  24689888999999999999999888


Q ss_pred             CCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968          105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT  184 (319)
Q Consensus       105 g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  184 (319)
                      +..+++++|++|+|++++++.++.+++++||.|++++|+|..+...++..|++++.++.+++ ++++|++++++++++++
T Consensus        91 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~  169 (394)
T PRK06836         91 GTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKT  169 (394)
T ss_pred             CCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCc
Confidence            88889999999999999999999999999999999999999999999999999999998643 47899999999998889


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHH------cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKK------LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                      +++++++|+||||.+++.+++++|+++|++      +|++||+|++|.++.+++.....+..  ..+++++++||||.|+
T Consensus       170 ~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~  247 (394)
T PRK06836        170 KAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSLS  247 (394)
T ss_pred             eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhcc
Confidence            999999999999999999999999999999      89999999999999887644333322  2457999999999999


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHHHHhhhh--cCCcchHHHHHHHHHHh
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~  308 (319)
                      +||+|+||++++++.  .....++..+......  ...++.+.|.+++..+.
T Consensus       248 ~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  297 (394)
T PRK06836        248 LPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLD  297 (394)
T ss_pred             CcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC
Confidence            999999999986421  0000112222222221  23568889999888543

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.2e-37  Score=282.55  Aligned_cols=239  Identities=20%  Similarity=0.326  Sum_probs=201.2

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .++++|+.|.+.    .++++.+.+++.+.+..  ...|++ .+.++||+++++++      ++++++|++|+|+++++.
T Consensus        19 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~   85 (354)
T PRK06358         19 NMILDFSANINP----LGVPESLKQAITENLDK--LVEYPD-PDYLELRKRIASFE------QLDLENVILGNGATELIF   85 (354)
T ss_pred             cceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCC-ccHHHHHHHHHHHh------CCChhhEEECCCHHHHHH
Confidence            458999999865    46689999999887643  457865 46899999999998      578999999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      .+++++ .+ +.|+++.|+|..|...++..|++++.++.+.+++|.+| +++.+.+..+++++++++||||||.+++.++
T Consensus        86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~  162 (354)
T PRK06358         86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEE  162 (354)
T ss_pred             HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHH
Confidence            999987 34 68999999999999999999999999998766778899 6666666667899999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968          205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS  284 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  284 (319)
                      +++|+++|++++++||+||+|.+|.+++.....+..+...+++|+++||||.|++||+|+||++++++       .++++
T Consensus       163 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~-------~~~~~  235 (354)
T PRK06358        163 MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK-------NLAEK  235 (354)
T ss_pred             HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH-------HHHHH
Confidence            99999999999999999999999998764433344455567899999999999999999999998643       36777


Q ss_pred             HHHhhhhcCCcchHHHHHHHHHH
Q 020968          285 IKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       285 ~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      +...... ..++.+.|.++..++
T Consensus       236 ~~~~~~~-~~~~~~~q~~~~~~l  257 (354)
T PRK06358        236 LLQMREP-WSINTFADLAGQTLL  257 (354)
T ss_pred             HHHhCCC-CcchHHHHHHHHHHh
Confidence            7766553 466888999888855

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=6.9e-37  Score=280.53  Aligned_cols=261  Identities=22%  Similarity=0.315  Sum_probs=205.4

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|.++.......+.....    .. ...+.++++|+.|+|.    .+.++.+.+++.+...   ..+|++..|.++||++
T Consensus         3 ~~~~~~~~~~~~~~~~~~----~~-~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~   70 (364)
T PRK07865          3 VSARLPDFPWDTLAPAKA----TA-AAHPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTPELREA   70 (364)
T ss_pred             ccccCCCccHHHHHHHHH----HH-HhcCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHH
Confidence            455555554333333221    11 2245679999999976    4667888888876543   2479988899999999


Q ss_pred             HHHHHhhhCCCC-CCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           96 IADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        96 ia~~~~~~~g~~-~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      +++++.+.+|.. +++++|++|+|+++++..++..+ +++||.|++++|+|..+...++..|+++..++         ++
T Consensus        71 ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~  141 (364)
T PRK07865         71 IVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD---------SL  141 (364)
T ss_pred             HHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC---------Ch
Confidence            999999988886 89999999999999999988888 79999999999999999999999999988764         12


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc---CCCCCeEEE
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---GSIVPVLTL  250 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~~~vi~~  250 (319)
                      ++++   ..+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++.....+...   ...+++|++
T Consensus       142 ~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~  218 (364)
T PRK07865        142 TELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAV  218 (364)
T ss_pred             hhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEE
Confidence            2222   2467899999999999999999999999999999999999999999988865322222111   133689999


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      +||||.|++||+|+||+++++        +++++++..+. ....++.+.|.++..++.
T Consensus       219 ~S~SK~~~~~GlRiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  269 (364)
T PRK07865        219 HSLSKQSNLAGYRAGFVAGDP--------ALVAELLEVRKHAGMMVPAPVQAAMVAALG  269 (364)
T ss_pred             eechhccCCCceeeEEEecCH--------HHHHHHHHHHHhcCCCcCHHHHHHHHHHhC
Confidence            999999999999999999753        57888877654 345678899999888553

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=4.4e-37  Score=287.72  Aligned_cols=244  Identities=17%  Similarity=0.188  Sum_probs=200.6

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      ..+++|+.|.|+    .+++|.+.+++.+....  ...|++..|.++||+++++++.+..+   .+++|++|+|+++++.
T Consensus        85 ~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~  155 (431)
T PRK15481         85 TPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIE  155 (431)
T ss_pred             chhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHH
Confidence            356889989876    45556777777765433  34799989999999999999875322   3569999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEc-CCCCccccccCHH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQ  203 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~  203 (319)
                      .++++++++||.|++++|+|..|...++..|++++.++.+.+   ++|++.+++++++++++++++ +||||||.+++.+
T Consensus       156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~  232 (431)
T PRK15481        156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSAR  232 (431)
T ss_pred             HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHH
Confidence            999999999999999999999999999999999999998532   489999999887788888887 9999999999999


Q ss_pred             HHHHHHHHHHHc-CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++|+++|+++ +++||+||+|.++.+++.  .+.... ..+++|+++||||.|+ ||+|+||++++.        +++
T Consensus       233 ~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~~  300 (431)
T PRK15481        233 RAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDS--------ATS  300 (431)
T ss_pred             HHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HHH
Confidence            999999999999 999999999999986542  222222 2368999999999998 999999999853        577


Q ss_pred             HHHHHhhhh-cCCcchHHHHHHHHHHhccccc
Q 020968          283 DSIKSFLNI-SSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      +++...... ..+++.+.|.+++.++ ++.+|
T Consensus       301 ~~~~~~~~~~~~~~s~~~q~a~~~~l-~~~~~  331 (431)
T PRK15481        301 ARLRLRLNSGTQWVSHLLQDLVYACL-TDPEY  331 (431)
T ss_pred             HHHHHHHhccccCCCHHHHHHHHHHH-hCccH
Confidence            877765543 3467999999999954 44444

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=1.3e-37  Score=285.20  Aligned_cols=257  Identities=28%  Similarity=0.507  Sum_probs=216.9

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHH-HhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVH-SVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAI  123 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai  123 (319)
                      ++|+|+.|++......++++.+.+++.+ .........|++..|.++||+++++++++..|..++++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            6899999998743223366667777665 34445567999999999999999999997778888899 999999999999


Q ss_pred             HHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcc
Q 020968          124 EVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPC  196 (319)
Q Consensus       124 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~npt  196 (319)
                      ..++..+ .++|++|+++.|+|+.+...++..|++++.+++...+++.+|++.+++.+++      +++++++++|+|||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999999 7899999999999999999999999999999987778899999999999876      56899999999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCC
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI  275 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~  275 (319)
                      |.+++.+++++|+++|+++|++||+||+|+++.++.....+ ...+....++|+++|+||.|+++|+|+||++++.    
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~----  237 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP----  237 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH----
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh----
Confidence            99999999999999999999999999999999987653333 3445566679999999999999999999999953    


Q ss_pred             ccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccc
Q 020968          276 LQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRN  311 (319)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~  311 (319)
                          ++++.++.....+.. +.+.|.+++.++....
T Consensus       238 ----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~  268 (363)
T PF00155_consen  238 ----ELIERLRRFQRSGLS-SSPMQAAAAAALSDPE  268 (363)
T ss_dssp             ----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHH
T ss_pred             ----hhhhhhhhccccccc-cchhhHHHHHhhhccc
Confidence                588888887775444 8888888888665443

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.6e-37  Score=281.69  Aligned_cols=238  Identities=23%  Similarity=0.364  Sum_probs=200.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++++|+.|+++    +++++.+.+++.+.+..  ...|++ .|.++||+++++++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al   95 (357)
T PRK14809         29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL   95 (357)
T ss_pred             ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            5689999999876    67888999999887653  457864 68899999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++++++++||.|++++|+|..|...+...|.+++.++.+.++++.++.+.+++.. ++++++++++||||||.++|.+
T Consensus        96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~  174 (357)
T PRK14809         96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD  174 (357)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999988888899999999998866567888888887765 3578999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++++|+++|++ +++||+||+|.++.+++   ..+......+++++++||||.|++||+|+||+++++        ++++
T Consensus       175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~---~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~  242 (357)
T PRK14809        175 EVEALAERTDE-ETLVVVDEAYGEFAERP---SAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD  242 (357)
T ss_pred             HHHHHHHhCcc-CcEEEEechhhhccCCc---hhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence            99999999975 78999999999988643   122233445789999999999999999999999864        5788


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ++++.... ..++.++|.++..++.
T Consensus       243 ~~~~~~~~-~~~~~~~~~~a~~~l~  266 (357)
T PRK14809        243 AYARVNTP-FAASELACRAGLAALD  266 (357)
T ss_pred             HHHHhCCC-CCCCHHHHHHHHHHhC
Confidence            88776543 4568888888877553

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.4e-37  Score=283.14  Aligned_cols=245  Identities=20%  Similarity=0.305  Sum_probs=206.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ..++++|+.|++.    +++++.+.+++.+.+..  . .|.+..|.+++|+++++++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   94 (359)
T PRK03158         28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI   94 (359)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence            4589999999976    56788999999887653  2 4556679999999999998      45789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++++++++||+|++++|+|..+...+...|.++..++.+   ++++|++.+++.++++++++++++|+||||.+++.+
T Consensus        95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~  171 (359)
T PRK03158         95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE  171 (359)
T ss_pred             HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999985   357899999998888889999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++.++++.|+ +|++||+||+|.++.+++..+..+......+++|+++||||.|++||+|+||++++.        ++++
T Consensus       172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~  242 (359)
T PRK03158        172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELIE  242 (359)
T ss_pred             HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHHH
Confidence            9999988874 699999999999988765433333444455789999999999999999999999853        5788


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      +++..... .+++.++|.+++.++ ++.+|.+
T Consensus       243 ~~~~~~~~-~~~~~~~q~~~~~~l-~~~~~~~  272 (359)
T PRK03158        243 KLNIARPP-FNTTRIAQYAAIAAL-EDQAFLK  272 (359)
T ss_pred             HHHHhcCC-CCCCHHHHHHHHHHh-cCHHHHH
Confidence            88776654 467999999999855 4444443

>PLN02397 aspartate transaminase

Probab=100.00  E-value=1.1e-36  Score=283.70  Aligned_cols=281  Identities=17%  Similarity=0.167  Sum_probs=196.6

Q ss_pred             HHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCC-CCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968           20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGD-PSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD   98 (319)
Q Consensus        20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   98 (319)
                      +.....++|+.+.+...    ....+..++|+.|+ |+........+.+.+++...+......+|++..|.++||+++++
T Consensus        27 ~~~~~~~~i~~~~~~~~----~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~  102 (423)
T PLN02397         27 VEPAPPDPILGVTEAFL----ADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAK  102 (423)
T ss_pred             CCcCCCChHHHHHHHHh----hCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHH
Confidence            34455556666555443    33567789999996 55211112234566665544433444589999999999999999


Q ss_pred             HHhhhCCCCCCCCcE-----EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           99 YLNRDLPYKLSPDDV-----YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        99 ~~~~~~g~~~~~~~i-----~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      ++.+..+...+.++|     +.++|+. ++...+..++.+||+|++++|+|+.|...++..|++++.++....+++++|+
T Consensus       103 ~~~~~~~~~~~~~~i~~~~i~~g~Ga~-~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~  181 (423)
T PLN02397        103 LAYGADSPAIKENRVATVQCLSGTGSL-RLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF  181 (423)
T ss_pred             HHcCCCCchhhcCeeEeeecccchHHH-HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence            996543323333343     3333333 3444444555699999999999999999999999999999875444588999


Q ss_pred             HHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCCCcccC-CCCCe
Q 020968          174 DAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFG-SIVPV  247 (319)
Q Consensus       174 ~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~-~~~~v  247 (319)
                      +.+++.+.   ++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++.  ...++..+. ..+++
T Consensus       182 ~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v  261 (423)
T PLN02397        182 DGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEI  261 (423)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcE
Confidence            98887765   4567888899999999999999999999999999999999999999998651  222333332 23579


Q ss_pred             EEEecCccccCCCcceeeEEE--eeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          248 LTLGSISKRWIVPGWRLGWLV--TSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       248 i~~~s~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      |+++||||+|+++|||+||++  ++++..   -..+.+.++.... ...+++.+.|.+++.++.
T Consensus       262 I~~~SfSK~~~~~G~RvG~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~  322 (423)
T PLN02397        262 LVAQSYAKNMGLYGERVGALSVVCKSADV---AVRVKSQLKLIARPMYSNPPIHGASIVATILG  322 (423)
T ss_pred             EEEEECcccCCCccccceEEEEEeCCHHH---HHHHHHHHHHHHhcccCCCcHHHHHHHHHHhC
Confidence            999999999999999999996  322110   0012333444433 344578889988888553

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.1e-37  Score=281.79  Aligned_cols=248  Identities=20%  Similarity=0.312  Sum_probs=206.1

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc--CCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ..++|+.|+++    +++++.+.+++.+.+..  .....|++ .|.++||+++++++++.+|.++++++|++|+|+++++
T Consensus        27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l  101 (368)
T PRK03317         27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL  101 (368)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence            57999999976    78999999999987653  23457864 5889999999999999889899999999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~  202 (319)
                      .+++++++++||.|+++.|+|..|...++..|.+++.++.  .++|++|++++++++. .+++++++++|+||||.+++.
T Consensus       102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~  179 (368)
T PRK03317        102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL  179 (368)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999999998887765  3467899999999886 467889999999999999998


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++++++|   ++++|+||+|.++.+++.. .........+++|+++||||.|+++|+|+||++++.        +++
T Consensus       180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~~  247 (368)
T PRK03317        180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AVV  247 (368)
T ss_pred             HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HHH
Confidence            8888888877   6999999999998765532 222222334589999999999999999999999853        578


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      +.++.... ...++++.|.++..++...+.+
T Consensus       248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~~~~~  277 (368)
T PRK03317        248 DALRLVRL-PYHLSAVTQAAARAALRHADEL  277 (368)
T ss_pred             HHHHhcCC-CCCCCHHHHHHHHHHhhCHHHH
Confidence            88876553 3467889999888755433333

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=5.7e-36  Score=280.76  Aligned_cols=234  Identities=22%  Similarity=0.326  Sum_probs=184.4

Q ss_pred             cHHHHHHHHHHHhhhcCCC-------CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH-H
Q 020968           27 TVRGVLNSLLENLNKNDTR-------PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA-D   98 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~   98 (319)
                      +-.+|.+++.+.++++++.       ++|+|+.|+|+    +++++.+ .++.+.+..+   +|++..|..+++++++ +
T Consensus        69 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~  140 (521)
T TIGR03801        69 QKEGIEERFETFLAENKSQPGAEFLRDIISYVIDQLG----FDPDAFL-YEMCDGIIGD---NYPVPDRMLPHSEKIVHQ  140 (521)
T ss_pred             CcchHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHH-HHHHHHhhcC---CCCCCCCCHHHHHHHHHH
Confidence            3446777777777666443       37999999987    5655555 5555554332   5876667777777766 5


Q ss_pred             HHhhhCCCCC-CCC--cEEEeCCHHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHhhC--CCeEEEEeccCCCC
Q 020968           99 YLNRDLPYKL-SPD--DVYLTLGCTQAIEVILTV-----LARPGANILLPRPGFPYYEARATHS--HLEVRHFDLLPAKG  168 (319)
Q Consensus        99 ~~~~~~g~~~-~~~--~i~~~~G~t~ai~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~  168 (319)
                      |+.+.++... ..+  +|++|+|+++|+..++.+     ++++||+|+++.|+|+.|...++..  |.+++.++.++.++
T Consensus       141 y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~  220 (521)
T TIGR03801       141 YLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTE  220 (521)
T ss_pred             HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccc
Confidence            6666544333 333  899999999999999887     6899999999999999999887765  66777777654333


Q ss_pred             -----CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          169 -----WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       169 -----~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                           |.+|.++++++++++++++++++||||||.+++.+++++|+++|+++  +++||+||+|++|.++   +.++...
T Consensus       221 ~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~  297 (521)
T TIGR03801       221 DGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE  297 (521)
T ss_pred             cccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh
Confidence                 89999999998888899999999999999999999999999999986  9999999999998752   2333333


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      . .+++|+++||||.|+++|||+||++++++
T Consensus       298 ~-~~~vI~v~SfSK~fg~~G~RlG~i~~~~~  327 (521)
T TIGR03801       298 L-PYNTIGVYSFSKYFGATGWRLGTIALHKD  327 (521)
T ss_pred             C-CCCEEEEEcchhhccCchhhhhhhhcCch
Confidence            2 35899999999999999999999998753

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-36  Score=278.89  Aligned_cols=244  Identities=23%  Similarity=0.327  Sum_probs=201.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ..+++|+|+.|.+.    +.+++.+.+++.+....  ..+|++..| .+||+++++++      ++++++|++|+|++++
T Consensus        34 ~~~~~i~l~~~~~~----~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~  100 (371)
T PRK05166         34 GVPRIAKLGSNENP----LGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDL  100 (371)
T ss_pred             CCcceEEcCCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            46689999999876    56788999998875433  457988777 59999999998      4578899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +..++.+++++||.|+++.|+|..+...++..|++++.++.+.  ++++|++++++.++++++++++++|+||||.+++.
T Consensus       101 l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  178 (371)
T PRK05166        101 IAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTA  178 (371)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999999999999998753  46799999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      +++++|+++|++ +++||+||+|.++.+++..+..+..+. ..+++|+++||||.|++||+|+||++++++       ++
T Consensus       179 ~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~-------~l  250 (371)
T PRK05166        179 DQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP-------EL  250 (371)
T ss_pred             HHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH-------HH
Confidence            999999999875 889999999999986543222222222 235799999999999999999999887542       47


Q ss_pred             HHHHHHhhhhcCCcchHHHHHHHHHHhcc
Q 020968          282 VDSIKSFLNISSDPATFIQFLKSSRKLKR  310 (319)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~  310 (319)
                      ++.+++.... .+++.+.|.++..++...
T Consensus       251 ~~~~~~~~~~-~~~~~~~q~~~~~~l~~~  278 (371)
T PRK05166        251 VGLLDRVRTP-FNVNGAAQAAALAALDDE  278 (371)
T ss_pred             HHHHHHhccC-CCCCHHHHHHHHHHhcCH
Confidence            7777665543 457889998777755443

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=1.8e-35  Score=270.31  Aligned_cols=252  Identities=22%  Similarity=0.317  Sum_probs=201.8

Q ss_pred             cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCC
Q 020968           27 TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY  106 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~  106 (319)
                      .+..+.....+. + .++.++++|+.|+|.    +++++.+.+++.+...   ...|++..|.++||+++++++++.+|.
T Consensus         5 ~~~~~~~~~~~~-~-~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~   75 (357)
T TIGR03539         5 PWDSLAPYKAKA-A-SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGV   75 (357)
T ss_pred             hHHHHHHHHHHh-h-hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCC
Confidence            345555433332 2 246789999999976    5668888888876543   357998899999999999999998888


Q ss_pred             C-CCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968          107 K-LSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT  184 (319)
Q Consensus       107 ~-~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  184 (319)
                      . +++++|++|+|+++++..++..+ +++||.|++++|+|..+...++..|++++.++         +++.++   .+++
T Consensus        76 ~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~  143 (357)
T TIGR03539        76 PGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGP  143 (357)
T ss_pred             CCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCc
Confidence            6 99999999999999999999888 79999999999999999988899999887663         222222   2467


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc---CCCCCeEEEecCccccCCCc
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---GSIVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~~~vi~~~s~sK~~~~~G  261 (319)
                      +++++++|+||||.++|.+++++|+++|+++|++||+||+|.++.+++.....+...   ...+++|+++||||.|+++|
T Consensus       144 ~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G  223 (357)
T TIGR03539       144 DLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAG  223 (357)
T ss_pred             cEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCc
Confidence            899999999999999999999999999999999999999999988765322222110   12357999999999999999


Q ss_pred             ceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          262 WRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      +|+||++++.        +++++++..+.. ..+++.+.|.++..++
T Consensus       224 ~R~G~~i~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  262 (357)
T TIGR03539       224 YRAGFVAGDP--------ALVAELLTVRKHAGLMVPAPVQAAMVAAL  262 (357)
T ss_pred             eeEEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHc
Confidence            9999999753        577777766653 4567889999988754

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-35  Score=273.93  Aligned_cols=248  Identities=21%  Similarity=0.335  Sum_probs=208.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|++.    +++++.+.+++.+.+.......|++..|.+++|+++++++      ++++++|++|+|+++++
T Consensus        27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al   96 (380)
T PRK06225         27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL   96 (380)
T ss_pred             cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence            5689999999876    6888999999999887655667988889999999999998      45788999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ..++++++.+||+|++++|+|..+...++..|.+++.++++. ++++.+|++.+++.+.++++++++++|+||||.+++.
T Consensus        97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~  176 (380)
T PRK06225         97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE  176 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence            999999999999999999999999888999999999998743 3467899999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++|+++|+++|+++|+||+|.+|..+. .  +...+. .++++++.||||.|+++|+|+||+++++        +++
T Consensus       177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~--~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l~  244 (380)
T PRK06225        177 EEIKEFAEIARDNDAFLLHDCTYRDFAREH-T--LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DLI  244 (380)
T ss_pred             HHHHHHHHHHHHCCcEEEEehhHHHHhccC-C--chhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HHH
Confidence            999999999999999999999998875432 1  222222 3678999999999999999999999853        577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      ++++.......+.+.++|.++...+.....|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~  275 (380)
T PRK06225        245 EVVKSIVINDLGTNVIAQEAAIAGLKVKDEW  275 (380)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHhcchHH
Confidence            7777765444567888888877655443344

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=1.4e-35  Score=276.47  Aligned_cols=256  Identities=23%  Similarity=0.319  Sum_probs=196.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      ..+++|+|+.|+|+..  ..+.+.+.+++.+.+...    ....|++..|.++||+++++++++.+|..+++++|++|+|
T Consensus        28 ~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~G  105 (416)
T PRK09440         28 RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNG  105 (416)
T ss_pred             cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccC
Confidence            3478899999998731  123456777777765542    2357999999999999999999988899999999999999


Q ss_pred             HHHHHHHHHHHhcC-----CCCEEEE-cCCCCcchHHHHhhCCC----eEEEEeccCCC-CCcCCHHHHHhhhccCceEE
Q 020968          119 CTQAIEVILTVLAR-----PGANILL-PRPGFPYYEARATHSHL----EVRHFDLLPAK-GWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       119 ~t~ai~~~~~~l~~-----~gd~Vl~-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v  187 (319)
                      +++++.++++++++     +||.|++ +.|+|+.|...+...+.    ....+++..+. ++.+|++.++  +.++++++
T Consensus       106 a~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i  183 (416)
T PRK09440        106 SQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAI  183 (416)
T ss_pred             hHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEE
Confidence            99999999999985     5899999 79999999876654432    22222332211 4679999987  35577899


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      ++++||||||.+++.+++++|+++|+++|++||+||+|..+.... ....... ...+++|+++||||+ ++||+|+||+
T Consensus       184 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~  260 (416)
T PRK09440        184 CVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILCMSLSKL-GLPGVRCGIV  260 (416)
T ss_pred             EEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEEeccccc-CCCcceEEEE
Confidence            999999999999999999999999999999999999998643110 0001100 114689999999997 9999999999


Q ss_pred             EeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          268 VTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      +++.        ++++++...... ..+++.+.|.+++.+ +++.+|.
T Consensus       261 i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~-l~~~~~~  299 (416)
T PRK09440        261 IADE--------EIIEALSNMNGIISLAPGRLGPAIAAEM-IESGDLL  299 (416)
T ss_pred             eCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHH-hccchHH
Confidence            9853        588888877654 456799999999984 4444443

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=6e-36  Score=273.40  Aligned_cols=245  Identities=24%  Similarity=0.361  Sum_probs=198.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ++.++++|+.|+++    +++++.+.+++.+.+..  ...|++ .+.++||+++++++      ++++++|++|+|++++
T Consensus        18 ~~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~   84 (356)
T PRK08056         18 SPDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETES   84 (356)
T ss_pred             ChhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence            35679999999876    68999999999887654  346875 46899999999998      5688999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +..+++++ .+|+ ++++.|+|..|...++..|.+++.++.++++++.+| +++++.+.++++++++++||||||.+++.
T Consensus        85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~  161 (356)
T PRK08056         85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPER  161 (356)
T ss_pred             HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCH
Confidence            99999987 5775 677899999999999999999999998766677777 44555566788999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++|+++|++++++||+||+|.++.+++..+.+.  +...+++++++||||+|+++|+|+||++++++       +++
T Consensus       162 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-------~~~  232 (356)
T PRK08056        162 QLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD-------AAV  232 (356)
T ss_pred             HHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCCH-------HHH
Confidence            999999999999999999999999988755322222  23346899999999999999999999998542       466


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ++++.... ...++.+.|.++..++ .++.|.
T Consensus       233 ~~l~~~~~-~~~~~~~~~~~a~~~l-~~~~~~  262 (356)
T PRK08056        233 ARMRRQQM-PWSINAFAALAGEVIL-QDRAYQ  262 (356)
T ss_pred             HHHHHhCC-CCchhHHHHHHHHHHh-CCHHHH
Confidence            77765443 2456778887777744 444443

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-35  Score=267.68  Aligned_cols=238  Identities=21%  Similarity=0.386  Sum_probs=205.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      .+++++|+.+...    +++++.+.+++.+.+.  .++.|+.. ...++++++++++..     .++++|++++|+.+.|
T Consensus        21 ~~~~i~LssNenP----~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i   88 (356)
T COG0079          21 LPGIIKLSSNENP----YGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELI   88 (356)
T ss_pred             CccceeecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHH
Confidence            4469999999755    6888999999988776  35678865 789999999999942     5789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++++++.+||+|+++.|+|..|...++..|++++.++..+   |..|++.+.+.+.+++++|++||||||||..++.+
T Consensus        89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~  165 (356)
T COG0079          89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE  165 (356)
T ss_pred             HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999999854   88999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      +++++++.+.+ +.+||+||||.+|..    ...+.......|+++++||||+|+++|+|+||++++        +++++
T Consensus       166 ~l~~l~~~~~~-~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~--------~~~i~  232 (356)
T COG0079         166 ELRALLEALPE-GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN--------PELIA  232 (356)
T ss_pred             HHHHHHHhCCC-CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCC--------HHHHH
Confidence            99999999988 999999999999874    222222334567999999999999999999998874        46999


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHhcc
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKLKR  310 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~~~  310 (319)
                      .+++.+..+ ..+.++|.++..++-++
T Consensus       233 ~l~~vr~p~-~v~~~a~~aa~aal~~~  258 (356)
T COG0079         233 ALNKVRPPF-NVSSPALAAAIAALRDA  258 (356)
T ss_pred             HHHHhcCCC-CCCHHHHHHHHHHcccH
Confidence            999988863 56888888887754443

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=1.9e-35  Score=270.52  Aligned_cols=244  Identities=15%  Similarity=0.224  Sum_probs=193.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ...++|+|+.|.+.    +++++.+.+++.+.+..  ...|++. +..+||+++|+++      ++++++|++|+|++++
T Consensus        20 ~~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~   86 (360)
T PRK07392         20 PPDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAEL   86 (360)
T ss_pred             CcccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence            34578999999765    67889999999887664  4579865 5689999999999      5689999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCC---cCCHHHHHhhhccCceEEEEcCCCCccccc
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW---EVDLDAVEALADENTVALVIINPGNPCGNV  199 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~v~l~~p~nptG~~  199 (319)
                      +.++++++. +||.|++++|+|..|...++..|++++.++.+.++++   ..+++.+++.. .+++++++++||||||.+
T Consensus        87 i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~  164 (360)
T PRK07392         87 LTWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKL  164 (360)
T ss_pred             HHHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCC
Confidence            999999875 6889999999999999999999999999998765553   35666666543 367899999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                      ++.+++.   ++++++++ +|+||+|.+|.+++.....+......+++|+++||||.|++||+|+||+++++        
T Consensus       165 ~~~~~l~---~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~--------  232 (360)
T PRK07392        165 WSREAIL---PLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP--------  232 (360)
T ss_pred             cCHHHHH---HHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--------
Confidence            9966554   55566775 66699999998765432223334455789999999999999999999999864        


Q ss_pred             HHHHHHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968          280 GIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      ++++++..... ..+++.+.|.++..++ +++.|.+
T Consensus       233 ~~~~~~~~~~~-~~~~s~~~q~~~~~~l-~~~~~~~  266 (360)
T PRK07392        233 DRLQRWQQWRD-PWPVNGLAAAAAIAAL-ADRDFQQ  266 (360)
T ss_pred             HHHHHHHhhCC-CCCCCHHHHHHHHHHh-ccHHHHH
Confidence            47777765543 3567999999998854 4455554

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=1e-35  Score=272.79  Aligned_cols=239  Identities=18%  Similarity=0.191  Sum_probs=196.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      .+++++|+.|++.    +++++.+.+++.+.+..  ...|++. +..+||+++++++      ++++++|++|+|+++++
T Consensus        42 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai  108 (370)
T PRK09105         42 AEGAVFLNANECP----LGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPL  108 (370)
T ss_pred             CCCcEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHH
Confidence            3578999999976    68899999999887653  2368765 4899999999987      56899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++.+++++||+|++++|+|..|...++..|++++.++.+.  ++.+|++++++. .++++++++++||||||.+++.+
T Consensus       109 ~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~  185 (370)
T PRK09105        109 NYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRA  185 (370)
T ss_pred             HHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHH
Confidence            999999999999999999999999999999999999998753  567999999876 45678999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++++.++ +++++|+||+|.+|...   + +...+ ...+++++++||||.|+++|+|+||++++.        +++
T Consensus       186 ~l~~l~~~~~-~~~~lIvDEaY~~f~~~---~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i  252 (370)
T PRK09105        186 DIEWLLANKP-AGSVLLVDEAYIHFSDA---P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLL  252 (370)
T ss_pred             HHHHHHHhCC-CCcEEEEECchHHhccC---c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHH
Confidence            9999998764 59999999999876531   1 22222 345789999999999999999999999853        577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ++++.. . ...++.+.|.++..++.+ +.|.
T Consensus       253 ~~l~~~-~-~~~~~~~~~~aa~~~L~~-~~~~  281 (370)
T PRK09105        253 AKLARF-G-HNPLPVPAAAAGLASLRD-PKLV  281 (370)
T ss_pred             HHHHhc-C-CCCcCHHHHHHHHHHHhC-HHHH
Confidence            777765 2 234677888887775543 3443

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=7.7e-36  Score=272.45  Aligned_cols=246  Identities=20%  Similarity=0.315  Sum_probs=205.0

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      +++|+|+.|.++    +++++.+.+++.+.+..  ...|+ +.|.+++|+++++++      ++++++|++++|+++++.
T Consensus        22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~-~~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~   88 (352)
T PRK03321         22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYP-DMGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ   88 (352)
T ss_pred             ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence            478999999977    67788999999887653  44675 569999999999999      367889999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      .++..++++||+|+++.|+|..|...++..|.+++.++.+++  +++|++.+++.++++++++++++|+||||.+++.++
T Consensus        89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~  166 (352)
T PRK03321         89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE  166 (352)
T ss_pred             HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence            999999999999999999999998889999999999987533  578999999999888899999999999999999888


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968          205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS  284 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  284 (319)
                      +.++++.+ +++++||+||+|.++.+++....++......+++++++||||.|++||+|+||++++.        ++++.
T Consensus       167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~~  237 (352)
T PRK03321        167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIAA  237 (352)
T ss_pred             HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHHH
Confidence            88888876 4699999999999998866443344444555789999999999999999999999853        58888


Q ss_pred             HHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968          285 IKSFLNISSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       285 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      +++... ...++.++|.++..++...+.+.+
T Consensus       238 ~~~~~~-~~~~s~~~q~~a~~~l~~~~~~~~  267 (352)
T PRK03321        238 LRKVAV-PFSVNSLAQAAAIASLAAEDELLE  267 (352)
T ss_pred             HHHhcC-CCCCCHHHHHHHHHHhcCHHHHHH
Confidence            876543 346789999887775654444433

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-35  Score=269.73  Aligned_cols=242  Identities=17%  Similarity=0.259  Sum_probs=200.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ....++|+.|+++    +++++.+.+++.+....  ...|++. +..+||+++|+++      ++++++|++|+|+++++
T Consensus        31 ~~~~~~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l   97 (369)
T PRK08153         31 RPFRARIGANESG----FGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLL   97 (369)
T ss_pred             CcceeEecCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence            3345799999976    78899999999887643  3468865 5799999999998      46889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ..++..++++||.|+++.|+|+.+...+...|.+++.++.+.+   .+|++++++.+ +.+++++++++|+||||.+++.
T Consensus        98 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~  174 (369)
T PRK08153         98 GLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHPA  174 (369)
T ss_pred             HHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999998888899999999987432   47899887765 4577899999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++++++|++ +++||+||+|.++.+++. ..++..  ..+++|+++||||.|++||+|+||++++.        +++
T Consensus       175 ~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~~  242 (369)
T PRK08153        175 ADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GTI  242 (369)
T ss_pred             HHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HHH
Confidence            999999999874 999999999999887652 222222  24689999999999999999999999853        577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      +.++..... .+++++.|.++..++ ++++|.+
T Consensus       243 ~~l~~~~~~-~~~s~~~q~~~~~~l-~~~~~~~  273 (369)
T PRK08153        243 KAFDKVRNH-FGMNRIAQAAALAAL-KDQAYLA  273 (369)
T ss_pred             HHHHHhhcC-CCCCHHHHHHHHHHh-cCHHHHH
Confidence            777766654 467899999998855 4455544

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3e-35  Score=270.76  Aligned_cols=238  Identities=18%  Similarity=0.265  Sum_probs=195.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|.++    +++++.+.+++.+..   ....|++ .+..+||+++++++      ++++++|++|+|+++++
T Consensus        51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i  116 (380)
T PLN03026         51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI  116 (380)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence            5689999999866    677888888886521   2345765 47899999999998      46889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ..++.+++++||+|++++|+|..|...++..|.+++.++.+  .+|.+|++++++.+ .++++++++++||||||.+++.
T Consensus       117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~  194 (380)
T PLN03026        117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD  194 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999998874  35789999999988 6788999999999999999998


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++++++.+    ++||+||+|.+|.+.+.   ........+++|+++||||.|+++|+|+||++++.        +++
T Consensus       195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~---~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~i  259 (380)
T PLN03026        195 DDLLKILELP----ILVVLDEAYIEFSTQES---RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SII  259 (380)
T ss_pred             HHHHHHHhcC----CEEEEECcchhhcCCcc---hHHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HHH
Confidence            8888888753    89999999999876432   12223345789999999999999999999999853        578


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      +++++.... ++.+.++|.++..++ ++.+|.
T Consensus       260 ~~l~~~~~~-~~~~~~~q~aa~~aL-~~~~~~  289 (380)
T PLN03026        260 EYLWRAKQP-YNVSVAAEVAACAAL-SNPKYL  289 (380)
T ss_pred             HHHHHhcCC-CCCCHHHHHHHHHHh-hCHHHH
Confidence            888776654 457889998888755 333443

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=6.6e-35  Score=289.38  Aligned_cols=246  Identities=16%  Similarity=0.281  Sum_probs=203.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~  121 (319)
                      ++.++|+|+.|+++    +++++.+.+++.+.+...   .+  ..|.+++|+++++++.+.+|+..++ ++|++++|+++
T Consensus       695 ~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e  765 (1082)
T PLN02672        695 QESSLIHMDVDESF----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA  765 (1082)
T ss_pred             CCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence            46799999999977    789999999999876542   22  3356789999999999988988765 58999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCC-Cccccc
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPG-NPCGNV  199 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~-nptG~~  199 (319)
                      ++..++++++++||+|+++.|+|+.|...++..|++++.++.+++++|.+|.+.+++++++ +.+++++++|| ||||.+
T Consensus       766 lL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v  845 (1082)
T PLN02672        766 LFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLL  845 (1082)
T ss_pred             HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCcc
Confidence            9999999999999999999999999999999999999999997667899999999999865 45689999997 999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC--CCCc----ccCC---CCCeEEEecCccccCCCcceeeEEEee
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF--VPMG----VFGS---IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~----~~~~---~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ++.+++++|+++|+++|++||+||+|.++.|++...  .++.    .+..   ..+||+++||||.|++||+|+||++++
T Consensus       846 ~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap  925 (1082)
T PLN02672        846 YSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALN  925 (1082)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeC
Confidence            999999999999999999999999999999876431  1111    1111   247999999999999999999999986


Q ss_pred             CCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHH
Q 020968          271 DPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSS  305 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~  305 (319)
                      ++       +++++++..... ..+....|.++..
T Consensus       926 ~~-------eLi~~l~~~~~~-s~~~~~~q~Aaaa  952 (1082)
T PLN02672        926 DS-------VLIDAFHSAPGL-SRPHSTLKYTIKK  952 (1082)
T ss_pred             CH-------HHHHHHHHhhhh-cCCCcHHHHHHHH
Confidence            52       377888765442 2223345555444

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-34  Score=266.95  Aligned_cols=265  Identities=18%  Similarity=0.224  Sum_probs=193.1

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC---CCcEEEeCCHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS---PDDVYLTLGCTQA  122 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~---~~~i~~~~G~t~a  122 (319)
                      +.++.++|....-....+.+.+.+++.+. .......|++..|.++||+++++++.+..+ ..+   .++|++|+|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~a   81 (388)
T PRK08637          4 TKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHG   81 (388)
T ss_pred             cceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHH
Confidence            45566666533111123333444433332 223456899999999999999999876443 333   2578999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHH-hhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCCCCccc
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARA-THSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPCG  197 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~nptG  197 (319)
                      +..++.+++++||+|++++|+|+.|...+ ...|.+++.++... +++++|++++++.++    +...++++++||||||
T Consensus        82 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG  160 (388)
T PRK08637         82 LSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTG  160 (388)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCC
Confidence            99999999999999999999999998875 46899999999742 234689999998876    4445677889999999


Q ss_pred             cccCHHHHHHHHHHHHH-----cCCEEEEeCCCCCccCCCCCCCCC-ccc-CCCCCe--EEEecCccccCCCcceeeEEE
Q 020968          198 NVYTYQHLQKIAETAKK-----LGIMVIADEVYDHLAFGNTPFVPM-GVF-GSIVPV--LTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~-----~~~~li~D~a~~~~~~~~~~~~~~-~~~-~~~~~v--i~~~s~sK~~~~~G~r~G~i~  268 (319)
                      .+++.+++++|+++|++     ++++||+||+|.++.|++....++ ..+ ...+++  ++++|+||.|++||+|+||++
T Consensus       161 ~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~  240 (388)
T PRK08637        161 YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFIT  240 (388)
T ss_pred             CCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEE
Confidence            99999999999998875     899999999999999877554443 222 334565  455699999999999999999


Q ss_pred             eeCCCCCccchHHHHHHHHh----hh-hcCCcchHHHHHHHHHHhcccccccc
Q 020968          269 TSDPNGILQDSGIVDSIKSF----LN-ISSDPATFIQFLKSSRKLKRNSFLKS  316 (319)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~q~~~~~~l~~~~~~~~~  316 (319)
                      ++.+.+  .++++++++...    .. ...++|.+.|.++..+ ++++.|.++
T Consensus       241 ~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~-l~~~~~~~~  290 (388)
T PRK08637        241 FGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRA-LNSPEFDKE  290 (388)
T ss_pred             EccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHH-hCCHHHHHH
Confidence            764100  013566666542    11 2346789999999884 445555443

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-34  Score=264.73  Aligned_cols=241  Identities=19%  Similarity=0.336  Sum_probs=196.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      .+..++|+.|+++    +++|+.+.+++.+.+.......|++. +.++||+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l   89 (351)
T PRK14807         21 IPYKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEII   89 (351)
T ss_pred             CCceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHH
Confidence            3467899999986    78999999999987765455678754 5689999999998      56889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~  202 (319)
                      ..++.+++++||+|+++.|+|..+...++..|++++.++.+  .++.+|++++++.+++ +++++++++|+||||.+++.
T Consensus        90 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~  167 (351)
T PRK14807         90 HLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER  167 (351)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999875  3467999999999865 78999999999999999997


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++.++++   +++.++|+||+|.++.  +....+  .....+++|+++||||.|++||+|+||++++.        +++
T Consensus       168 ~~l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~~  232 (351)
T PRK14807        168 EDIIKIIE---KSRGIVVVDEAYFEFY--GNTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NIL  232 (351)
T ss_pred             HHHHHHHH---hCCCEEEEeCcchhhc--ccchHH--HhhhCCCEEEEecchHhcccchhceeeeecCH--------HHH
Confidence            77766654   5567899999998874  222222  12344689999999999999999999999853        578


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ++++..... ...+.+.|.++..++ .+..+.
T Consensus       233 ~~~~~~~~~-~~~~~~~q~~~~~~l-~~~~~~  262 (351)
T PRK14807        233 KYLNLVKSP-YNINSLSQVIALKVL-RTGVLK  262 (351)
T ss_pred             HHHHHccCC-CCcCHHHHHHHHHHH-hHHHHH
Confidence            888766553 456889999998854 334443

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-35  Score=267.81  Aligned_cols=234  Identities=21%  Similarity=0.341  Sum_probs=196.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~a  122 (319)
                      +.++++|+.|+++    +++++.+.+++.+.+.......|++ .+..+||++++++++      +.. ++|++|+|++++
T Consensus        25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~   93 (356)
T PRK04870         25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL   93 (356)
T ss_pred             CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence            4589999999976    7999999999998876555567887 578999999999983      233 589999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccC
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~  201 (319)
                      +..++.+++++||+|++++|+|..|...++..|++++.++.+  +++.+|++.+++.+. .+++++++++||||||.+++
T Consensus        94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~  171 (356)
T PRK04870         94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD  171 (356)
T ss_pred             HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999885  357899999999885 47899999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      .+++++|+++|   +.++|+||+|.++.+..  ..  ..+...+++++++|||| +++||+|+||++++.        ++
T Consensus       172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~--~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~  235 (356)
T PRK04870        172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WL--PRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW  235 (356)
T ss_pred             HHHHHHHHHHC---CCEEEEECCchhhcCcc--hH--HHHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence            99999999998   68899999999876432  11  12334468999999999 799999999999853        57


Q ss_pred             HHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          282 VDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      +++++..+.. ++++.+.|.++..++
T Consensus       236 i~~~~~~~~~-~~~~~~~q~~a~~~l  260 (356)
T PRK04870        236 IAELDKVRPP-YNVNVLTQATALFAL  260 (356)
T ss_pred             HHHHHHccCC-CcCCHHHHHHHHHHH
Confidence            7877766543 457888998876644

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.5e-35  Score=266.04  Aligned_cols=233  Identities=17%  Similarity=0.314  Sum_probs=192.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ..++|+|+.|++.    +++++.+.+++.+.+... ...|++. +.++||+++++++      ++++++|++|+|+++++
T Consensus        23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al   90 (353)
T PRK05387         23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL   90 (353)
T ss_pred             ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence            4578999999976    677889999998876643 3578655 6699999999998      46889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++++++++||+|++++|+|+.|...++..|++++.++.+  +++.+|++++++    ..+++++++||||||.+++.+
T Consensus        91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~  164 (353)
T PRK05387         91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA  164 (353)
T ss_pred             HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999874  357899998874    357889999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++++|+++++  ++++|+||+|.+|.  +....+  .....+++++++||||.|++||+|+||++++.        ++++
T Consensus       165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~--~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~~  230 (353)
T PRK05387        165 EIERILAANP--DSVVVIDEAYVDFG--GESAIP--LIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELIE  230 (353)
T ss_pred             HHHHHHHhCC--CcEEEEeCcccccC--CcchHH--HHhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHHH
Confidence            9999988654  89999999998753  322222  22345679999999999999999999999753        5788


Q ss_pred             HHHHhhhh--cCCcchHHHHHHHHHHh
Q 020968          284 SIKSFLNI--SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       284 ~~~~~~~~--~~~~~~~~q~~~~~~l~  308 (319)
                      +++.....  ...++.+.|.++..++.
T Consensus       231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~  257 (353)
T PRK05387        231 ALNRVKNSFNSYPLDRLAQAGAIAAIE  257 (353)
T ss_pred             HHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence            88776643  24578899999888553

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.3e-34  Score=265.88  Aligned_cols=244  Identities=18%  Similarity=0.304  Sum_probs=202.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+.++++|+.|.+.    +++++.+.+++.+.+..  ...|++.. ..+||+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~   96 (367)
T PRK02731         30 GIADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEI   96 (367)
T ss_pred             CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            46789999999865    46788899999887653  45787653 479999999998      4578899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +..++.+++++||+|+++.|+|..+...++..|++++.++.   +++.+|++.+++.+++++++|++++|+||||.+++.
T Consensus        97 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~  173 (367)
T PRK02731         97 LELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPA  173 (367)
T ss_pred             HHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCH
Confidence            99999999999999999999999988888999999998886   346799999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++++++.|+ +++++|+||+|.++.+++.....+......+++++++|+||.|+++|+|+||+++++        +++
T Consensus       174 ~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~~  244 (367)
T PRK02731        174 EEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EII  244 (367)
T ss_pred             HHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HHH
Confidence            99999998875 599999999999988765433334333445689999999999999999999999853        577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      ++++..... ...+.++|.++..++ ++.+|
T Consensus       245 ~~l~~~~~~-~~~~~~~~~~a~~~l-~~~~~  273 (367)
T PRK02731        245 DALNRVRQP-FNVNSLALAAAVAAL-DDDAF  273 (367)
T ss_pred             HHHHHccCC-CCCCHHHHHHHHHHh-CCHHH
Confidence            888776553 355788998888844 44444

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-34  Score=261.12  Aligned_cols=232  Identities=21%  Similarity=0.346  Sum_probs=190.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|+++    +++++.+.+++.+.+.......|++ .|.++||+++++++      ++++++|++|+|+++++
T Consensus        17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l   85 (337)
T PRK03967         17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI   85 (337)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence            4478999999976    6888999999998876544567864 68999999999999      46889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++..+  +||+|+++.|+|..|...++..|.+++.++.+  .++.+|++.+++.. ++++++++++|+||||.+++.+
T Consensus        86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~  160 (337)
T PRK03967         86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE  160 (337)
T ss_pred             HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence            9988876  79999999999999988889999999999875  34789999998865 4678889999999999999977


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++.+++    ++++++|+||+|.+|...  ...  ......+++|+++||||.|++||+|+||+++++        ++++
T Consensus       161 ~l~~i~----~~~~~ii~De~y~~~~~~--~~~--~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i~  224 (337)
T PRK03967        161 EILKVL----ETGKPVVLDEAYAEFSGK--SLI--GLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EIID  224 (337)
T ss_pred             HHHHHH----hcCCEEEEECchhhhccc--chH--HHHhhCCCEEEEecchHhhcchhhhheeeecCH--------HHHH
Confidence            666654    369999999999987531  211  122334679999999999999999999999853        5888


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      +++..... ++.+.++|.++..++.
T Consensus       225 ~~~~~~~~-~~~~~~~q~~~~~~l~  248 (337)
T PRK03967        225 ALYRIKPP-FSLNILTMKIVRLALD  248 (337)
T ss_pred             HHHhhcCC-CCCCHHHHHHHHHHHh
Confidence            88877654 3568999999988553

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-33  Score=255.97  Aligned_cols=230  Identities=19%  Similarity=0.280  Sum_probs=185.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+.++|+|+.|+++    +++++.+.+++.+.+.......|++. +.++||+++++++++. +  +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~-~--~~~~~i~it~Ga~~~   88 (335)
T PRK14808         17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTD-F--LSKNNVSVGNGADEI   88 (335)
T ss_pred             CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCC-C--CCcceEEEcCCHHHH
Confidence            35689999999977    79999999999887765444457654 8999999999999763 2  689999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      |.++++++    |.|++++|+|..|...++..|++++.++.+.  ++.++...    + ..++++++++||||||.+++.
T Consensus        89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~  157 (335)
T PRK14808         89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFER  157 (335)
T ss_pred             HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence            99999887    6799999999999999999999999998754  34444332    2 246899999999999999998


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++|+    +++++||+||+|.+|.  +....+  .....+++|+++||||+|+++|+|+||++++.        +++
T Consensus       158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~~  221 (335)
T PRK14808        158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KFI  221 (335)
T ss_pred             HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeCH--------HHH
Confidence            8888886    4799999999999974  222212  12334689999999999999999999999864        588


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      +++++.+.. .+.+.++|.++..++.
T Consensus       222 ~~l~~~~~~-~~~~~~~q~a~~~~l~  246 (335)
T PRK14808        222 DAYNRVRLP-FNVSYVSQMFAKVALD  246 (335)
T ss_pred             HHHHHhcCC-CCCCHHHHHHHHHHHh
Confidence            888776633 4578899988766443

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=2.8e-33  Score=255.02  Aligned_cols=237  Identities=20%  Similarity=0.386  Sum_probs=197.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +++++|+|+.|+++    +++++.+.+++.++...  ...|++..+ +++|+++++++      ++++++|++++|++++
T Consensus        17 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~   83 (346)
T TIGR01141        17 GGKEVIKLNSNENP----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEI   83 (346)
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHH
Confidence            45789999999976    67889999999987643  347877655 89999999999      3578899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +..++.+++++||+|++++|+|..+...++..|.+++.++.+.+  +.+|++++++.+.+++++|++++|+||||.+++.
T Consensus        84 l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~  161 (346)
T TIGR01141        84 IELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSR  161 (346)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999888888999999999987543  5799999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++.++++.++ +++++|+|++|..+.+.+. +  .......+++++++|+||+|+++|+|+||++++.        +++
T Consensus       162 ~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~--~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~  229 (346)
T TIGR01141       162 SDIEAVLERTP-EDALVVVDEAYGEFSGEPS-T--LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EII  229 (346)
T ss_pred             HHHHHHHHhCC-CCcEEEEECchhhhcCCcc-H--HHHHhhCCCEEEEehhhHhhhchhhhceeeecCH--------HHH
Confidence            99999999887 7999999999998765321 1  1112233468999999999999999999999853        577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++..... .+.++++|.++..++
T Consensus       230 ~~~~~~~~~-~~~~~~~~~~~~~~l  253 (346)
T TIGR01141       230 DALNKVRAP-FNLSRLAQAAAIAAL  253 (346)
T ss_pred             HHHHhccCC-CCCCHHHHHHHHHHh
Confidence            777765543 456888998887744

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=9.9e-33  Score=252.75  Aligned_cols=229  Identities=19%  Similarity=0.310  Sum_probs=183.7

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      ..+.|+.++..    +++++..         ......|+.. +..+||+++++++      ++++++|++|+|+++++.+
T Consensus        32 ~~~~~~~ne~~----~~~~~~~---------~~~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~   91 (364)
T PRK04781         32 GDVWLNANESA----WANPADP---------DASTRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDL   91 (364)
T ss_pred             CCEEeeCCCCC----CCCChhh---------cchhccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHH
Confidence            45778777643    3444321         1124578754 4699999999998      4688999999999999999


Q ss_pred             HHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCH
Q 020968          126 ILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       126 ~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ++++++.+| ++|+++.|+|..|...++..|.+++.++... .+++.+|++++++.+ .++++++++++||||||.+++.
T Consensus        92 ~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~  171 (364)
T PRK04781         92 LVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIAL  171 (364)
T ss_pred             HHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCH
Confidence            999999888 7999999999999888899999999999743 456778999886544 5678999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++++++|++ +++||+||+|.+|.+..   .........+++|+++||||+|++||+|+||++++.        +++
T Consensus       172 ~~~~~l~~~~~~-~~~iI~Deay~~f~~~~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~  239 (364)
T PRK04781        172 DQIERALQALQG-KALVVVDEAYGEFSDVP---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELI  239 (364)
T ss_pred             HHHHHHHHhCCC-CcEEEEeCcchhhcCCc---chHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHH
Confidence            999999999864 79999999999987532   122223445789999999999999999999999853        588


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      +.+++.... .+.+.+.|.++..++
T Consensus       240 ~~l~~~~~~-~~~~~~~~~~a~~~l  263 (364)
T PRK04781        240 AVLRRCQAP-YPVPTPCAALAEQAL  263 (364)
T ss_pred             HHHHhccCC-CCCCHHHHHHHHHHH
Confidence            888877654 356888898777644

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=4.6e-32  Score=243.32  Aligned_cols=217  Identities=15%  Similarity=0.229  Sum_probs=173.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ..++|+|+.|...    ++ |+.+.+++.+.+..  ...|+.   ...+|+++++++.         ++|++|+|+++++
T Consensus         7 ~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al   67 (311)
T PRK08354          7 EEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEAL   67 (311)
T ss_pred             ccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHH
Confidence            4578999999643    33 57888888877543  346753   4789999999882         4799999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++..+ .+||+|+++.|+|..|...++..|.+++.++        +|++.+++.++ +++++++++||||||.+++.+
T Consensus        68 ~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~  137 (311)
T PRK08354         68 YLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK  137 (311)
T ss_pred             HHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence            9888654 4899999999999999999999999987543        58888988776 467899999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++++|+++|+++|+++|+||+|.+|.+++..   .    ..+++|+++||||+|++||+|+||+++           +.+
T Consensus       138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~---~----~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~  199 (311)
T PRK08354        138 ELKPLLDAVEDRNALLILDEAFIDFVKKPES---P----EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE  199 (311)
T ss_pred             HHHHHHHHhhhcCcEEEEeCcchhccccccc---c----CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence            9999999999999999999999999886521   1    146899999999999999999999997           344


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      .++..... ...+...|.++.. +++
T Consensus       200 ~l~~~~~~-~~~~~~~~~~~~~-~~~  223 (311)
T PRK08354        200 AFRSVRMP-WSIGSTGYAFLEF-LIE  223 (311)
T ss_pred             HHHHcCCC-ccCCHHHHHHHHH-HHH
Confidence            55554432 2345555555554 443

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.2e-32  Score=252.28  Aligned_cols=234  Identities=19%  Similarity=0.341  Sum_probs=189.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE-eCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL-TLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-~~G~t~a  122 (319)
                      +.++|+|+.|++.    +++++.+.+++.+.+..  ...|++. ..+++|+++++++      +++++++++ ++|++++
T Consensus        33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~   99 (361)
T PRK00950         33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYT------GVPVENIIVGGDGMDEV   99 (361)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence            3489999999865    57788899998877654  3468765 4499999999998      457889999 7899999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +..++++++++||+|+++.|+|..+...++..|++++.++.  +.+|.+|++.+++.++++++++++++|+||||.+++.
T Consensus       100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~  177 (361)
T PRK00950        100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE  177 (361)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence            99999999999999999999999998889999999998884  3457899999999888788999999999999999996


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++.   ++|+++|+++|+|++|.++.  +....++  ....+++++++||||.|++||+|+||+++++        +++
T Consensus       178 ~~l~---~l~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~  242 (361)
T PRK00950        178 EDIR---KILESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WLI  242 (361)
T ss_pred             HHHH---HHHHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HHH
Confidence            6555   55667799999999999876  2222221  2234679999999999999999999999853        577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      +.++..... ...+.+.|.++..++.
T Consensus       243 ~~~~~~~~~-~~~~~~~~~~a~~~l~  267 (361)
T PRK00950        243 DYYMRAKTP-FSLTRLSQAAAIAALS  267 (361)
T ss_pred             HHHHHhcCC-CCCCHHHHHHHHHHhc
Confidence            777776654 3467888888777453

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-33  Score=253.98  Aligned_cols=229  Identities=20%  Similarity=0.333  Sum_probs=185.0

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .+.++|+.+++.    +++++.+        .......|+.. ...+|++++++++      ++++++|++|+|+++++.
T Consensus        28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~-~~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~   88 (351)
T PRK01688         28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPEC-QPKAVIENYAAYA------GVKPEQVLVSRGADEGIE   88 (351)
T ss_pred             CCceEecCCCCC----CCCChhh--------cccccccCCCC-ChHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence            356999999865    4555543        11234568654 4589999999998      568999999999999999


Q ss_pred             HHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          125 VILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       125 ~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      .++++++++| |+|+++.|+|..|...++..|++++.++.++  +|.+|++++++++ +++++++++|||||||.+++.+
T Consensus        89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~  165 (351)
T PRK01688         89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ  165 (351)
T ss_pred             HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence            9999999887 9999999999999999999999999998753  5889999999887 4789999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++++|++.|++ +.+||+||+|.+|....   .....+...+++|+++||||.|+++|+|+||++++.        ++++
T Consensus       166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~  233 (351)
T PRK01688        166 DLRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN  233 (351)
T ss_pred             HHHHHHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence            99999999986 68899999999986321   112223445789999999999999999999999753        5788


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      .+++.... +.++.+.|.++..++.
T Consensus       234 ~l~~~~~~-~~v~~~~~~~a~~~L~  257 (351)
T PRK01688        234 LLLKVIAP-YPLSTPVADIAAQALS  257 (351)
T ss_pred             HHHhccCC-CCCCHHHHHHHHHHHh
Confidence            88766543 3467777777766443

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=5e-32  Score=244.96  Aligned_cols=216  Identities=17%  Similarity=0.191  Sum_probs=168.8

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .++|+|+.+....   .++++.+.+   ..     ...|+.  +..+||+++++++        ..++|++|+|++++|.
T Consensus        20 ~~~i~l~~ne~p~---~~~~~~~~~---~~-----~~~yp~--~~~~Lr~~ia~~~--------~~~~I~it~Gs~~al~   78 (330)
T PRK05664         20 ADWLDLSTGIAPW---PWPVPAIPA---DA-----WARLPE--TDDGLEAAARAYY--------GAPQLLPVAGSQAAIQ   78 (330)
T ss_pred             HHheeecCCcCCC---CCCCcccCH---HH-----HHhCCC--ChHHHHHHHHHHh--------CCCCEEECcCHHHHHH
Confidence            4679999995321   122122211   11     124754  3389999999998        3579999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      +++.  +.+||+|++++|+|+.|...++..|++++.++.+          ++++.++ +++++++++||||||.+++.++
T Consensus        79 ~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~  145 (330)
T PRK05664         79 ALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SLDVLVVVNPNNPTGRRFDPAR  145 (330)
T ss_pred             HHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CCCEEEEeCCcCCCCCccCHHH
Confidence            8863  4799999999999999999999999999988752          3444443 5678999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968          205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS  284 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  284 (319)
                      +++|+++|++++++||+||+|.++..    ..++..+...+++|+++||||.|++||+|+||++++.        ++++.
T Consensus       146 l~~l~~~~~~~~~~iI~DE~y~~~~~----~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l~~~  213 (330)
T PRK05664        146 LLAWHARLAARGGWLVVDEAFMDNTP----QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------ALLRA  213 (330)
T ss_pred             HHHHHHHHHhcCCEEEEECCcccCCC----cccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HHHHH
Confidence            99999999999999999999987641    2344455556789999999999999999999999853        58888


Q ss_pred             HHHhhhhcCCcchHHHHHHHHHH
Q 020968          285 IKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       285 ~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      +...... ...+.+.|.++..++
T Consensus       214 ~~~~~~~-~~~~~~~~~~~~~~L  235 (330)
T PRK05664        214 LAELLGP-WTVSGPTRWLAQAAL  235 (330)
T ss_pred             HHHhcCC-CCCCHHHHHHHHHHH
Confidence            8776543 356788888877744

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=2.5e-31  Score=242.34  Aligned_cols=225  Identities=21%  Similarity=0.274  Sum_probs=180.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      .+++++|+.|++.    +++++.+.+++.+.+..  ...|++..|..++|+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al   88 (349)
T PRK07908         21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF   88 (349)
T ss_pred             CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            6789999999976    68899999999987654  357988889999999999998      46889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..+++ + ++| .++++.|+|..+...++..|++++.++.+.  ++.+|++.+    .++++++++++||||||.++|.+
T Consensus        89 ~~~~~-l-~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~  159 (349)
T PRK07908         89 ALLAR-L-RPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE  159 (349)
T ss_pred             HHHHh-c-CCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence            99888 4 564 677889999999999999999999998854  367888755    34678999999999999999976


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++.   ++|+ ++.++|+||+|.++..+ . ..++... ..+++++++||||.|+++|+|+||++++.        ++++
T Consensus       160 ~l~---~l~~-~~~~iIvDe~y~~~~~~-~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~~~  224 (349)
T PRK07908        160 QLL---ALRR-PGRILVVDEAFADAVPG-E-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAP--------DVLA  224 (349)
T ss_pred             HHH---HHHh-cCCEEEEECcchhhccC-C-ccccccc-cCCCEEEEeecccccCCccceeeeeecCH--------HHHH
Confidence            554   4554 47889999999997643 2 3344332 33579999999999999999999999753        5778


Q ss_pred             HHHHhhhhcCCcchHHHHHHHH
Q 020968          284 SIKSFLNISSDPATFIQFLKSS  305 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~  305 (319)
                      +++..... ...+++.|.+++.
T Consensus       225 ~~~~~~~~-~~~~~~~~~a~~~  245 (349)
T PRK07908        225 RLTRGRAH-WPVGTLQLEAIAA  245 (349)
T ss_pred             HHHhcCCC-CCccHHHHHHHHH
Confidence            77765543 3456677776666

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=8e-32  Score=244.26  Aligned_cols=223  Identities=14%  Similarity=0.182  Sum_probs=171.5

Q ss_pred             CCeEeccCCCCCCCCCCCCc-HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEeCCHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTA-SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQA  122 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~~G~t~a  122 (319)
                      .++++|+.+...    ++++ +.+..   ..     ...|+.. . .+||+++++++      ++. +++|++|+|++++
T Consensus        24 ~~~i~ls~Nenp----~~~~~~~~~~---~~-----~~~Yp~~-~-~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~   83 (339)
T PRK06959         24 DAWLDLSTGINP----HGYPVPPVPA---DA-----WRRLPED-D-DGLAACAARYY------GAPDAAHVLPVAGSQAA   83 (339)
T ss_pred             hhhceeccCCCC----CCCCCCCCCH---HH-----HHhCCCc-h-HHHHHHHHHHh------CCCCcccEEECcCHHHH
Confidence            568999999744    2333 22111   11     2358753 4 89999999998      344 5899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      |.++.. ++++|+ |+++.|+|..|...++..|.+++.++.+.        +.+    .+..+++++++||||||.+++.
T Consensus        84 i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~  149 (339)
T PRK06959         84 IRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPA  149 (339)
T ss_pred             HHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCH
Confidence            997755 567776 88999999999999999999998887532        222    2245689999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++++++.|++++.++|+||+|.++.+.    .++..+...+++|+++||||.|++||+|+||++++.        +++
T Consensus       150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~li  217 (339)
T PRK06959        150 ARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------ALL  217 (339)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HHH
Confidence            99999999999999999999999998642    233333334679999999999999999999999853        588


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      +++++.... +..+.+.|.++..++ ++.+|.+
T Consensus       218 ~~l~~~~~~-~~vs~~~q~a~~~~L-~~~~~~~  248 (339)
T PRK06959        218 AALRDALGA-WTVSGPARHAVRAAF-ADAAWQA  248 (339)
T ss_pred             HHHHHhcCC-CCCcHHHHHHHHHHh-CcHHHHH
Confidence            888887654 346889999988854 4444443

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.1e-31  Score=242.95  Aligned_cols=215  Identities=19%  Similarity=0.227  Sum_probs=168.3

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      ++|+|+.+...    +..             ......|+. ....+||+++++++      ++++++|++|+|+++++..
T Consensus        17 ~~i~l~~Nenp----~~~-------------~~~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~   72 (332)
T PRK06425         17 RIIDFSANIND----FMD-------------IGDISIYPE-ISYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR   72 (332)
T ss_pred             CEEEeccccCC----CcC-------------hhhcccCcC-cCHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence            78999999743    210             012346864 46799999999999      5689999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968          126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       126 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l  205 (319)
                      ++. +.++| .|++++|+|..|...++..|++++.++.+.   +..|.+.+++   .+++++++++||||||.+++.+++
T Consensus        73 ~~~-~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~  144 (332)
T PRK06425         73 LLS-YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSL  144 (332)
T ss_pred             HHH-HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHH
Confidence            997 45676 477779999999999999999999999853   3456665543   367899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHH
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI  285 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~  285 (319)
                      ++|+++|++++++||+||+|.+|.+++. +.........+++|+++||||.|++||+|+||++++.        ++++++
T Consensus       145 ~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~l  215 (332)
T PRK06425        145 LTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKIS  215 (332)
T ss_pred             HHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHHH
Confidence            9999999999999999999999987542 1222222344689999999999999999999999864        578877


Q ss_pred             HHhhhhcCCcchHHHHH
Q 020968          286 KSFLNISSDPATFIQFL  302 (319)
Q Consensus       286 ~~~~~~~~~~~~~~q~~  302 (319)
                      +.....+ ..+.+++.+
T Consensus       216 ~~~~~~~-~~~~~~~~~  231 (332)
T PRK06425        216 RKITEPW-SVCDPAIDF  231 (332)
T ss_pred             HHcCCCC-ccCHHHHHH
Confidence            7654432 234444433

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-32  Score=247.76  Aligned_cols=227  Identities=19%  Similarity=0.338  Sum_probs=181.2

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .++++|+.+++.    +++++.+      ...  ....|++. +..+||+++|+++      ++++++|++|+|++++|.
T Consensus        31 ~~~~~l~~ne~~----~~~~~~~------~~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~   91 (354)
T PRK04635         31 RGDIWINANESP----FNNEYKL------DLA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIE   91 (354)
T ss_pred             CCcEEeeCCCCC----CCCChhh------hhH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHH
Confidence            467999999865    4555433      111  24578865 5799999999997      578999999999999999


Q ss_pred             HHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          125 VILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       125 ~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      +++++++++| |+|+++.|+|..|...++..|++++.++.+  +++.+|++.++. + +++++|++++||||||.+++.+
T Consensus        92 ~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~  167 (354)
T PRK04635         92 LLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRA  167 (354)
T ss_pred             HHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHH
Confidence            9999999998 999999999999999999999999999985  346789988874 3 5789999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      +++++++.|+  +++||+||+|.++.... .  ........+++++++||||+|+++|+|+||++++.        ++++
T Consensus       168 ~l~~l~~~~~--~~~vivDeay~~~~~~~-s--~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~~  234 (354)
T PRK04635        168 DIEQLIEMTP--DAIVVVDEAYIEFCPEY-S--VADLLASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELIE  234 (354)
T ss_pred             HHHHHHHhCC--CcEEEEeCchHhhccCc-c--hHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHHH
Confidence            9999999876  49999999999876321 1  11112344689999999999999999999999853        5777


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      .++..... .+.+.+.|.++..++.
T Consensus       235 ~l~~~~~~-~~~~~~~~~~a~~~l~  258 (354)
T PRK04635        235 ILMRVIAP-YPVPLPVSEIATQALS  258 (354)
T ss_pred             HHHhhcCC-CCCCHHHHHHHHHHHh
Confidence            77765443 3456777777666443

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.97  E-value=6.5e-31  Score=237.74  Aligned_cols=227  Identities=20%  Similarity=0.283  Sum_probs=181.1

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ++++++|+.|.+.    ++++  ..+..     .....+|++..+ +++|+++++++      ++++++|++|+|+++++
T Consensus        16 ~~~~~~~~~~~~~----~~~~--~~~~~-----~~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i   77 (330)
T TIGR01140        16 PEDWLDFSTGINP----LGPP--VPPIP-----ASAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAI   77 (330)
T ss_pred             hhheeEccccCCC----CCCC--hhhcc-----hHHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence            6789999999865    2322  11111     112457887665 99999999998      45789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++..+ .+| +|++++|+|..+...++..|++++.++         |++.+++.+. +++++++++|+||||.+++.+
T Consensus        78 ~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~  145 (330)
T TIGR01140        78 YLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPE  145 (330)
T ss_pred             HHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHH
Confidence            9987664 677 799999999999999999999988776         7888888884 577899999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++|+++|+++|++||+|++|.++.+..    ++..+ ...+++|+++|+||.|+++|+|+||+++++        +++
T Consensus       146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~~~  213 (330)
T TIGR01140       146 TLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------ALL  213 (330)
T ss_pred             HHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------HHH
Confidence            99999999999999999999999887532    22222 234689999999999999999999999853        477


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      +++...... ..++.++|.++.. +++++.|.
T Consensus       214 ~~l~~~~~~-~~~s~~~q~~~~~-~l~~~~~~  243 (330)
T TIGR01140       214 ARLREALGP-WTVNGPARAAGRA-ALADTAWQ  243 (330)
T ss_pred             HHHHhcCCC-CCchHHHHHHHHH-HHhchHHH
Confidence            777766543 3567889998888 54555553

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=227.73  Aligned_cols=227  Identities=25%  Similarity=0.434  Sum_probs=196.3

Q ss_pred             CCCCCCCcCCHHHHHHHHHHHhhhCC--CCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCC
Q 020968           80 FNCYSSTVGILPARRAIADYLNRDLP--YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHL  156 (319)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~  156 (319)
                      ...|.+..|.+++|+++|+++.+..|  ..++++++++++|+|.+++.+...|.+|||.-+++.|.|+++..-++ ..|+
T Consensus       114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv  193 (471)
T KOG0256|consen  114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV  193 (471)
T ss_pred             HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence            34688888999999999999988554  45688999999999999999999999999999999999999875554 6799


Q ss_pred             eEEEEeccCCCCCcCCHHHHHhhhc------cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC
Q 020968          157 EVRHFDLLPAKGWEVDLDAVEALAD------ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF  230 (319)
Q Consensus       157 ~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~  230 (319)
                      +++++.....++|+++.+.+|.++.      .+.+.++++||+||-|.+++++++..+++++.++|+.+|+||+|+.-+|
T Consensus       194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF  273 (471)
T KOG0256|consen  194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF  273 (471)
T ss_pred             eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence            9999999999999999999998874      2668999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccC-----CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHH
Q 020968          231 GNTPFVPMGVFG-----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSS  305 (319)
Q Consensus       231 ~~~~~~~~~~~~-----~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~  305 (319)
                      +..++.++.++.     ..+++-++.|+||-||+||+|+|.|...|+       .+....++..+. ..+|+..|..++.
T Consensus       274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------~VvsaA~kmssf-~~vSs~tQ~~la~  345 (471)
T KOG0256|consen  274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------DVVSAATKMSSF-GLVSSQTQYLLAS  345 (471)
T ss_pred             CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------HHHHHHHHHhhc-cCCcHHHHHHHHH
Confidence            988887766653     335788999999999999999999998764       366666555543 5679999999999


Q ss_pred             HHhccccccc
Q 020968          306 RKLKRNSFLK  315 (319)
Q Consensus       306 ~l~~~~~~~~  315 (319)
                       ++.++.|.+
T Consensus       346 -LLSD~~f~~  354 (471)
T KOG0256|consen  346 -LLSDEEFTR  354 (471)
T ss_pred             -HhchHHHHH
Confidence             766666654

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.96  E-value=8.5e-28  Score=218.49  Aligned_cols=250  Identities=31%  Similarity=0.524  Sum_probs=199.8

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL  127 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~  127 (319)
                      +||+.|++.    +...+.+..++...........|++..+..++++.+++++...++.....+++++++|+++++..++
T Consensus         1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~   76 (350)
T cd00609           1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL   76 (350)
T ss_pred             CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence            578888865    4556666666554222223457888889999999999999987766566789999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHH
Q 020968          128 TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQK  207 (319)
Q Consensus       128 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~  207 (319)
                      .++.++|++|+++.++|.++...++..|.+++.++.+.......+.+.++....++++++++++|+||||.+++.+++++
T Consensus        77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~  156 (350)
T cd00609          77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE  156 (350)
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999999865444333336666666778899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968          208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS  287 (319)
Q Consensus       208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  287 (319)
                      |+++|+++|+++|+|++|+.+.+.+.....+......+.+++++|++|.++.+|.|+||++++++       ++.+.++.
T Consensus       157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-------~~~~~~~~  229 (350)
T cd00609         157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLKK  229 (350)
T ss_pred             HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-------HHHHHHHH
Confidence            99999999999999999999877654432223344445689999999999889999999998542       47777776


Q ss_pred             hhhh-cCCcchHHHHHHHHHHh
Q 020968          288 FLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       288 ~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      .... ...++...|.++..++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~  251 (350)
T cd00609         230 LLPYTTSGPSTLSQAAAAAALD  251 (350)
T ss_pred             HHHhcccCCChHHHHHHHHHHh
Confidence            6553 45678888888777443

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.96  E-value=2.7e-28  Score=214.87  Aligned_cols=282  Identities=20%  Similarity=0.272  Sum_probs=206.8

Q ss_pred             CCCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHH------------------
Q 020968            8 NGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVD------------------   69 (319)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~------------------   69 (319)
                      |+-..++.++..-+..+.++++.+.. +..    ..+..+|+|+.|.|.... |+.-....+                  
T Consensus         4 ~~~dys~~ls~es~srk~~p~~~~~~-~~s----~~~i~~i~lagGlPnp~~-fp~~~~s~~p~~~~~~e~~~~~~~~~~   77 (472)
T KOG0634|consen    4 PPKDYSHHLSKESASRKLSPLRALGD-IKS----ASPISIISLAGGLPNPDY-FPIRSDSIKPQGSWKKENGKKLNNVTF   77 (472)
T ss_pred             CcccHHHHhcccccccccChHHHhhh-Hhh----cCCCceEEecCCCCCCCc-ccccccccccccCccccccccccceee
Confidence            45555555554444555566776654 322    224458999999765210 222211111                  


Q ss_pred             HHHHHhhc-----CCCCCCCCCcCCHHHHHHHHHHHh-hhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 020968           70 AIVHSVRS-----ARFNCYSSTVGILPARRAIADYLN-RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPG  143 (319)
Q Consensus        70 a~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~-~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~  143 (319)
                      ++.+....     ....+|++..|.++|...+.++.. ..+......=++++|+|.|.++..+++.++++||.|+++..+
T Consensus        78 ~~~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~t  157 (472)
T KOG0634|consen   78 AFENEASENTLPLSRALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYT  157 (472)
T ss_pred             eccccCCcccchhhhhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEeccc
Confidence            01111111     123589999999999999999665 222222223389999999999999999999999999999999


Q ss_pred             CcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---C-----ceEEEEcCC--CCccccccCHHHHHHHHHHHH
Q 020968          144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---N-----TVALVIINP--GNPCGNVYTYQHLQKIAETAK  213 (319)
Q Consensus       144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~-----~~~v~l~~p--~nptG~~~~~~~l~~i~~~~~  213 (319)
                      |++.....+..|+++++|+++.+   +++++.|++.+..   .     ..-|+.+.|  +||||..++.+..++|.++|+
T Consensus       158 y~~AL~s~~a~gv~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LAr  234 (472)
T KOG0634|consen  158 YPSALQSMEALGVKIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLAR  234 (472)
T ss_pred             chHHHHhccccCceEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHH
Confidence            99988999999999998888543   6899999998742   1     134555666  899999999999999999999


Q ss_pred             HcCCEEEEeCCCCCccCCC--------CC-----------CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968          214 KLGIMVIADEVYDHLAFGN--------TP-----------FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG  274 (319)
Q Consensus       214 ~~~~~li~D~a~~~~~~~~--------~~-----------~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~  274 (319)
                      +||++||+||.|..+.++.        .+           .+++.+.+.++|||...||||. .+||+|+||+.+++   
T Consensus       235 KyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~---  310 (472)
T KOG0634|consen  235 KYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS---  310 (472)
T ss_pred             HcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH---
Confidence            9999999999999988762        11           1233345667899999999999 59999999999864   


Q ss_pred             CccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          275 ILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       275 ~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                           .+++++.+..+. +.++|.+.|..+.+.+
T Consensus       311 -----~~l~ril~~ae~~t~~pSg~sq~iv~a~l  339 (472)
T KOG0634|consen  311 -----LFLKRILDLAEVATSGPSGFSQGIVYAML  339 (472)
T ss_pred             -----HHHHHHhhhcceeecCcccccHHHHHHHH
Confidence                 477888777764 6779999999988854

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.96  E-value=4.1e-28  Score=227.02  Aligned_cols=265  Identities=17%  Similarity=0.121  Sum_probs=195.9

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcH---HHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTAS---VAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~---~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +++.+.++.+..+.++..+ + +..+.++|+|+.|+|.  .++.+++   .+.+++.+++..+. ..|++..|.++||++
T Consensus        12 r~~~v~~~~~~~~~~~~~~-l-~~~g~~~~~L~~g~p~--~D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lrea   86 (460)
T PRK13238         12 RIKMVEPIRLTTREERERA-L-AEAGYNPFLLKSEDVF--IDLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDA   86 (460)
T ss_pred             eeceeccccccCHHHHHHH-H-HHcCCCEEeCCCCCCC--CCCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHH
Confidence            4556666666666654432 2 2347899999999984  1245544   57777777775544 479999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC------CCC
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA------KGW  169 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~  169 (319)
                      ++++++        .+++++|+|+++|+..++.+++++|| |++++|.|..|...+...|.+++.+++++.      ++|
T Consensus        87 ia~~~~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f  157 (460)
T PRK13238         87 VKDIFG--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPF  157 (460)
T ss_pred             HHHHhC--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccc
Confidence            999993        45799999999999999999999999 999999999999889999999999988642      345


Q ss_pred             c--CCHHHHHhhhcc----CceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCC--CccCCC-----CCC
Q 020968          170 E--VDLDAVEALADE----NTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYD--HLAFGN-----TPF  235 (319)
Q Consensus       170 ~--~d~~~l~~~l~~----~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~--~~~~~~-----~~~  235 (319)
                      .  +|+++|++.+.+    ++++|++++|+|||| .+++.+++++|.++|+++|++||+|+++.  ...|..     ...
T Consensus       158 ~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~  237 (460)
T PRK13238        158 KGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKD  237 (460)
T ss_pred             cCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccC
Confidence            4  999999999873    688999999999997 99999999999999999999999999763  233322     111


Q ss_pred             CCCcccCCCCCeEEEecCccccCCCccee-----e-EEEeeCCCCCccchHHHHHHHHhh----h--hcCCcchHHHHHH
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIVPGWRL-----G-WLVTSDPNGILQDSGIVDSIKSFL----N--ISSDPATFIQFLK  303 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~~G~r~-----G-~i~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~q~~~  303 (319)
                      .++..+     ++.++|++|.+.+.|+|+     | ++++++       +++.++++...    +  .+.+.+...|.++
T Consensus       238 ~si~~i-----~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Al  305 (460)
T PRK13238        238 KSIKEI-----AREMFSYADGLTMSAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEAL  305 (460)
T ss_pred             CCHHHH-----hhhhcccCcEEEEecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHH
Confidence            222111     233456666666666665     3 455443       35788877663    2  1233455568888


Q ss_pred             HHHHhc
Q 020968          304 SSRKLK  309 (319)
Q Consensus       304 ~~~l~~  309 (319)
                      +..+.+
T Consensus       306 a~~l~e  311 (460)
T PRK13238        306 AVGLYE  311 (460)
T ss_pred             HhhHHH
Confidence            875543

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.95  E-value=6.7e-26  Score=191.01  Aligned_cols=262  Identities=26%  Similarity=0.392  Sum_probs=194.8

Q ss_pred             ccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHH----HhhcC----CCCCCCCCcCCHHHHHHHH
Q 020968           26 ITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVH----SVRSA----RFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        26 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~----~~~~~----~~~~Y~~~~g~~~lr~~ia   97 (319)
                      ++|+++++++-..+   +.++.|.|+.|+|..      .|++.+.+++    .+.++    ...+|+.+.|...|.++++
T Consensus        14 sGi~~lMdDl~d~L---rt~g~imLggGNPa~------iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala   84 (417)
T COG3977          14 SGITQLMDDLNDGL---RTPGAIMLGGGNPAR------IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALA   84 (417)
T ss_pred             hhHHHHHHHHHhhc---cCCCceeeCCCCccc------ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHH
Confidence            57999998887766   456699999999863      3455554443    33332    2458999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC---CC--CEEEEc-CCCCcchHHHHhhCCCeEEE---EeccCCCC
Q 020968           98 DYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---PG--ANILLP-RPGFPYYEARATHSHLEVRH---FDLLPAKG  168 (319)
Q Consensus        98 ~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~---~g--d~Vl~~-~p~~~~~~~~~~~~g~~~~~---~~~~~~~~  168 (319)
                      .++++.+|+++..++|.+|+|++.+.+-++..+..   .|  .+|+.+ .|.|.+|..+.-.-.+=+..   ++..+.+-
T Consensus        85 ~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~  164 (417)
T COG3977          85 KMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQ  164 (417)
T ss_pred             HHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccc
Confidence            99999999999999999999999999988887742   34  466665 59998886554322211111   12222222


Q ss_pred             --CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc----C
Q 020968          169 --WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF----G  242 (319)
Q Consensus       169 --~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~  242 (319)
                        |.+|.+.+.  +.+++.+|+++.|.||||.+++.+|+.++..++++||+.+|+|.+|+.      +++.+-.-    .
T Consensus       165 FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~------PFP~iifsd~~~~  236 (417)
T COG3977         165 FKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV------PFPGIIFSDATPL  236 (417)
T ss_pred             eeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC------CCCceeccccccc
Confidence              566776655  346788999999999999999999999999999999999999999985      22222111    1


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      =.+|+|.|.|+||. |+||.|+|.+++.        +++++.+...... +..+.++.+..++. ++++.+..
T Consensus       237 w~~NiilC~SLSK~-GLPG~R~GIiIan--------e~viqaitnmn~iisLap~~~G~Aia~~-mie~gdl~  299 (417)
T COG3977         237 WNENIILCMSLSKL-GLPGSRCGIIIAN--------EKVIQAITNMNGIISLAPGRMGPAIAAE-MIESGDLL  299 (417)
T ss_pred             CCCCEEEEeehhhc-CCCCcceeEEEcc--------HHHHHHHHhccceeeecCCCccHHHHHH-HhhcchHH
Confidence            13689999999999 9999999999973        4688888877663 45667788887777 55554443

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.94  E-value=7e-26  Score=197.84  Aligned_cols=280  Identities=21%  Similarity=0.230  Sum_probs=212.0

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCC-CCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGD-PSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      ++...+++.|.++.+.+.+    .+.++.|||++|. .+.....+..+.+.+|-+..........|-|..|.+++++.++
T Consensus         4 ~i~~~p~DpIlgL~e~f~~----D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~   79 (396)
T COG1448           4 KIEAAPADPILGLKEAFKA----DPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQ   79 (396)
T ss_pred             ccccCCCCchhHHHHHHhc----CCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHH
Confidence            5667788899998887754    4588999999994 3333446778888888888777777778999999999999999


Q ss_pred             HHHhhhCCCC---CCCCcE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968           98 DYLNRDLPYK---LSPDDV--YLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE  170 (319)
Q Consensus        98 ~~~~~~~g~~---~~~~~i--~~~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  170 (319)
                      +++   +|..   +..+++  +=|.|||.|+..++..+.  .+..+|++++|+|+++..++...|+++..++..+..+-.
T Consensus        80 ~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~  156 (396)
T COG1448          80 KLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKG  156 (396)
T ss_pred             HHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecccccccc
Confidence            999   5433   444555  568999999999988774  356779999999999999999999999999987766667


Q ss_pred             CCHHHHHhhhcc--CceEEEEc-CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCcccC-CCC
Q 020968          171 VDLDAVEALADE--NTVALVII-NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFG-SIV  245 (319)
Q Consensus       171 ~d~~~l~~~l~~--~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~-~~~  245 (319)
                      +|.+.+...++.  ....|++- .+|||||.-++.++|++|+++.++++.+.+.|-||++|..+-.+.. .+..+. ...
T Consensus       157 ~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~  236 (396)
T COG1448         157 LDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGP  236 (396)
T ss_pred             ccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence            999988877753  22344333 4499999999999999999999999999999999999876532211 122221 223


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH----HHHh-hhhcCCcchHHHHHHHHHHhccc
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS----IKSF-LNISSDPATFIQFLKSSRKLKRN  311 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~q~~~~~~l~~~~  311 (319)
                      .+++..|+||.|++.|.|+|.+.+..++     .+...+    ++.. ++.+++||.-.-..++. +++++
T Consensus       237 ~~lva~S~SKnfgLYgERVGa~~vva~~-----~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~-IL~~p  301 (396)
T COG1448         237 ELLVASSFSKNFGLYGERVGALSVVAED-----AEEADRVLSQLKAIIRTNYSNPPAHGAAVVAT-ILNNP  301 (396)
T ss_pred             cEEEEehhhhhhhhhhhccceeEEEeCC-----HHHHHHHHHHHHHHHHhccCCCchhhHHHHHH-HhCCH
Confidence            4899999999999999999998654433     234444    3333 33466666666666666 55544

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.94  E-value=2e-25  Score=194.11  Aligned_cols=268  Identities=27%  Similarity=0.436  Sum_probs=207.4

Q ss_pred             HHHHHHHhhhc---CCCCeEeccCCCCCCCCC---------------------CCCcHHHHHHHHHHhhcC--CCCCCCC
Q 020968           32 LNSLLENLNKN---DTRPLIPLGHGDPSAFPS---------------------FRTASVAVDAIVHSVRSA--RFNCYSS   85 (319)
Q Consensus        32 ~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~---------------------~~~~~~~~~a~~~~~~~~--~~~~Y~~   85 (319)
                      ...+++.++++   +=+++|+-++|+|....+                     ...|..+++...+.+...  ....|+.
T Consensus        32 A~El~~eL~~~~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~Dai~RA~~~L~~~gGs~GaYS~  111 (475)
T KOG0258|consen   32 ADELEKELKKGVKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTDAIKRAKRILNDCGGSLGAYSD  111 (475)
T ss_pred             HHHHHHHHHhcccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcCCCCCCHHHHHHHHHHHHhcCCccccccc
Confidence            34455555543   234588888888742111                     123344444445555432  4568999


Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      +.|++-+|+.+|+|+.++.|...++++|++|.|++.|+..++..++ .+.+.|++|-|.|+-|...+..+|...+.+.++
T Consensus       112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLd  191 (475)
T KOG0258|consen  112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLD  191 (475)
T ss_pred             ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccceeec
Confidence            9999999999999999999988999999999999999999999886 467999999999999999999999999999999


Q ss_pred             CCCCCcCCHHHHHhhhcc-----CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCC
Q 020968          165 PAKGWEVDLDAVEALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPM  238 (319)
Q Consensus       165 ~~~~~~~d~~~l~~~l~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~  238 (319)
                      ++++|.+|.++|++.+++     +++++++.||.||||.+++.+.+++|+++|.+++++++-||+|++.+|.+. .++++
T Consensus       192 Ee~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSf  271 (475)
T KOG0258|consen  192 EESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSF  271 (475)
T ss_pred             cccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhH
Confidence            999999999999998754     568899999999999999999999999999999999999999999988653 55544


Q ss_pred             ccc----C----CCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHH
Q 020968          239 GVF----G----SIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS  304 (319)
Q Consensus       239 ~~~----~----~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~  304 (319)
                      ...    .    +...++.++|.||.+.. -|.|-||+-.-+-     .++....+.+..+...+++...|...-
T Consensus       272 KKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~-----~prv~~qi~Kl~si~lc~~V~GQ~~vd  341 (475)
T KOG0258|consen  272 KKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNR-----DPRVKQQIKKLASIKLCPQVSGQKLVD  341 (475)
T ss_pred             HHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccC-----ChhHHHHHHHHHhhhhcCCccchhhhc
Confidence            331    1    12236888999999866 6999999965432     245666666665543445555555443

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.93  E-value=1.2e-24  Score=201.10  Aligned_cols=223  Identities=16%  Similarity=0.161  Sum_probs=172.8

Q ss_pred             CCCCeEeccCCCC--CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDP--SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+-+++.|..+++  +......+ ..+.++...++..+. ..|+++.|..+||+++++++        ..+++++|+|++
T Consensus         9 ~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~--------g~~~vv~t~~Gt   78 (431)
T cd00617           9 AGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF--------GFKHIIPTHQGR   78 (431)
T ss_pred             cCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH--------CCCeEEEcCCHH
Confidence            4889999999998  53222222 355555555554443 36999999999999999999        346899999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC--------CcCCHHHHHhhhccC----ceEEE
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG--------WEVDLDAVEALADEN----TVALV  188 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~d~~~l~~~l~~~----~~~v~  188 (319)
                      +|+..++.+++++||.| +++|.|..+...+...|.+++.+++++..+        +.+|+++|++++.++    +++|+
T Consensus        79 ~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~  157 (431)
T cd00617          79 GAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIV  157 (431)
T ss_pred             HHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEE
Confidence            99999999999999987 689999999989999999999999875432        449999999999765    67899


Q ss_pred             EcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCC--ccC-----CCCCCCCCcccCCCCCeEEEecCccccCCC
Q 020968          189 IINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH--LAF-----GNTPFVPMGVFGSIVPVLTLGSISKRWIVP  260 (319)
Q Consensus       189 l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~--~~~-----~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~  260 (319)
                      +++|+||+ |.+++.+++++|.++|+++|++||+|++...  ..+     ++....++.     +.++.++|++|.+.+.
T Consensus       158 v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~-----ei~~e~~s~sd~~~mS  232 (431)
T cd00617         158 LTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA-----EIAREMFSYADGCTMS  232 (431)
T ss_pred             EECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH-----HHHHHhhccCCEEEEE
Confidence            99999998 9999999999999999999999999999542  222     121122222     1134567788888778


Q ss_pred             cce------eeEEEeeCCCCCccchHHHHHHHHh
Q 020968          261 GWR------LGWLVTSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       261 G~r------~G~i~~~~~~~~~~~~~~~~~~~~~  288 (319)
                      |+|      .||++++++       ++.++++.+
T Consensus       233 ~~K~~~~~~GG~i~~~d~-------~l~~~~~~~  259 (431)
T cd00617         233 AKKDGLVNIGGFLALRDD-------ELYEEARQR  259 (431)
T ss_pred             eecCCCCccceEEEeCcH-------HHHHHHHHh
Confidence            777      568888652       477877754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.92  E-value=3e-23  Score=192.27  Aligned_cols=213  Identities=16%  Similarity=0.153  Sum_probs=162.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc---CC----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV---GI----LPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      .+.++|+|+.|++   +.+..+|.+.+++.+++..... .|++..   |.    .++|+++|++++        .+++++
T Consensus        36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~-~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii  103 (393)
T TIGR01822        36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGF-GMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL  103 (393)
T ss_pred             CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCC-CCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence            4678999999984   3478889999999998876332 565554   65    788999998883        357888


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEE
Q 020968          116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVI  189 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l  189 (319)
                      ++|+++|+..++.+++++||.|+++.|.|+.+...++..+.+...+.       ..|++++++.+++      ++++|++
T Consensus       104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~  176 (393)
T TIGR01822       104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT  176 (393)
T ss_pred             ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence            89999999999999999999999999999998888887777664432       3689999888764      6678888


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      .+++||||.+.+   +++|+++|+++|+++|+|++|+....+..  ......... .+..++++|+||++  +|+|+||+
T Consensus       177 ~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~  250 (393)
T TIGR01822       177 DGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFT  250 (393)
T ss_pred             eCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEE
Confidence            889999999955   89999999999999999999964332211  111111111 13469999999985  57899999


Q ss_pred             EeeCCCCCccchHHHHHHHHh
Q 020968          268 VTSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~  288 (319)
                      +++.        ++++.++..
T Consensus       251 ~~~~--------~~~~~l~~~  263 (393)
T TIGR01822       251 TARK--------EVVELLRQR  263 (393)
T ss_pred             EeCH--------HHHHHHHHh
Confidence            8753        477777654

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK07049 methionine gamma-lyase; Validated

Probab=99.91  E-value=9.6e-23  Score=189.61  Aligned_cols=194  Identities=15%  Similarity=0.183  Sum_probs=151.6

Q ss_pred             CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCC
Q 020968           81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHL  156 (319)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~  156 (319)
                      .+|+ ++....|++.+|++.        ..+++++++|+++|+..++.+++++||+|+++.|.|..+...+    ...|+
T Consensus        78 ~R~~-~Pt~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi  148 (427)
T PRK07049         78 SRFN-HPNSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV  148 (427)
T ss_pred             cCCC-CcCHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence            4555 345689999999998        3457999999999999999999999999999999999986653    56788


Q ss_pred             eEEEEeccCCCCCcCCHHHHHhhhc-----cCceEEEEcCCCCccccccCHHHHHHHHHHHHH---cCCEEEEeCCCCCc
Q 020968          157 EVRHFDLLPAKGWEVDLDAVEALAD-----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKK---LGIMVIADEVYDHL  228 (319)
Q Consensus       157 ~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~D~a~~~~  228 (319)
                      +++.++.      ..|++.+++.+.     +++++|++++|+||||.+++.+++.++++.|+.   +++++|+|++|...
T Consensus       149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~  222 (427)
T PRK07049        149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP  222 (427)
T ss_pred             EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence            8666652      246777776653     468999999999999999999999999888654   68999999998764


Q ss_pred             cCCCCCCCCCcccCCCCCeEEEecCccccC-CCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          229 AFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                      ...    .++    ..+..|++.|+||.++ .+|+|+||++++.        +++++++..+.. ....+++.|+++..
T Consensus       223 ~~~----~pl----~~g~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r  285 (427)
T PRK07049        223 VFQ----KPL----EHGADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR  285 (427)
T ss_pred             ccC----Ccc----ccCCCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence            321    122    1134599999999999 5999999999743        577777776654 45678888887665

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.91  E-value=2.3e-23  Score=189.03  Aligned_cols=221  Identities=14%  Similarity=0.120  Sum_probs=161.3

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP  140 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~  140 (319)
                      +++++.+++++.+.....  ..|++.....++++.+++++      +  ++++++++|+++++..++.+++++||+|+++
T Consensus         8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~   77 (338)
T cd06502           8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVICH   77 (338)
T ss_pred             CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence            478899999998765432  25766667788888888887      2  5678888888999999999999999999999


Q ss_pred             CCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEEEcCCCCccccccCHHHHHHHHH
Q 020968          141 RPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVIINPGNPCGNVYTYQHLQKIAE  210 (319)
Q Consensus       141 ~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~~p~nptG~~~~~~~l~~i~~  210 (319)
                      .|+|..+..   .+...|++++.++.+   .+.+|++++++++++       ++++|++++|+|| |.+++.+++++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~  153 (338)
T cd06502          78 ETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA  153 (338)
T ss_pred             cCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence            999976432   345689998888763   257999999999864       6789999999997 66779999999999


Q ss_pred             HHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       211 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      +|+++|+++|+|++|..+....... ++........ +++.|+||+|+++|   |+++..+       ++++++++....
T Consensus       154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~~~  221 (338)
T cd06502         154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRRRK  221 (338)
T ss_pred             HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHHHH
Confidence            9999999999999986432111111 2222212222 56889999999887   5554333       257777776543


Q ss_pred             h---cCCcchHHHHHHHHHH
Q 020968          291 I---SSDPATFIQFLKSSRK  307 (319)
Q Consensus       291 ~---~~~~~~~~q~~~~~~l  307 (319)
                      .   ....+.+.|.++..++
T Consensus       222 ~~~~~~~~~~~~~~a~~~~L  241 (338)
T cd06502         222 QAGGGMRQSGFLAAAGLAAL  241 (338)
T ss_pred             HhCCChhhHHHHHHHHHHHh
Confidence            2   2234556666665533

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.91  E-value=1.3e-22  Score=188.09  Aligned_cols=218  Identities=14%  Similarity=0.094  Sum_probs=162.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+.++|+|+.|++   +.++.++.+.+++.+.+.....  ..|....|..++++++++++.+.+|.   +++|++|+| +
T Consensus        40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~  112 (397)
T PRK06939         40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F  112 (397)
T ss_pred             CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence            4678999999973   2267889999999988765322  12222457888899998888887663   367888887 7


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCC
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGN  194 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~n  194 (319)
                      +++..++++++++||.|++++|+|+.+...++..|.+++.++.       .|++.+++.+++      ++++|+..+.+|
T Consensus       113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~  185 (397)
T PRK06939        113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS  185 (397)
T ss_pred             HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence            7888899999999999999999999998888888988876653       478888887753      556677666789


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ++|..   .++++|.++|+++|++||+||+|....++  +........+. .+.+++++|+||++  +|+|+||++++. 
T Consensus       186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~--~g~r~G~v~~~~-  258 (397)
T PRK06939        186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKAL--GGASGGYTAGRK-  258 (397)
T ss_pred             CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHh--CccCceEEEeCH-
Confidence            99987   56999999999999999999999632222  11111111121 13469999999997  356999999853 


Q ss_pred             CCCccchHHHHHHHHh
Q 020968          273 NGILQDSGIVDSIKSF  288 (319)
Q Consensus       273 ~~~~~~~~~~~~~~~~  288 (319)
                             ++++.++..
T Consensus       259 -------~~~~~l~~~  267 (397)
T PRK06939        259 -------EVIDWLRQR  267 (397)
T ss_pred             -------HHHHHHHHh
Confidence                   477777654

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.91  E-value=2.1e-22  Score=186.10  Aligned_cols=236  Identities=14%  Similarity=0.162  Sum_probs=174.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+.++++|+.|++   +.+++++.+.+++.+++....  ...|....|..++++++++++.+..|.   ++.+++++| +
T Consensus        31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~  103 (385)
T TIGR01825        31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-F  103 (385)
T ss_pred             CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-H
Confidence            4678999999863   236788999999998876432  335767778999999999999887662   456777777 5


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCCCcc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPC  196 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~npt  196 (319)
                      +++..++.+++++||.|+++.|.|..+...+...|.++..++       .+|++++++.+.+    +++++++.+++|||
T Consensus       104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t  176 (385)
T TIGR01825       104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMD  176 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence            667788888899999999999999998877778888776543       3688888887653    56788888889999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCC--cccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM--GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG  274 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~  274 (319)
                      |.+.+   +++|.++|+++|+++|+||+|..+.++.......  ..+. .+.++++.|+||+++++|   ||++++.   
T Consensus       177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~---  246 (385)
T TIGR01825       177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK---  246 (385)
T ss_pred             CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH---
Confidence            99866   8899999999999999999998765542111111  1122 356899999999997766   9988743   


Q ss_pred             CccchHHHHHHHHhhh-h--cCCcchHHHHHHHHHH
Q 020968          275 ILQDSGIVDSIKSFLN-I--SSDPATFIQFLKSSRK  307 (319)
Q Consensus       275 ~~~~~~~~~~~~~~~~-~--~~~~~~~~q~~~~~~l  307 (319)
                           ++++.+..... .  ....++..|.++..++
T Consensus       247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al  277 (385)
T TIGR01825       247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAV  277 (385)
T ss_pred             -----HHHHHHHHhCccccccCCCCHHHHHHHHHHH
Confidence                 46777765432 1  2234556666655544

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.91  E-value=2.2e-22  Score=182.51  Aligned_cols=214  Identities=15%  Similarity=0.106  Sum_probs=156.2

Q ss_pred             CCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968           59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL  138 (319)
Q Consensus        59 ~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl  138 (319)
                      ..+.-.|.+.++..+.++...    ++...+.+|++.+|+++      +++++++++++|+++++..++.+++++||+|+
T Consensus        30 lgl~~~~~~~~~~~~~~~~~~----g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl   99 (346)
T TIGR03576        30 TGLAGGFKIDEEDLELLETYV----GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKVV   99 (346)
T ss_pred             ccCCCChhHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence            334556778888877765421    22234566777777776      34678999999999999999999999999999


Q ss_pred             Ec---CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          139 LP---RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       139 ~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      ++   .|.|..|...++..|.++..+         .+++.++.  .+++++|+++ +++++|.+++.+++++|+++|+++
T Consensus       100 i~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~  167 (346)
T TIGR03576       100 HYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK  167 (346)
T ss_pred             ECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc
Confidence            75   478988989999999876322         24444433  2356777774 578999999999999999999999


Q ss_pred             CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCC
Q 020968          216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSD  294 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~  294 (319)
                      |+++++||+|+.+..+.....+...+.   ..+++.|+||  +++|+|+||++++.        ++++.++..... ..+
T Consensus       168 ~~~livDEAy~~~~~~~~~~~~~~~~~---~divv~s~SK--alaG~r~G~v~~~~--------~li~~l~~~~~~~~~s  234 (346)
T TIGR03576       168 EAIVLVDDASGARVRRLYGQPPALDLG---ADLVVTSTDK--LMDGPRGGLLAGRK--------ELVDKIKSVGEQFGLE  234 (346)
T ss_pred             CCEEEEECCccccccccCCCCCHHHcC---CcEEEeccch--hccccceEEEEeCH--------HHHHHHHHhhcCcccC
Confidence            999999999998653211111222222   2267789999  48999999999853        588888877653 334


Q ss_pred             cchHHHHHHHHHH
Q 020968          295 PATFIQFLKSSRK  307 (319)
Q Consensus       295 ~~~~~q~~~~~~l  307 (319)
                      .+++.|.++..++
T Consensus       235 ~~~~~~~aa~~aL  247 (346)
T TIGR03576       235 AQAPLLAAVVRAL  247 (346)
T ss_pred             ccHHHHHHHHHHH
Confidence            5777887777655

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.91  E-value=2.3e-22  Score=183.89  Aligned_cols=214  Identities=14%  Similarity=0.152  Sum_probs=157.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCc----CCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTV----GILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~----g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .+..+|+|+.|+|-   .++.++.+.+++.+++.....  ..|....    ...++++++++++.       .++.++++
T Consensus        14 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~   83 (360)
T TIGR00858        14 DGRRLLNFSSNDYL---GLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS   83 (360)
T ss_pred             CCceEEecccCCcc---cCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            47789999999641   245678999999988765221  1122122    34457777777762       24677777


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCC
Q 020968          117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINP  192 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p  192 (319)
                      +|+ +++..++.+++++||+|+++.|+|..+...++..|.++..++.       +|++.+++.++.    +++++++.++
T Consensus        84 ~G~-~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~  155 (360)
T TIGR00858        84 SGY-LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV  155 (360)
T ss_pred             chH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence            775 4455577888899999999999999998888999998877653       588889888764    3577888888


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC--CCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF--VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      +||+|...+   +++|.++|+++|+++|+||+|..+.++....  .....+...+++|+++|+||+|+++|   ||++++
T Consensus       156 ~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~  229 (360)
T TIGR00858       156 FSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS  229 (360)
T ss_pred             ccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence            999998854   8999999999999999999998765543211  22222334567899999999998877   999875


Q ss_pred             CCCCCccchHHHHHHHHh
Q 020968          271 DPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~  288 (319)
                      .        ++++.++..
T Consensus       230 ~--------~~~~~~~~~  239 (360)
T TIGR00858       230 Q--------ALIDYLINR  239 (360)
T ss_pred             H--------HHHHHHHHh
Confidence            3        466666543

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.90  E-value=5.1e-22  Score=184.49  Aligned_cols=202  Identities=18%  Similarity=0.180  Sum_probs=156.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCC-------CcCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSS-------TVGILPARRAIADYLNRDLPYKL-SPDDVYL  115 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~-------~~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~  115 (319)
                      ++.+.|+.+..+     ++++.+.+++.+.+...... ..+.       ...++++|+.+++++      +. ++++|++
T Consensus        18 ~~~~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~   86 (401)
T PRK10874         18 DAGVYLDSAATA-----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW   86 (401)
T ss_pred             CceEEEeCCccc-----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence            468999999854     56788999998887542110 0000       112567888888887      34 6789999


Q ss_pred             eCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          116 TLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      |+|++++++++++++    .++||+|+++++.|++    +...++..|.+++.++.+.  ++.+|++++++.++++++++
T Consensus        87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv  164 (401)
T PRK10874         87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL  164 (401)
T ss_pred             ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence            999999999999998    3789999999999864    4566788899999998753  46789999999998899999


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      ++++|+||||.+++   +++|+++|+++|+++++|++|....+    +..+...   +..+++.|++|.|+.+|  +||+
T Consensus       165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l  232 (401)
T PRK10874        165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQAL---DIDFYAFSGHKLYGPTG--IGVL  232 (401)
T ss_pred             EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhc---CCCEEEEecccccCCCc--cEEE
Confidence            99999999999976   78999999999999999999965222    2223222   23488899999987777  5888


Q ss_pred             EeeC
Q 020968          268 VTSD  271 (319)
Q Consensus       268 ~~~~  271 (319)
                      ++++
T Consensus       233 ~~~~  236 (401)
T PRK10874        233 YGKS  236 (401)
T ss_pred             EEch
Confidence            8743

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.90  E-value=2.5e-22  Score=186.36  Aligned_cols=203  Identities=17%  Similarity=0.162  Sum_probs=156.7

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCC-------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      ++++.|+.+.-+     ++|+.+.+++.+.+..... ..++..       ...+++|+.++++++.    . ++++|++|
T Consensus        15 ~~~iyld~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~----~-~~~~i~~t   84 (398)
T TIGR03392        15 DGTVYLDSAATA-----LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNA----P-DAENIVWT   84 (398)
T ss_pred             CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC----C-CCCeEEEe
Confidence            468999999855     5678899999887653211 112221       1245788888888832    1 46899999


Q ss_pred             CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968          117 LGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       117 ~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      +|++++++.++.++    .++||+|++++|.|++    +...++..|++++.++.+.  ++.+|++.+++++++++++++
T Consensus        85 ~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv~  162 (398)
T TIGR03392        85 RGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRILA  162 (398)
T ss_pred             CChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEEE
Confidence            99999999999988    4789999999999865    4556788999999998753  356899999999988899999


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +++|+||||.+.+   +++|+++|+++|+++++|++|+...+    +..+....   ..+++.|++|.++.+|  +||++
T Consensus       163 i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l~  230 (398)
T TIGR03392       163 LGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALD---IDFYAFSGHKLYGPTG--IGVLY  230 (398)
T ss_pred             EECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcC---CCEEEEecccccCCCc--eEEEE
Confidence            9999999999976   78899999999999999999975322    22222222   2378889999887666  89998


Q ss_pred             eeC
Q 020968          269 TSD  271 (319)
Q Consensus       269 ~~~  271 (319)
                      +++
T Consensus       231 ~~~  233 (398)
T TIGR03392       231 GKT  233 (398)
T ss_pred             EcH
Confidence            753

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.90  E-value=2.6e-22  Score=183.83  Aligned_cols=202  Identities=15%  Similarity=0.138  Sum_probs=155.4

Q ss_pred             CCCcHHHHHHHHHHhhcCCC-------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC
Q 020968           61 FRTASVAVDAIVHSVRSARF-------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP  133 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~  133 (319)
                      -+..+++.+++.+.......       ..+...+-..++++.+++++      ++  +++++++|+++++..++.+++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~   82 (361)
T cd06452          11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK   82 (361)
T ss_pred             CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence            46778888988887632110       01111224568888888887      23  78999999999999999999999


Q ss_pred             CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-------cCceEEEEcCCCCccccccCHHHHH
Q 020968          134 GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------ENTVALVIINPGNPCGNVYTYQHLQ  206 (319)
Q Consensus       134 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~v~l~~p~nptG~~~~~~~l~  206 (319)
                      ||+|+++.+.|......++..|++++.++.+...+|.+|++.++++++       ++++++++++|+||||..   .+++
T Consensus        83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~  159 (361)
T cd06452          83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK  159 (361)
T ss_pred             CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence            999999999887766778999999999998765557899999998885       267899999999999998   5588


Q ss_pred             HHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH
Q 020968          207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK  286 (319)
Q Consensus       207 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~  286 (319)
                      +|.++|+++|+++|+|++|....    .+.....+   +..++++|+||+++. +.|+||+++++        +++++++
T Consensus       160 ~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~d~~~~s~~K~l~~-~~~~G~l~~~~--------~~~~~l~  223 (361)
T cd06452         160 KIAKVCHEYGVPLLLNGAYTVGR----MPVSGKEL---GADFIVGSGHKSMAA-SAPIGVLATTE--------EWADIVF  223 (361)
T ss_pred             HHHHHHHHcCCeEEEECCcccCC----cCCCHHHc---CCCEEEecCCccccC-CCCeEEEEECH--------HHHHHHh
Confidence            99999999999999999998521    11122222   235999999999864 55999999853        4677765


Q ss_pred             Hhh
Q 020968          287 SFL  289 (319)
Q Consensus       287 ~~~  289 (319)
                      ...
T Consensus       224 ~~~  226 (361)
T cd06452         224 RTS  226 (361)
T ss_pred             ccc
Confidence            543

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PLN02242 methionine gamma-lyase

Probab=99.89  E-value=4.2e-22  Score=184.70  Aligned_cols=185  Identities=18%  Similarity=0.212  Sum_probs=145.1

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-----hhCCCeEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA-----THSHLEVRH  160 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~  160 (319)
                      ++...+|++.+++++        ..+.+++++|+++|+..++.+++++||+|+++.|.|..+...+     +..|.++..
T Consensus        75 ~Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~  146 (418)
T PLN02242         75 NPTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF  146 (418)
T ss_pred             ChhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence            456789999999988        4567889999999999999999999999999999998876554     346777766


Q ss_pred             EeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc
Q 020968          161 FDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       161 ~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                      ++.       .|++.+++++++ ++++|++++|+||||.+.   ++++|+++|+++|++||+|++|..+.++.      .
T Consensus       147 ~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~------~  210 (418)
T PLN02242        147 VDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP------A  210 (418)
T ss_pred             cCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH------H
Confidence            654       389999999987 489999999999999996   48999999999999999999998765421      1


Q ss_pred             ccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhh---hcCCcchHHHHHHHH
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQFLKSS  305 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~  305 (319)
                      .+   +..|+++|+||.++++|+++ ||++++.        +++++++..+.   ...+++...|.+...
T Consensus       211 ~~---g~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~  269 (418)
T PLN02242        211 RL---GADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFEL  269 (418)
T ss_pred             Hc---CCcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHH
Confidence            11   24599999999999999885 8888643        47777775533   123445556655544

>PLN02822 serine palmitoyltransferase

Probab=99.89  E-value=7.3e-22  Score=186.41  Aligned_cols=240  Identities=13%  Similarity=0.118  Sum_probs=171.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .+.+++||+.+++-   .+..++.+.+++.++++....      ..|++..++.+|++++++++.       .++.|+++
T Consensus       107 ~G~~~id~~s~~~l---gl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s  176 (481)
T PLN02822        107 NGKDVVNFASANYL---GLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS  176 (481)
T ss_pred             CCceEEEeECCCcC---CCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            46789999999753   366789999999999876322      135666678999999999983       35678888


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh--ccCc-eEEEEcCCC
Q 020968          117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENT-VALVIINPG  193 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~-~~v~l~~p~  193 (319)
                      +|.+ ++..++.+++++||.|++....|..+...+...+.+++.++.++.+++..+++++++..  .+++ ++|++..++
T Consensus       177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~  255 (481)
T PLN02822        177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY  255 (481)
T ss_pred             CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence            8776 67889999999999999988888777778888888888887643323333333333221  1234 677888889


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc--ccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG--VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +++|.+++   +++|+++|++||+++|+||+|+...++........  .+...+..|++.||||+|+++|   ||++++.
T Consensus       256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~  329 (481)
T PLN02822        256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA  329 (481)
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH
Confidence            99999987   89999999999999999999997666532211111  1112245699999999999888   9999753


Q ss_pred             CCCCccchHHHHHHHHhhh-h-cC-CcchHHHHHHHHHH
Q 020968          272 PNGILQDSGIVDSIKSFLN-I-SS-DPATFIQFLKSSRK  307 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~q~~~~~~l  307 (319)
                              ++++.++.... . ++ +.++..|.++..++
T Consensus       330 --------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL  360 (481)
T PLN02822        330 --------RVVDHQRLSSSGYVFSASLPPYLASAAITAI  360 (481)
T ss_pred             --------HHHHHHHhcCCceeeccccCHHHHHHHHHHH
Confidence                    47777664332 2 22 23466666655544

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.89  E-value=1.9e-21  Score=180.98  Aligned_cols=203  Identities=22%  Similarity=0.242  Sum_probs=155.7

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC-C-------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-S-------TVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~-------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .+++.|+.+.-.     ++++.+.+++.+.+.....+... .       ....+++|+.++++++.     .++++|++|
T Consensus        22 ~~~iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t   91 (406)
T PRK09295         22 LPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV   91 (406)
T ss_pred             CceEEEeCcccc-----cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence            368999999854     67788999998887642211111 1       01245788888888732     156899999


Q ss_pred             CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968          117 LGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       117 ~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      +|++++++.++.++    +++||+|+++++.|++    +...++..|++++.++.+.  ++.+|++++++++++++++++
T Consensus        92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~  169 (406)
T PRK09295         92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA  169 (406)
T ss_pred             CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence            99999999999874    5789999999988764    4556678899999998753  456899999999988899999


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +++|+||||.+++   +++|+++|+++|+++++|++|+...    .+..+...   +..+++.|++|.++.+|  +||++
T Consensus       170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~  237 (406)
T PRK09295        170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGILY  237 (406)
T ss_pred             EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhc---CCCEEEeehhhccCCCC--cEEEE
Confidence            9999999999977   7889999999999999999997632    22333322   23488899999877666  79998


Q ss_pred             eeC
Q 020968          269 TSD  271 (319)
Q Consensus       269 ~~~  271 (319)
                      +++
T Consensus       238 ~~~  240 (406)
T PRK09295        238 VKE  240 (406)
T ss_pred             Ech
Confidence            754

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.89  E-value=8.8e-22  Score=182.13  Aligned_cols=169  Identities=17%  Similarity=0.191  Sum_probs=137.8

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEE
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRH  160 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~  160 (319)
                      +.++..+|++++++++.        .+++++++|+++|+..++.+++++||+|+++.|.|..+..    .++..|+++..
T Consensus        62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~  133 (400)
T PRK06234         62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF  133 (400)
T ss_pred             CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence            55688999999999983        3468899999999999999999999999999999976443    34678988888


Q ss_pred             EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCC
Q 020968          161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPM  238 (319)
Q Consensus       161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~  238 (319)
                      ++.       .|++++++++++++++|++++|+||||.+.+   +++|.++|+++  |+++|+|++|....+..    ++
T Consensus       134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~----~l  199 (400)
T PRK06234        134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR----PL  199 (400)
T ss_pred             ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC----ch
Confidence            875       2889999999888999999999999999976   88888889886  99999999998765421    22


Q ss_pred             cccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHH
Q 020968          239 GVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKS  287 (319)
Q Consensus       239 ~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~  287 (319)
                      . .   +..|++.|+||.++++|+|+ ||+++++        +++++++.
T Consensus       200 ~-~---g~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~  237 (400)
T PRK06234        200 Q-L---GADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKL  237 (400)
T ss_pred             h-h---CCcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHH
Confidence            1 1   33499999999999999876 8888753        46666654

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.89  E-value=1.6e-22  Score=167.62  Aligned_cols=228  Identities=19%  Similarity=0.311  Sum_probs=173.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +++++.++..+...   .|.|..+ + +.        ..|+. .-..+++.++++-      -++.+++|+++-|+-+.|
T Consensus        40 G~~iv~ld~~e~~r---yPdP~q~-e-fk--------~~~~d-~rnk~ls~a~~~d------kpLt~dnic~GvGsDE~I   99 (375)
T KOG0633|consen   40 GRDIVKLDANENPR---YPDPEQM-E-FK--------YVYPD-PRNKRLSDALAQD------KPLTSDNICVGVGSDELI   99 (375)
T ss_pred             CCCceEeccccCCC---CcCHHHc-c-cc--------cccCC-cccchhhhhcccC------CCCCccceEEecCcHHHH
Confidence            77899998887543   2333331 1 11        12332 2335666665543      167899999999999999


Q ss_pred             HHHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcCCCCcccccc
Q 020968          124 EVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       124 ~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~~  200 (319)
                      .++++..+.|| ++|+.-.|+|.-|...+.-.+++++.++..+  +|.++.+.+.+.++  +.++.+++++|+||||..+
T Consensus       100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~i  177 (375)
T KOG0633|consen  100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSII  177 (375)
T ss_pred             HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccc
Confidence            99999999999 9999999999988888888999999999865  68899999999875  4678999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                      ..+++++|.+--.  |.++++||+|.+|...+   ..+.....++|+++++++||+||++|+|+||...+-        .
T Consensus       178 k~~di~KiLe~p~--nglVVvDEAYidFsg~~---S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~--------~  244 (375)
T KOG0633|consen  178 KEDDILKILEMPD--NGLVVVDEAYIDFSGVE---SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPL--------S  244 (375)
T ss_pred             cHHHHHHHHhCCC--CcEEEEeeeeEeecccc---ccchHhHhCCceeehhhhhhhcCcceeEeecccccH--------H
Confidence            9999998887543  89999999999987533   234445677899999999999999999999998864        3


Q ss_pred             HHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          281 IVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      +..-+.+....+ +.|.....++..++
T Consensus       245 ia~iln~~KaPY-NiS~~~s~~AL~Al  270 (375)
T KOG0633|consen  245 IAEILNRAKAPY-NISVAGSVAALAAL  270 (375)
T ss_pred             HHHHHHhccCCc-cccchhHHHHHHhc
Confidence            555566655543 33444443333334

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.89  E-value=5.3e-21  Score=176.56  Aligned_cols=218  Identities=19%  Similarity=0.206  Sum_probs=152.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+.++|+|+.+++   ..+.++|.+.+++.+++....  ...|....|...+++.+++.+.+.++   . ++.+++++++
T Consensus        37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~-~~~i~~~~g~  109 (385)
T PRK05958         37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---A-ERALLFSSGY  109 (385)
T ss_pred             CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---C-CcEEEECcHH
Confidence            5788999999863   225567899999998876522  11222222333444444444444333   2 3445555566


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCG  197 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG  197 (319)
                      +++..++..++++||.|+++.|.|..+...+...|.+++.++.       .|++.+++.+++   .+.++++.+++|++|
T Consensus       110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G  182 (385)
T PRK05958        110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG  182 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence            6777777888999999999999999998888888988887764       388899988864   245566667899999


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCC
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI  275 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~  275 (319)
                      ...+   +++|+++|+++|+++|+||+|+...++  +........+...+++|++.|+||+|+.+|   ||++++.    
T Consensus       183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~----  252 (385)
T PRK05958        183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE----  252 (385)
T ss_pred             CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH----
Confidence            8844   899999999999999999999765443  222222122334467899999999998877   8988753    


Q ss_pred             ccchHHHHHHHHh
Q 020968          276 LQDSGIVDSIKSF  288 (319)
Q Consensus       276 ~~~~~~~~~~~~~  288 (319)
                          ++.+.+...
T Consensus       253 ----~~~~~~~~~  261 (385)
T PRK05958        253 ----TLIDYLINR  261 (385)
T ss_pred             ----HHHHHHHHh
Confidence                466665543

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.89  E-value=6.2e-21  Score=175.25  Aligned_cols=201  Identities=16%  Similarity=0.148  Sum_probs=150.1

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCC-C------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Q 020968           62 RTASVAVDAIVHSVRSARFNCYS-S------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG  134 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~-~------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~g  134 (319)
                      .+.....+++.+.-......++. .      .+-+.++++.+|+++        ..+.+++++|+++++..++.+++++|
T Consensus        19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~--------g~~~~~i~~g~~~a~~~~~~~l~~~g   90 (370)
T TIGR02539        19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL--------GMDEARVTHGAREGKFAVMHALCKEG   90 (370)
T ss_pred             CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh--------CCCceEEECChHHHHHHHHHHhhCCC
Confidence            45677777777664321111110 0      112467788888888        23467789999999999999999999


Q ss_pred             CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEEEcCCCCccccccCHHHHHH
Q 020968          135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVIINPGNPCGNVYTYQHLQK  207 (319)
Q Consensus       135 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~~p~nptG~~~~~~~l~~  207 (319)
                      |+|++..+.|.+....++..|++++.++.+.+.++.+|++++++.+++       ++++|++++|+||+|...+   +++
T Consensus        91 d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~  167 (370)
T TIGR02539        91 DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGK  167 (370)
T ss_pred             CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHH
Confidence            999999888766557788999999999976555688999999998853       5689999999999999855   888


Q ss_pred             HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968          208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS  287 (319)
Q Consensus       208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  287 (319)
                      |+++|+++|+++|+|++|.....    .......   +..++++|+||+++ +|.|+||++++.        ++++.++.
T Consensus       168 i~~la~~~~~~livDea~~~g~~----~~~~~~~---~~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~~  231 (370)
T TIGR02539       168 VAKVCREKGVPLLLNCAYTVGRM----PVSAKEI---GADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVLR  231 (370)
T ss_pred             HHHHHHHcCCeEEEECccccCCc----CCCHHHc---CCCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhcc
Confidence            88999999999999999987321    1111111   23477799999987 567899999853        47777665


Q ss_pred             hh
Q 020968          288 FL  289 (319)
Q Consensus       288 ~~  289 (319)
                      ..
T Consensus       232 ~~  233 (370)
T TIGR02539       232 KS  233 (370)
T ss_pred             cc
Confidence            44

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.88  E-value=3.9e-21  Score=178.35  Aligned_cols=200  Identities=19%  Similarity=0.222  Sum_probs=152.5

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC---CCCCCCcC----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYSSTVG----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      ++.|+.+.+.     ++++.+.+++.+.+.....   ..|....+    .+++|+.++++++      .++++|++++|+
T Consensus        18 ~~yl~~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~   86 (397)
T TIGR01976        18 RVFFDNPAGT-----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANA   86 (397)
T ss_pred             eEEecCCccC-----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCH
Confidence            7999998865     6788899999888754321   23443323    3577777777773      355679999999


Q ss_pred             HHHHHHHHHHh---cCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          120 TQAIEVILTVL---ARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       120 t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      +++++.++.++   .++||+|++..+.|.+.    ...++..|+++..++.+.+ ++.+|++++++.++++++++++++|
T Consensus        87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~  165 (397)
T TIGR01976        87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA  165 (397)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence            99998887775   57999999999988653    3456778999999987542 3678999999999888999999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||||.+++   +++|.++|+++|+++++|+++..    +..+..+...   +..+++.|++|++   |.|+|++++++
T Consensus       166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~---~~d~~~~s~~K~~---g~~~G~l~~~~  231 (397)
T TIGR01976       166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQAT---GADFLTCSAYKFF---GPHMGILWGRP  231 (397)
T ss_pred             CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHc---CCCEEEEechhhc---CCceEEEEEcH
Confidence            999999965   88999999999999999999753    2222222222   2337778999996   45799998854

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.88  E-value=3.5e-21  Score=177.88  Aligned_cols=204  Identities=17%  Similarity=0.142  Sum_probs=156.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      .+.|||+.-...    -++++++.+++.+......       ...+...+.+.++|+.+|++++        .+++++++
T Consensus        18 ~~~~~~~~~~~~----~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~~   85 (387)
T PRK09331         18 EEFINLDPIQRG----GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVTH   85 (387)
T ss_pred             ccccccChhhcC----CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEeC
Confidence            456666644322    4778999999998764321       1112223346899999999982        35688999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEEEc
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVII  190 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~  190 (319)
                      |+++++..++.+++++||+|+++.++|......++..|++++.++...+.++.+|++.+++.+++       ++++|+++
T Consensus        86 g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~  165 (387)
T PRK09331         86 GAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT  165 (387)
T ss_pred             CHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence            99999999999999999999999999887777788999999999874334567999999998853       57899999


Q ss_pred             CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      +|+|+||..   .++++|+++|+++|+++++|++|+.    +..+......   +..++++|++|+++ .+.|+||++++
T Consensus       166 ~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~----g~~~~~~~~~---g~D~~~~s~~K~l~-~~~~~G~l~~~  234 (387)
T PRK09331        166 HVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTV----GRMPVDGKKL---GADFIVGSGHKSMA-ASAPSGVLATT  234 (387)
T ss_pred             CCCCCCccc---ccHHHHHHHHHHcCCEEEEECCccc----CCcCCCHHHc---CCCEEEeeCccccc-CCCCEEEEEEC
Confidence            999999998   4599999999999999999999985    2222222222   23488999999976 45589999885


Q ss_pred             C
Q 020968          271 D  271 (319)
Q Consensus       271 ~  271 (319)
                      +
T Consensus       235 ~  235 (387)
T PRK09331        235 E  235 (387)
T ss_pred             H
Confidence            3

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.88  E-value=6.3e-21  Score=177.30  Aligned_cols=203  Identities=21%  Similarity=0.277  Sum_probs=156.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC----CCC----CcCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC----YSS----TVGILPARRAIADYLNRDLPYKLS-PDDVY  114 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----Y~~----~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~  114 (319)
                      +.+++.|+.+..+     ++++.+.+++.+.+.......    +..    ....+++|+.++++++      .+ +++|+
T Consensus        16 ~~~~~yld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~   84 (403)
T TIGR01979        16 GKPLVYLDSAATS-----QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIV   84 (403)
T ss_pred             CCceEEEeCcccc-----CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEE
Confidence            5578999999865     567888999987765421110    100    1235688888998883      34 67999


Q ss_pred             EeCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceE
Q 020968          115 LTLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA  186 (319)
Q Consensus       115 ~~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  186 (319)
                      +|+|++++++.++.++    .++||+|+++++.|.+    +...++..|.+++.++.+  .++.+|++++++.+.+++++
T Consensus        85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l  162 (403)
T TIGR01979        85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL  162 (403)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence            9999999999998875    5789999999998765    345666789999999875  34578999999999989999


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      +++++++||||.+++   +++|.++|+++|+++++|++|+...    .+..+...   +..+++.|++|.++.+|  +|+
T Consensus       163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~~---~~d~~~~s~~K~~gp~G--~g~  230 (403)
T TIGR01979       163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQAL---DCDFYVFSGHKMYGPTG--IGV  230 (403)
T ss_pred             EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCcccc---CCCEEEEecccccCCCC--ceE
Confidence            999999999999987   7889999999999999999997522    22222222   34589999999987666  888


Q ss_pred             EEeeC
Q 020968          267 LVTSD  271 (319)
Q Consensus       267 i~~~~  271 (319)
                      ++++.
T Consensus       231 l~~~~  235 (403)
T TIGR01979       231 LYGKE  235 (403)
T ss_pred             EEEch
Confidence            88753

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK10534 L-threonine aldolase; Provisional

Probab=99.88  E-value=7.9e-22  Score=178.73  Aligned_cols=212  Identities=17%  Similarity=0.169  Sum_probs=151.0

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL  127 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~  127 (319)
                      |+|+.+...     .++|.+++++.+....  ...|+++....+|++++++++        ..+.+++++|+++++..++
T Consensus         2 ~~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~--------g~~~~~v~~~g~~a~~~~l   66 (333)
T PRK10534          2 IDLRSDTVT-----RPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS--------GKEAALFLPTGTQANLVAL   66 (333)
T ss_pred             cccccccCC-----CCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh--------CCCeEEEeCchHHHHHHHH
Confidence            677777643     3778999998765433  347877778899999999998        2345578888888888888


Q ss_pred             HHhcCCCCEEEEcCCCCcc-hHHH-HhhCC-CeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcccc
Q 020968          128 TVLARPGANILLPRPGFPY-YEAR-ATHSH-LEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGN  198 (319)
Q Consensus       128 ~~l~~~gd~Vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~  198 (319)
                      .+++++||+|+++.|.|.. |... +...+ .+++.++.+  .+|.+|++++++++.+      ++++|++++|+  +|.
T Consensus        67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~  142 (333)
T PRK10534         67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK  142 (333)
T ss_pred             HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence            8889999999998888853 3321 23333 566666653  4578999999998865      57899999766  599


Q ss_pred             ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee-EEEeeCCCCCcc
Q 020968          199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG-WLVTSDPNGILQ  277 (319)
Q Consensus       199 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~  277 (319)
                      +++.+++++|+++|+++++++++||+|......... .....+....+.+ +.||||.|+++   +| |++++       
T Consensus       143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~-~~~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~-------  210 (333)
T PRK10534        143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYG-CELKEITQYCDSF-TICLSKGLGTP---VGSLLVGN-------  210 (333)
T ss_pred             ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcC-CCHHHHHhcCCEE-EEEeEcCCCCc---ccceEEcC-------
Confidence            999999999999999999999999997632110000 1111121111222 24899998765   78 56653       


Q ss_pred             chHHHHHHHHhhhh
Q 020968          278 DSGIVDSIKSFLNI  291 (319)
Q Consensus       278 ~~~~~~~~~~~~~~  291 (319)
                       ++++++++..+..
T Consensus       211 -~~~i~~~~~~~~~  223 (333)
T PRK10534        211 -RDYIKRARRWRKM  223 (333)
T ss_pred             -HHHHHHHHHHHHH
Confidence             3588888877654

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.88  E-value=2e-21  Score=179.12  Aligned_cols=242  Identities=13%  Similarity=0.117  Sum_probs=164.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+..+|+|..|....+.. ..+|.+.+++.+++.....  ..|+ .....+|++.+++++    |    .+++++++|++
T Consensus        25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----g----~~~~~~~~sg~   94 (379)
T TIGR00707        25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYY-TEPQEELAEKLVEHS----G----ADRVFFCNSGA   94 (379)
T ss_pred             CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccC-CHHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence            367789999975432222 2458999999888765321  2232 223445555555554    3    35999999999


Q ss_pred             HHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHhhCCCeEEE----EeccCCCCCcC--CHHHHHhhhccCceEE
Q 020968          121 QAIEVILTVLA---R----PGANILLPRPGFPYYEARATHSHLEVRH----FDLLPAKGWEV--DLDAVEALADENTVAL  187 (319)
Q Consensus       121 ~ai~~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~--d~~~l~~~l~~~~~~v  187 (319)
                      +++..+++.+.   .    +|++|++++|+|+.+...+...+.....    .+...+..+..  |++.+++.+.+++++|
T Consensus        95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v  174 (379)
T TIGR00707        95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV  174 (379)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence            99999988652   2    3799999999998876666554443221    11111111111  8999999988788888


Q ss_pred             EEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968          188 VIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       188 ~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      +++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+.. .+.......++++   ++||.++ +|+|+||
T Consensus       175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~  249 (379)
T TIGR00707       175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA  249 (379)
T ss_pred             EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence            886667778864 78999999999999999999999999987665532 2221222223333   6899997 9999999


Q ss_pred             EEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          267 LVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       267 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++.        ++++.++... ....+.+++.|.++..++
T Consensus       250 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL  283 (379)
T TIGR00707       250 TLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVL  283 (379)
T ss_pred             EEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHH
Confidence            99853        4777776532 233456888998887654

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.88  E-value=4.2e-21  Score=179.59  Aligned_cols=203  Identities=19%  Similarity=0.256  Sum_probs=154.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-----CCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-----CYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-----~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .+++.|+.+...     ++++.+.+++.+.+......     .|..   ....+++|+.++++++.    . ++++|++|
T Consensus        31 ~~~iyLd~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~----~-~~~~v~~t  100 (424)
T PLN02855         31 SKLVYLDNAATS-----QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINA----S-TSREIVFT  100 (424)
T ss_pred             CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCC----C-CCCEEEEe
Confidence            468999999865     67788999998876542111     1110   11246888888888832    1 35799999


Q ss_pred             CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968          117 LGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       117 ~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      +|+|++++.+++++    +++||+|+++.+.|++    +...++..|.+++.++.+..  ..+|++++++.+++++++|+
T Consensus       101 ~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~lv~  178 (424)
T PLN02855        101 RNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKLVA  178 (424)
T ss_pred             CCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceEEE
Confidence            99999999998863    5789999999998864    45566788999999987543  35899999999988899999


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +++++||||.+++   +++|+++|+++|+++++|++|..    +..+..+..+   +..+++.|++|.++.+|  +||++
T Consensus       179 i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~  246 (424)
T PLN02855        179 THHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTL---GADFLVASSHKMCGPTG--IGFLW  246 (424)
T ss_pred             EeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhc---CCCEEEeecccccCCCc--cEEEE
Confidence            9999999999987   67889999999999999999964    2222233222   22478999999876555  89998


Q ss_pred             eeC
Q 020968          269 TSD  271 (319)
Q Consensus       269 ~~~  271 (319)
                      +++
T Consensus       247 ~~~  249 (424)
T PLN02855        247 GKS  249 (424)
T ss_pred             Ech
Confidence            754

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.88  E-value=3.7e-21  Score=178.39  Aligned_cols=243  Identities=16%  Similarity=0.147  Sum_probs=170.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCC-cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..+|+|..|.+...  +.. .|.+.+++.+++....   +....+..++++.+++++.+..    ..+++++++|+++
T Consensus        37 dg~~~iD~~~g~~~~~--lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~----~~~~v~~~~gg~e  107 (396)
T PRK02627         37 DGKEYLDFLAGIAVNN--LGHCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELS----GMDKVFFCNSGAE  107 (396)
T ss_pred             CCCEEEECCccHHhcc--CCCCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhc----CCCEEEECCCcHH
Confidence            4677899988865422  344 5889999998876532   1111233577888888887753    3479999999999


Q ss_pred             HHHHHHHHhcCCC-------CEEEEcCCCCcchHHHHhhCCCeE-EEEeccC-CCCC----cCCHHHHHhhhccCceEEE
Q 020968          122 AIEVILTVLARPG-------ANILLPRPGFPYYEARATHSHLEV-RHFDLLP-AKGW----EVDLDAVEALADENTVALV  188 (319)
Q Consensus       122 ai~~~~~~l~~~g-------d~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~v~  188 (319)
                      |+..+++.+...+       ++|++..+.|..+...+...+... ......+ ..++    ..|++++++.+.+++++|+
T Consensus       108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi  187 (396)
T PRK02627        108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM  187 (396)
T ss_pred             HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence            9999999765432       679999999987755444333221 1111111 1111    1289999999987888999


Q ss_pred             EcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          189 IINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       189 l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      +..++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+.. .....+....++   .+|||.++ +|+|+||+
T Consensus       188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~rig~~  262 (396)
T PRK02627        188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPDI---MTLAKGLG-GGVPIGAV  262 (396)
T ss_pred             EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCCE---EEEcchhh-CCcccEEE
Confidence            988899999 6889999999999999999999999999988665532 222222222222   37999987 99999999


Q ss_pred             EeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          268 VTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++        ++++.+.... ....+.+++.|.++..++
T Consensus       263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l  295 (396)
T PRK02627        263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVI  295 (396)
T ss_pred             EEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHH
Confidence            9864        4666665432 234567888998877755

>PLN02721 threonine aldolase

Probab=99.88  E-value=3.1e-21  Score=176.10  Aligned_cols=215  Identities=16%  Similarity=0.154  Sum_probs=151.5

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      ..+++|+.+.+.     .+++.+.+++.+.........|++  ...+||+++++++..        +.+++++++++++.
T Consensus         5 ~~~~~~~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~   69 (353)
T PLN02721          5 SRVVDLRSDTVT-----KPTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNL   69 (353)
T ss_pred             hhhhhhhccccc-----CCCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence            357899999876     357888888876411222223433  368999999999942        33566666677777


Q ss_pred             HHHHHhcC-CCCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-------cCceEEEEcCC-
Q 020968          125 VILTVLAR-PGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------ENTVALVIINP-  192 (319)
Q Consensus       125 ~~~~~l~~-~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~v~l~~p-  192 (319)
                      .++.++++ +||+|++++|+|.....   .+...|++++.++.+  .++.+|++.+++.++       +++++|+++++ 
T Consensus        70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~  147 (353)
T PLN02721         70 ISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTH  147 (353)
T ss_pred             HHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccc
Confidence            77887777 99999999999864433   567889999888764  345789999999987       57889999875 


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC--CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      +||+|.+++.+++++|.++|+++|+++|+|++|.....  .+.   ....+... ...++.|+||+++.+   +||++..
T Consensus       148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~---~~~~~~~~-~d~~~~s~sK~l~~~---~G~~~~~  220 (353)
T PLN02721        148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV---PVHRLVKA-ADSVSVCLSKGLGAP---VGSVIVG  220 (353)
T ss_pred             cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC---CHHHHhhh-CCEEEEecccccCCc---eeeEEec
Confidence            78999999999999999999999999999998853221  111   11111111 124455899998643   6764433


Q ss_pred             CCCCCccchHHHHHHHHhhh
Q 020968          271 DPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~  290 (319)
                      +       +++++.+.....
T Consensus       221 ~-------~~~~~~~~~~~~  233 (353)
T PLN02721        221 S-------KSFIRKAKRLRK  233 (353)
T ss_pred             C-------HHHHHhHHHHHH
Confidence            3       247776665554

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.88  E-value=8.3e-21  Score=174.40  Aligned_cols=190  Identities=21%  Similarity=0.254  Sum_probs=144.0

Q ss_pred             CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCC
Q 020968           80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH  155 (319)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g  155 (319)
                      +.+|+ .+...+|+++++++.        ..+++++++|+++|+..++.+++++||+|+++.|+|..+...+    ...+
T Consensus        45 Y~R~~-~p~~~~le~~lA~l~--------g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~  115 (382)
T TIGR02080        45 YSRSG-NPTRDLLQQALAELE--------GGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC  115 (382)
T ss_pred             ccCCC-CchHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence            44554 345789999999988        2468999999999999999999999999999999998644333    2234


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF  235 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~  235 (319)
                      .++..++.       .|++.+++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|.......   
T Consensus       116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~---  182 (382)
T TIGR02080       116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN---  182 (382)
T ss_pred             eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence            45444431       3889999999888999999999999999977   7788899999999999999998644211   


Q ss_pred             CCCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHH
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLK  303 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~  303 (319)
                       ++. ...   .++++|+||.++. +|++.|++++.++       +++++++..+.. ....+++.++.+
T Consensus       183 -pl~-~ga---Divv~S~sK~l~G~~~~~~G~i~~~~~-------~~~~~l~~~~~~~g~~~sp~~a~l~  240 (382)
T TIGR02080       183 -PLA-LGA---DLVLHSCTKYLNGHSDVIAGAVIAKDP-------QVAEELAWWANNLGVTGGAFDSYLT  240 (382)
T ss_pred             -chh-hCC---CEEEeecceeccCCCCceeEEEEeCCH-------HHHHHHHHHHHccCCCCCHHHHHHH
Confidence             221 122   3899999999864 6889999887553       477777766654 445566665543

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.88  E-value=1.2e-20  Score=174.01  Aligned_cols=183  Identities=20%  Similarity=0.259  Sum_probs=139.6

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  162 (319)
                      +...+|++.+++++        ..+++++++|+++|+..++.+++++||+|+++.+.|.+..    ..+...|++++.++
T Consensus        61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd  132 (390)
T PRK08133         61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD  132 (390)
T ss_pred             hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence            34678888899887        3457899999999999999999999999999999986643    34567899988887


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .+       |++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|.......    ++ .. 
T Consensus       133 ~~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~----pl-~~-  196 (390)
T PRK08133        133 LT-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ----PL-KL-  196 (390)
T ss_pred             CC-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh-
Confidence            52       788999999889999999999999999965   8999999999999999999987543211    11 11 


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHH
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFL  302 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~  302 (319)
                        +..+++.|+||.++.+|.++|++++.++       ++++++..... .....+++.++.
T Consensus       197 --g~Divv~S~sK~~~g~g~~~GG~vv~~~-------~~~~~~~~~~~~~g~~~~~~~a~~  248 (390)
T PRK08133        197 --GADVVIHSATKYLDGQGRVLGGAVVGSK-------ELMEEVFGFLRTAGPTLSPFNAWV  248 (390)
T ss_pred             --CCcEEEeecceeecCCcceEeEEEEcCH-------HHHHHHHHHHHHhCCCCCHHHHHH
Confidence              1238899999999999999955544332       35555554433 233445554443

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.88  E-value=1.5e-20  Score=174.69  Aligned_cols=218  Identities=16%  Similarity=0.107  Sum_probs=158.0

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC------CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .+.++|..++.      .+++.+++++...+...      ....|....+.+++++.+++++.+.+|.  +...|+++ |
T Consensus        19 ~~~~~~~~~~~------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-s   89 (402)
T cd00378          19 RETLELIASEN------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-S   89 (402)
T ss_pred             HhCeeeeccCC------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-C
Confidence            55888887762      45789999998664221      1223555556678888777777666664  34455555 4


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-----HhhCCCeEEEEeccCC-CCCcCCHHHHHhhhc-cCceEEEEcC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYYEAR-----ATHSHLEVRHFDLLPA-KGWEVDLDAVEALAD-ENTVALVIIN  191 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~~~v~l~~  191 (319)
                      +++|+..++.+++++||+|+++.|.|..+...     ++..|.++..++...+ +++.+|++++++.+. .+++++++++
T Consensus        90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~  169 (402)
T cd00378          90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA  169 (402)
T ss_pred             cHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence            67999999999999999999999999765433     5667877777766543 267899999999885 5788999889


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCC-CCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      |+||+  .   .++++|+++|+++|+++|+|++| .++.+.+..+.++.  .  . .++++|+||++  +|+|.||++++
T Consensus       170 ~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~--~-dv~~~s~sK~l--~G~~gg~i~~~  237 (402)
T cd00378         170 SAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--G--A-DVVTTTTHKTL--RGPRGGLILTR  237 (402)
T ss_pred             cccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--C--C-cEEEeccccCC--CCCCceEEEec
Confidence            88864  3   24899999999999999999995 45555443222332  1  1 27899999985  88999999986


Q ss_pred             CCCCCccchHHHHHHHHhhh
Q 020968          271 DPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~  290 (319)
                      ++       +++++++....
T Consensus       238 ~~-------~~~~~l~~~~~  250 (402)
T cd00378         238 KG-------ELAKKINSAVF  250 (402)
T ss_pred             cH-------HHHHHHHHHhC
Confidence            53       47777766544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK07179 hypothetical protein; Provisional

Probab=99.87  E-value=2.6e-20  Score=173.28  Aligned_cols=214  Identities=13%  Similarity=0.138  Sum_probs=157.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----CCCC-CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCY-SSTVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y-~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .+..+++|+..+   |..+...|.+.+++.+++....     ...| .......+|++.+++++        ..+.++++
T Consensus        52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~  120 (407)
T PRK07179         52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT--------GFESCLLC  120 (407)
T ss_pred             CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh--------CCCcEEEE
Confidence            355678888877   3456778999999999886421     1112 11224568888888887        23567889


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCc
Q 020968          117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNP  195 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~np  195 (319)
                      +|+++|+..+++++..+||.|++..+.|......++..|.++..++.       .|++.+++++++ ++++|++.+++||
T Consensus       121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~  193 (407)
T PRK07179        121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST  193 (407)
T ss_pred             CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            99999999999999999999999999998877777788887765542       489999998875 4778888999999


Q ss_pred             cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEecCccccCCCcceeeEEEeeCCCC
Q 020968          196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNG  274 (319)
Q Consensus       196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~s~sK~~~~~G~r~G~i~~~~~~~  274 (319)
                      ||.+.+   +++|.++|+++|+++|+||+|....++......+..++.... .+++.|+||+++   .|+||++++.   
T Consensus       194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~---  264 (407)
T PRK07179        194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR---  264 (407)
T ss_pred             CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH---
Confidence            999977   788999999999999999999854433222111222222122 488999999975   3689999853   


Q ss_pred             CccchHHHHHHHHh
Q 020968          275 ILQDSGIVDSIKSF  288 (319)
Q Consensus       275 ~~~~~~~~~~~~~~  288 (319)
                           ++++.+...
T Consensus       265 -----~~~~~~~~~  273 (407)
T PRK07179        265 -----ELAEYVPFV  273 (407)
T ss_pred             -----HHHHHHHHh
Confidence                 465655543

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.87  E-value=1.5e-20  Score=175.18  Aligned_cols=231  Identities=16%  Similarity=0.169  Sum_probs=157.6

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      ...++|+..+.   ..+..+|.+.+++.+.+.....      ..|+......+|++.+++++.       .++.+++++|
T Consensus        46 ~~~~~~~sn~y---l~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~sG  115 (410)
T PRK13392         46 RRVTIWCSNDY---LGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTSG  115 (410)
T ss_pred             ceEEEEECCCc---cCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECcH
Confidence            45788888774   3467889999999988765321      123333346788888888882       2455666665


Q ss_pred             HHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCC
Q 020968          119 CTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p  192 (319)
                       ++++..++..+..  +|+.|++....|..+...++..|.++..++.       -|.+.+++.+.    +++++|++++|
T Consensus       116 -~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v~i~~~  187 (410)
T PRK13392        116 -YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLIAFESV  187 (410)
T ss_pred             -HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEEEEeCC
Confidence             5677777776643  7898888777887777777888888766542       14444554442    46789999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||||.+++   +++|.++|+++|+++|+||+|....++.............++ .++++|+||.|+++|   ||++++.
T Consensus       188 ~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~  261 (410)
T PRK13392        188 YSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASA  261 (410)
T ss_pred             CCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCH
Confidence            999999977   888999999999999999999954443221111111111122 388999999999998   9998742


Q ss_pred             CCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968          272 PNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK  307 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l  307 (319)
                              ++++.++.....   +...+++.|.++..++
T Consensus       262 --------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL  292 (410)
T PRK13392        262 --------DLIDFVRSFAPGFIFTTALPPAVAAGATAAI  292 (410)
T ss_pred             --------HHHHHHHHhCcchhccCcCCHHHHHHHHHHH
Confidence                    577777765532   2334556676665544

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.87  E-value=1.4e-20  Score=173.74  Aligned_cols=185  Identities=17%  Similarity=0.224  Sum_probs=142.4

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHF  161 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~  161 (319)
                      .+...+|++.+++++        ..+..++++++++|+..++.+++++||+|+++.|.|....    ..+...|+++..+
T Consensus        63 ~p~~~~le~~lA~l~--------g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v  134 (398)
T PRK08249         63 NPTVQAFEEKVRILE--------GAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC  134 (398)
T ss_pred             ChHHHHHHHHHHHHh--------CCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc
Confidence            345689999999998        2356788888899999999999999999999999998653    3455678887766


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      +.       .|++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|.......    ++. .
T Consensus       135 d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~l~-~  199 (398)
T PRK08249        135 ET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----PLA-L  199 (398)
T ss_pred             CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----chh-h
Confidence            53       5899999999888999999999999999977   8889999999999999999999654321    221 1


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLK  303 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~  303 (319)
                      .   ..+++.|+||.++.+|.++|++++.+       ++++++++..+.. ....+++.++.+
T Consensus       200 ~---~Divv~S~sK~l~g~~~~~gG~vv~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~  252 (398)
T PRK08249        200 G---ADLVIHSATKFLSGHADALGGVVCGS-------KELMEQVYHYREINGATMDPMSAYLI  252 (398)
T ss_pred             C---CCEEeccCceecCCCCCceEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            1   22888999999988888875544433       2577777766653 445566666653

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.87  E-value=1.4e-21  Score=167.76  Aligned_cols=295  Identities=17%  Similarity=0.156  Sum_probs=211.8

Q ss_pred             CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc
Q 020968            9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTV   87 (319)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~   87 (319)
                      .++|.-    ++.+.+++.|.++.+.+.+    ..++.-|||+.|.. +........+.+++|-++.+.......|-|..
T Consensus        24 ~~s~~s----~V~maPpDpILGVTeAfk~----D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~   95 (427)
T KOG1411|consen   24 ASSWWS----HVEMAPPDPILGVTEAFKK----DPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPIT   95 (427)
T ss_pred             ccchhh----cCCCCCCCCcccHHHHHhc----CCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhcccc
Confidence            345544    6889999999999987764    34788899999964 33444667788888877766655556899999


Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEE--eCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  163 (319)
                      |.+++.+..+++........+..++|+.  |-++|.++......+.  -++..|.++.|+|.++..+....|+.+..+..
T Consensus        96 Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrY  175 (427)
T KOG1411|consen   96 GLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRY  175 (427)
T ss_pred             chHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeee
Confidence            9999999999998543333445556655  4557778877766553  36899999999999999999999999988887


Q ss_pred             cCCCCCcCCHHHHHhhhccCc-eEEEEcC--CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC--CC
Q 020968          164 LPAKGWEVDLDAVEALADENT-VALVIIN--PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV--PM  238 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~-~~v~l~~--p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~  238 (319)
                      ......++|.+.+.+.+.+.+ ..+++.+  .|||||+-.+.+++++|.++.++.+.+-+.|.+|++|..+.....  .+
T Consensus       176 yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~av  255 (427)
T KOG1411|consen  176 YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAV  255 (427)
T ss_pred             ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHH
Confidence            766677899888777665432 2233343  399999999999999999999999999999999999886543211  12


Q ss_pred             ccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhcccc
Q 020968          239 GVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNS  312 (319)
Q Consensus       239 ~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~  312 (319)
                      ..+ ....+++++.|+.|.+|+.|.|+|.+.+..+..+. ...+..+++.....+++.|++--.-++..++++++
T Consensus       256 R~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~-A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~  329 (427)
T KOG1411|consen  256 RLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADE-AKRVESQLKILIRPMYSNPPLHGARIVATILSDPD  329 (427)
T ss_pred             HHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHH-HHHHHHHHHHHhcccccCCCccchhhhhhccCChH
Confidence            222 23457899999999999999999998443332111 11233334444444444455554444444666553

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.87  E-value=2.6e-20  Score=172.18  Aligned_cols=194  Identities=21%  Similarity=0.231  Sum_probs=141.3

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      +.|.++.+..     ++.++.+.+.+........+.+|+ .+...+|++.+|+++.        .+..+++++++.++..
T Consensus        30 ~pi~~~~~~~-----~~~~~~~~~~~~~~~~~~~y~r~~-~p~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~   95 (398)
T PRK07504         30 EALFLTQGFV-----YDTAEAAEARFKGEDPGFIYSRYS-NPTVDMFEKRMCALEG--------AEDARATASGMAAVTA   95 (398)
T ss_pred             CCeECCCCcc-----CCCHHHHHHHhccCcCCceeecCC-CchHHHHHHHHHHHhC--------CCeeeEecCHHHHHHH
Confidence            4577777753     233444433222111111233453 3457899999999982        2344567788899988


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccC
Q 020968          126 ILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       126 ~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  201 (319)
                      ++.+++++||+|+++.+.|..+...    +...|+++..++       ..|++++++++++++++|++++|+||+|.+++
T Consensus        96 ~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d  168 (398)
T PRK07504         96 AILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID  168 (398)
T ss_pred             HHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC
Confidence            8888889999999999999875433    346788877775       26899999999889999999999999999976


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                         +++|.++|+++|+++|+|++|....+.    .++ .+   +..+++.|+||.++++|+++|++++.+
T Consensus       169 ---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~~-~~---gaDivv~S~sK~l~g~g~~~GG~vv~~  227 (398)
T PRK07504        169 ---IAAVAKIANQAGAKLVVDNVFATPLFQ----KPL-EL---GAHIVVYSATKHIDGQGRCLGGVVLSD  227 (398)
T ss_pred             ---HHHHHHHHHHcCCEEEEECCccccccC----Cch-hh---CCCEEEeeccccccCCccceEEEEEeC
Confidence               888899999999999999999864432    111 12   234899999999999999997555443

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.87  E-value=2e-20  Score=171.99  Aligned_cols=192  Identities=22%  Similarity=0.275  Sum_probs=145.1

Q ss_pred             CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCC
Q 020968           80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH  155 (319)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g  155 (319)
                      +.+|+ ++....|++++|++.+        .+++++++|+++++..++.+++++||+|+++.|.|......+    ...+
T Consensus        46 Y~R~~-~pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g  116 (386)
T PRK08045         46 YSRRG-NPTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC  116 (386)
T ss_pred             eeCCC-CccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence            34554 3467899999999872        346999999999999999999999999999999998633322    2234


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF  235 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~  235 (319)
                      .++..++       ..|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|......    
T Consensus       117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~----  182 (386)
T PRK08045        117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ----  182 (386)
T ss_pred             eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----
Confidence            4555443       25899999999888999999999999999987   778888899999999999999874321    


Q ss_pred             CCCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                      .++. ...   .+++.|++|.++. ++.+.|++++.++       ++.++++.... .....+++.++.+..
T Consensus       183 ~pl~-~ga---Divv~S~tK~l~G~~d~~~G~vi~~~~-------~~~~~l~~~~~~~g~~~~p~~~~l~~r  243 (386)
T PRK08045        183 NPLA-LGA---DLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLR  243 (386)
T ss_pred             Cchh-hCC---CEEEeecceeccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence            1221 222   2899999999864 5688999987543       47777765554 355677888876554

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.87  E-value=1.9e-20  Score=173.77  Aligned_cols=206  Identities=22%  Similarity=0.276  Sum_probs=155.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC-----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      +..+++|+.|+|+    ++.|+.+.++..+.  . ....|.+     ..|..++++++++++.+.+|.  +.++++++++
T Consensus        19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~   89 (398)
T cd00613          19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE   89 (398)
T ss_pred             ccCcccccccccC----CcCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence            3456999999987    67777777766665  2 2235555     678999999999999987764  3446766665


Q ss_pred             HH-HHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHhhCC----CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          119 CT-QAIEVILTVLARP--GANILLPRPGFPYYEARATHSH----LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       119 ~t-~ai~~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      ++ ++...+..++..+  ||+|++++|.|..+...+...|    .+++.++..+  ++.+|++++++.+.+++++|++++
T Consensus        90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~  167 (398)
T cd00613          90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY  167 (398)
T ss_pred             hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence            44 5555555555665  9999999999999888887777    8888887643  346899999999988899999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEE
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWL  267 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i  267 (319)
                      |+ |+|.+.  +.+++|.++|+++|+++|+|+++.....    .......   +..+++.|++|++ +|    |+|+||+
T Consensus       168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~~---~~d~~~~s~~K~~-~p~g~Ggp~~g~l  236 (398)
T cd00613         168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGEY---GADIVVGNLQKTG-VPHGGGGPGAGFF  236 (398)
T ss_pred             CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHHc---CCCEEEeeccccC-CCCCCCCCceeEE
Confidence            85 899983  3469999999999999999998754221    1111111   3459999999998 66    8999999


Q ss_pred             EeeC
Q 020968          268 VTSD  271 (319)
Q Consensus       268 ~~~~  271 (319)
                      ++++
T Consensus       237 ~~~~  240 (398)
T cd00613         237 AVKK  240 (398)
T ss_pred             EEhh
Confidence            9854

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.87  E-value=5.5e-20  Score=167.57  Aligned_cols=211  Identities=16%  Similarity=0.157  Sum_probs=148.7

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCC----CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYS----STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      .+++|+..+.   ....-+|++.+++++.++....  ..|.    ......++++.+++++    |  .  ++.++++++
T Consensus         2 ~~~~~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg   70 (349)
T cd06454           2 KVLNFCSNDY---LGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG   70 (349)
T ss_pred             CceecccCCc---cccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence            3567877763   2345568999999998875321  1222    2223456666666665    2  1  245666667


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-----CceEEEEcCCCC
Q 020968          120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----NTVALVIINPGN  194 (319)
Q Consensus       120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~l~~p~n  194 (319)
                      ++++..++++++++||+|+++.|.|..+...++..|.+++.++.       +|++.+++.+++     .++++++++++|
T Consensus        71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~  143 (349)
T cd06454          71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS  143 (349)
T ss_pred             HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence            78888888888899999999999999988888889998877652       477788887753     457788889999


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC-CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCC
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN  273 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~  273 (319)
                      |||...+   +++|+++|+++|+++|+|++|+...+.... ..........+.+++++|+||.++.+|   ||++.++  
T Consensus       144 ~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~--  215 (349)
T cd06454         144 MDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK--  215 (349)
T ss_pred             CCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--
Confidence            9999855   889999999999999999999753332111 111111223356799999999998766   8988643  


Q ss_pred             CCccchHHHHHHHHh
Q 020968          274 GILQDSGIVDSIKSF  288 (319)
Q Consensus       274 ~~~~~~~~~~~~~~~  288 (319)
                            ++.+.+...
T Consensus       216 ------~~~~~~~~~  224 (349)
T cd06454         216 ------ELIDYLRSY  224 (349)
T ss_pred             ------HHHHHHHHh
Confidence                  466666543

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.87  E-value=2.9e-20  Score=172.10  Aligned_cols=183  Identities=21%  Similarity=0.249  Sum_probs=138.8

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  162 (319)
                      +...+|++.++++++        .+..+++++++.|+.+++.+++++||+|+++.|.|...    ...+...|+++..++
T Consensus        65 p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd  136 (403)
T PRK07503         65 PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVD  136 (403)
T ss_pred             chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeC
Confidence            457899999999883        23467777888999999999999999999999998653    234567888888877


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       .|++.+++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|......    .++. + 
T Consensus       137 ~-------~d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~-~-  200 (403)
T PRK07503        137 L-------TDPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ----RPLE-L-  200 (403)
T ss_pred             C-------CCHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cchh-h-
Confidence            5       2789999999888999999999999999965   899999999999999999999864321    1221 1 


Q ss_pred             CCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh--hhh-cCCcchHHHHHH
Q 020968          243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--LNI-SSDPATFIQFLK  303 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~q~~~  303 (319)
                        ...+++.|+||.++.+| .|.|+++. +       +++.++++..  ... ....+++.++.+
T Consensus       201 --g~Di~v~S~tK~l~g~gd~~gG~v~~-~-------~~l~~~l~~~~~~~~~g~~~s~~~a~l~  255 (403)
T PRK07503        201 --GADLVVHSATKYLGGHGDITAGLVVG-G-------KALADRIRLEGLKDMTGAVMSPFDAFLL  255 (403)
T ss_pred             --CCCEEEccccccccCCCceeEEEEEc-C-------HHHHHHHHhhhHHhCcCCCCCHHHHHHH
Confidence              22499999999998876 67788774 3       2477777633  332 334455555443

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.86  E-value=2.7e-20  Score=172.08  Aligned_cols=185  Identities=22%  Similarity=0.282  Sum_probs=139.2

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~  163 (319)
                      ...+|++.++++..        .+..++++++++++.+++.+++++||+|+++.|.|..    +...+...|.++..++.
T Consensus        61 ~~~~Le~~lA~l~g--------~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~  132 (405)
T PRK08776         61 TRDLLGEALAELEG--------GAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL  132 (405)
T ss_pred             HHHHHHHHHHHHhC--------CCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence            45678888888762        2334566666899999999999999999999999986    34455667888777764


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                             .|++++++.+++++++|++++|+||||.+.   ++++|+++|+++|+++|+|++|....    ...++. +..
T Consensus       133 -------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~----~~~pl~-~ga  197 (405)
T PRK08776        133 -------TDPRSLADALAQSPKLVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPA----LQKPLE-FGA  197 (405)
T ss_pred             -------CCHHHHHHhcCcCCeEEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccc----cCCccc-ccC
Confidence                   388999999888899999999999999994   58999999999999999999997522    112221 222


Q ss_pred             CCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          244 IVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                         .+++.|.+|.++.+ ++..|+++++++       ++.+++...... ....+++.++++..
T Consensus       198 ---Divv~S~tK~l~g~~~~~~G~vv~~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~~~  251 (405)
T PRK08776        198 ---DLVLHSTTKYINGHSDVVGGAVVARDA-------ELHQQLVWWANALGLTGSPFDAFLTLR  251 (405)
T ss_pred             ---CEEEecCceeecCCCCceEEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence               38999999999876 578899887653       477777655443 33456676666554

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.86  E-value=2.9e-20  Score=171.35  Aligned_cols=174  Identities=21%  Similarity=0.202  Sum_probs=133.9

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEE
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRH  160 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~  160 (319)
                      +.+...+|+++++++++.        +..++++++++|+.+++.+++++||+|+++.|.|......+    ...|+++..
T Consensus        59 ~~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~  130 (388)
T PRK07811         59 GNPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP  130 (388)
T ss_pred             CCccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence            345788999999999832        33455567789999999999999999999999998643332    235777666


Q ss_pred             EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      ++.       .|++++++++++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|......    .++. 
T Consensus       131 ~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~-  195 (388)
T PRK07811        131 VDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ----QPLA-  195 (388)
T ss_pred             eCC-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC----Cchh-
Confidence            553       48999999998899999999999999998   56999999999999999999999874431    1221 


Q ss_pred             cCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          241 FGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                      .   ...+++.|++|.++.+| .+.||++++++       ++.++++..+..
T Consensus       196 ~---gaDivv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~  237 (388)
T PRK07811        196 L---GADVVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNG  237 (388)
T ss_pred             h---CCcEEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHh
Confidence            1   12399999999998865 57799987653       466666655543

>PRK02948 cysteine desulfurase; Provisional

Probab=99.86  E-value=2.6e-20  Score=171.87  Aligned_cols=198  Identities=15%  Similarity=0.090  Sum_probs=147.9

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC--------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      +.|+.+..+     ++++.+.+++.+.+..... ++..        ..-.+++|+.+++++      +.++++|++++|+
T Consensus         2 ~yld~a~~~-----~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~   69 (381)
T PRK02948          2 IYLDYAATT-----PMSKEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGG   69 (381)
T ss_pred             EeccCCCCC-----CCCHHHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence            567777644     6778899999887753211 1111        012456677777776      3467899999999


Q ss_pred             HHHHHHHHHHhc----CCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          120 TQAIEVILTVLA----RPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       120 t~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      ++++..++.++.    ++|++|++....|+.+.   ..++..|.++..++.+.  ++.+|++++++.+++++++|++++|
T Consensus        70 t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~  147 (381)
T PRK02948         70 TESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHA  147 (381)
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECC
Confidence            999999988875    57899999997776543   44567899999988753  4578999999999888899999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||||.+++   +++|.++|+++|+++++|+++..    +..+..+.   ..+..+++.|++|.++.+|  +|++++.+
T Consensus       148 ~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~----g~~~~~~~---~~~~d~~~~s~~K~~gp~G--~G~l~~~~  214 (381)
T PRK02948        148 NSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTF----GKLPIDVF---EMGIDSLSVSAHKIYGPKG--VGAVYINP  214 (381)
T ss_pred             cCCcEeehh---HHHHHHHHHHcCCEEEEEChhhc----cccccCcc---cCCCCEEEecHHhcCCCCc--EEEEEEcC
Confidence            999999966   78899999999999999976543    11122222   2234588999999998888  78887654

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=2.9e-20  Score=171.51  Aligned_cols=188  Identities=18%  Similarity=0.160  Sum_probs=144.5

Q ss_pred             CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCC
Q 020968           81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHL  156 (319)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~  156 (319)
                      .+|+ ++...+|++.++++.        ..+++++++|+++|+.+++.+++++||+|+++.|.|..+..    .+...|+
T Consensus        60 ~r~~-~pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi  130 (394)
T PRK07050         60 GLHA-TPTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI  130 (394)
T ss_pred             CCCC-CHHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence            3443 445678888888887        35689999999999999999999999999999999987653    4567898


Q ss_pred             eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC
Q 020968          157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV  236 (319)
Q Consensus       157 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~  236 (319)
                      ++..++..       +.+++++++++++++|++++|+||+|.+   .++++|+++|+++|+++++|++|.....-    .
T Consensus       131 ~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~~----~  196 (394)
T PRK07050        131 TVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLAF----K  196 (394)
T ss_pred             EEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCccccccc----C
Confidence            88877631       4567888898899999999999999876   78999999999999999999999763321    1


Q ss_pred             CCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968          237 PMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL  302 (319)
Q Consensus       237 ~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~  302 (319)
                      ++. .   +..+++.|+||.++. .+.+.|++++.++       ++.++++..+.. ....+++..+.
T Consensus       197 ~l~-~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l  253 (394)
T PRK07050        197 PFE-H---GVDISVQALTKYQSGGSDVLMGATITADA-------ELHAKLKLARMRLGIGVSADDCSL  253 (394)
T ss_pred             HHH-c---CCeEEEEECCceecCCCCeeEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHH
Confidence            111 1   234999999999864 4567899887553       477777766653 44555555443

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.86  E-value=1.9e-20  Score=173.18  Aligned_cols=244  Identities=16%  Similarity=0.168  Sum_probs=163.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..+..+ -.|.+.+++.+++.....  .+. ....+....+++.+.+..    ..+++++++|+++|
T Consensus        29 dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA  100 (389)
T PRK01278         29 DGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAEA  100 (389)
T ss_pred             CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHHH
Confidence            4667899988743222334 568999999998865221  111 112233444555554422    34689999999999


Q ss_pred             HHHHHHHh----cCCCC----EEEEcCCCCcchHHHHhhCCCeEEEEec-cC-CCCCc----CCHHHHHhhhccCceEEE
Q 020968          123 IEVILTVL----ARPGA----NILLPRPGFPYYEARATHSHLEVRHFDL-LP-AKGWE----VDLDAVEALADENTVALV  188 (319)
Q Consensus       123 i~~~~~~l----~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~~~l~~~l~~~~~~v~  188 (319)
                      +..+++..    ..+||    +|++.++.|+++...+...+........ .+ ..++.    .|++.+++.+++++++|+
T Consensus       101 ~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avi  180 (389)
T PRK01278        101 VECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAIL  180 (389)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEE
Confidence            99998876    34565    8999999999876555544433222110 00 11222    589999999987888888


Q ss_pred             EcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          189 IINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       189 l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      +..++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+... ....+.-...   +.++||.++ +|+|+||+
T Consensus       181 vep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~  255 (389)
T PRK01278        181 IEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGAC  255 (389)
T ss_pred             EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEEE
Confidence            887788888 78899999999999999999999999999876655422 1111111112   348999975 89999999


Q ss_pred             EeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          268 VTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++++        ++++.+..... .+.+.+++.|.++..++
T Consensus       256 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l  288 (389)
T PRK01278        256 LATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVL  288 (389)
T ss_pred             EEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHH
Confidence            9864        35555544332 34457888888875544

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.86  E-value=2.5e-20  Score=170.70  Aligned_cols=191  Identities=19%  Similarity=0.227  Sum_probs=144.6

Q ss_pred             CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCC
Q 020968           80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSH  155 (319)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g  155 (319)
                      +.+|+. +...+|++.++++.+        .+..++++|+++|+..++ .++++||+|+++.|.|...    ...++..|
T Consensus        46 y~r~~~-pt~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  115 (366)
T PRK08247         46 YSRTGN-PTRGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN  115 (366)
T ss_pred             ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence            334443 467899999999983        234578888899999876 5778999999999999864    34455689


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF  235 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~  235 (319)
                      +++..++.       .|++.+++++++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|.......   
T Consensus       116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---  182 (366)
T PRK08247        116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---  182 (366)
T ss_pred             ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC---
Confidence            98888764       38899999998889999999999998766   889999999999999999999996422211   


Q ss_pred             CCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                       ++    .....|++.|+||.++.+ +++.||++++++       ++.++++..+.. ....+++.|+++..
T Consensus       183 -p~----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~  242 (366)
T PRK08247        183 -PL----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-------ELCERLAYYQNAAGAVLSPFDSWLLIR  242 (366)
T ss_pred             -ch----hcCCcEEEeecceeccCCCceeeeEEecChH-------HHHHHHHHHHHhcCCCCChHHHHHHHh
Confidence             11    123459999999998764 579999987542       477777766553 34556777766544

>PLN02483 serine palmitoyltransferase

Probab=99.86  E-value=4.2e-20  Score=174.84  Aligned_cols=233  Identities=17%  Similarity=0.165  Sum_probs=159.5

Q ss_pred             CCCeEeccCCCCCCCCC--CCCcHHHHHHHHHHhhc--CCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           44 TRPLIPLGHGDPSAFPS--FRTASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~--~~~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      ..+++||++.+.-.+..  ..+.+.+.+++.+.-..  ..-..|+...++.++++.+|++++       .++.+++++| 
T Consensus        99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G-  170 (489)
T PLN02483         99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMG-  170 (489)
T ss_pred             CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCH-
Confidence            56788998887432221  22345666666654221  112347777789999999999994       2456666665 


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-------cC-----ceEE
Q 020968          120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------EN-----TVAL  187 (319)
Q Consensus       120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~-----~~~v  187 (319)
                      ..++..++.+++++||.|++++|+|..+...++..|++++.++.+       |.+.+++.++       ++     .+++
T Consensus       171 ~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~l  243 (489)
T PLN02483        171 YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKII  243 (489)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEE
Confidence            555667788899999999999999999999999999999988753       4555555443       11     2445


Q ss_pred             EEcC-CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          188 VIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       188 ~l~~-p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +++. ..|++|.+   .++++|+++|+++++++|+||+|+....+  +............+.+|+++||||+|+++|   
T Consensus       244 ivve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---  317 (489)
T PLN02483        244 VIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---  317 (489)
T ss_pred             EEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---
Confidence            5554 46999998   45999999999999999999999854332  222222333334456799999999998887   


Q ss_pred             eEEEeeCCCCCccchHHHHHHHHhhh--h--cCCcchHHHHHHHH
Q 020968          265 GWLVTSDPNGILQDSGIVDSIKSFLN--I--SSDPATFIQFLKSS  305 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~q~~~~~  305 (319)
                      ||++++.        ++++.++....  .  ...+++..|.+++.
T Consensus       318 G~i~~~~--------~li~~l~~~~~~~~~~~~~~p~~~~~~~aa  354 (489)
T PLN02483        318 GYIAGSK--------ELIQYLKRTCPAHLYATSMSPPAVQQVISA  354 (489)
T ss_pred             eEEEcCH--------HHHHHHHHhCccccccCCcCHHHHHHHHHH
Confidence            9998753        58888876532  1  12344555554443

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.86  E-value=1.2e-20  Score=175.05  Aligned_cols=246  Identities=16%  Similarity=0.152  Sum_probs=165.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCC-cHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      .+..+++|..|.+..+  ++. +|.+.+++.++++...  ...|.+..+ .+|.+.+++++    +. .+.+++++++|+
T Consensus        41 dg~~~lD~~s~~~~~~--lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~~-~~~~~v~~~~sg  112 (398)
T PRK03244         41 DGKEYLDLLGGIAVNA--LGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----GA-PEGGRVFFCNSG  112 (398)
T ss_pred             CCCEEEECCcCHhhcc--CCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----CC-CCCCEEEEeCch
Confidence            4677899988754322  333 7999999999887532  234654322 34555555443    31 135799999999


Q ss_pred             HHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHh-hCCCe------------EEEEeccCCCCCcCCHHHHHhhhccCce
Q 020968          120 TQAIEVILTVLARPG-ANILLPRPGFPYYEARAT-HSHLE------------VRHFDLLPAKGWEVDLDAVEALADENTV  185 (319)
Q Consensus       120 t~ai~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~-~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~  185 (319)
                      ++|+..+++....+| ++|+..+++|+.+...+. ..|..            +..++.       .|++.+++.+.++++
T Consensus       113 sea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~  185 (398)
T PRK03244        113 AEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTA  185 (398)
T ss_pred             HHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeE
Confidence            999999999766566 577777788987643333 22211            111111       378999998877788


Q ss_pred             EEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          186 ALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       186 ~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +|+++.++||+|.+++.++ +++|.++|+++|+++|+||+|.++...+..+ .+......+++   .+|||+++ +|+|+
T Consensus       186 aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~i  260 (398)
T PRK03244        186 AVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPI  260 (398)
T ss_pred             EEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCccc
Confidence            8999888999999987655 9999999999999999999999876655322 11112222223   37899986 89999


Q ss_pred             eEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          265 GWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      ||+++++        ++++.+... .....+.+++.|.++...+  +.++++.++
T Consensus       261 g~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~  307 (398)
T PRK03244        261 GACLAFG--------PAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLEN  307 (398)
T ss_pred             EEEEEcH--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence            9999864        466665542 2234467888888887754  234455443

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.86  E-value=3.7e-20  Score=171.17  Aligned_cols=210  Identities=16%  Similarity=0.165  Sum_probs=150.8

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR  141 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~  141 (319)
                      +..+...+++........+.+|+. +...+|++.++++.        ..++.+++++++.|+..++.+++++||+|+++.
T Consensus        46 ~~~~~~~~~~~~~~~~~~Y~r~~~-p~~~~le~~lA~l~--------g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~  116 (403)
T PRK07810         46 ESAAAAEAAFTGELDRFVYSRYGN-PTVSMFEERLRLIE--------GAEACFATASGMSAVFTALGALLGAGDRLVAAR  116 (403)
T ss_pred             CCHHHHHHHhccCcCCcceeCCCC-chHHHHHHHHHHHh--------CCCcEEEECChHHHHHHHHHHHhCCCCEEEEcc
Confidence            444444444432222222344543 45789999999998        345788999999999999999999999999988


Q ss_pred             CCC----cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968          142 PGF----PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI  217 (319)
Q Consensus       142 p~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~  217 (319)
                      ..|    ..+...++..|+++..++.       .|++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+
T Consensus       117 ~~~~~t~~~~~~~~~~~G~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~  186 (403)
T PRK07810        117 SLFGSCFVVCNEILPRWGVETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGA  186 (403)
T ss_pred             CCcchHHHHHHHHHHHcCcEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCC
Confidence            655    3344567788999988864       3889999999888999999999999999965   9999999999999


Q ss_pred             EEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhh-hhcCCc
Q 020968          218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFL-NISSDP  295 (319)
Q Consensus       218 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  295 (319)
                      ++|+|++|....+..    ++ ..   +..+++.|++|.++.+|.++ |+++++++       .+.++++... ......
T Consensus       187 ~vivD~a~a~~~~~~----~~-~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~-------~~~~~l~~~~~~~g~~~  251 (403)
T PRK07810        187 KVVLDNVFATPLLQR----GL-PL---GADVVVYSGTKHIDGQGRVLGGAILGDRE-------YIDGPVQKLMRHTGPAL  251 (403)
T ss_pred             EEEEECCCCccccCC----hh-hc---CCcEEEccCCceecCCcCceeEEEEeChH-------HHHHHHHHHHHHhCCCC
Confidence            999999998644321    11 11   23488999999999899998 66665431       2333454432 233455


Q ss_pred             chHHHHHHHH
Q 020968          296 ATFIQFLKSS  305 (319)
Q Consensus       296 ~~~~q~~~~~  305 (319)
                      +++.++++..
T Consensus       252 s~~~a~l~l~  261 (403)
T PRK07810        252 SAFNAWVLLK  261 (403)
T ss_pred             CHHHHHHHHh
Confidence            6666665443

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.86  E-value=5.7e-20  Score=168.64  Aligned_cols=187  Identities=17%  Similarity=0.211  Sum_probs=143.0

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCe
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLE  157 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~  157 (319)
                      +|+ .+....|++++|++.        ..+++++++|+++|+..++.+++++||+|+++.|.|......    ....|++
T Consensus        49 R~~-npt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~  119 (388)
T PRK08861         49 RSG-NPNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFK  119 (388)
T ss_pred             CCC-CchHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeE
Confidence            444 346789999999998        358999999999999999999999999999999999864332    2345667


Q ss_pred             EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968          158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP  237 (319)
Q Consensus       158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~  237 (319)
                      +..++.       .|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|....+.  .  +
T Consensus       120 v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~--~--p  185 (388)
T PRK08861        120 VQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ--K--P  185 (388)
T ss_pred             EEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC--C--C
Confidence            766642       4889999999889999999999999999987   678888999999999999999864432  1  2


Q ss_pred             CcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL  302 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~  302 (319)
                      + .+.   -.+++.|++|.++.+ +...|++++.++       ++.++++..+.. ....+++..+.
T Consensus       186 l-~~G---aDivv~S~tK~l~G~~d~~gG~i~~~~~-------~~~~~~~~~~~~~G~~~~p~~a~l  241 (388)
T PRK08861        186 L-ELG---ADFVIHSTTKYINGHSDVIGGVLITKTK-------EHAEELAWWGNCIGATGTPFDSYM  241 (388)
T ss_pred             c-ccC---CCEEEeecceeccCCCcceeEEEEecHH-------HHHHHHHHHHhccCCCCChHHHHH
Confidence            2 122   238999999998875 578898887542       466667655543 34445555443

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.86  E-value=3.2e-20  Score=171.15  Aligned_cols=173  Identities=17%  Similarity=0.197  Sum_probs=134.4

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCe
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLE  157 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~  157 (319)
                      +|+ .+...+|++.+|++++        .+..+++++++.|+..++.+++++||+|+++.|.|...    ...+...|++
T Consensus        55 r~~-~p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~  125 (391)
T TIGR01328        55 RLG-NPTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQ  125 (391)
T ss_pred             CCC-CchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeE
Confidence            444 3456789999999983        34578888889999999999999999999999988643    3445668888


Q ss_pred             EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968          158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP  237 (319)
Q Consensus       158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~  237 (319)
                      +..++.+       |++++++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|.......    +
T Consensus       126 ~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~----~  191 (391)
T TIGR01328       126 VDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN----P  191 (391)
T ss_pred             EEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC----c
Confidence            8877752       789999999888999999999999999966   8889999999999999999998643321    1


Q ss_pred             CcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  288 (319)
                      +. .   ...+++.|+||.++++|.++|++++.+       ++++++++..
T Consensus       192 ~~-~---g~Divv~S~sK~lgg~g~~~gG~v~~~-------~~li~~l~~~  231 (391)
T TIGR01328       192 VA-L---GVDVVVHSATKYIGGHGDVVAGLICGK-------AELLQQIRMV  231 (391)
T ss_pred             hh-c---CCCEEEccccccccCCCCceEEEEEcC-------HHHHHHHHHH
Confidence            21 1   223889999999999998865444433       2477777653

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.86  E-value=4.7e-20  Score=168.61  Aligned_cols=190  Identities=16%  Similarity=0.121  Sum_probs=140.7

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCC-cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL  139 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~  139 (319)
                      .++++.+.+++.+.+..   ..|... .-.+++++.+++++    |.. ..+.+++++|+++++..++.+++++||+|++
T Consensus         8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~----g~~-~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~   79 (356)
T cd06451           8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF----QTE-NGLTFLLSGSGTGAMEAALSNLLEPGDKVLV   79 (356)
T ss_pred             cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh----cCC-CCCEEEEecCcHHHHHHHHHHhCCCCCEEEE
Confidence            47788999988654321   122211 11446666666666    221 3345788999999999999999999999999


Q ss_pred             cCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968          140 PRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG  216 (319)
Q Consensus       140 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~  216 (319)
                      +.++|..  +...++..|++++.++.++  ++.+|++++++.+++ +++++++++|+||+|.+++   +++|.++|+++|
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~  154 (356)
T cd06451          80 GVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKHD  154 (356)
T ss_pred             ecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhcC
Confidence            9887765  4567888999999998754  357899999999986 8899999999999999977   778889999999


Q ss_pred             CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +++++|++|..    +..+.++...   +..+++.|++|+++.| .++||++.++
T Consensus       155 ~~li~D~~~~~----g~~~~~~~~~---~~d~~~~s~~K~l~~p-~g~G~l~~~~  201 (356)
T cd06451         155 ALLIVDAVSSL----GGEPFRMDEW---GVDVAYTGSQKALGAP-PGLGPIAFSE  201 (356)
T ss_pred             CEEEEeeehhc----cCcccccccc---CccEEEecCchhccCC-CCcceeEECH
Confidence            99999998763    2122222222   2236678999998765 3589999853

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.86  E-value=5.7e-20  Score=169.28  Aligned_cols=201  Identities=15%  Similarity=0.164  Sum_probs=150.5

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHhhcCC----CCCCCC----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .|+.+...    +++|+.+.+++.+.+....    ...|..    ..+..++|+.++++++.    . ..++|++|+|++
T Consensus         2 yld~a~~~----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~-~~~~v~~~~g~t   72 (376)
T TIGR01977         2 YFDNAATT----YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA----P-SSAHVVFTNNAT   72 (376)
T ss_pred             CccCcccC----CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc----C-CCCeEEEeCCHH
Confidence            45555432    5778899999988776532    112322    14567888888888832    1 335899999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC  196 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt  196 (319)
                      ++++.++.+++++||+|++..+.|..+.    ..++..|.+++.++.+.  ++.+|+++++++++++++++++++|+|||
T Consensus        73 ~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~t  150 (376)
T TIGR01977        73 TALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVT  150 (376)
T ss_pred             HHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCc
Confidence            9999999999899999999999987653    35566799999888753  45689999999998889999999999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |.+++   +++|.++|+++|+++|+|++++...    .+..+..   ..-.+++.|++|+++.|. .+|.+++.+
T Consensus       151 G~~~~---~~~i~~l~~~~~~~livD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~l~~p~-g~g~l~~~~  214 (376)
T TIGR01977       151 GTILP---IEEIGELAQENGIFFILDAAQTAGV----IPIDMTE---LAIDMLAFTGHKGLLGPQ-GTGGLYIRE  214 (376)
T ss_pred             cccCC---HHHHHHHHHHcCCEEEEEhhhccCc----cCCCchh---cCCCEEEecccccccCCC-CceEEEEcC
Confidence            99987   6788899999999999999997632    1112221   123488999999976553 356665544

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK06460 hypothetical protein; Provisional

Probab=99.86  E-value=6.1e-20  Score=168.54  Aligned_cols=172  Identities=16%  Similarity=0.179  Sum_probs=128.2

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC----cchHHHHhhCCCeEEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF----PYYEARATHSHLEVRHF  161 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~----~~~~~~~~~~g~~~~~~  161 (319)
                      ++...+|++.++++++.      . ..++ ++++++|+..++.+++++||+|+++.|.|    ..+...++..|+++..+
T Consensus        44 ~p~~~~L~~~lA~l~g~------~-~~v~-~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~  115 (376)
T PRK06460         44 NPTVLELTKKIVELENA------E-MGVA-FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS  115 (376)
T ss_pred             CccHHHHHHHHHHHhCC------C-cEEE-eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence            45778999999999832      2 3344 45567999999999999999999998655    34556778889998877


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      +.+       +.+.+++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..... .   .+   +
T Consensus       116 ~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~-~---~~---l  178 (376)
T PRK06460        116 NPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPIN-Q---KP---L  178 (376)
T ss_pred             CCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcccc-C---Ch---h
Confidence            642       233455555678899999999999999988   56788899999999999999976321 1   11   1


Q ss_pred             CCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          242 GSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                      . .+..+++.|+||+++.+ |.++||++++        ++++++++..+..
T Consensus       179 ~-~~~divv~S~sK~l~G~~~~~~G~~~~~--------~~l~~~l~~~~~~  220 (376)
T PRK06460        179 E-LGADIVVHSASKFLAGHNDVIAGLAAGY--------GKLLNVIDQMRRT  220 (376)
T ss_pred             h-cCCCEEEeecceeccCCCCceEEEEecC--------HHHHHHHHHHHHh
Confidence            1 13459999999998644 4789999874        2577877766553

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.85  E-value=1.3e-19  Score=167.11  Aligned_cols=188  Identities=15%  Similarity=0.114  Sum_probs=136.0

Q ss_pred             CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCC
Q 020968           81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHL  156 (319)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~  156 (319)
                      .+|+ ++...+|++.+++++.        .+..+++++++.|+..++.+++++||+|+++.|.|......+    ...|+
T Consensus        56 ~r~~-~pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi  126 (386)
T PRK06767         56 SRLG-NPTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI  126 (386)
T ss_pred             cCCC-CcchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence            3444 4467899999999983        345666667778999999999999999999999887654433    34455


Q ss_pred             eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC
Q 020968          157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV  236 (319)
Q Consensus       157 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~  236 (319)
                      ++..++.       .|++++++++++++++|++++|+||||.+++   +++|.++|+++|+++++|++|....+.    .
T Consensus       127 ~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~----~  192 (386)
T PRK06767        127 THSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ----R  192 (386)
T ss_pred             EEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----C
Confidence            5544432       3789999999888999999999999999976   788899999999999999999753322    1


Q ss_pred             CCcccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHH-Hhhh-hcCCcchHHHHHH
Q 020968          237 PMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIK-SFLN-ISSDPATFIQFLK  303 (319)
Q Consensus       237 ~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~q~~~  303 (319)
                      ++. .   ...+++.|+||.++.+|.|+ ||+++++        +++.++. ..+. .....+++.++++
T Consensus       193 pl~-~---g~Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~  250 (386)
T PRK06767        193 PLE-L---GCDAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLL  250 (386)
T ss_pred             chh-c---CCcEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            121 1   22388899999999999986 8888754        3555443 3333 2333455555443

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.85  E-value=5e-20  Score=169.50  Aligned_cols=190  Identities=23%  Similarity=0.232  Sum_probs=144.7

Q ss_pred             CCcHHHHHHHHHHhhcCCCC-CCCC-------CcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEeCCHHHHHHHHHHHhcC
Q 020968           62 RTASVAVDAIVHSVRSARFN-CYSS-------TVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVLAR  132 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~-~Y~~-------~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~~G~t~ai~~~~~~l~~  132 (319)
                      ++++.+.+++.+.+.....+ ..+.       .....++|+.+++++.      .+ ++++++|+|++++++.++.++..
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~~   83 (373)
T cd06453          10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLGR   83 (373)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence            66788999998876432110 0000       1234578888888873      34 67899999999999999999977


Q ss_pred             ---CCCEEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968          133 ---PGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       133 ---~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l  205 (319)
                         +|++|+++++.|...    ...++..|++++.++.+  .++.+|++++++.+.+++++|++++++||||.+.+   +
T Consensus        84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~  158 (373)
T cd06453          84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V  158 (373)
T ss_pred             cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence               899999999999773    34556789999999875  34579999999999888999999999999999977   7


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ++|+++|+++|+++++|++|....    .+..+...   ...+++.|++|+++.  .++||+++++
T Consensus       159 ~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~--~g~g~~~~~~  215 (373)
T cd06453         159 KEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDL---GCDFLAFSGHKMLGP--TGIGVLYGKE  215 (373)
T ss_pred             HHHHHHHHHcCCEEEEEhhhhcCc----eeeecccc---CCCEEEeccccccCC--CCcEEEEEch
Confidence            889999999999999999987422    11122222   223777899999765  5589998854

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.85  E-value=7.3e-20  Score=167.95  Aligned_cols=186  Identities=17%  Similarity=0.187  Sum_probs=144.7

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEE
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRH  160 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~  160 (319)
                      ..+...+|++.+++++        ..+..++++++++|+..++.+++++||+|+++.+.|.....    .+...|+++..
T Consensus        38 ~~p~~~~le~~la~l~--------g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~  109 (369)
T cd00614          38 GNPTVDALEKKLAALE--------GGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF  109 (369)
T ss_pred             CChhHHHHHHHHHHHH--------CCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence            3456789999999987        23577888899999999999999999999999999987543    34577888877


Q ss_pred             EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      ++.+       |++++++++++++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|+...+.    .++  
T Consensus       110 v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~--  173 (369)
T cd00614         110 VDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPL--  173 (369)
T ss_pred             eCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chh--
Confidence            7642       688999999888999999999999999966   889999999999999999999864431    111  


Q ss_pred             cCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHH
Q 020968          241 FGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLK  303 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~  303 (319)
                        ..+..+++.|+||.++.+| .+.||++++++       +++++++.... .....+++.++++
T Consensus       174 --~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-------~l~~~l~~~~~~~g~~~~p~~a~~~  229 (369)
T cd00614         174 --ELGADIVVHSATKYIGGHSDVIAGVVVGSGE-------ALIQRLRFLRLALGTILSPFDAWLL  229 (369)
T ss_pred             --hhCCcEEEeccceeccCCCCceEEEEEeCcH-------HHHHHHHHHHHhhCCCCCHHHHHHH
Confidence              1133589999999998876 88999998542       47777776654 3344566655554

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.85  E-value=1.8e-19  Score=165.86  Aligned_cols=175  Identities=22%  Similarity=0.312  Sum_probs=136.7

Q ss_pred             CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCC
Q 020968           81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHL  156 (319)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~  156 (319)
                      .+|+ .+...+|++.+++++        +.+.+++++++++|+..++.+++++||+|+++.+.|.+.    ...+...|+
T Consensus        49 ~r~~-~p~~~~le~~la~l~--------g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~  119 (380)
T TIGR01325        49 SRYA-NPTVAAFEERIAALE--------GAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI  119 (380)
T ss_pred             ecCC-CchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence            3454 345789999999987        235788999999999999999999999999999888653    345677899


Q ss_pred             eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC
Q 020968          157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV  236 (319)
Q Consensus       157 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~  236 (319)
                      ++..++.+       |++++++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|....+..    
T Consensus       120 ~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~----  185 (380)
T TIGR01325       120 EVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ----  185 (380)
T ss_pred             EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC----
Confidence            98887752       788999988888999999999999999965   8999999999999999999998644321    


Q ss_pred             CCcccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          237 PMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       237 ~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      ++ ..   ...+++.|+||.++.+|.++ |++++++        +++++++....
T Consensus       186 pl-~~---g~Divv~S~sK~l~g~g~~~gG~vv~~~--------~~~~~l~~~~~  228 (380)
T TIGR01325       186 PL-KL---GADVVVYSATKHIDGQGRVMGGVIAGSE--------ELMAEVAVYLR  228 (380)
T ss_pred             ch-hh---CCCEEEeeccceecCCCCeEEEEEEeCH--------HHHHHHHHHHH
Confidence            11 11   23488899999999999887 5555432        46666665543

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.85  E-value=3e-19  Score=164.24  Aligned_cols=217  Identities=24%  Similarity=0.305  Sum_probs=169.6

Q ss_pred             cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CC--CCCC----CcCCHHHHHHHHH
Q 020968           27 TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FN--CYSS----TVGILPARRAIAD   98 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~--~Y~~----~~g~~~lr~~ia~   98 (319)
                      .+|+-+..+.+..    +.+++.|+.+.-.     ..|..+.+++.+......  .+  .|..    +..+++.|+.+++
T Consensus         7 ~~r~~fp~l~~~~----~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~   77 (405)
T COG0520           7 AVRADFPALKREV----GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVAR   77 (405)
T ss_pred             HHHhhCHHHhhcc----CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHH
Confidence            3566666554433    5678889888754     468899999998764321  11  1111    1235788888999


Q ss_pred             HHhhhCCCCCC-CCcEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCc
Q 020968           99 YLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVL---ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWE  170 (319)
Q Consensus        99 ~~~~~~g~~~~-~~~i~~~~G~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~  170 (319)
                      ++      +.+ .++|++|.|+|+++++++.++   .++||+|++..-.|++    +...++..|+++..++.+  +++.
T Consensus        78 ~~------~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~  149 (405)
T COG0520          78 FL------NADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGL  149 (405)
T ss_pred             Hh------CCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCC
Confidence            88      446 589999999999999999998   5899999999988865    566667789999999986  4457


Q ss_pred             CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      ++.+.++..+++++++|.+++.+|.||.+.   ++++|+++|+++|+++++|.+++.    ++.+..++.++-+   +++
T Consensus       150 ~~~~~~~~~i~~~Tklvais~vSn~tG~~~---pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~a  219 (405)
T COG0520         150 LDLDALEKLITPKTKLVALSHVSNVTGTVN---PVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLA  219 (405)
T ss_pred             cCHHHHHHhcCCCceEEEEECccccccccc---hHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEE
Confidence            999999999999999999999999999994   599999999999999999999987    4455556555443   999


Q ss_pred             ecCccccCCCcceeeEEEeeC
Q 020968          251 GSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .|.+|++..| ..+|.+.+++
T Consensus       220 fsgHKwl~gP-~GiGvLy~r~  239 (405)
T COG0520         220 FSGHKWLLGP-TGIGVLYVRK  239 (405)
T ss_pred             EcccccccCC-CceEEEEEch
Confidence            9999966666 2378888754

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.85  E-value=4e-19  Score=165.13  Aligned_cols=231  Identities=16%  Similarity=0.171  Sum_probs=158.7

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      ..+++|+.++   |..+...|.+++++.++++.....      .|+......+|++.+++++.        .+..+++++
T Consensus        45 ~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~s  113 (402)
T TIGR01821        45 KDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFTS  113 (402)
T ss_pred             eeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEECc
Confidence            5688999988   445788999999999988763221      12333345678888888872        235666666


Q ss_pred             HHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCC
Q 020968          119 CTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p  192 (319)
                      +++++..++..+..  +|+.|+.....|......+...|.++..++.       .|.+++++.++    +++++|++++|
T Consensus       114 G~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~  186 (402)
T TIGR01821       114 GYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESV  186 (402)
T ss_pred             hHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence            78888888887764  6777777666776666667777877655432       36777777664    25688999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||+|.+.+   +++|.++|+++|+++|+||+|....++........... .....++++||||.|+++|   ||+++++
T Consensus       187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~  260 (402)
T TIGR01821       187 YSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASR  260 (402)
T ss_pred             CCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCH
Confidence            999999976   89999999999999999999984433321111111111 1123588899999999888   9988753


Q ss_pred             CCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968          272 PNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK  307 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l  307 (319)
                              ++++.++.....   +...++..+.++..++
T Consensus       261 --------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL  291 (402)
T TIGR01821       261 --------KLIDAIRSYAPGFIFTTSLPPAIAAGATASI  291 (402)
T ss_pred             --------HHHHHHHHhCcCceecCcCCHHHHHHHHHHH
Confidence                    477777654321   2345666666655443

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.85  E-value=1.6e-19  Score=166.17  Aligned_cols=179  Identities=16%  Similarity=0.157  Sum_probs=137.5

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---hhCCCeEEEEe
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA---THSHLEVRHFD  162 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~  162 (319)
                      .+...+|++.+++++        ..+++++++|+++|+..++.+++++||+|+++.|.|..+...+   ...|+++..+.
T Consensus        52 np~~~~lE~~lA~l~--------g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~  123 (385)
T PRK08574         52 NPTLRPLEEALAKLE--------GGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY  123 (385)
T ss_pred             CccHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence            346789999999998        3467888999999999999999999999999999998876655   44576665543


Q ss_pred             ccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          163 LLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                              +|++++++++++ ++++|++++|+||||.+++   +++|+++|+++|+++|+|++|......    .++ ..
T Consensus       124 --------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l-~~  187 (385)
T PRK08574        124 --------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY----RPL-RH  187 (385)
T ss_pred             --------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----Chh-hh
Confidence                    368899999987 8999999999999999977   788999999999999999999642211    111 11


Q ss_pred             CCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchH
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATF  298 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  298 (319)
                         +..+++.|+||.++.+|-.+ |++++.++       ++.++++..+.. ....+++
T Consensus       188 ---GaDivv~S~sK~l~g~~d~~gG~vi~~~~-------~~~~~~~~~~~~~g~~~~p~  236 (385)
T PRK08574        188 ---GADFVVHSLTKYIAGHNDVVGGVAVAWSG-------EFLEELWEWRRRLGTIMQPF  236 (385)
T ss_pred             ---CCcEEEeeCceeecCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHH
Confidence               23499999999998888765 65666442       467776655543 3344444

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.85  E-value=1.8e-19  Score=165.34  Aligned_cols=195  Identities=20%  Similarity=0.332  Sum_probs=145.9

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP  142 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p  142 (319)
                      .+...+++.+.+.++..  ++.    ..+++++.+++.+..    +.+++++|+|+++|+.+++.++ .++||+|+++.+
T Consensus        10 ~~~e~~a~~~~~~~~~~--~~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~   79 (376)
T TIGR02379        10 TGQELEYIAEAISEGKL--SGD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY   79 (376)
T ss_pred             CHHHHHHHHHHHHcCCc--cCC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence            45667888888776543  221    233444444444432    4568999999999999999987 789999999999


Q ss_pred             CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      +|..+...+...|++++.+++++ +++.+|++++++++++++++|+   |+||+|...+   +++|.++|+++|++||+|
T Consensus        80 t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD  152 (376)
T TIGR02379        80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIED  152 (376)
T ss_pred             CcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence            99999888899999999999865 4578999999999988888876   5668898865   789999999999999999


Q ss_pred             CCCCCcc-CCCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          223 EVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       223 ~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      ++|+... +++...   ..+..    +.+.||  +|.+ .+|.+.|+++++++       ++.++++..+.
T Consensus       153 aa~~~g~~~~~~~~---g~~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~~-------~~~~~~~~~~~  208 (376)
T TIGR02379       153 AAQGVMSTYKGRAL---GSIGH----LGTFSFHETKNY-TSGGEGGALLINDQ-------AFIERAEIIRE  208 (376)
T ss_pred             CccccCCccCCccc---CCCCC----EEEEeCCCCCcC-cccCCceEEEECCH-------HHHHHHHHHHH
Confidence            9998765 444322   12211    333443  3664 56778999998763       58888877654

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.84  E-value=7.5e-20  Score=170.23  Aligned_cols=159  Identities=23%  Similarity=0.198  Sum_probs=131.6

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  162 (319)
                      +...+|++.+++++        ..+..++++++++|+..++.+++++||+|+++.+.|.+.    ...+...|++++.++
T Consensus        57 p~~~~le~~lA~l~--------g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~  128 (418)
T TIGR01326        57 PTTDVLEQRIAALE--------GGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVD  128 (418)
T ss_pred             hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence            45678999999988        235789999999999999999999999999999998653    345677899988887


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       .|++.+++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+....    ..++    
T Consensus       129 ~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~~~l----  190 (418)
T TIGR01326       129 P-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----CRPI----  190 (418)
T ss_pred             C-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----CCch----
Confidence            4       2889999999888999999999999999965   88999999999999999999974221    1111    


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ..+..+++.|+||.++.+|+|+||++++.
T Consensus       191 ~~g~Divv~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       191 DHGADIVVHSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             hcCCeEEEECccccccCCccceEEEEEec
Confidence            12356999999999999999999999864

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.84  E-value=8.5e-20  Score=162.50  Aligned_cols=170  Identities=19%  Similarity=0.184  Sum_probs=133.4

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      |..-+.++++.+|++++.       .+.+++++|+++++..++.+++++||+|+++.++|.+....+...|++++.++..
T Consensus        57 ~~g~i~~~~~~~A~~~ga-------~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~  129 (294)
T cd00615          57 PTGPIKEAQELAARAFGA-------KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPE  129 (294)
T ss_pred             CChHHHHHHHHHHHHhCC-------CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence            444578899999998832       2345569999999999999999999999999999999888889999999888765


Q ss_pred             CCCC----CcCCHHHHHhhhc--cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCC
Q 020968          165 PAKG----WEVDLDAVEALAD--ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVP  237 (319)
Q Consensus       165 ~~~~----~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~  237 (319)
                      ...+    ..+|+++++++++  ++++++++++| |++|.+++   +++|+++|+++|+++|+|++|+. +.+.+..+..
T Consensus       130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~  205 (294)
T cd00615         130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS  205 (294)
T ss_pred             cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence            4433    3689999999986  36789999998 68999976   88999999999999999999985 3343322111


Q ss_pred             CcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                         ....+..+++.|++|+  ++|++.|+++..
T Consensus       206 ---~~~~~~div~~S~hK~--l~g~~~~~~l~~  233 (294)
T cd00615         206 ---AAMAGADIVVQSTHKT--LPALTQGSMIHV  233 (294)
T ss_pred             ---hhhcCCcEEEEchhcc--cchHhHHHHHHh
Confidence               1122456999999998  588887666543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.84  E-value=4e-19  Score=163.01  Aligned_cols=206  Identities=16%  Similarity=0.153  Sum_probs=146.9

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL  138 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl  138 (319)
                      ++.++.+.+++..... . ...|+.  .++...||+.++++.        ..+++++++|+++|+..++.+++++||+|+
T Consensus        35 ~~~~~~~~~~~~~~~~-~-~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv  104 (394)
T PRK09028         35 FDTVAEMRHAAKNRAN-G-EMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL  104 (394)
T ss_pred             cCCHHHHHHHhccCcc-C-CceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            4555666655543221 1 124655  334579999999886        235789999999999999999999999999


Q ss_pred             EcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968          139 LPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK  214 (319)
Q Consensus       139 ~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  214 (319)
                      +++|.|.++...    +...|+++..++..       +.+.+++++++++++|++++|+||||.+   .++++|+++|++
T Consensus       105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~  174 (394)
T PRK09028        105 MVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE  174 (394)
T ss_pred             EECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence            999999776543    34577777765431       5578898888899999999999999988   779999999999


Q ss_pred             cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhh-hc
Q 020968          215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLN-IS  292 (319)
Q Consensus       215 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~  292 (319)
                      +|+++++|++|+....    ..++ .+   +-.+++.|.+|+++.+ ++..|+++ .+       +++.++++.... ..
T Consensus       175 ~g~~lvvD~t~a~p~~----~~Pl-~~---GaDivv~S~tK~l~Gh~d~~~G~~~-~~-------~~~~~~l~~~~~~~G  238 (394)
T PRK09028        175 HDIVVMLDNTWASPIN----SRPF-EM---GVDISIQAATKYIVGHSDVMLGTAT-AN-------EKHWDQLREHSYLMG  238 (394)
T ss_pred             cCCEEEEECCcccccc----CCcc-cc---CceEEEEeCCeEecCCCCEEEEEEE-CC-------HHHHHHHHHHHHhcC
Confidence            9999999999986221    1122 12   3349999999999776 45566554 33       235555554433 23


Q ss_pred             CCcchHHHHH
Q 020968          293 SDPATFIQFL  302 (319)
Q Consensus       293 ~~~~~~~q~~  302 (319)
                      ...++...+.
T Consensus       239 ~~~~p~~a~l  248 (394)
T PRK09028        239 QCTSPDDVYL  248 (394)
T ss_pred             CCCCHHHHHH
Confidence            3445555443

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.84  E-value=6.1e-19  Score=164.17  Aligned_cols=232  Identities=16%  Similarity=0.148  Sum_probs=155.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +.++++|+..|.   ..+..+|.+.+++.+++.....      ..|++.....+|++.+++++.       .++ .++.+
T Consensus        45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~~-~~~~~  113 (407)
T PRK09064         45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KEA-ALVFT  113 (407)
T ss_pred             CceEEEEECCCC---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CCc-EEEEC
Confidence            467899999983   4578889999999988765322      123344456788888888772       234 44445


Q ss_pred             CHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcC
Q 020968          118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN  191 (319)
Q Consensus       118 G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~  191 (319)
                      ++++++..++..+..  +++.|+.....|......+...+.++..++.       .|++.+++.++    +++++|++++
T Consensus       114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~  186 (407)
T PRK09064        114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES  186 (407)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence            556677777776654  6776666666666666666777777654442       37778877765    4578999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ++||+|.+.+   +++|.++|+++|+++|+||+|....++............ ....|+++||||.|+++|   ||++++
T Consensus       187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~  260 (407)
T PRK09064        187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS  260 (407)
T ss_pred             CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence            9999999966   899999999999999999999843333221111111111 133688999999999888   998874


Q ss_pred             CCCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968          271 DPNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK  307 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l  307 (319)
                      .        ++++.++.....   +...++..+.++...+
T Consensus       261 ~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al  292 (407)
T PRK09064        261 A--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASI  292 (407)
T ss_pred             H--------HHHHHHHHhCccccccCcCCHHHHHHHHHHH
Confidence            3        467766654321   2344555665554433

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.84  E-value=1.4e-19  Score=158.96  Aligned_cols=266  Identities=20%  Similarity=0.270  Sum_probs=154.9

Q ss_pred             ccccHHHHHHHHHHHhhhcCCCCe-EeccCCCCCCCCCCCCcHHHHHHHHH--Hh-hcCCCCCC-CCCcCCHHHHHHHHH
Q 020968           24 SGITVRGVLNSLLENLNKNDTRPL-IPLGHGDPSAFPSFRTASVAVDAIVH--SV-RSARFNCY-SSTVGILPARRAIAD   98 (319)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~-i~l~~g~~~~~~~~~~~~~~~~a~~~--~~-~~~~~~~Y-~~~~g~~~lr~~ia~   98 (319)
                      +..++.+..+++++.+.+.+..++ +||+-|-|.. .++.+...+......  .. +.-+..+| +...|++++|+.+++
T Consensus         2 s~~eL~~~~~~l~~~y~~~ka~~L~LdmtRGKPs~-eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~   80 (425)
T PF12897_consen    2 SKEELAALLAELRKQYEELKAKGLKLDMTRGKPSP-EQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAE   80 (425)
T ss_dssp             ----HHHCHHHHHHHHHHHHHTT--EES---S--H-HHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCH-HHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHH
Confidence            345666666666666666656665 7888888651 011111112111100  00 11134689 888899999999999


Q ss_pred             HHhhhCCCCCCCCcEEEeCCHHHHH-HHHH-HHh----c--------CCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           99 YLNRDLPYKLSPDDVYLTLGCTQAI-EVIL-TVL----A--------RPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        99 ~~~~~~g~~~~~~~i~~~~G~t~ai-~~~~-~~l----~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      ++      .++.++|++..+++-.| +-++ .++    .        .+.-+.++|.|.|..+..+++..|++.+.||+.
T Consensus        81 ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~  154 (425)
T PF12897_consen   81 LL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPVPMT  154 (425)
T ss_dssp             HH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEEEEE
T ss_pred             Hh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEecCCC
Confidence            99      67999999987765443 2222 222    1        113478999999999999999999999999997


Q ss_pred             CCCCCcCCHHHHHhhhc--cCceEEEEcCC--CCccccccCHHHHHHHHHH-HHHcCCEEEEeCCCCCccCC-CCCCCC-
Q 020968          165 PAKGWEVDLDAVEALAD--ENTVALVIINP--GNPCGNVYTYQHLQKIAET-AKKLGIMVIADEVYDHLAFG-NTPFVP-  237 (319)
Q Consensus       165 ~~~~~~~d~~~l~~~l~--~~~~~v~l~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~li~D~a~~~~~~~-~~~~~~-  237 (319)
                      ++   ++|.+.+++++.  +..+.++ |.|  +||||++||.+.+++++.+ ....++.|+.|++|.-.... +.+... 
T Consensus       155 ~d---GPDmD~Ve~LV~~D~svKGiW-cVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~  230 (425)
T PF12897_consen  155 ED---GPDMDMVEELVAEDPSVKGIW-CVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDAL  230 (425)
T ss_dssp             TT---EE-HHHHHHHTHTSTTEEEEE-E-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS----
T ss_pred             CC---CCCHHHHHHHHhcCCccceEE-eCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhh
Confidence            64   589999999984  3445554 666  8999999999999999998 33579999999999976652 222111 


Q ss_pred             --Ccc----cCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcc
Q 020968          238 --MGV----FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKR  310 (319)
Q Consensus       238 --~~~----~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~  310 (319)
                        +..    ....++++.+.|.||. ..||.+|+++.++.        +-++.++++.+. +.++..+.|..-.+ ++++
T Consensus       231 ~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~~tIgpdKvNQLRHvr-ff~d  300 (425)
T PF12897_consen  231 LNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSVQTIGPDKVNQLRHVR-FFKD  300 (425)
T ss_dssp             --HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHHH-S---HHHHHHHHH-HHHS
T ss_pred             hHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcCceeCccHHHHHHHHH-HhcC
Confidence              111    2455789999999999 79999999999864        456667766663 67899999999888 4443

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.84  E-value=2.3e-19  Score=164.13  Aligned_cols=196  Identities=16%  Similarity=0.156  Sum_probs=148.1

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      -+.+||-+.-- +......+++++.+++.++.+.     |.   +.+++++++++++.+.+|    .+++++++|+|+|+
T Consensus         7 ~~~~ina~g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al   73 (363)
T TIGR01437         7 LKKVINASGKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGI   73 (363)
T ss_pred             CceEEECCcEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHH
Confidence            45566655333 2222245889999999988643     32   345777777777776554    35789999999999


Q ss_pred             HHHHHHhcCCCC---------------EEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968          124 EVILTVLARPGA---------------NILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT  184 (319)
Q Consensus       124 ~~~~~~l~~~gd---------------~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  184 (319)
                      ++++.+++++||               +|+++.|.|..|    ...+...|+++++++.+    +.+|++++++++++++
T Consensus        74 ~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t  149 (363)
T TIGR01437        74 AQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKT  149 (363)
T ss_pred             HHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhc
Confidence            999999999988               899999888765    46778889999888752    3599999999999888


Q ss_pred             eEEE-EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968          185 VALV-IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       185 ~~v~-l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      ++++ +++|+||+|.+.+   +++|+++|+++|+++++|++|+.-.      .....+.   -.+++.|++|++  +|++
T Consensus       150 ~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g---~D~~~~S~~K~l--~gp~  215 (363)
T TIGR01437       150 AAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLG---ADLVIYSGAKAI--EGPT  215 (363)
T ss_pred             eEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch------HHHHHcC---CCEEEEeCCccc--CCCc
Confidence            8766 5678999999876   7789999999999999999997211      1111221   238889999984  6778


Q ss_pred             eeEEEee
Q 020968          264 LGWLVTS  270 (319)
Q Consensus       264 ~G~i~~~  270 (319)
                      .|+++++
T Consensus       216 ~G~l~~~  222 (363)
T TIGR01437       216 SGLVLGK  222 (363)
T ss_pred             eEEEEEc
Confidence            9998874

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.83  E-value=3.1e-19  Score=159.70  Aligned_cols=205  Identities=18%  Similarity=0.211  Sum_probs=169.2

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC----CCCCC--CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      +.+.+.+.|+.+..+     +.++.+.+++...+....    ...|+  ...+.++.|+.+|+++      +.++.+|++
T Consensus        39 ~~~~~~vyld~~at~-----p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiF  107 (428)
T KOG1549|consen   39 HHGTRPVYLDNQATG-----PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVF  107 (428)
T ss_pred             cCCCccEEEecCcCC-----CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEE
Confidence            457789999999854     788999999998876531    11133  2334788999999999      558888999


Q ss_pred             eCCHHHHHHHHHHHhc-CCCC----EEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          116 TLGCTQAIEVILTVLA-RPGA----NILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~-~~gd----~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      |+|+|++++++++.+. ..++    +|++..-.|++...   ..+..|+++..+|+.  ..+.+|.+.+++.++++++++
T Consensus       108 ts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv  185 (428)
T KOG1549|consen  108 TSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLV  185 (428)
T ss_pred             eCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEE
Confidence            9999999999999874 3455    89998888877654   446778999999986  445789999999999999999


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      .+.+.+|.+|++.|   +++|+++|+++++.+++|.|++-    |+.+..+..++.+   ++..|.+|+|+.+|  +|++
T Consensus       186 ~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaL  253 (428)
T KOG1549|consen  186 SIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGAL  253 (428)
T ss_pred             EEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEE
Confidence            99999999999966   99999999999999999999987    6666777777654   88889999999999  8998


Q ss_pred             EeeC
Q 020968          268 VTSD  271 (319)
Q Consensus       268 ~~~~  271 (319)
                      .+..
T Consensus       254 Yvr~  257 (428)
T KOG1549|consen  254 YVRR  257 (428)
T ss_pred             EEcc
Confidence            8763

>PRK14012 cysteine desulfurase; Provisional

Probab=99.83  E-value=4.5e-19  Score=164.84  Aligned_cols=201  Identities=19%  Similarity=0.210  Sum_probs=150.4

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhh--cCCCCCC--CC------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVR--SARFNCY--SS------TVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .+.|+.+...     ++++.+.+++.+.+.  .......  ..      ....+++|+.+++++      +.++++++++
T Consensus         4 ~iyld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~   72 (404)
T PRK14012          4 PIYLDYSATT-----PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFT   72 (404)
T ss_pred             eEEecCcCCC-----CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEe
Confidence            3678877754     677889999988765  2111110  00      123456778888777      4467889999


Q ss_pred             CCHHHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEE
Q 020968          117 LGCTQAIEVILTVLA----RPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI  189 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l  189 (319)
                      +|+|++++.++.++.    ++||+|+++.+.|+.+...+   +..|++++.++.++  ++.+|++.++++++++++++++
T Consensus        73 ~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~  150 (404)
T PRK14012         73 SGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSI  150 (404)
T ss_pred             CCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEE
Confidence            999999999988764    78999999999997765444   34699999888753  4578999999999988999999


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      ++++||||.+.+   +++|.++|+++|+++|+|++++.    +..+..+....   -.+++.|++|.++ |+ ++|++++
T Consensus       151 ~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~---~D~~~~s~~K~~g-p~-g~G~l~~  218 (404)
T PRK14012        151 MHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLK---VDLMSFSAHKIYG-PK-GIGALYV  218 (404)
T ss_pred             ECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCC---CCEEEEehhhccC-CC-ceEEEEE
Confidence            999999999965   88999999999999999999975    22222333222   2377889999754 44 6899887


Q ss_pred             eCC
Q 020968          270 SDP  272 (319)
Q Consensus       270 ~~~  272 (319)
                      +++
T Consensus       219 ~~~  221 (404)
T PRK14012        219 RRK  221 (404)
T ss_pred             ecC
Confidence            654

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.83  E-value=4.7e-19  Score=164.41  Aligned_cols=192  Identities=15%  Similarity=0.113  Sum_probs=145.5

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR  141 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~  141 (319)
                      ..++.+.+++.+..    . +|. ..+..++++.+++.+.+.+|.. ..+.+++++++++++..++..+.++||+|++.+
T Consensus        19 ~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~   91 (401)
T PLN02409         19 NIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR   91 (401)
T ss_pred             CCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence            56788888775432    1 222 3356778888888887777754 334678889999999999999999999999999


Q ss_pred             CCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          142 PGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       142 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      +.|...  ...++..|++++.++.+..  ..+|++++++.+++    ++++|++++++||||.+++.+++.++++ |+++
T Consensus        92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~  168 (401)
T PLN02409         92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH  168 (401)
T ss_pred             CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc
Confidence            888654  5677888999999987543  34799999999875    6899999999999999998666666666 9999


Q ss_pred             CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |+++++|++++.    +..+..+..+   +..+++.|.+|++++|. ++||+++++
T Consensus       169 g~~~vvD~v~s~----g~~~id~~~~---~~D~~~~s~~K~l~~P~-G~G~l~~~~  216 (401)
T PLN02409        169 PALLLVDGVSSI----GALDFRMDEW---GVDVALTGSQKALSLPT-GLGIVCASP  216 (401)
T ss_pred             CcEEEEEccccc----CCcccccccc---CccEEEEcCccccCcCC-CcceeEECH
Confidence            999999999874    2222222222   22377778899986654 699998753

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.83  E-value=6.9e-19  Score=163.50  Aligned_cols=201  Identities=15%  Similarity=0.158  Sum_probs=150.7

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC--CC------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY--SS------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .+.|+.+...     +.++.+.+++.+.+........  ..      ....+++|+.+++++      +.++++|++++|
T Consensus         4 ~~yld~aa~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g   72 (402)
T TIGR02006         4 PIYLDYAATT-----PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSG   72 (402)
T ss_pred             cEEeeCCcCC-----CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence            3778888754     6788899999887643211111  10      123556777788777      457789999999


Q ss_pred             HHHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          119 CTQAIEVILTVLA----RPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       119 ~t~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      ++++++.++.++.    ++|++|+++.+.|..+...+   +..|.+++.++.+  .++.+|++.+++.++++++++++++
T Consensus        73 ~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~  150 (402)
T TIGR02006        73 ATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMH  150 (402)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEEC
Confidence            9999999887763    68999999999998765443   4569999988875  3456899999999988889999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ++||||.+.+   +++|.++|+++|+++++|++++.    +..+..+...   .-.+++.|.+|.++.+|  +|++++.+
T Consensus       151 ~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~----g~~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~~~~  218 (402)
T TIGR02006       151 VNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSV----GKIPINVNEL---KVDLMSISGHKIYGPKG--IGALYVRR  218 (402)
T ss_pred             CCcCceeccc---HHHHHHHHHHcCCEEEEEcchhc----CCcccCcccc---CCCEEEEehhhhcCCCc--eEEEEEcc
Confidence            9999999965   88999999999999999999975    2222223222   22488889999876446  88887764


Q ss_pred             C
Q 020968          272 P  272 (319)
Q Consensus       272 ~  272 (319)
                      +
T Consensus       219 ~  219 (402)
T TIGR02006       219 K  219 (402)
T ss_pred             C
Confidence            3

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK05939 hypothetical protein; Provisional

Probab=99.83  E-value=6.4e-19  Score=162.55  Aligned_cols=157  Identities=20%  Similarity=0.170  Sum_probs=127.7

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccC
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLP  165 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~  165 (319)
                      ...|++.++++.        ..+..+++++++.|+..++.+++++||+|+++.+.|..+.   ..+...|+++..++.  
T Consensus        49 ~~~lE~~la~le--------g~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~--  118 (397)
T PRK05939         49 TAALEAKITKME--------GGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA--  118 (397)
T ss_pred             HHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence            348888899887        2344566666799999999999999999999999997643   345678999888875  


Q ss_pred             CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       166 ~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                           .|++++++++++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|....    .   +. ....+
T Consensus       119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~---~~-~~~~g  182 (397)
T PRK05939        119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----L---FR-PKDVG  182 (397)
T ss_pred             -----CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----c---cC-ccccC
Confidence                 38899999999899999999999999999   679999999999999999999986421    0   11 11113


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeC
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ..+++.|+||.++.+|.++|++++.+
T Consensus       183 aDivv~S~sK~~~g~g~~igg~v~~~  208 (397)
T PRK05939        183 ASLVINSLSKYIAGHGNALGGAVTDT  208 (397)
T ss_pred             CEEEEecCeecccCCCCeEEEEEecC
Confidence            46999999999999999999998743

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.83  E-value=5.3e-19  Score=164.86  Aligned_cols=246  Identities=20%  Similarity=0.162  Sum_probs=160.7

Q ss_pred             CCCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..+|+|..|.....  +. .+|.+.+++.+++...  ..|+...+..++...+++.+.+..+  ...+++++++|+++
T Consensus        34 dG~~~id~~~~~~~~~--lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgse  107 (413)
T cd00610          34 DGNRYLDFLSGIGVLN--LGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTE  107 (413)
T ss_pred             CCCEEEEcCccHHhhc--cCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence            4678999998743211  23 6789999999988653  2444332344555556666555444  25789999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCC-------------CeEEEEeccCC----CCCcCCHHHHHhhhcc
Q 020968          122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHSH-------------LEVRHFDLLPA----KGWEVDLDAVEALADE  182 (319)
Q Consensus       122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~~~l~~~l~~  182 (319)
                      |+..+++.+.  .++++|++.++.|+.+.......+             .++..++.+..    ..+..|++.+++.++.
T Consensus       108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  187 (413)
T cd00610         108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE  187 (413)
T ss_pred             HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence            9999998774  568999999999988544333221             12344444311    1244588999988875


Q ss_pred             --CceEEEEcCC-CCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968          183 --NTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       183 --~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                        +...++++.| ++++|.++ +.+.+++|.++|+++|+++|+||+|.++...+.. .....+.....   +.|+||.++
T Consensus       188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~-~~~~~~~~~~d---~~t~sK~l~  263 (413)
T cd00610         188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM-FAFEHFGVEPD---IVTLGKGLG  263 (413)
T ss_pred             CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hhHhhcCCCCC---eEEEccccc
Confidence              2334444555 67779876 6677999999999999999999999986443322 11111221112   348899987


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHH--HHhhh-hcCCcchHHHHHHHHHH
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSI--KSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      . |+|+||++++.        ++++.+  ..... .+.+.+++.|.++..++
T Consensus       264 ~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l  306 (413)
T cd00610         264 G-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVL  306 (413)
T ss_pred             C-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence            6 79999998743        466665  22222 23456777777665543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.82  E-value=6.9e-19  Score=161.07  Aligned_cols=188  Identities=20%  Similarity=0.294  Sum_probs=137.4

Q ss_pred             CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCC
Q 020968           80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH  155 (319)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g  155 (319)
                      +.+|+ ++...+|+++++++.        . ++.++++++++|+..++.+++++||+|+++.|.|..+...+    +..|
T Consensus        45 y~ry~-~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G  114 (366)
T PRK07582         45 YGRAS-NPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG  114 (366)
T ss_pred             eECCC-CccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence            33454 557899999999987        2 35666677778999999999999999999999998876544    4578


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF  235 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~  235 (319)
                      ++++.++..+.      .+    .+.+++++|++++|+||+|.+.   ++++|+++|+++|+++++|++|....  +.. 
T Consensus       115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~--~~~-  178 (366)
T PRK07582        115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPL--GQR-  178 (366)
T ss_pred             EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCcc--ccC-
Confidence            88888876321      11    2235788999999999999885   49999999999999999999996421  222 


Q ss_pred             CCCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                       ++. +..   .++++|+||.++. +|+|+||+++.++       ++.++++..+.. ...++++..+.+..
T Consensus       179 -p~~-~g~---Divv~S~sK~l~G~~g~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~a~l~~r  238 (366)
T PRK07582        179 -PLE-LGA---DLVVASDTKALTGHSDLLLGYVAGRDP-------ELMAAVERWRLLAGAIPGPFEAWLAHR  238 (366)
T ss_pred             -chh-cCC---cEEEecccccccCCCCeeEEEEEcCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence             221 222   3888999999855 6899999997542       477777766553 44556666554444

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.82  E-value=1.8e-18  Score=159.20  Aligned_cols=193  Identities=18%  Similarity=0.170  Sum_probs=148.1

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP  142 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p  142 (319)
                      .+.-.+++.+.+.++.. .++  +...+|++.++++++        .+++++++|+++|+.+++.++ +++||+|+++.+
T Consensus        13 ~~~e~~~~~~~l~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~   81 (379)
T PRK11658         13 GDEELAAVKEVLRSGWI-TTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSL   81 (379)
T ss_pred             CHHHHHHHHHHHHcCCc-cCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCC
Confidence            35567778777766543 233  357899999999993        346888999999999999999 799999999999


Q ss_pred             CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      +|..+...+...|++++.+++++ +++.+|++.+++++++++++|+   |+|++|...+   +++|.++|+++|+++|+|
T Consensus        82 ~~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D  154 (379)
T PRK11658         82 TWVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED  154 (379)
T ss_pred             cHHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence            99999888899999999999864 4567999999999988888876   5557898854   889999999999999999


Q ss_pred             CCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          223 EVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       223 ~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      ++++. ..+.+..   +.   ...  +.+.||++...+++.+.|+++..++       ++.++++..+
T Consensus       155 ~a~a~g~~~~~~~---~g---~~g--~~~~Sf~~~K~l~~g~GG~v~~~~~-------~~~~~~~~~~  207 (379)
T PRK11658        155 AAHAVGTYYKGRH---IG---ARG--TAIFSFHAIKNITCAEGGLVVTDDD-------ELADRLRSLK  207 (379)
T ss_pred             CCCccCCeECCee---cC---CCC--CEEEeCCCCCcCcccCceEEEECCH-------HHHHHHHHHH
Confidence            99985 3333321   11   112  2456666655567778898887553       4777776544

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.82  E-value=1.1e-18  Score=161.38  Aligned_cols=153  Identities=17%  Similarity=0.165  Sum_probs=125.0

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  162 (319)
                      +....|++.++++.        ..+..+++++++.|+.+++.+++++||+|+++.+.|.+....    +...|+++.+++
T Consensus        61 Ptv~~lE~~la~le--------g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd  132 (432)
T PRK06702         61 PTLAAFEQKLAELE--------GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN  132 (432)
T ss_pred             cHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC
Confidence            35678999999988        345688999999999999999999999999999999765554    678899988886


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .      .+|++.+++++++++++|++.+|+||++.+.+   +++|+++|+++|+++|+|++|..        +.+...-
T Consensus       133 ~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t--------P~~~~pl  195 (432)
T PRK06702        133 P------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT--------PYLCQAF  195 (432)
T ss_pred             C------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc--------hhhCChh
Confidence            4      36899999999999999999999999999966   99999999999999999999853        1111111


Q ss_pred             CCCCeEEEecCcc-----ccCCCccee
Q 020968          243 SIVPVLTLGSISK-----RWIVPGWRL  264 (319)
Q Consensus       243 ~~~~vi~~~s~sK-----~~~~~G~r~  264 (319)
                      ...-.|++.|+||     ...++|.++
T Consensus       196 ~~GADIvv~S~TKy~~Ghsd~l~G~v~  222 (432)
T PRK06702        196 EHGANIIVHSTTKYIDGHASSLGGIVI  222 (432)
T ss_pred             hcCCCEEEEccccccCCCcceeceEEE
Confidence            1223499999999     666666666

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.82  E-value=2.1e-18  Score=159.31  Aligned_cols=193  Identities=16%  Similarity=0.111  Sum_probs=144.0

Q ss_pred             CCcHHHHHHHHHHhhcCCC-----CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-----
Q 020968           62 RTASVAVDAIVHSVRSARF-----NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-----  131 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~-----~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-----  131 (319)
                      ++++.+.+++.+.+.....     +.|+ ..+...++++++++... .|. .++++|++|+|++++++.+++++.     
T Consensus        10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~   86 (382)
T TIGR03403        10 MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEIL   86 (382)
T ss_pred             CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcc
Confidence            5678899999887754221     1233 23557888888888753 232 257899999999999999998762     


Q ss_pred             CC-CCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHH
Q 020968          132 RP-GANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQK  207 (319)
Q Consensus       132 ~~-gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~  207 (319)
                      ++ +++|+++...|+.+..   .++..|.+++.++.++  ++.+|++.+++.++++++++++++|+||||.+++   +++
T Consensus        87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~  161 (382)
T TIGR03403        87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKE  161 (382)
T ss_pred             cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHH
Confidence            45 4789999877766543   3457899999998753  3578999999999888899999999999999987   678


Q ss_pred             HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |.++|+++|+++++|+++..    +..+..+....   -.+++.|++|+++.+|  +|++.+.+
T Consensus       162 I~~la~~~g~~~ivD~a~~~----g~~~~~~~~~~---~D~~~~s~~K~~gp~G--~g~l~vr~  216 (382)
T TIGR03403       162 IGEICKERGVLFHTDAVQAI----GKIPVDVQKAG---VDFLSFSAHKFHGPKG--VGGLYIRK  216 (382)
T ss_pred             HHHHHHHcCCEEEEechhhc----CCCccCccccC---CCEEEEcchhhCCCCc--eEEEEECC
Confidence            88999999999999999774    22222222222   2388899999987778  57776643

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.82  E-value=4.7e-18  Score=158.15  Aligned_cols=232  Identities=17%  Similarity=0.129  Sum_probs=156.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..+++|+.++.   ..+...|.+++++.++++.....      .+.......+|++.+++++        ..+..++++
T Consensus        44 ~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~~  112 (406)
T PRK13393         44 PREVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH--------GKEAALLFT  112 (406)
T ss_pred             CccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh--------CCCcEEEeC
Confidence            357889998873   44667899999999988753221      1111223467777777776        224555555


Q ss_pred             CHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcC
Q 020968          118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN  191 (319)
Q Consensus       118 G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~  191 (319)
                      ++++++..++..+..  +|+.|++....|......+...|.++..++.       .|++.+++.++    +++++|++++
T Consensus       113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~  185 (406)
T PRK13393        113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES  185 (406)
T ss_pred             CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence            566788888887655  6787777778887777777778877666553       36777776654    2567888999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ++|++|.+.+   +++|.++|+++++++|+||+|....++............ ....|+++||||.|+++|   ||++++
T Consensus       186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~  259 (406)
T PRK13393        186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS  259 (406)
T ss_pred             CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence            9999999966   889999999999999999999844433221111111111 123588899999999888   998864


Q ss_pred             CCCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968          271 DPNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK  307 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l  307 (319)
                      .        ++++.++.....   +...++..+.++..++
T Consensus       260 ~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL  291 (406)
T PRK13393        260 A--------ALCDFIRSFASGFIFTTSLPPAVAAGALASV  291 (406)
T ss_pred             H--------HHHHHHHHhCcCceecCccCHHHHHHHHHHH
Confidence            3        467777655432   2334555555544433

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.82  E-value=1.2e-18  Score=162.29  Aligned_cols=159  Identities=19%  Similarity=0.182  Sum_probs=130.9

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  162 (319)
                      +....|++.++++.        ..+..++++|+++|+..++.+++++||+|+++.+.|...    ...++..|++++.++
T Consensus        64 p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd  135 (431)
T PRK08248         64 PTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVD  135 (431)
T ss_pred             chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEEC
Confidence            34678888888887        346889999999999999999999999999999988653    345667899998887


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       .|++.+++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|..    +....++    
T Consensus       136 ~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl----  197 (431)
T PRK08248        136 P-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI----  197 (431)
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh----
Confidence            5       3889999999888999999999999999976   78999999999999999999863    1111122    


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ..+..+++.|++|.++.+|.++|++++.+
T Consensus       198 ~~gaDivv~S~tK~lgg~g~~~Gg~v~~~  226 (431)
T PRK08248        198 EHGADIVVHSATKFIGGHGTSIGGVIVDS  226 (431)
T ss_pred             HcCCCEEEEcCccccCCCCCceEEEEEeC
Confidence            12345999999999999999999988754

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.82  E-value=2e-18  Score=159.17  Aligned_cols=188  Identities=18%  Similarity=0.196  Sum_probs=140.5

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCC---------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSST---------VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-  131 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-  131 (319)
                      ++++.+.+++.+.+....  .++..         ...+++|+.+++++      +.++++|++|+|++++++.++.++. 
T Consensus        10 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~~   81 (379)
T TIGR03402        10 RVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSALA   81 (379)
T ss_pred             CCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence            677899999988775421  22211         12346666777766      3467899999999999999998764 


Q ss_pred             --CCCCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHH
Q 020968          132 --RPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ  206 (319)
Q Consensus       132 --~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~  206 (319)
                        .+|++|++....|+.+..   .++..|.+++.++.+.  ++.+|++++++.++++++++++++++||||.+++   ++
T Consensus        82 ~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~  156 (379)
T TIGR03402        82 AQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IE  156 (379)
T ss_pred             hcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HH
Confidence              457899999988876543   3345699999888753  3568999999999888999999999999999987   67


Q ss_pred             HHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       207 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +|.++|+++|+++++|++++.    +..+..+....   -.+++.|.+|.++.+|  +|++.+..
T Consensus       157 ~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~---~D~~~~s~~K~~gp~G--~g~l~v~~  212 (379)
T TIGR03402       157 EIGEIAKERGALFHTDAVQAV----GKIPIDLKEMN---IDMLSLSGHKLHGPKG--VGALYIRK  212 (379)
T ss_pred             HHHHHHHHcCCEEEEECcccc----cccccCcccCC---CCEEEEcHHHcCCCCc--eEEEEECC
Confidence            899999999999999999975    33333333322   2388889999766566  77776654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.82  E-value=2.4e-18  Score=157.21  Aligned_cols=191  Identities=18%  Similarity=0.165  Sum_probs=141.8

Q ss_pred             CCcHHHHHHHHHHhhcCCC--CCCCCC------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC-
Q 020968           62 RTASVAVDAIVHSVRSARF--NCYSST------VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-  132 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~--~~Y~~~------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~-  132 (319)
                      ++++.+.+++.+.+.....  ..+...      .-++++|+.+++++      +.++++|++++|++++++.++.++.. 
T Consensus         9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~   82 (353)
T TIGR03235         9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA   82 (353)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence            6788999999887743211  111111      11457788888877      45678999999999999999988753 


Q ss_pred             ---CC-CEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968          133 ---PG-ANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       133 ---~g-d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l  205 (319)
                         +| +.|++....|+.+.   ..++..|++++.++.+.  ++.+|++++++.++++++++++++++||||.+++   +
T Consensus        83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~  157 (353)
T TIGR03235        83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I  157 (353)
T ss_pred             cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence               55 77888877776543   33456799999888753  4578999999999888899999999999999976   7


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ++|.++|+++|+++++|++++...    .+..+...   .-.+++.|.+|+++.+|  +|++++.++
T Consensus       158 ~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~g--~g~l~~~~~  215 (353)
T TIGR03235       158 REIAEVLEAHEAFFHVDAAQVVGK----ITVDLSAD---RIDLISCSGHKIYGPKG--IGALVIRKR  215 (353)
T ss_pred             HHHHHHHHHcCCEEEEEchhhcCC----cccccccc---CCCEEEeehhhcCCCCc--eEEEEEccC
Confidence            999999999999999999987522    22222222   22378889999876556  899887653

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.81  E-value=2e-19  Score=163.73  Aligned_cols=199  Identities=15%  Similarity=0.118  Sum_probs=152.5

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----------
Q 020968           63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----------  132 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~----------  132 (319)
                      ++..+.+.+........ ..|+...+..++++++++++.+.+|.+.+..++++|+|+|+++..++.++..          
T Consensus        11 ~~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~   89 (345)
T cd06450          11 PPALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG   89 (345)
T ss_pred             HHHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccc
Confidence            44566666666555443 3588888999999999999998888664566899999999999999988742          


Q ss_pred             --C--CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCH
Q 020968          133 --P--GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       133 --~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~  202 (319)
                        +  ++.|+++.+.|..+...+...|.+++.++.++.  +.+|++++++.+.+      +++++++++|+||||.+   
T Consensus        90 ~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---  164 (345)
T cd06450          90 GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---  164 (345)
T ss_pred             ccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---
Confidence              2  347888999999998888888999999988643  47999999999876      67888899999999998   


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      .++++|+++|+++|+++++|++|+.+.......... ......-..+..|++|++ .++.++|++++
T Consensus       165 ~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l-~~p~g~g~~~~  229 (345)
T cd06450         165 DPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYG-LVPLGCSAVLV  229 (345)
T ss_pred             CCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHhh-CCCcchHHHHH
Confidence            558999999999999999999999866422111110 001011235677999974 56678888765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.81  E-value=5.8e-18  Score=155.19  Aligned_cols=157  Identities=15%  Similarity=0.214  Sum_probs=126.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~  163 (319)
                      ....|++.++++.        ..+++++++|+++|+..++.+++++||+|++++|.|.+....    +...|+++..++.
T Consensus        51 t~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~  122 (377)
T TIGR01324        51 THFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP  122 (377)
T ss_pred             cHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence            3469999999988        356899999999999999999999999999999999876543    3567887776643


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      .       +.+.+++++++++++|++.+|+||+|.+   .++++|+++|+++|+++|+|++|+.-...    .++    .
T Consensus       123 ~-------~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~----~pl----~  184 (377)
T TIGR01324       123 L-------IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLF----KPL----E  184 (377)
T ss_pred             C-------CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----Ccc----c
Confidence            1       2378898898899999999999999988   77999999999999999999999863321    111    1


Q ss_pred             CCCeEEEecCccccCCC-cceeeEEEee
Q 020968          244 IVPVLTLGSISKRWIVP-GWRLGWLVTS  270 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~-G~r~G~i~~~  270 (319)
                      .+..+++.|++|.++.+ +...|++++.
T Consensus       185 ~gaDivv~S~tK~l~G~~d~~gG~v~~~  212 (377)
T TIGR01324       185 HGVDISIQAGTKYLVGHSDIMIGTVVAN  212 (377)
T ss_pred             cCceEEEecCceeccCCCCceEEEEEeC
Confidence            23349999999998765 4678877763

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.81  E-value=1.7e-18  Score=146.98  Aligned_cols=278  Identities=18%  Similarity=0.161  Sum_probs=192.9

Q ss_pred             HhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCC-cHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHH
Q 020968           21 KTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        21 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia   97 (319)
                      ...++.++..+...+.    +..++.-+||+.|.......-|. .|.+.+ ....+..+  ..+.|-|-.|++.++.+.+
T Consensus        10 ~~a~p~~vf~~~~~y~----~d~~p~KvnL~igAYRtd~g~PWvLPvVk~-~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~   84 (410)
T KOG1412|consen   10 PVAPPIEVFKLNASYG----EDLDPVKVNLGIGAYRTDDGKPWVLPVVKK-AEKKIANDQSLNHEYLPILGLPTFTKAAT   84 (410)
T ss_pred             ccCChHHHHhhHHHhc----ccCCcceeecccceEEcCCCCeeEehhhhh-hhhhccCchhccchhccccCchhhhhhhH
Confidence            3344445555554443    44477889999996432222222 233333 33223332  2357989999999999999


Q ss_pred             HHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCC-CeEEEEeccCCCCCcCC
Q 020968           98 DYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSH-LEVRHFDLLPAKGWEVD  172 (319)
Q Consensus        98 ~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~d  172 (319)
                      +.+-......+..+++  +=+-++|.|+...+..+..  ...+|.+.+|+|.++..++...| ..+..++.++.++-.+|
T Consensus        85 el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d  164 (410)
T KOG1412|consen   85 ELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVD  164 (410)
T ss_pred             HHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceec
Confidence            9986544445556665  4456788888888776632  35679999999999999999999 45667777777777899


Q ss_pred             HHHHHhhhccCc--eEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC--CCccc-CCCCC
Q 020968          173 LDAVEALADENT--VALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV--PMGVF-GSIVP  246 (319)
Q Consensus       173 ~~~l~~~l~~~~--~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~-~~~~~  246 (319)
                      .+.+...++..+  ..+++..+ +||||.-.+.++|..|++..++++.+.+.|-+|++|..++....  .+..+ .....
T Consensus       165 ~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e  244 (410)
T KOG1412|consen  165 LEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE  244 (410)
T ss_pred             HHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe
Confidence            999888776533  44555555 99999999999999999999999999999999999987653321  12222 22345


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-----hhcCCcchHHHHHHHHHHhc
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-----NISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~q~~~~~~l~~  309 (319)
                      ++++.||+|.||+.+.|+|-+...-++     +..+..++...     ..++.|+......+++ +++
T Consensus       245 ~fv~QSFaKNfGlYneRvGnltvv~~n-----~a~i~~v~SQl~lviR~~~SNPPAyGArIV~k-vL~  306 (410)
T KOG1412|consen  245 LFVCQSFAKNFGLYNERVGNLTVVVNN-----PAVIAGVKSQLTLVIRSNWSNPPAYGARIVHK-VLS  306 (410)
T ss_pred             EEEEhhhhhhcccccccccceEEEecC-----hhHHHHHHHHHHHHHhhccCCCcchhhHHHHH-Hhc
Confidence            899999999999999999987443222     23444444332     2356777777788888 444

>PLN02651 cysteine desulfurase

Probab=99.81  E-value=6.3e-18  Score=155.08  Aligned_cols=198  Identities=16%  Similarity=0.149  Sum_probs=144.9

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC------CC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY------SS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .|+.+.+.     ++++.+.+++.+.+.....+..      ..  ..-.+++|+.+++++      +.+++++++|+|++
T Consensus         2 Yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t   70 (364)
T PLN02651          2 YLDMQATT-----PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGAT   70 (364)
T ss_pred             cccCcCCC-----CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHH
Confidence            45666654     6788999999887653211111      01  111456667777766      34678999999999


Q ss_pred             HHHHHHHHHh----cCCCCEEEEcCCCCcchHHH---HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968          121 QAIEVILTVL----ARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG  193 (319)
Q Consensus       121 ~ai~~~~~~l----~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  193 (319)
                      ++++.++.++    .++||+|++....|+.+...   +...|.+++.++.+  .++.+|++.++++++++++++++++++
T Consensus        71 ~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~  148 (364)
T PLN02651         71 ESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVN  148 (364)
T ss_pred             HHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCC
Confidence            9988887664    46899999999888765433   33568888888875  345789999999999889999999999


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |+||.+.+   +++|.++|+++|+++++|.+++.    +..+..+..++-   .+++.|.+|++ .| ..+|++++.+
T Consensus       149 n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~~~~~---D~~~~s~hK~~-gp-~G~g~l~v~~  214 (364)
T PLN02651        149 NEIGVIQP---VEEIGELCREKKVLFHTDAAQAV----GKIPVDVDDLGV---DLMSISGHKIY-GP-KGVGALYVRR  214 (364)
T ss_pred             CCceeccc---HHHHHHHHHHcCCEEEEEcchhh----CCcccCcccCCC---CEEEechhhhC-CC-CceEEEEEcC
Confidence            99999966   88999999999999999999986    322333333332   48999999974 33 3488887765

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.81  E-value=2.8e-18  Score=139.61  Aligned_cols=166  Identities=19%  Similarity=0.121  Sum_probs=130.9

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH-HHHhhCCCeEEEEeccCCC
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-ARATHSHLEVRHFDLLPAK  167 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~  167 (319)
                      +.++++.++++++      .+.+++++++|+++|+..+++++.+++++|+++.+.|.+.. ..++..|.++..++.+...
T Consensus         2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~   75 (170)
T cd01494           2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG   75 (170)
T ss_pred             HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence            3678899998883      46789999999999999999999888999999999998887 7889999999998876543


Q ss_pred             CCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          168 GWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       168 ~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                      ....+.+.+++.. .++++++++++++|++|...+   +++|.++|+++|+++|+|++|..+......    ........
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~  148 (170)
T cd01494          76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG----VLIPEGGA  148 (170)
T ss_pred             ccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc----cccccccC
Confidence            3333333554433 457889999999999999876   488889999999999999999987754321    11112234


Q ss_pred             eEEEecCccccCCCcceeeEEEe
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      .+++.|++|.++.  .++|++++
T Consensus       149 d~~~~s~~K~~~~--~~~G~l~~  169 (170)
T cd01494         149 DVVTFSLHKNLGG--EGGGVVIV  169 (170)
T ss_pred             CEEEEEcccccCC--CceEEEEe
Confidence            5888999999766  67999875

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.81  E-value=4.8e-18  Score=156.10  Aligned_cols=175  Identities=21%  Similarity=0.224  Sum_probs=132.4

Q ss_pred             CCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCC
Q 020968           82 CYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSH  155 (319)
Q Consensus        82 ~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g  155 (319)
                      .|...  +...+|++.+++++        ..++++++++++.+++.++. ++++||+|+++.+.|..+..    .+...|
T Consensus        40 ~Y~r~~~p~~~~le~~la~l~--------g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G  110 (378)
T TIGR01329        40 DYTRSGNPTRTALESLLAKLD--------KADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSG  110 (378)
T ss_pred             ccCCCCChHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcC
Confidence            45543  22456777777766        23567777778889998776 77999999999999987654    345689


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF  235 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~  235 (319)
                      +++..++.       .|++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|....    ..
T Consensus       111 ~~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~----~~  176 (378)
T TIGR01329       111 VVVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL----LC  176 (378)
T ss_pred             cEEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----cC
Confidence            99988875       2889999999888999999999999999965   9999999999999999999986422    11


Q ss_pred             CCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      .++. ..   -.+++.|++|.++.+ |.+.|++++.++       .+.++++..+.
T Consensus       177 ~~l~-~g---~Di~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~  221 (378)
T TIGR01329       177 NPLE-LG---ADIVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQN  221 (378)
T ss_pred             Chhh-cC---CcEEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHH
Confidence            2221 22   239999999998764 578999987542       35566665554

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.80  E-value=8.3e-18  Score=154.76  Aligned_cols=192  Identities=20%  Similarity=0.333  Sum_probs=140.8

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCC
Q 020968           65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG  143 (319)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~  143 (319)
                      +.-.+++.+.+..+..  |+.    .++++++++++.+..    +.+++++++|+++|+.+++.++ +++||+|+++.|+
T Consensus        11 ~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~----g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t   80 (375)
T PRK11706         11 GTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRF----GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT   80 (375)
T ss_pred             HHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHh----CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence            4456677777665432  332    244555555554433    3468999999999999988766 6899999999999


Q ss_pred             CcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968          144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE  223 (319)
Q Consensus       144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~  223 (319)
                      |..+...+...|++++.+++++ +++.+|++++++++++++++|++++   ++|...   ++++|.++|+++|++||+|+
T Consensus        81 ~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~---~~~~i~~la~~~~i~vIeD~  153 (375)
T PRK11706         81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVAC---EMDTIMALAKKHNLFVVEDA  153 (375)
T ss_pred             cHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCcc---CHHHHHHHHHHcCCEEEEEC
Confidence            9999999999999999999864 4578999999999988888888764   689874   58899999999999999999


Q ss_pred             CCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          224 VYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       224 a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      +|+.+. +++.+   +..+.    .+.+.||+  |.+ .+|.+.++++. +       +++.++++..+
T Consensus       154 a~a~g~~~~~~~---~g~~~----~~~~~Sf~~~K~l-~~g~gG~~~~~-~-------~~~~~~~~~~~  206 (375)
T PRK11706        154 AQGVMSTYKGRA---LGTIG----HIGCFSFHETKNY-TAGEGGALLIN-D-------PALIERAEIIR  206 (375)
T ss_pred             ccccccccCCee---eecCc----CEEEEeCCCCccc-cccCCeEEEEC-C-------HHHHHHHHHHH
Confidence            999765 34322   22221    14445554  996 45877777764 2       24777666554

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.80  E-value=5.3e-18  Score=158.35  Aligned_cols=218  Identities=16%  Similarity=0.095  Sum_probs=143.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----CCCCC-CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ..+.++|..++.      ++++.+++++...+....     ...|. .......+.+...+.+.+.+|  .+..+|++++
T Consensus        24 ~~~~~~l~~~~n------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~s   95 (416)
T PRK00011         24 QEEHIELIASEN------FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHS   95 (416)
T ss_pred             HhcCeeeecccC------cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCC
Confidence            467899998872      468899998876542210     01111 111123333322223333334  3445566655


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-----HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEA-----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIIN  191 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~  191 (319)
                       +++|+..++.+++++||+|+++.|+|..+..     .....|++++.++++. +++.+|++++++++++ +++++++++
T Consensus        96 -gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~  173 (416)
T PRK00011         96 -GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGA  173 (416)
T ss_pred             -chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECC
Confidence             4779999999999999999999999975421     1233456777776643 3468999999999864 688888876


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ++++  ..   .++++|.++|+++|+++|+|++|.. +.+.+..+..+.     ...++++|+||++  +|.|.||++++
T Consensus       174 ~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~i~~~  241 (416)
T PRK00011        174 SAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGLILTN  241 (416)
T ss_pred             CcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceEEEeC
Confidence            6554  33   3489999999999999999999753 332222222222     1237899999984  78999999986


Q ss_pred             CCCCCccchHHHHHHHHhhh
Q 020968          271 DPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~  290 (319)
                      ++       ++.++++....
T Consensus       242 ~~-------~~~~~l~~~~~  254 (416)
T PRK00011        242 DE-------ELAKKINSAVF  254 (416)
T ss_pred             CH-------HHHHHHHHHhC
Confidence            53       47777776554

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.80  E-value=8.1e-18  Score=153.61  Aligned_cols=190  Identities=15%  Similarity=0.142  Sum_probs=135.5

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP  140 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~  140 (319)
                      ..+++.+++++...... ....|.  ....++|+.++++++.    .-+...|++++|+++++..++.+++.+||++++.
T Consensus         8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~~----~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~   80 (355)
T TIGR03301         8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAGG----DDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVL   80 (355)
T ss_pred             CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhcC----CCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEE
Confidence            36678888888763221 111232  2356777777777732    2222368889999999999999998888887765


Q ss_pred             CCC-Ccc-hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968          141 RPG-FPY-YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG  216 (319)
Q Consensus       141 ~p~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~  216 (319)
                      .+. |.. +...++..|.+++.++.+.  ++.+|++++++.+++  +.+.+++++++||||.+.+   +++|+++|++++
T Consensus        81 ~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~  155 (355)
T TIGR03301        81 INGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHG  155 (355)
T ss_pred             CCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcC
Confidence            554 443 4567788999999888743  457899999998864  4467788899999999955   899999999999


Q ss_pred             CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEeeC
Q 020968          217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSD  271 (319)
Q Consensus       217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~  271 (319)
                      +++|+|++++..   . .+.++..+   +..++++|++|++ +.+|  +||+++++
T Consensus       156 ~~livD~~~s~g---~-~~~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~  202 (355)
T TIGR03301       156 AVLIVDAMSSFG---A-IPIDIEEL---DVDALIASANKCLEGVPG--FGFVIARR  202 (355)
T ss_pred             CEEEEEeccccC---C-cccchhhc---CccEEEecCCcccccCCc--eeEEEECH
Confidence            999999876542   1 12222222   3458899999985 4456  69999854

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.80  E-value=7.5e-18  Score=155.31  Aligned_cols=244  Identities=16%  Similarity=0.143  Sum_probs=166.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..+..+ .+|.+.+++.++++...  ..+ .....+++..+++++.+..+    .+.+++++++++|
T Consensus        27 ~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a   98 (377)
T PRK02936         27 NGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEA   98 (377)
T ss_pred             CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHH
Confidence            4678899988874333334 67889999999887532  122 23457889999999976432    3589999999999


Q ss_pred             HHHHHHHhc-CCC-CEEEEcCCCCcchH-HHHhhCCCeEE---EEeccCCCCC--cCCHHHHHhhhccCceEEEEcCCCC
Q 020968          123 IEVILTVLA-RPG-ANILLPRPGFPYYE-ARATHSHLEVR---HFDLLPAKGW--EVDLDAVEALADENTVALVIINPGN  194 (319)
Q Consensus       123 i~~~~~~l~-~~g-d~Vl~~~p~~~~~~-~~~~~~g~~~~---~~~~~~~~~~--~~d~~~l~~~l~~~~~~v~l~~p~n  194 (319)
                      +..+++... .+| ++|++.++.|++.. ......+....   ..+..+.-.+  ..|++.+++.+.++++++++..+++
T Consensus        99 ~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~  178 (377)
T PRK02936         99 NEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQG  178 (377)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccC
Confidence            999998542 234 67999998887533 22222222110   0111100000  1278999998887888888888889


Q ss_pred             ccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCC
Q 020968          195 PCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN  273 (319)
Q Consensus       195 ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~  273 (319)
                      ++|.. .+.+.+++|.++|+++|+++|+||+|.++.+.+... ....+.....+   .++||.++ +|+|+||++++.  
T Consensus       179 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~--  251 (377)
T PRK02936        179 EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK--  251 (377)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH--
Confidence            98876 578999999999999999999999999877665422 22222222222   37999987 899999999853  


Q ss_pred             CCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          274 GILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       274 ~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                            ++++.+..... .+.+.+++.|.++..++
T Consensus       252 ------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l  280 (377)
T PRK02936        252 ------ELGTAFGPGSHGSTFGGNPLAMAAAKEVL  280 (377)
T ss_pred             ------HHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence                  46666654322 23467889998887765

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.80  E-value=4.1e-18  Score=157.36  Aligned_cols=231  Identities=15%  Similarity=0.160  Sum_probs=152.1

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +||+..|   |..+...|.+++++.+++++..      -..|+...++.+|++.+|+++..       .+.+++++|.++
T Consensus         1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~a   70 (392)
T PLN03227          1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAST   70 (392)
T ss_pred             CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHHH
Confidence            3566666   3456778899999998886511      12377666789999999999932       355666666555


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-----------cCceEEEEc
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-----------ENTVALVII  190 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~~~~~v~l~  190 (319)
                      .. .++.+++++||.|+++++.|.++...+...+.++..++..+.    -+++.+.+.+.           +++++|++.
T Consensus        71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E  145 (392)
T PLN03227         71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVE  145 (392)
T ss_pred             HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence            55 677778999999999999999988777777777776664311    13333333332           246788888


Q ss_pred             CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc--cC-CCCCeEEEecCccccCCCcceeeEE
Q 020968          191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV--FG-SIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~-~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      .+.||+|.+.+   ++++.++|+++|+++|+||+|..-..+.........  +. ..+..|++.|+||.++   .+.|++
T Consensus       146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v  219 (392)
T PLN03227        146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMT  219 (392)
T ss_pred             CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEE
Confidence            99999999977   889999999999999999999832222111111111  11 1233688999999975   444888


Q ss_pred             EeeCCCCCccchHHHHHHHHhh-h-hcC-CcchHHHHHHHHHH
Q 020968          268 VTSDPNGILQDSGIVDSIKSFL-N-ISS-DPATFIQFLKSSRK  307 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~q~~~~~~l  307 (319)
                      +++.        ++++.++... . .++ ..+++.+.+...++
T Consensus       220 ~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al  254 (392)
T PLN03227        220 VGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATAT  254 (392)
T ss_pred             ecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHHH
Confidence            7643        4565554332 2 222 22455555544333

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.80  E-value=6.3e-18  Score=155.28  Aligned_cols=190  Identities=18%  Similarity=0.171  Sum_probs=137.7

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP  140 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~  140 (319)
                      .++.+.+.+++.+.... ....|.  ....++|+.++++++.    .-+.+.+++++|+++++..++.++..+||.|+++
T Consensus        14 ~~~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~l~~l~~~----~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~   86 (368)
T PRK13479         14 LTTSRTVREAMLRDWGS-WDDDFN--ALTASVRAKLVAIATG----EEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP   86 (368)
T ss_pred             CCCCHHHHHHhCCCCCC-CChHHH--HHHHHHHHHHHHHhCC----CCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            35677887777654311 111122  2456777777777632    2123568899999999999999999999999998


Q ss_pred             CCCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968          141 RPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG  216 (319)
Q Consensus       141 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~  216 (319)
                      .+.|.+.  ...++..|+++..++...  ++.+|++++++.+++  +.+++++++|+||||...+   +++|.++|++++
T Consensus        87 ~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~  161 (368)
T PRK13479         87 DNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHG  161 (368)
T ss_pred             eCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcC
Confidence            8887654  477788999999998753  356899999998864  4567889999999999977   788899999999


Q ss_pred             CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEeeC
Q 020968          217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSD  271 (319)
Q Consensus       217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~  271 (319)
                      +++|+|+++..   +. .+..+....   ..+++.|++|++ +.+|  +||++++.
T Consensus       162 ~~livDa~~~~---g~-~~~~~~~~~---~d~~v~s~~K~l~g~~G--~G~l~~~~  208 (368)
T PRK13479        162 KRLIVDAMSSF---GA-IPIDIAELG---IDALISSANKCIEGVPG--FGFVIARR  208 (368)
T ss_pred             CEEEEEccccc---CC-ccccccccC---ceEEEecCccccccCCC--ceEEEECH
Confidence            99999966532   22 223333332   237778999975 5577  69999854

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.80  E-value=4.3e-18  Score=158.33  Aligned_cols=159  Identities=23%  Similarity=0.227  Sum_probs=126.5

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh----CCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH----SHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~  162 (319)
                      +...+|++.++++..        .+..++++++++|+..++.+++++||+|+++.+.|......+..    .|+++..++
T Consensus        58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d  129 (425)
T PRK06084         58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA  129 (425)
T ss_pred             chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence            455788888988872        34677888889999999999999999999999999864444332    455555554


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       .|++.+++++++++++|++++|+||+|.+++   +++|.++|+++|+++|+|++|+.....    .++ .. 
T Consensus       130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~----~p~-~~-  193 (425)
T PRK06084        130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC----RPF-EH-  193 (425)
T ss_pred             C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Chh-hc-
Confidence            2       3899999999888999999999999999976   899999999999999999999853221    111 11 


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                        ...+++.|++|.++.+|.++|.+++.+
T Consensus       194 --gaDivv~S~tK~l~G~g~~~gG~v~~~  220 (425)
T PRK06084        194 --GADIVVHSLTKYIGGHGTSIGGIVVDS  220 (425)
T ss_pred             --CCCEEEECchhcccccccceeEEEEeC
Confidence              234999999999999999999988753

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.79  E-value=1.4e-17  Score=153.09  Aligned_cols=197  Identities=20%  Similarity=0.208  Sum_probs=141.3

Q ss_pred             CCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----CCC
Q 020968           62 RTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----PGA  135 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~----~gd  135 (319)
                      ++.|.+.+++.+++....  ...|   .+..++.+.+.+.+.+..|  .+..++++++|+++++..++.++.+    +|+
T Consensus        31 ~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~  105 (371)
T PRK13520         31 EPHPIARKAHEMFLETNLGDPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKP  105 (371)
T ss_pred             CchHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCc
Confidence            456788888888776421  1112   2333333344444444333  3456789999999999998877654    578


Q ss_pred             EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          136 NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       136 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      +|++..+.|..+...++..|.++..++.+  .++.+|+++++++++++++.|++++++|+||.+.+   +++|.++|+++
T Consensus       106 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~  180 (371)
T PRK13520        106 NIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALEN  180 (371)
T ss_pred             eEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHc
Confidence            99999999999988889999999988874  34578999999999888888888889999999966   88999999999


Q ss_pred             CCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          216 GIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |+++++|++|..+...  ... ..+ .+....-..+..|.+|+ +.+|.++|++++.+
T Consensus       181 g~~livD~a~~~~~~~~~~~~-~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~  235 (371)
T PRK13520        181 GIFLHVDAAFGGFVIPFLDDP-PNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRD  235 (371)
T ss_pred             CCCEEEEecchhHHHHhhcCC-CCc-cccCCCCceEEECCccc-cCccCCceEEEEcC
Confidence            9999999999875421  111 011 11111112455678896 77888999988754

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.79  E-value=1e-17  Score=155.63  Aligned_cols=236  Identities=17%  Similarity=0.154  Sum_probs=152.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ++..++||..|.-..+..+ -.|.+.+++.+++....  .++..... +....+++.+.+..    ..+.+++++++++|
T Consensus        38 dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~~~~-~~~~~l~~~l~~~~----~~~~~~~~~sGseA  109 (403)
T PRK05093         38 QGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW--HISNVFTN-EPALRLAKKLIDAT----FAERVFFANSGAEA  109 (403)
T ss_pred             CCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcC--cccCccCC-HHHHHHHHHHHhhC----CCCEEEEeCchHHH
Confidence            3667889977732222223 67889999998876522  11111111 22334444444322    24689999999999


Q ss_pred             HHHHHHHhc--------CCCCEEEEcCCCCcchHHHH-hhCCC------------eEEEEeccCCCCCcCCHHHHHhhhc
Q 020968          123 IEVILTVLA--------RPGANILLPRPGFPYYEARA-THSHL------------EVRHFDLLPAKGWEVDLDAVEALAD  181 (319)
Q Consensus       123 i~~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l~  181 (319)
                      +..+++...        ....+|+..+-.|++....+ ...+.            ++..++.       .|++.+++.+.
T Consensus       110 ~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~  182 (403)
T PRK05093        110 NEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVID  182 (403)
T ss_pred             HHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhc
Confidence            999988542        12357887787776643222 21111            1111111       27899999887


Q ss_pred             cCceEEEEcCCCCcccccc--CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC
Q 020968          182 ENTVALVIINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV  259 (319)
Q Consensus       182 ~~~~~v~l~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~  259 (319)
                      +++++|++. |.||+|-++  +.+.+++|.++|++||+++|+||+|.++.+++... +...+.....   +.||||+++ 
T Consensus       183 ~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l~-  256 (403)
T PRK05093        183 DHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKALG-  256 (403)
T ss_pred             CCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEeccccc-
Confidence            777777666 877777654  88999999999999999999999999987766432 2212221111   458999987 


Q ss_pred             CcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHHH
Q 020968          260 PGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       260 ~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  307 (319)
                      +|+|+||+++++        ++++.+... .....+.+++.|.++..++
T Consensus       257 ~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L  297 (403)
T PRK05093        257 GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVF  297 (403)
T ss_pred             CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Confidence            899999999864        466666542 2334467888998877744

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.79  E-value=9.1e-18  Score=153.26  Aligned_cols=189  Identities=19%  Similarity=0.170  Sum_probs=134.7

Q ss_pred             CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEE
Q 020968           81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH  160 (319)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~  160 (319)
                      .+|+ .+...+|+++++++.        ..+++++++|+++|+.+++. ++++||+|+++.+.|......+....... .
T Consensus        49 ~R~~-~p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~  117 (364)
T PRK07269         49 TRTK-NPTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R  117 (364)
T ss_pred             eCCC-CccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence            3444 346789999999998        46799999999999999985 56899999999999976544333211100 0


Q ss_pred             EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      +..    .|..|++++++++++++++|++++|+||+|.+.   ++++|+++|+++|+++|+|++|..-.+.    .++..
T Consensus       118 ~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~----~pl~~  186 (364)
T PRK07269        118 FHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPIEL  186 (364)
T ss_pred             EEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC----Cchhh
Confidence            111    123589999999988999999999999999985   5999999999999999999998653221    12221


Q ss_pred             cCCCCCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968          241 FGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL  302 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~  302 (319)
                          .-.+++.|++|.++.+|- -.|++++.++       ++.++++..+.. ....+++..+.
T Consensus       187 ----gaDivv~S~tK~l~g~~d~~gG~v~~~~~-------~l~~~~~~~~~~~G~~~s~~~a~l  239 (364)
T PRK07269        187 ----GADIVLHSATKYLSGHNDVLAGVVVTNDL-------ELYEKLFYNLNTTGAVLSPFDSYL  239 (364)
T ss_pred             ----CCcEEEecCceeccCCCcccceEEEeCcH-------HHHHHHHHHHHHhCCCCCHHHHHH
Confidence                223999999999877554 4577776543       477777655543 33445444443

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.79  E-value=1.2e-17  Score=153.42  Aligned_cols=171  Identities=20%  Similarity=0.241  Sum_probs=127.3

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc-hH---HHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY-YE---ARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~-~~---~~~~~~g~~~~~~~  162 (319)
                      +...+|++.++++..        .+..+++++++.++..++ .++++||+|+++.|.|.+ +.   ..+...|++++.++
T Consensus        50 p~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~  120 (377)
T PRK07671         50 PTRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD  120 (377)
T ss_pred             hHHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence            356788999998873        233455555677887765 577899999999999984 33   23455788888776


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       .|++++++++++++++|++++|+||+|.+.   ++++|.++|+++|+++|+|++|....+..    ++ .+ 
T Consensus       121 ~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~~----p~-~~-  184 (377)
T PRK07671        121 T-------SNLEEVEEAIRPNTKAIYVETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQS----PI-SL-  184 (377)
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccCC----hh-hh-
Confidence            4       388999999988999999999999999985   58899999999999999999997643321    11 11 


Q ss_pred             CCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                        ...+++.|+||.++.++ .-.|++++.++       ++.++++..+..
T Consensus       185 --g~Divv~S~sK~l~G~~~~~~G~~v~~~~-------~l~~~~~~~~~~  225 (377)
T PRK07671        185 --GADIVLHSATKYLGGHSDVVAGLVVVNSP-------ELAEDLHFVQNS  225 (377)
T ss_pred             --CCeEEEecCcccccCCccceeEEEEeCcH-------HHHHHHHHHHHh
Confidence              22499999999998765 35566766442       477777766654

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.79  E-value=7.7e-18  Score=158.62  Aligned_cols=201  Identities=24%  Similarity=0.257  Sum_probs=143.7

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHH---hhhCCCCCCCCcEEEeCCHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYL---NRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~---~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+++|+.|.++    +..+..+.++....   .....|.+.  .....++++++++.   .+.+|.  +.+++.+++|++
T Consensus        69 ~~~~lg~g~~~----~~~p~~~~~~~~~~---~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t  139 (447)
T PRK00451         69 YPSFLGAGAYD----HYIPAVVDHIISRS---EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGM--DVANASMYDGAT  139 (447)
T ss_pred             CcccCcccccC----CcCcHHHHHHHhch---hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC--CcceEEecCcHH
Confidence            67889999876    45666665554332   112235441  11344565655433   555553  556899999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHhh----CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968          121 QAIEVILTVLA-RPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP  195 (319)
Q Consensus       121 ~ai~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np  195 (319)
                      +++..++.++. .+||+|+++.+.|+.+...++.    .|.+++.++.++  + .+|++++++++++++++|++++| ||
T Consensus       140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~  215 (447)
T PRK00451        140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF  215 (447)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence            99999988874 7899999999999888776654    689999998754  3 68999999999888999999999 89


Q ss_pred             cccccCHHHHHHHHHHHHHcCCEEEE--eCCCCCccCCCCCCCCCcccCCCCCeEEEe---cCccccCCCcceeeEEEee
Q 020968          196 CGNVYTYQHLQKIAETAKKLGIMVIA--DEVYDHLAFGNTPFVPMGVFGSIVPVLTLG---SISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       196 tG~~~~~~~l~~i~~~~~~~~~~li~--D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~---s~sK~~~~~G~r~G~i~~~  270 (319)
                      ||.+.   ++++|.++|+++|+++++  |.......     . ..   ...+..+++.   ++||.+.+.|+|+||++++
T Consensus       216 tG~v~---~l~~I~~~a~~~~~~~iv~~d~~~~g~~-----~-~~---~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~  283 (447)
T PRK00451        216 FGVIE---DLEEIAEIAHAGGALFIVGVDPVSLGLL-----K-PP---GEYGADIVVGEGQPLGIPLSFGGPYLGFFATR  283 (447)
T ss_pred             CCeeC---CHHHHHHHHHHCCCEEEEEcChHHhccC-----C-Cc---ccCCCCEEEECCCcCCCCCCCCCCCchHHHhh
Confidence            99994   499999999999999988  43321111     0 11   1112235555   6788888889999999875


Q ss_pred             C
Q 020968          271 D  271 (319)
Q Consensus       271 ~  271 (319)
                      .
T Consensus       284 ~  284 (447)
T PRK00451        284 K  284 (447)
T ss_pred             H
Confidence            3

>PRK05968 hypothetical protein; Provisional

Probab=99.79  E-value=2.5e-17  Score=151.95  Aligned_cols=180  Identities=20%  Similarity=0.206  Sum_probs=133.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~  163 (319)
                      ...+|++.++++++        .+..+++++++.|+..++.+++++||+|+++.+.|...    ...+...|+++..++.
T Consensus        64 ~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (389)
T PRK05968         64 TVRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG  135 (389)
T ss_pred             hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence            46799999999883        23456667778899999999999999999999999763    3456678999888764


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                             .|++++++++ +++++|++++|+||++.+   .++++|.++|+++|+++|+|++|....+..    ++. .. 
T Consensus       136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~~-~g-  198 (389)
T PRK05968        136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PIT-LG-  198 (389)
T ss_pred             -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----chh-cC-
Confidence                   2888999887 568899999877777666   889999999999999999999998754322    111 11 


Q ss_pred             CCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh--hcCCcchHHHHH
Q 020968          244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQFL  302 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~  302 (319)
                        ..+++.|+||.++.+| .+.|+++++.        +++++++....  .....+++.+..
T Consensus       199 --~Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~  250 (389)
T PRK05968        199 --VDLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWL  250 (389)
T ss_pred             --CcEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHH
Confidence              2388899999998865 5788887532        46777665433  223345544444

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.79  E-value=8.1e-18  Score=157.36  Aligned_cols=241  Identities=14%  Similarity=0.063  Sum_probs=160.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.....- -..+|.+.+++.+++..... .+.+..+..+|++++++++..       .+++++++|+++|
T Consensus        46 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGseA  116 (423)
T TIGR00713        46 DGNEYIDYVLSWGPLIL-GHAHPRVVEAVKEALERGTS-YGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGTEA  116 (423)
T ss_pred             CCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHHHH
Confidence            47788999888644211 14578999999998876542 222455678999999988722       3689999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhh---CCCeEEEEeccCC-------CCC---cCCHHHHHhhhc---cCc
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARATH---SHLEVRHFDLLPA-------KGW---EVDLDAVEALAD---ENT  184 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~-------~~~---~~d~~~l~~~l~---~~~  184 (319)
                      +..+++...  ...++|+...++|+++...+..   .+......+..+.       ..+   ..|++.+++.+.   +++
T Consensus       117 ~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~  196 (423)
T TIGR00713       117 TMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEI  196 (423)
T ss_pred             HHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcE
Confidence            999888643  2458999999999886433322   1111000010000       000   027889998886   456


Q ss_pred             eEEEEc-CCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968          185 VALVII-NPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW  262 (319)
Q Consensus       185 ~~v~l~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~  262 (319)
                      ++|++. .++| +|.+.+ .+.+++|.++|+++|+++|+||+|.++.++. .. ....+.....   +.+|||.++ +|+
T Consensus       197 aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~-~~-~~~~~~~~pD---i~t~sK~l~-~G~  269 (423)
T TIGR00713       197 AGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL-GG-AQEYFGVEPD---LTTLGKIIG-GGL  269 (423)
T ss_pred             EEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc-ch-hHHHhCCCcc---hhhhhhhhc-CCC
Confidence            677765 6777 788877 6889999999999999999999999885432 11 1111221122   237999987 899


Q ss_pred             eeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          263 RLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       263 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      |+||++++.        ++++.+...    ...+.+.++++|.++..++
T Consensus       270 pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l  310 (423)
T TIGR00713       270 PVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATL  310 (423)
T ss_pred             ceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHH
Confidence            999999853        466666531    1224467888888766654

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=1.9e-17  Score=152.74  Aligned_cols=170  Identities=17%  Similarity=0.167  Sum_probs=128.9

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  163 (319)
                      ...+|++.++++++      .. +.+ ++++|+.++.+++. ++++||+|+++.|.|....    ..++..|+++..++.
T Consensus        55 ~~~~le~~lA~l~g------~~-~~v-~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  125 (390)
T PRK08064         55 TREALEDIIAELEG------GT-KGF-AFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM  125 (390)
T ss_pred             hHHHHHHHHHHHhC------CC-CeE-EECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence            46788999998883      22 344 44555778888886 6789999999999997432    455678999988875


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                             .|++++++.+++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|......    .++ .+  
T Consensus       126 -------~d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~--  188 (390)
T PRK08064        126 -------TNLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DL--  188 (390)
T ss_pred             -------CCHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch-hh--
Confidence                   2789999999888999999999999999954   889999999999999999999864321    111 12  


Q ss_pred             CCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          244 IVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                       +..+++.|+||.++.+ |...|++++.+       +++.++++..+..
T Consensus       189 -g~Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~  229 (390)
T PRK08064        189 -GADVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNS  229 (390)
T ss_pred             -CCcEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHh
Confidence             2348999999998754 46778877654       2477777766653

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.78  E-value=4.4e-17  Score=149.68  Aligned_cols=169  Identities=21%  Similarity=0.252  Sum_probs=126.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  163 (319)
                      ....|++.++++.+        .+..+++++++.|+.+++ .++++||+|++++|.|....    ..+...|+++..++.
T Consensus        51 ~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~  121 (380)
T PRK06176         51 TRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT  121 (380)
T ss_pred             hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence            46788888888872        334566666678998766 46789999999999997543    345667888777764


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                             .|++++++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|....+..    ++ ... 
T Consensus       122 -------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~----p~-~~g-  185 (380)
T PRK06176        122 -------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN----PL-LLG-  185 (380)
T ss_pred             -------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC----cc-ccC-
Confidence                   3899999999888999999999999999965   8899999999999999999998644321    22 122 


Q ss_pred             CCCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          244 IVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                        -.+++.|++|.++.+|- -.|++++.+       +++.++++..+.
T Consensus       186 --aDivv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~  224 (380)
T PRK06176        186 --ADIVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQN  224 (380)
T ss_pred             --CCEEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHH
Confidence              23999999999988764 455555533       246666665544

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.77  E-value=3.7e-17  Score=149.92  Aligned_cols=165  Identities=16%  Similarity=0.147  Sum_probs=124.2

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHhhCCCeEEEEeccCC
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY--EARATHSHLEVRHFDLLPA  166 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~  166 (319)
                      .+++|+.+++++    |..-+++.|++|+|++++++.++.++..+||++++..+.+.+.  ...++..|.+++.++.++ 
T Consensus        37 ~~~~r~~la~l~----~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~-  111 (363)
T TIGR02326        37 VEQIRQQLLALA----TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE-  111 (363)
T ss_pred             HHHHHHHHHHHh----CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence            345566666666    3222234799999999999999999988888877766655443  466788999999998753 


Q ss_pred             CCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968          167 KGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI  244 (319)
Q Consensus       167 ~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~  244 (319)
                       +..+|++.+++++++  +++++++++++||||..++   +++|.++|+++|+++++|++++.    +..+.++..++. 
T Consensus       112 -~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~~~~-  182 (363)
T TIGR02326       112 -VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAELHI-  182 (363)
T ss_pred             -CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc----cCcccchhhcCc-
Confidence             456899999998874  3467888999999999977   78999999999999999988763    222334444332 


Q ss_pred             CCeEEEecCccccC-CCcceeeEEEeeC
Q 020968          245 VPVLTLGSISKRWI-VPGWRLGWLVTSD  271 (319)
Q Consensus       245 ~~vi~~~s~sK~~~-~~G~r~G~i~~~~  271 (319)
                        .+++.|++|+++ .+|  +||++++.
T Consensus       183 --D~~~~s~~K~l~~p~G--~G~l~~~~  206 (363)
T TIGR02326       183 --DYLISSANKCIQGVPG--FGFVIARQ  206 (363)
T ss_pred             --cEEEecCccccccCCc--ceEEEECH
Confidence              388899999863 346  79998854

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.77  E-value=5.9e-17  Score=148.49  Aligned_cols=182  Identities=16%  Similarity=0.141  Sum_probs=128.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEEeccC
Q 020968           90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDLLP  165 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~  165 (319)
                      ...++.+++.+....+    .+..++++++++|++.++.+++++||+|+++.|.|.++..    .++..|+++..++.. 
T Consensus        63 nPt~~~Le~~la~le~----~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-  137 (395)
T PRK05967         63 TPTTDALCKAIDALEG----SAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-  137 (395)
T ss_pred             ChHHHHHHHHHHHHhC----CCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-
Confidence            3444444444433222    3345666668999999999999999999999999988764    457889988887531 


Q ss_pred             CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       166 ~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                            +.+.+++++++++++|++++|+||++.+   .++++|+++|+++|+++++|++|....+-    .++. +   +
T Consensus       138 ------~~e~l~~al~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~----~pl~-~---G  200 (395)
T PRK05967        138 ------IGAGIAKLMRPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYF----RPLD-F---G  200 (395)
T ss_pred             ------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceec----ChhH-c---C
Confidence                  4577999999899999999999998877   78999999999999999999999863321    1111 2   2


Q ss_pred             CeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHH
Q 020968          246 PVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQF  301 (319)
Q Consensus       246 ~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~  301 (319)
                      ..|++.|.+|..+. .+...|+++. ++       ++.++++.... .....++...+
T Consensus       201 aDivv~S~tKy~~Gh~d~~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~da~  250 (395)
T PRK05967        201 VDISIHAATKYPSGHSDILLGTVSA-NE-------KCWPQLLEAHGTLGLCAGPDDTY  250 (395)
T ss_pred             CCEEEEecccccCCCCCeeEEEEEc-CH-------HHHHHHHHHHHHcCCCCCHHHHH
Confidence            34999999999766 3566665543 32       35555553333 23344554433

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.77  E-value=2.3e-17  Score=147.20  Aligned_cols=197  Identities=21%  Similarity=0.256  Sum_probs=156.7

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----CCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      |.|+....+     ++.+++.++|...+....     .+.|+-  ....++.|+.+|+.+      ++++++|++|+|+|
T Consensus         3 iYlD~~ATT-----p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~T   71 (386)
T COG1104           3 IYLDNAATT-----PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGAT   71 (386)
T ss_pred             ccccccccC-----CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCc
Confidence            445555533     778999999998876531     112221  133578888899888      56889999999999


Q ss_pred             HHHHHHHHHh--c----CCCCEEEEcCCCCcchHHHHhhC---CCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          121 QAIEVILTVL--A----RPGANILLPRPGFPYYEARATHS---HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       121 ~ai~~~~~~l--~----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      ++.++++...  .    +.|.+|+++.-.|+.....++.+   |.++.+++++.  +..+|+++|++++++++.+|.+..
T Consensus        72 EsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~  149 (386)
T COG1104          72 ESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMH  149 (386)
T ss_pred             HHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEe
Confidence            9999999873  2    25789999999998877777666   99999999865  457999999999999999999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      .||.+|++   +++++|.++|+++++++++|.++..    |+-+..+..+.-   .+...|-+|.+|..|  +|.+..
T Consensus       150 aNnE~G~I---QpI~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~v---D~ls~SaHK~~GpkG--iGaLyv  215 (386)
T COG1104         150 ANNETGTI---QPIAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGV---DLLSFSAHKFGGPKG--IGALYV  215 (386)
T ss_pred             cccCeeec---ccHHHHHHHHHHcCCeEEEehhhhc----CceeccccccCc---ceEEeehhhccCCCc--eEEEEE
Confidence            99999999   5699999999999999999999987    555555554332   377889999988888  677765

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.77  E-value=6.6e-17  Score=153.01  Aligned_cols=207  Identities=16%  Similarity=0.170  Sum_probs=151.3

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC---CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY---SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .-++.|+++    +..++.+.+++.+...-.....|   ....|..+++..+.+++.+.+|.  +...+..++|+.+.+.
T Consensus        71 ~~~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~  144 (481)
T PRK04366         71 GFYPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELT  144 (481)
T ss_pred             ceecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHH
Confidence            346777766    57888999988875222234567   34567889999999999887774  3334444555555554


Q ss_pred             HH--HH-HhcCCCC----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccc
Q 020968          125 VI--LT-VLARPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG  197 (319)
Q Consensus       125 ~~--~~-~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG  197 (319)
                      .+  ++ .+.++||    +|+++.|.|+.+...++..|++++.++.+  .++.+|++++++++++++++|++++|+ |||
T Consensus       145 ~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG  221 (481)
T PRK04366        145 GLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLG  221 (481)
T ss_pred             HHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccc
Confidence            32  33 3456666    99999999999999999999999999874  346899999999998889999999988 999


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEEEeeC
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSD  271 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~~~  271 (319)
                      .+  ..++++|+++|+++|+++++|.++..-..+ .  .....+   +-.++++|.+|+|+.|    |-.+|++.+.+
T Consensus       222 ~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~--~~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~  291 (481)
T PRK04366        222 LF--ERNILEIAEIVHEAGGLLYYDGANLNAILG-K--ARPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE  291 (481)
T ss_pred             cc--chHHHHHHHHHHHcCCEEEEEecChhhhcc-c--CCcccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence            64  357999999999999999999998532111 1  111222   2349999999998765    45678877643

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.77  E-value=3.7e-17  Score=151.62  Aligned_cols=238  Identities=14%  Similarity=0.076  Sum_probs=153.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--...- ---.|.+.+++.++++.....  ... ...+....+++.+.+..    ..+.+++++++++|
T Consensus        38 ~G~~~lD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~--~~~-~~~~~~~~l~~~l~~~~----~~~~~~~~~SGseA  109 (396)
T PRK04073         38 EGNRYMDMLSAYSAVNQ-GHRHPKIIQALKDQADKVTLT--SRA-FHSDQLGPWYEKVAKLT----GKDMVLPMNTGAEA  109 (396)
T ss_pred             CCCEEEEcCCCHHhccC-CCCCHHHHHHHHHHHhhcccc--ccc-cCCHHHHHHHHHHHhcC----CCCeEEEcCChHHH
Confidence            36667787766322111 124688999999888754321  111 11223333444443322    24689999999999


Q ss_pred             HHHHHHHhcC---------CC-CEEEEcCCCCcchH-HHHhhCCCe------------EEEEeccCCCCCcCCHHHHHhh
Q 020968          123 IEVILTVLAR---------PG-ANILLPRPGFPYYE-ARATHSHLE------------VRHFDLLPAKGWEVDLDAVEAL  179 (319)
Q Consensus       123 i~~~~~~l~~---------~g-d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~  179 (319)
                      +..+++....         +| ++|+...-+|++.. ......+..            +..++.       .|++.+++.
T Consensus       110 ~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  182 (396)
T PRK04073        110 VETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKAA  182 (396)
T ss_pred             HHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHHh
Confidence            9999887631         34 67888877776543 222222211            111111       278999998


Q ss_pred             hccCceEEEEcCCCCccccccCHH-HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968          180 ADENTVALVIINPGNPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       180 l~~~~~~v~l~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                      +++++++|++..++||+|.+++.+ .+++|.++|+++|+++|+||+|.++...+.... .........+   .++||.++
T Consensus       183 i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pdi---~~~sK~lg  258 (396)
T PRK04073        183 ITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPDM---YILGKALG  258 (396)
T ss_pred             cccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCCE---EEeccccc
Confidence            887888888888899999988755 599999999999999999999998766553221 1111111222   35799999


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++|+|+||++++.        ++++.+..... ...+.+++.|.++..++
T Consensus       259 ~gg~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL  300 (396)
T PRK04073        259 GGVFPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAAL  300 (396)
T ss_pred             CCCCcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHH
Confidence            9999999999853        46666654322 34456888888777655

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.76  E-value=8.1e-17  Score=145.82  Aligned_cols=214  Identities=19%  Similarity=0.214  Sum_probs=169.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..++||+.+|   |..+.-.|.+.+++.+.++....      .-++...-+.+|++.+|+|+        ..+..++.+
T Consensus        38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f~  106 (388)
T COG0156          38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLFS  106 (388)
T ss_pred             CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEEc
Confidence            57799999999   45577788899998888876321      12444455788999999998        456788888


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIIN  191 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~  191 (319)
                      ++-.|+..++.++++++|.|+...-.|.+....++..+.+.+.+.-       .|++.||+.+.+      +.++|+...
T Consensus       107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg  179 (388)
T COG0156         107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG  179 (388)
T ss_pred             ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence            8888999999999999999999999999999999999999887774       488999998865      245666667


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc--cCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV--FGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      .-...|.+   .++.+|++++++|+.++++||+|+-..+++........  +...+..|+++||+|+||..|   ||+++
T Consensus       180 VfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g  253 (388)
T COG0156         180 VFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG  253 (388)
T ss_pred             cccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence            78889999   45999999999999999999999988877544333322  333455799999999999998   99998


Q ss_pred             eCCCCCccchHHHHHHHHhh
Q 020968          270 SDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~  289 (319)
                      +.        .+++.++...
T Consensus       254 ~~--------~~~d~L~~~a  265 (388)
T COG0156         254 SA--------ALIDYLRNRA  265 (388)
T ss_pred             cH--------HHHHHHHHhC
Confidence            54        4666666553

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.76  E-value=5.2e-17  Score=151.24  Aligned_cols=157  Identities=18%  Similarity=0.172  Sum_probs=128.6

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~  163 (319)
                      ...+|++.+|+++.        .+..++++++++|+++++.++.++||+|+++...|......    +...|+++..++.
T Consensus        65 ~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~  136 (433)
T PRK08134         65 TVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP  136 (433)
T ss_pred             HHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence            46789999998883        33578999999999999999999999999999999765433    3558988888875


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      +       |++++++++++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|.++..-..    ..++ .+. 
T Consensus       137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~G-  200 (433)
T PRK08134        137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EHG-  200 (433)
T ss_pred             C-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hcC-
Confidence            2       799999999999999999999999999965   89999999999999999999875221    1222 222 


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEee
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                        -.+++.|.+|.++.+|..+|.+++.
T Consensus       201 --aD~vv~S~tK~l~g~g~~~gG~v~~  225 (433)
T PRK08134        201 --ADLVYHSATKFLGGHGTAIGGVLVD  225 (433)
T ss_pred             --CCEEEeccccccCCCCCceEEEEEe
Confidence              2399999999998899888887663

>PLN02509 cystathionine beta-lyase

Probab=99.76  E-value=1.1e-16  Score=149.63  Aligned_cols=165  Identities=20%  Similarity=0.240  Sum_probs=124.2

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCe
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLE  157 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~  157 (319)
                      .|... |.+ .++++.+.+.+..    ..+..++++++++++..++ .++++||+|+++.+.|..+..    .+...|++
T Consensus       126 ~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~  198 (464)
T PLN02509        126 DYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVV  198 (464)
T ss_pred             ccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeE
Confidence            57654 443 4666666665533    3567778888899997666 567899999999999988753    34567888


Q ss_pred             EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968          158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP  237 (319)
Q Consensus       158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~  237 (319)
                      +..++.       .|++++++++++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|...... .   +
T Consensus       199 v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~---p  264 (464)
T PLN02509        199 VKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS-R---P  264 (464)
T ss_pred             EEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC-C---h
Confidence            887753       37899999998889999999999999998   77999999999999999999998754321 1   1


Q ss_pred             CcccCCCCCeEEEecCccccCCCcc-eeeEEEeeC
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSD  271 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~G~-r~G~i~~~~  271 (319)
                      +. .   ...+++.|++|.++.+|- -.|.+++.+
T Consensus       265 l~-~---gaDivv~S~tK~l~G~gdv~gG~v~~~~  295 (464)
T PLN02509        265 LE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG  295 (464)
T ss_pred             hh-c---CCcEEEecCcccccCCCccceeEEEecc
Confidence            11 1   224999999999877554 456666543

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.76  E-value=6.3e-17  Score=148.86  Aligned_cols=167  Identities=20%  Similarity=0.229  Sum_probs=124.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCCcchHHHHhhCCCeEEEEec
Q 020968           90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA------RPGANILLPRPGFPYYEARATHSHLEVRHFDL  163 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  163 (319)
                      .++++.+++++      +++++++++++|+++++..++.++.      ++||+|+++.+.|..+...++..|++++.++.
T Consensus        62 ~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~  135 (373)
T TIGR03812        62 EEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPL  135 (373)
T ss_pred             HHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEee
Confidence            45666666666      3456788999999999988877654      36789999999999999999999999999987


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC------CCCCCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG------NTPFVP  237 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~------~~~~~~  237 (319)
                      +  .++.+|++++++.+.+++..+++..|+||||.+.+   +++|.++|+++|+++++|++|+.+...      +.....
T Consensus       136 ~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d  210 (373)
T TIGR03812       136 D--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD  210 (373)
T ss_pred             C--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence            5  35678999999998877755555568999999955   888999999999999999999865321      000111


Q ss_pred             CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +...   .-..+..|.+|+ ++++.++|+++..+
T Consensus       211 ~~~~---~~d~~~~s~~K~-~~~~~~~G~~~~~~  240 (373)
T TIGR03812       211 FSLP---GVQSITIDPHKM-GLSPIPAGGILFRS  240 (373)
T ss_pred             ccCC---CCCEEEECcccc-CCCcCCceEEEEeC
Confidence            1110   111455688894 78888999877644

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.76  E-value=3.3e-16  Score=146.31  Aligned_cols=211  Identities=19%  Similarity=0.227  Sum_probs=149.9

Q ss_pred             CeEeccCCCCCCCCC-CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           46 PLIPLGHGDPSAFPS-FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .+..|+.|.|+.-.. ...+..-.+++.+.+..... .+++  ...+|++++++++.        .+++++++|+++|+.
T Consensus        24 ~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~   92 (438)
T PRK15407         24 APKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANL   92 (438)
T ss_pred             ccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHH
Confidence            345578888764111 12233334445454444322 3333  35799999999983        357999999999999


Q ss_pred             HHHHHh---------cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968          125 VILTVL---------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP  195 (319)
Q Consensus       125 ~~~~~l---------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np  195 (319)
                      .++.++         +++||+|+++.++|..+...+...|++++.+++++ ..+.+|++.+++.+.+++++|+++++   
T Consensus        93 ~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---  168 (438)
T PRK15407         93 LAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---  168 (438)
T ss_pred             HHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---
Confidence            999876         37899999999999999999999999999998864 45789999999999888999998875   


Q ss_pred             cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCC
Q 020968          196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~  272 (319)
                      +|..   .++++|.++|+++|++||+|++++... +.+..   +.++.+    +.+.||.  |.+. .|- -|++++.++
T Consensus       169 ~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~-~ge-GG~l~t~d~  236 (438)
T PRK15407        169 LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHIT-MGE-GGAVFTNDP  236 (438)
T ss_pred             CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCcc-ccC-ceEEEECCH
Confidence            4443   468999999999999999999998643 33322   223332    5556665  5543 233 489888653


Q ss_pred             CCCccchHHHHHHHHhhh
Q 020968          273 NGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~  290 (319)
                             ++.++++..+.
T Consensus       237 -------~l~~~~~~~~~  247 (438)
T PRK15407        237 -------LLKKIIESFRD  247 (438)
T ss_pred             -------HHHHHHHHHHH
Confidence                   47776665544

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.76  E-value=8.7e-17  Score=149.42  Aligned_cols=237  Identities=14%  Similarity=0.092  Sum_probs=153.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..+++|..|.-.... ---.|.+.+++.++++...... +.......+|.+.++++.        ..+.+++++++++
T Consensus        39 ~g~~~lD~~~~~~~~~~-Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~  109 (401)
T PRK00854         39 DGNRYLDCLSAYSAVNQ-GHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAE  109 (401)
T ss_pred             CCCEEEEcCcchhhccC-CCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHH
Confidence            35667887666322100 1126889999998887643211 112223445666666554        2468999999999


Q ss_pred             HHHHHHHHhcC---------CC-CEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcCCHHHHHh
Q 020968          122 AIEVILTVLAR---------PG-ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEA  178 (319)
Q Consensus       122 ai~~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~  178 (319)
                      |+..+++.+..         +| ++|++..-.|.+....+...+.             ++..++       ..|++.+++
T Consensus       110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~  182 (401)
T PRK00854        110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA  182 (401)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence            99999988742         23 6788877777664322222221             111121       148899999


Q ss_pred             hhccCceEEEEcCCCCccccccCH-HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968          179 LADENTVALVIINPGNPCGNVYTY-QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW  257 (319)
Q Consensus       179 ~l~~~~~~v~l~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~  257 (319)
                      .+.+++++|++.+|+||+|.+++. +.+++|.++|+++|+++|+||+|.++.+.+... .......... +++  ++|++
T Consensus       183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D-~~~--~~K~l  258 (401)
T PRK00854        183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEAD-VTL--IGKAL  258 (401)
T ss_pred             HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCC-EEE--ecccc
Confidence            998889999999999999999874 459999999999999999999998765554211 1111111112 333  36998


Q ss_pred             CCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       258 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      +...+|+||+++++        ++++.+..... ...+.+++.|.++..++
T Consensus       259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L  301 (401)
T PRK00854        259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAAL  301 (401)
T ss_pred             cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHH
Confidence            66558999999854        46665543222 23456788887777655

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.76  E-value=5.5e-16  Score=143.60  Aligned_cols=214  Identities=14%  Similarity=0.139  Sum_probs=155.8

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      ..+++|+.+|   |..+...|.++++..+.+++....      -++....+.+|++.+|+++        ..+..++.++
T Consensus       102 r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~sS  170 (476)
T PLN02955        102 KKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCPT  170 (476)
T ss_pred             ceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEECC
Confidence            4789999998   455788899999999888764321      1222223478999999998        5678888888


Q ss_pred             HHHHHHHHHHHhc--------------CCCCEEEEcCCCCcchHHHHhhC----CCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968          119 CTQAIEVILTVLA--------------RPGANILLPRPGFPYYEARATHS----HLEVRHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       119 ~t~ai~~~~~~l~--------------~~gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                      +..|...++.++.              ++++.|++..-.|.+....++..    +.++..++.       -|++.|++.+
T Consensus       171 Gy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L  243 (476)
T PLN02955        171 GFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLL  243 (476)
T ss_pred             hHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHH
Confidence            8888888888762              45678888888898877777765    466665553       3888898887


Q ss_pred             cc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccc
Q 020968          181 DE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKR  256 (319)
Q Consensus       181 ~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~  256 (319)
                      +.   +.+.|++....++.|.+.+   +++|.++|++||+++|+||+|+.+.++.........+. ..+..|+++||||+
T Consensus       244 ~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA  320 (476)
T PLN02955        244 SSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKA  320 (476)
T ss_pred             HhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccc
Confidence            43   3345555555899999976   88888999999999999999998777543222222222 13567999999999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      +|..|   |++++++        ++++.++....
T Consensus       321 ~G~~G---Gfi~gs~--------~~~~~l~~~~~  343 (476)
T PLN02955        321 AGCHG---GFIACSK--------KWKQLIQSRGR  343 (476)
T ss_pred             hhccC---ceeecHH--------HHHHHHHHhCC
Confidence            87777   9998854        46777775543

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.75  E-value=3e-16  Score=144.82  Aligned_cols=194  Identities=22%  Similarity=0.244  Sum_probs=144.5

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP  142 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p  142 (319)
                      .+...+++.+.+..+.   |.......+||++++++++        .++.++++|+++|+..++.++ +++||+|+++.+
T Consensus         9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~   77 (380)
T TIGR03588         9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPI   77 (380)
T ss_pred             CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence            4555777777776543   3333467899999999993        245677778999999999998 789999999999


Q ss_pred             CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCE
Q 020968          143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM  218 (319)
Q Consensus       143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~  218 (319)
                      +|..+...+...|++++.+++++ +++.+|++++++.++    +++++|++++   ++|...   ++++|.++|+++|++
T Consensus        78 ~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~---~~~~i~~l~~~~~~~  150 (380)
T TIGR03588        78 TFVATANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSV---DMQAIAALAKKHGLK  150 (380)
T ss_pred             chHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccC---CHHHHHHHHHHcCCE
Confidence            99999888999999999999865 346799999999998    6788887654   578774   489999999999999


Q ss_pred             EEEeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          219 VIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       219 li~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      ||+|++++... +++..   +....-.  .+.+.|++  |.++.+  ..|+++..++       ++.++++..+
T Consensus       151 lI~D~a~a~g~~~~~~~---~g~~~~~--d~~~~S~~~~K~~~~~--~GG~v~~~~~-------~~~~~~~~~~  210 (380)
T TIGR03588       151 IIEDASHALGAEYGGKP---VGNCRYA--DATVFSFHPVKIITTA--EGGAVTTNDE-------ELAERMRLLR  210 (380)
T ss_pred             EEEECCCcccCccCCEe---CCCcccc--ceEEEecCCCCccccc--CceEEEECCH-------HHHHHHHHHH
Confidence            99999998642 33322   2221011  26677765  876543  4677777553       4677666543

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.75  E-value=1.1e-16  Score=149.10  Aligned_cols=157  Identities=19%  Similarity=0.179  Sum_probs=127.4

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  163 (319)
                      ....|++.++++.        ..+..++++++++|+.+++.+++++||+|+++.+.|....    ..+...|++++.++.
T Consensus        64 ~~~~le~~lA~l~--------g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (427)
T PRK05994         64 TNAVLEERVAALE--------GGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA  135 (427)
T ss_pred             cHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence            4577888888887        3345888999999999999999999999999999998643    346778998888764


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                             .|++.+++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|.....    ..++ .+  
T Consensus       136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~----~~pl-~~--  198 (427)
T PRK05994        136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL----IRPI-EH--  198 (427)
T ss_pred             -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc----CCcc-cc--
Confidence                   2789999999888999999999999999976   88999999999999999999975221    1122 12  


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEee
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                       ...+++.|++|.++.+|-.+|.+++.
T Consensus       199 -gaDivv~S~tK~lgg~~~~~gG~v~~  224 (427)
T PRK05994        199 -GADIVVHSLTKFLGGHGNSMGGIIVD  224 (427)
T ss_pred             -CCcEEEEcCccccCCCCCcEEEEEEe
Confidence             22399999999999888778877663

>PRK07505 hypothetical protein; Provisional

Probab=99.75  E-value=3.7e-16  Score=145.21  Aligned_cols=230  Identities=14%  Similarity=0.162  Sum_probs=142.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-CCCCCC-----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..++||...++   ..+...|.+.+++.+++.... ......     .....++++.+++++    |    . +.++++
T Consensus        45 g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~----~-~~~~~~  112 (402)
T PRK07505         45 GHTFVNFVSCSY---LGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G----A-SVLTFT  112 (402)
T ss_pred             CceEEEeecCCc---cCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C----C-CEEEEC
Confidence            666888877542   223668999999999886521 111111     123355666666655    2    2 445444


Q ss_pred             CHHHHHHHHHHHhc----CCCC-EEEEcCCCCcc-hH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEE
Q 020968          118 GCTQAIEVILTVLA----RPGA-NILLPRPGFPY-YE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI  189 (319)
Q Consensus       118 G~t~ai~~~~~~l~----~~gd-~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l  189 (319)
                      ++++|...++..+.    .+|+ .|++.+..|++ +.  ......+.+++.++.       .|++.+++++.++++++++
T Consensus       113 sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl  185 (402)
T PRK07505        113 SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAYV  185 (402)
T ss_pred             ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEE
Confidence            55667776665432    2232 35555545433 21  111223456666654       3889999988777789999


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-CCCcccC--CCCCeEEEecCccccCCCcceeeE
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFG--SIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~--~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      ++|+||+|.+++   +++|.++|+++++++|+||+|+...++.... .....+.  ..+++++++|+||.|+++|   ||
T Consensus       186 ~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~  259 (402)
T PRK07505        186 ADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GV  259 (402)
T ss_pred             EecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eE
Confidence            999999999987   7888899999999999999986543332111 1111222  3467899999999998887   88


Q ss_pred             EEeeCCCCCccchHHHHHHHHhhhh--c-CCcchHHHHHHHH
Q 020968          267 LVTSDPNGILQDSGIVDSIKSFLNI--S-SDPATFIQFLKSS  305 (319)
Q Consensus       267 i~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~q~~~~~  305 (319)
                      +++++       +++++.++.....  + ..+++++..++..
T Consensus       260 ~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a  294 (402)
T PRK07505        260 IMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAILA  294 (402)
T ss_pred             EEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHHHH
Confidence            87544       2477777665432  1 2334455555444

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.75  E-value=3.5e-16  Score=143.89  Aligned_cols=199  Identities=23%  Similarity=0.291  Sum_probs=149.2

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC----CCC----CcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCC
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC----YSS----TVGILPARRAIADYLNRDLPYKLSP-DDVYLTLG  118 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G  118 (319)
                      |.|+.+.+.     +.|+.+.+++.+.+.......    +..    .....+.|+.+++++      +.++ ++|++++|
T Consensus         1 iYld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~   69 (371)
T PF00266_consen    1 IYLDNAGTG-----PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSN   69 (371)
T ss_dssp             EEEBTSSS------B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESS
T ss_pred             CEeeCCCcc-----CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccc
Confidence            345666554     778999999998865432111    111    122357777888888      3466 79999999


Q ss_pred             HHHHHHHHHHHh---cCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          119 CTQAIEVILTVL---ARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       119 ~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      ++.+++.++.++   .++|++|++.+-.|++..    ...+..|+++..++.+..  ..+|++++++.++++++++++++
T Consensus        70 ~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~  147 (371)
T PF00266_consen   70 GTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISH  147 (371)
T ss_dssp             HHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEES
T ss_pred             cchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeec
Confidence            999999999999   789999999999987644    455578999999987643  36899999999999999999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+|.||...+   +++|.++|+++|+++++|.+++.    +..+..+..++   -.+++.|..|.++.+|  +|++.+.+
T Consensus       148 ~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~----g~~~id~~~~~---~D~~~~s~~Kl~gp~G--~g~l~v~~  215 (371)
T PF00266_consen  148 VENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSA----GCVPIDLDELG---ADFLVFSSHKLGGPPG--LGFLYVRP  215 (371)
T ss_dssp             BETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTT----TTSS--TTTTT---ESEEEEESTSTTSSST--EEEEEEEH
T ss_pred             ccccccEEee---eceehhhhhccCCceeEechhcc----ccccccccccc---cceeeecccccCCCCc--hhhheehh
Confidence            9999999977   88999999999999999999987    33333333333   2389999999544455  78888753

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.74  E-value=1.7e-16  Score=147.48  Aligned_cols=243  Identities=15%  Similarity=0.114  Sum_probs=154.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ++..++||..|--..+..+. .|.+.+++.+++.....  ++.. ...+....+++.+.+..    ..+.+++++++++|
T Consensus        37 dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA  108 (406)
T PRK12381         37 QGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWH--TGNG-YTNEPVLRLAKKLIDAT----FADRVFFCNSGAEA  108 (406)
T ss_pred             CCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhccc--ccCc-cCCHHHHHHHHHHHhhC----CCCeEEEcCCcHHH
Confidence            36678898776322223344 78999999998865211  1111 11222334444444322    24699999999999


Q ss_pred             HHHHHHHhc--------CCCCEEEEcCCCCcchHHHHhhCCCeE-EE---EeccC--CCCCcCCHHHHHhhhccCceEEE
Q 020968          123 IEVILTVLA--------RPGANILLPRPGFPYYEARATHSHLEV-RH---FDLLP--AKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       123 i~~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~-~~---~~~~~--~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      +..+++...        ....+|+..+..|++....+...+... ..   .+..+  ..-...|++.+++.+.+++++|+
T Consensus       109 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi  188 (406)
T PRK12381        109 NEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVI  188 (406)
T ss_pred             HHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEE
Confidence            999998752        134789999999987654333222211 00   00000  00012478999998877766666


Q ss_pred             EcCCCCcccccc--CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968          189 IINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       189 l~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      + .|.|++|-++  +.+.++++.++|++||+++|+||+|.++.+.|... ....+.-...   +.++||.++ +|+|+||
T Consensus       189 i-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~ig~  262 (406)
T PRK12381        189 V-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFPIGA  262 (406)
T ss_pred             E-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCceEE
Confidence            5 6888887544  78999999999999999999999998886666432 2122221112   349999975 8999999


Q ss_pred             EEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          267 LVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       267 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      +++++        ++++.+.... ..+.+.+++.|.++..++
T Consensus       263 ~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l  296 (406)
T PRK12381        263 MLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVL  296 (406)
T ss_pred             EEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99854        4666665422 233456788887766643

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.74  E-value=2.3e-16  Score=143.94  Aligned_cols=187  Identities=21%  Similarity=0.244  Sum_probs=140.0

Q ss_pred             HHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcch
Q 020968           69 DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYY  147 (319)
Q Consensus        69 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~  147 (319)
                      +++.+.+.++.   |.......++++.+++++.        .+++++++|+++|+..++.++ .++||+|+++.++|..+
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~   71 (352)
T cd00616           3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT   71 (352)
T ss_pred             HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence            44555555543   3333467899999999982        357888999999999999998 58999999999999999


Q ss_pred             HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC
Q 020968          148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH  227 (319)
Q Consensus       148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~  227 (319)
                      ...+...|.+++.++.++ .++.+|++.+++.+++++++|++++   ++|...+   +++|.++|+++|+++|+|+++..
T Consensus        72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~  144 (352)
T cd00616          72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL  144 (352)
T ss_pred             HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence            889999999999998854 3578999999999988888888765   6898855   88888999999999999999985


Q ss_pred             ccC-CCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          228 LAF-GNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       228 ~~~-~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      ... .+.   .+..+.    .+.+.|++  |.+  ++.+.|++++.++       ++.++++...
T Consensus       145 g~~~~~~---~~~~~~----d~~~~S~~~~K~~--~~~~gg~~~~~~~-------~~~~~~~~~~  193 (352)
T cd00616         145 GATYKGR---KVGTFG----DAGAFSFHPTKNL--TTGEGGAVVTNDE-------ELAERARLLR  193 (352)
T ss_pred             CCeECCE---EcccCc----ceeEEcCCCCCCC--cccCceEEEECCH-------HHHHHHHHHH
Confidence            321 111   111111    25667766  886  4445688887642       4666665543

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.72  E-value=2.3e-15  Score=138.33  Aligned_cols=198  Identities=17%  Similarity=0.080  Sum_probs=129.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC-------CCCCCC------CCcCCHHHHHHHHHHHhhhCCCCCCC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA-------RFNCYS------STVGILPARRAIADYLNRDLPYKLSP  110 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~-------~~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~  110 (319)
                      ...+++|+.+|.   ..+...+.+.+++.+++...       .....+      ...-+.++|+.+|++++.       +
T Consensus         3 ~~~~~~~~s~~Y---L~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~-------~   72 (370)
T PRK05937          3 ESLSIDFVTNDF---LGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA-------P   72 (370)
T ss_pred             CCceEEeECCCc---cCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------C
Confidence            457899999983   44666677777777665442       111111      223467888888888832       2


Q ss_pred             CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------Cc
Q 020968          111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT  184 (319)
Q Consensus       111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~  184 (319)
                      +.+++++|. .++..++..+.++||.|++..-.|......++........++       ..|++.+++.++.      .+
T Consensus        73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~  144 (370)
T PRK05937         73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR  144 (370)
T ss_pred             eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence            335556655 555556666667888888888888776666665433333232       2588999988862      34


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW  262 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~  262 (319)
                      .+|++++++|++|.+.+   +++|.++|+++|+++++|++|+...++.........+...+..+.+.|+||.++..|.
T Consensus       145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~  219 (370)
T PRK05937        145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA  219 (370)
T ss_pred             EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCce
Confidence            56778899999999977   8899999999999999999998643321110000111111223678999999988773

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.72  E-value=4.9e-16  Score=144.35  Aligned_cols=245  Identities=14%  Similarity=0.090  Sum_probs=151.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-...- --.+|.+.+++.+.++.....  ... ...+..+.+.+.+.+..    ..+.+++++++++|
T Consensus        29 dg~~~lD~~~~~~~~~~-Gh~~p~v~~a~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~----~~~~~~~~~SGs~A  100 (400)
T PTZ00125         29 EGKKYYDFLSAYSAVNQ-GHCHPKILAALINQAQKLTLT--SRA-FYNDVLGLAEKYITDLF----GYDKVLPMNSGAEA  100 (400)
T ss_pred             CCCEEEEcccCHhhccC-CcCCHHHHHHHHHHHHhcccc--ccc-ccCHHHHHHHHHHHhCC----CCCEEEEeCCcHHH
Confidence            46778898877432100 124688999999887653221  111 11223344444444322    24689999999999


Q ss_pred             HHHHHHHhcC----------CCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccC-CCC----CcCCHHHHHhhhc-cCce
Q 020968          123 IEVILTVLAR----------PGANILLPRPGFPYYEARAT-HSHLEVRHFDLLP-AKG----WEVDLDAVEALAD-ENTV  185 (319)
Q Consensus       123 i~~~~~~l~~----------~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~----~~~d~~~l~~~l~-~~~~  185 (319)
                      +..+++....          .+++|++.+-.|.+...... ..+.........+ ..+    ...|++.+++.+. ++++
T Consensus       101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  180 (400)
T PTZ00125        101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVA  180 (400)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeE
Confidence            9999987641          34788888888876433222 2221110000000 000    0138999999986 5678


Q ss_pred             EEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          186 ALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       186 ~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +|++..++||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|.... .........++   ++||.++.+++|+
T Consensus       181 ~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~-~~~~~~~pd~~---~~sK~l~~g~~~i  256 (400)
T PTZ00125        181 AFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLA-HDHEGVKPDIV---LLGKALSGGLYPI  256 (400)
T ss_pred             EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhH-HHhcCCCCCEE---EEcccccCCCcCc
Confidence            8888888999999886 45599999999999999999999987765553211 11111111223   4689987655699


Q ss_pred             eEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          265 GWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ||+++++        ++++.+..... ...+.+++.|.++..++
T Consensus       257 g~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l  292 (400)
T PTZ00125        257 SAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEAL  292 (400)
T ss_pred             EEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHH
Confidence            9999864        46666654322 23456777877765543

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.71  E-value=7.8e-16  Score=143.25  Aligned_cols=158  Identities=20%  Similarity=0.144  Sum_probs=124.9

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~  163 (319)
                      ....|++.++++.        ..+..+++++|+.|+..++.+++++||+|++....|.+...    .+...|++++.++ 
T Consensus        70 ~~~~Le~~lA~l~--------g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-  140 (436)
T PRK07812         70 TQDVVEQRIAALE--------GGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-  140 (436)
T ss_pred             hHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence            4568888888887        34557888889999999999999999999999988876543    3345777777664 


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      +.     .|++.+++++++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|+++..-..    ..++ ..  
T Consensus       141 d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~--  205 (436)
T PRK07812        141 DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EH--  205 (436)
T ss_pred             CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hc--
Confidence            21     2899999999888999999999999999955   89999999999999999999875221    1122 11  


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEee
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                       .-.+++.|++|.++..|--+|++++.
T Consensus       206 -GaDivv~S~tK~lgg~G~~i~G~vv~  231 (436)
T PRK07812        206 -GADIVVHSATKYLGGHGTAIAGVIVD  231 (436)
T ss_pred             -CCCEEEEecccccCCCCCeEEEEEEc
Confidence             22388899999999998888888774

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.71  E-value=1.4e-15  Score=139.29  Aligned_cols=182  Identities=10%  Similarity=0.124  Sum_probs=134.6

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  162 (319)
                      +....|++.++++.        ..+..+++++++.|++.++.+++++||+|+++...|.+....    ++..|+++..++
T Consensus        62 Pt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd  133 (395)
T PRK08114         62 LTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFD  133 (395)
T ss_pred             hhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence            34567888888765        456888999999999999999999999999999999765544    467899988876


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      .       .|.+.+++++++++++|++.+|+||+|.+.+   +++|+++|+++  |+++++|+++..-..     .....
T Consensus       134 ~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~  198 (395)
T PRK08114        134 P-------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALD  198 (395)
T ss_pred             C-------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHH
Confidence            4       3778999999989999999999999999954   99999999998  499999999976221     11111


Q ss_pred             cCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHH
Q 020968          241 FGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFL  302 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~  302 (319)
                      +   +-.+++.|.+|.++.+| ...|.++. ++       +..++++.... .....++...+.
T Consensus       199 ~---GaDivv~S~tKyl~Ghsdv~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~~a~l  251 (395)
T PRK08114        199 F---GIDISIQAGTKYLVGHSDAMIGTAVA-NA-------RCWEQLRENSYLMGQMVDADTAYM  251 (395)
T ss_pred             c---CCcEEEEcCcccccCCCcceeEEEEc-CH-------HHHHHHHHHHHhccCCCCHHHHHH
Confidence            2   23499999999888876 55664443 32       34444543332 233445554444

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.71  E-value=6.9e-16  Score=141.41  Aligned_cols=193  Identities=23%  Similarity=0.348  Sum_probs=142.7

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCC
Q 020968           65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG  143 (319)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~  143 (319)
                      ++..+++.+.+.++.+..++  ....+|++.+++++        +.+.++.++++|.|+.+++.++ .++||+|+++.-+
T Consensus         5 ~e~~~~v~~~l~s~~~~~~g--~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t   74 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLSTYG--PYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT   74 (363)
T ss_dssp             HHHHHHHHHHHHHTCCSSSS--HHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred             HHHHHHHHHHHHhCCccCCC--HHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence            45566777777776543333  35689999999999        5678999999999999999998 4789999999999


Q ss_pred             CcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968          144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE  223 (319)
Q Consensus       144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~  223 (319)
                      |......+...|++++++++++ +.+.+|++.+++.+++++++|+++|.   .|..   .++.+|.++|+++|++||+|.
T Consensus        75 ~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~  147 (363)
T PF01041_consen   75 FPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA  147 (363)
T ss_dssp             -THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred             chHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence            9999999999999999999975 56799999999999999999998875   4555   569999999999999999999


Q ss_pred             CCCCccC-CCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          224 VYDHLAF-GNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       224 a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      +++.... .++   .+..+.+    +.+.||  +|.+  +.-.-|.+++.+       +++.++++.++.
T Consensus       148 a~a~g~~~~g~---~~G~~gd----~~~fSf~~~K~i--~~geGG~v~~~~-------~~~~~~~~~~~~  201 (363)
T PF01041_consen  148 AQAFGARYKGR---PVGSFGD----IAIFSFHPTKII--TTGEGGAVVTND-------PELAERARALRN  201 (363)
T ss_dssp             TTTTT-EETTE---ETTSSSS----EEEEESSTTSSS---SSS-EEEEEST-------HHHHHHHHHHTB
T ss_pred             ccccCceeCCE---eccCCCC----ceEecCCCCCCC--cCCCCeeEEecH-------HHHHHHhhhhhc
Confidence            9997542 332   2222332    667777  5774  433348888865       458888887665

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.71  E-value=1.7e-15  Score=140.44  Aligned_cols=237  Identities=15%  Similarity=0.124  Sum_probs=149.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--..+..+ -.|.+.+++.++++....  .+.. ...+....+++.+.+..    ..+.+++++++++|
T Consensus        33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~la~~L~~~~----~~~~~~f~~SGseA  104 (397)
T TIGR03246        33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWH--IGNG-YTNEPVLRLAKKLVDAT----FADKVFFCNSGAEA  104 (397)
T ss_pred             CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccc--ccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCCcHHH
Confidence            4678899988732222334 478999999998875211  1111 11233344444444322    24689999999999


Q ss_pred             HHHHHHHhc--------CCCCEEEEcCCCCcchHH-HHhhCCCe------------EEEEeccCCCCCcCCHHHHHhhhc
Q 020968          123 IEVILTVLA--------RPGANILLPRPGFPYYEA-RATHSHLE------------VRHFDLLPAKGWEVDLDAVEALAD  181 (319)
Q Consensus       123 i~~~~~~l~--------~~gd~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~  181 (319)
                      +..+++...        ....+|+..+-.|++... .....+..            +..++       ..|++.+++.+.
T Consensus       105 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~  177 (397)
T TIGR03246       105 NEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-------YNDLAAAKALIS  177 (397)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-------CCCHHHHHHHhc
Confidence            999998762        123577877777766432 22322211            11111       138899999988


Q ss_pred             cCceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC
Q 020968          182 ENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP  260 (319)
Q Consensus       182 ~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~  260 (319)
                      +++++|++..++++.|... +.+.+++|.++|+++|+++|+||+|.++...|... ....+.-... +  -+++|.++ +
T Consensus       178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD-i--~t~~K~lg-g  252 (397)
T TIGR03246       178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD-I--LTSAKALG-G  252 (397)
T ss_pred             cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC-E--EEeehhhh-C
Confidence            7777777775566667554 88999999999999999999999998875555322 1112221112 2  37899975 7


Q ss_pred             cceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          261 GWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       261 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      |+++||+++++        ++++.+.... ..+.+.+++.+.++...+
T Consensus       253 G~pigav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l  292 (397)
T TIGR03246       253 GFPIGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVL  292 (397)
T ss_pred             CcceeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHH
Confidence            99999999854        4666664332 223345677776655544

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.70  E-value=1.7e-15  Score=139.55  Aligned_cols=238  Identities=13%  Similarity=0.135  Sum_probs=157.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-.  ..++..|.+.+++.+++....  .++ .....++++.+++.+..    . ....++++++++++
T Consensus        27 dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~----~-~~~~~~~~~SGseA   96 (375)
T PRK04260         27 DGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSP-NLYLNSLQEEVAQKLIG----D-KDYLAFFCNSGAEA   96 (375)
T ss_pred             CCCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--ccc-CccCCHHHHHHHHHHhc----C-cCCEEEEcCccHHH
Confidence            36678999877321  124557889999999886532  232 23456888899987733    1 12246889999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchH-HHHhhCCCeEE---------EEeccCCCCCcCCHHHHHhhhccCceEEEEc
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYE-ARATHSHLEVR---------HFDLLPAKGWEVDLDAVEALADENTVALVII  190 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~---------~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~  190 (319)
                      +..+++...  ..+++|++.+..|++.. ..+...+.+..         .++..+    ..|++.+++.+.++..+|++.
T Consensus        97 ~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~dl~~l~~~l~~~~a~vi~e  172 (375)
T PRK04260         97 NEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FNDLNSVKALVNKNTAAVMLE  172 (375)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCCHHHHHHhcCCCeEEEEEC
Confidence            998887753  34578888888887532 23222222110         011000    138899999887777888889


Q ss_pred             CCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          191 NPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       191 ~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      .++|++|.+. +.+.++++.++|+++|+++|+||+|.++...+... ........+.   +.||||.+ .+|+|+||+++
T Consensus       173 ~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l-~~G~~ig~~~~  247 (375)
T PRK04260        173 LVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGL-ANGVPVGAMLA  247 (375)
T ss_pred             CeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEecccc-cCCcceEEEEE
Confidence            9999999865 45679999999999999999999998876554321 2112222222   33899996 47999999999


Q ss_pred             eCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          270 SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++        ++.+.+..... .+...+++.|.++...+
T Consensus       248 ~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l  278 (375)
T PRK04260        248 KS--------SLGGAFGYGSHGSTFGGNKLSMAAASATL  278 (375)
T ss_pred             cH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHH
Confidence            64        45665543222 23455788888777754

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=2.5e-15  Score=135.25  Aligned_cols=195  Identities=23%  Similarity=0.299  Sum_probs=153.2

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcC
Q 020968           63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPR  141 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~  141 (319)
                      ......+++.+.+.++.+.. ++  -..+|++++++|+        .....+.++++|.|+.++++++ .++||.|++++
T Consensus        13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps   81 (374)
T COG0399          13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS   81 (374)
T ss_pred             cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence            34677788888888876533 43  4689999999999        5678999999999999999966 58999999999


Q ss_pred             CCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968          142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA  221 (319)
Q Consensus       142 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  221 (319)
                      -+|..........|++++++++++ +.+.+|++.+|+++.+++++|+.++-   .|..   .++++|.++|++||++||+
T Consensus        82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVhl---~G~~---~dm~~i~~la~~~~l~vIE  154 (374)
T COG0399          82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVHL---AGQP---CDMDAIMALAKRHGLPVIE  154 (374)
T ss_pred             CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEehh---ccCC---CCHHHHHHHHHHcCCeEEE
Confidence            999999999999999999999976 45689999999999999999998875   2333   4689999999999999999


Q ss_pred             eCCCCCcc-CCCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          222 DEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       222 D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                      |.+++... +.|+.   +..+.+    +-+.||  +|.+.. | --|.++..+       +++.++++.++..
T Consensus       155 DaAqa~Ga~y~gk~---vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd-------~ela~k~~~lr~h  211 (374)
T COG0399         155 DAAQAHGATYKGKK---VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTND-------EELAEKARSLRNH  211 (374)
T ss_pred             EcchhccCeecCcc---cccccc----eEEEEecCCCCccc-c-CceEEEeCC-------HHHHHHHHHHHHh
Confidence            99998643 34433   223332    444555  566433 3 558888765       4688888876653

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.70  E-value=1.2e-15  Score=142.72  Aligned_cols=247  Identities=14%  Similarity=0.123  Sum_probs=152.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|....... --+|.+.+++.+++..... .+.+..+.+. ...+++++....+... .+.+++++++++|
T Consensus        39 dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~~~-~~~~~~~~~~-~~~la~~l~~~~~~~~-~~~~~f~~sGsea  114 (425)
T PRK08088         39 EGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSH-TCFQVLAYEP-YLELCEKMNQKVPGDF-AKKTLLVTTGSEA  114 (425)
T ss_pred             CCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhCCC-ccccccCCHH-HHHHHHHHHHhCCCCC-CCEEEEeCCcHHH
Confidence            366788887775432111 2378888999998876432 2222222333 3467777766444322 2467777777787


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEE--------------E--EeccCCCCCcC--CHHHHHhhhc-
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVR--------------H--FDLLPAKGWEV--DLDAVEALAD-  181 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~--------------~--~~~~~~~~~~~--d~~~l~~~l~-  181 (319)
                      +..+++...  ....+|+..+++|++....+...+....              .  ++.. ..+...  +++.+++.+. 
T Consensus       115 ~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~l~~  193 (425)
T PRK08088        115 VENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCP-LHGVSEDDAIASIERIFKN  193 (425)
T ss_pred             HHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcc-ccCccHHHHHHHHHHHHHh
Confidence            777766542  1235677779999886554444332111              0  1110 011111  1456777764 


Q ss_pred             ----cCceEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          182 ----ENTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       182 ----~~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                          ++..++++... +++.+...+.+.+++|.++|+++|+++|+||+|.++.+.+.. ..+...   +.+..+.||||.
T Consensus       194 ~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~~~---~~~pdi~s~sK~  269 (425)
T PRK08088        194 DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAMEQM---GVAADLTTFAKS  269 (425)
T ss_pred             ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHhhc---CCCCCEEEEecc
Confidence                23344444432 677777889999999999999999999999999987654421 111111   223447899999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++ +|+|+||++++.        ++++.+..... .+...+++.|.++...+
T Consensus       270 l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l  312 (425)
T PRK08088        270 IA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVL  312 (425)
T ss_pred             cc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHH
Confidence            75 999999999864        46776654433 34567889998888854

>PRK04311 selenocysteine synthase; Provisional

Probab=99.70  E-value=6.2e-15  Score=137.82  Aligned_cols=200  Identities=17%  Similarity=0.155  Sum_probs=140.1

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCC---cC--CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSST---VG--ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA  135 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd  135 (319)
                      .+.++.+.+++.+.+.......|.-.   .|  +..+++.+++++        +.+..+++++++.|+.+++.++ .+||
T Consensus        96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd  166 (464)
T PRK04311         96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK  166 (464)
T ss_pred             CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence            46789999999888765422222211   11  357788888877        3456888899999999988665 7999


Q ss_pred             EEEEcCCCCcc------hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc--cc--cccCHHHH
Q 020968          136 NILLPRPGFPY------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP--CG--NVYTYQHL  205 (319)
Q Consensus       136 ~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np--tG--~~~~~~~l  205 (319)
                      +|+++...+..      ....++..|++++.++...    ..++++++++++++++++++++++||  +|  ..   .++
T Consensus       167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~---~dl  239 (464)
T PRK04311        167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKE---VSL  239 (464)
T ss_pred             EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCc---CCH
Confidence            99998764431      2345678899998887532    24789999999999999999999998  34  34   359


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCcc----CCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLA----FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      ++|+++|+++|+++++|.+.+.+.    ++-...+.+......+-.++++|.+|.++.|  ..|++++.+        ++
T Consensus       240 ~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~l  309 (464)
T PRK04311        240 AELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------EL  309 (464)
T ss_pred             HHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcH--------HH
Confidence            999999999999999999755432    1100111222211123349999999997666  589888743        46


Q ss_pred             HHHHH
Q 020968          282 VDSIK  286 (319)
Q Consensus       282 ~~~~~  286 (319)
                      +++++
T Consensus       310 i~~l~  314 (464)
T PRK04311        310 IARLK  314 (464)
T ss_pred             HHHHh
Confidence            66665

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.70  E-value=2.6e-15  Score=137.33  Aligned_cols=184  Identities=24%  Similarity=0.293  Sum_probs=132.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~  163 (319)
                      ....|++.++++.        ..+.++++++|+.|+..++.+++++||+|+++...|.+....+    ...|+++..++.
T Consensus        56 t~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~  127 (386)
T PF01053_consen   56 TVRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP  127 (386)
T ss_dssp             HHHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred             cHHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence            3467777887776        3578999999999999999999999999999999998765544    457999887764


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcC-CEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG-IMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                             -|++++++++++++++|++..|.||+..+   .++++|+++|+++| +++++|+++.....-    .++ .+.
T Consensus       128 -------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~----~pL-~~G  192 (386)
T PF01053_consen  128 -------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYNQ----NPL-ELG  192 (386)
T ss_dssp             -------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-----GG-GGT
T ss_pred             -------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceeee----ccC-cCC
Confidence                   38999999999999999999999999888   56999999999998 999999999863211    122 122


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL  302 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~  302 (319)
                         -.|++.|.+|.++..|--+|-+++.+.     .+++.++++..... ....++...+.
T Consensus       193 ---aDivv~S~TKyl~Ghsdv~~G~vv~~~-----~~~~~~~l~~~~~~~G~~~~p~da~l  245 (386)
T PF01053_consen  193 ---ADIVVHSATKYLSGHSDVMGGAVVVNG-----SSELYDRLREFRRLLGATLSPFDAWL  245 (386)
T ss_dssp             ----SEEEEETTTTTTTSSSE-EEEEEESS-----HHHHHHHHHHHHHHHT-B--HHHHHH
T ss_pred             ---ceEEEeeccccccCCcceeeEEEEECc-----hhhhhhhhcchhhhcCccchHHHHHH
Confidence               239999999998877666555554332     13577777665543 33344444443

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.69  E-value=4.7e-15  Score=137.33  Aligned_cols=202  Identities=14%  Similarity=0.166  Sum_probs=137.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH-HHHHHHHHHhcC---CCCEEEEcCCCCcchHHHHhhCCCeEEEEec-c
Q 020968           90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCT-QAIEVILTVLAR---PGANILLPRPGFPYYEARATHSHLEVRHFDL-L  164 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t-~ai~~~~~~l~~---~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~  164 (319)
                      ..+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++..   +|+.|+++.-+|.+..+.+...|++++.++. .
T Consensus       104 ~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~  182 (444)
T TIGR03531       104 YKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVL  182 (444)
T ss_pred             HHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeee
Confidence            444455555444444432 124688999999 688888877652   5899999999999999999999999999996 3


Q ss_pred             CCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCC--c
Q 020968          165 PAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM--G  239 (319)
Q Consensus       165 ~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~  239 (319)
                      ++++|.+|++++++++++   +..++++.+|+  |+......++++|.++|+++|+++|+|++|+.....   ...+  .
T Consensus       183 d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~---~~~~~~~  257 (444)
T TIGR03531       183 DGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK---YMELINK  257 (444)
T ss_pred             cCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh---hhhhhhc
Confidence            456789999999999975   44566666665  343334488999999999999999999999963211   0011  1


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEE-eeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ......-.+++.|++|.+.+||+  |+++ +.+       +++.+++...... ...+.+.|.+...++
T Consensus       258 g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll  316 (444)
T TIGR03531       258 AIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLL  316 (444)
T ss_pred             cccccCCCeEEEeCccCCCCCCC--EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHH
Confidence            11110114778899999988876  6655 434       3577766654321 223456666655533

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>TIGR01814 kynureninase kynureninase

Probab=99.66  E-value=5.8e-15  Score=137.40  Aligned_cols=196  Identities=15%  Similarity=0.176  Sum_probs=134.9

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC---C-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR---F-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~---~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      ++++.|+++.-+     ++|+.+.+++.+.+....   . ..+....+...+.+.+.+ + +..  +.++++|++++|+|
T Consensus        26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~--g~~~~~v~~~~~~t   96 (406)
T TIGR01814        26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLV--GAKEDEVVVMNTLT   96 (406)
T ss_pred             CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-ccc--CCCCCcEEEeCCch
Confidence            678999988844     447888888877654311   0 111100121222222222 1 223  35788999999999


Q ss_pred             HHHHHHHHHhcCCC---CEEEEcCCCCcch----HHHHhhCCCeE----EEEeccCCCCCcCCHHHHHhhhc---cCceE
Q 020968          121 QAIEVILTVLARPG---ANILLPRPGFPYY----EARATHSHLEV----RHFDLLPAKGWEVDLDAVEALAD---ENTVA  186 (319)
Q Consensus       121 ~ai~~~~~~l~~~g---d~Vl~~~p~~~~~----~~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~~l~---~~~~~  186 (319)
                      ++++.++.++.++|   +.|++....|+..    ...++..|+++    +.++.  ..++.+|++.+++.++   +++++
T Consensus        97 ~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t~l  174 (406)
T TIGR01814        97 INLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDIAV  174 (406)
T ss_pred             HHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCeEE
Confidence            99999999986554   3688888999763    23446678876    34443  3345678999988773   67889


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC-CCc
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPG  261 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G  261 (319)
                      |++++++|.||.+.+   +++|.++|+++|+++++|++++.    |..+..+....   -.+++.|.+|+++ .||
T Consensus       175 v~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~g---vD~~~~s~hK~l~g~pG  240 (406)
T TIGR01814       175 ILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWG---VDFACWCTYKYLNAGPG  240 (406)
T ss_pred             EEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccCC---CCEEEEcCccccCCCCC
Confidence            999999999999976   89999999999999999999987    33333333332   2489999999864 455

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.66  E-value=2.5e-14  Score=133.45  Aligned_cols=193  Identities=15%  Similarity=0.088  Sum_probs=135.1

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCC-----cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSST-----VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA  135 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd  135 (319)
                      .+.++.+.+++.+.+.......|.-.     .-+..+++.+++++        +.+..+++++++.|+.+++.+ +.+||
T Consensus        91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~--------gae~alvv~sg~aAi~l~l~~-l~~Gd  161 (454)
T TIGR00474        91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT--------GAEDALVVNNNAAAVLLALNT-LAKGK  161 (454)
T ss_pred             CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHH-hCCcC
Confidence            36689999999888765322123211     11367888888887        234467788888999988855 57999


Q ss_pred             EEEEcCCCCcc------hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc--cc--ccCHHHH
Q 020968          136 NILLPRPGFPY------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC--GN--VYTYQHL  205 (319)
Q Consensus       136 ~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt--G~--~~~~~~l  205 (319)
                      +|+++...|..      +...++..|++++.++.+.    ..++++++++++++++++++.+++|++  |.  +   .++
T Consensus       162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~---~dl  234 (454)
T TIGR00474       162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEE---VSI  234 (454)
T ss_pred             EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCC---CCH
Confidence            99999876532      2345677899998887532    247899999999999999999999985  53  4   349


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCC---C-CCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGN---T-PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~---~-~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ++|+++|+++|+++++|.+.+.+...+   - ..+.+......+-.++++|.+|+++.|  ..|++++.+
T Consensus       235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~  302 (454)
T TIGR00474       235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK  302 (454)
T ss_pred             HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH
Confidence            999999999999999998755432110   0 111112222222349999999997666  479888753

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.66  E-value=9.1e-17  Score=139.47  Aligned_cols=224  Identities=16%  Similarity=0.148  Sum_probs=135.5

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHH----hhcCCCCCCCC-----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHS----VRSARFNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      +|+++|||..+      +.........    +.....+.|..     ..-.++|.+.|.++.....|...+...|++++|
T Consensus         1 ~d~d~GDP~~~------E~yW~~~~~~~avvi~gw~rMSY~~~~~~~~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtG   74 (363)
T PF04864_consen    1 ADADSGDPTFF------EPYWRRHGDSSAVVIPGWHRMSYFSDSSNGWFISPELERQIRRLHRVVGNAVTDGRYIVFGTG   74 (363)
T ss_dssp             EEESS---GGG------HHHHCCTHHHH-EEE-TTTT-SSSS-TTSSTTS-HHHHHHHHHHHHHH-SB--TTSEEEEECH
T ss_pred             CCcCCCCchhh------HHHHHhcCcceeEEEeccccceeEEecCCceeccHHHHHHHHHHHHHhccccccCcEEEEcCC
Confidence            57889998742      2222211111    12223345544     123579999999999888888888889999999


Q ss_pred             HHHHHHHHHHHhcCC----C--CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          119 CTQAIEVILTVLARP----G--ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~----g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      +|+.+++++.+|...    +  -+|+...|.|+.|........-....+.-+. ..|.       ..-...+-+-++++|
T Consensus        75 sTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda-~~~~-------~~~~~~~~IElVTSP  146 (363)
T PF04864_consen   75 STQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDA-SNFK-------NSDNPSPYIELVTSP  146 (363)
T ss_dssp             HHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEEC-CCGT-------T-S-CCGEEEEEESS
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccccH-Hhhc-------cCCCCCCeEEEEeCC
Confidence            999999999999533    1  4889999999999988776655444444332 1221       111124566789999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      |||.|.+     .+.++   +..+..+|.|-+|.+=.|+     ++....  +..|.++++||.-|-+|-|+||.++.|+
T Consensus       147 NNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyT-----pI~~~a--D~DiMLFT~SK~TGHAGSR~GWAlVKD~  211 (363)
T PF04864_consen  147 NNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYT-----PITAPA--DHDIMLFTLSKLTGHAGSRFGWALVKDE  211 (363)
T ss_dssp             -TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-B----SEEEEEHHHHCS-GGG-EEEEEES-H
T ss_pred             CCCcccc-----cchhc---CCCCcceeeeeeeeccccc-----ccCCCC--CCceEEEEEecccCccccccceeeecCH
Confidence            9999998     55554   4456778999999984433     333322  3349999999999999999999999874


Q ss_pred             CCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          273 NGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                             ++.++|..+..+ +.++|.-+|..+++++
T Consensus       212 -------~Va~kM~~y~~lnTiGvS~dsQLRa~kiL  240 (363)
T PF04864_consen  212 -------EVAKKMTKYMELNTIGVSRDSQLRALKIL  240 (363)
T ss_dssp             -------HHHHHHHHHHHHHCSS--HHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence                   588999998875 7899999999998854

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.66  E-value=4.2e-15  Score=138.95  Aligned_cols=241  Identities=15%  Similarity=0.092  Sum_probs=152.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ++..++||..|.+..+-. ..+|.+.+++.+++.... ..|.+..+..+|.+.+++.+    .   ..+.+++++++++|
T Consensus        48 dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGseA  118 (426)
T PRK00062         48 DGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTEA  118 (426)
T ss_pred             CCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHHH
Confidence            477899999886543222 367899999999987643 23444444445555555543    1   35689999999999


Q ss_pred             HHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhC-CCe-------E---EEEeccCCCCC---cCCHHHHHhhhcc---C
Q 020968          123 IEVILTVLAR--PGANILLPRPGFPYYEARATHS-HLE-------V---RHFDLLPAKGW---EVDLDAVEALADE---N  183 (319)
Q Consensus       123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~~-------~---~~~~~~~~~~~---~~d~~~l~~~l~~---~  183 (319)
                      +..+++....  .+++|+..++.|+++...+... |..       .   ...+.. ...+   ..|++.+++.+..   +
T Consensus       119 ~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~~  197 (426)
T PRK00062        119 TMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA-KHTLTAPYNDLEAVEELFEEYGDE  197 (426)
T ss_pred             HHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc-cceEEcCCCCHHHHHHHHHhCCCc
Confidence            9999987543  3578999999998865322211 100       0   000000 0000   1378888887742   4


Q ss_pred             ceEEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968          184 TVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW  262 (319)
Q Consensus       184 ~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~  262 (319)
                      +.+|++......+|.+.+ .+.+++|.++|++||+++|+||+|.++.+++ . .....+.-.+.   +.+++|.++ .|+
T Consensus       198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~-~~~~~~~~~pD---i~~~gK~l~-~G~  271 (426)
T PRK00062        198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-G-GAQGYYGVTPD---LTTLGKIIG-GGL  271 (426)
T ss_pred             EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-c-cHHHHhCCCcc---hHhhhhHhh-CCC
Confidence            556666634445787775 7779999999999999999999999874332 1 11111211111   358899986 789


Q ss_pred             eeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          263 RLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       263 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++|+++++.        ++++.+...    ...+.+.+++.+.++..++
T Consensus       272 p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L  312 (426)
T PRK00062        272 PVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATL  312 (426)
T ss_pred             cceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHH
Confidence            999998753        466666421    1123456778877766654

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.65  E-value=1.2e-14  Score=130.08  Aligned_cols=184  Identities=21%  Similarity=0.171  Sum_probs=144.2

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~  163 (319)
                      ....+.+.+++..        ...+.++.+++..|+..++..++..|++|++....|......+    ...|++...++.
T Consensus        78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~  149 (409)
T KOG0053|consen   78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV  149 (409)
T ss_pred             chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence            4567777777776        4556899999999999999999999999999999998765444    467777777765


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      +       +++++++++++++++|++.+|.||+..+   .+++++.++|+++|+++++|++++...+-  .+.+   +. 
T Consensus       150 ~-------~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~~--~pL~---lG-  213 (409)
T KOG0053|consen  150 D-------DLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYNQ--DPLP---LG-  213 (409)
T ss_pred             h-------hHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccccc--Chhh---cC-
Confidence            3       7788899999899999999999999999   56999999999999999999999975321  1112   22 


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHH
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLK  303 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~  303 (319)
                        -.|++.|.+|.++..+--+|-+++.+      .+++.++++..+. +.+..+++....+
T Consensus       214 --ADIV~hSaTKyi~Ghsdvi~G~iv~n------~~~~~~~l~~~~~~lg~~~~p~~~~ll  266 (409)
T KOG0053|consen  214 --ADIVVHSATKYIGGHSDVIGGSVVLN------SEELASRLKFLQEDLGWCEDPFDLFLL  266 (409)
T ss_pred             --CCEEEEeeeeeecCCcceeeeEEecC------cHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence              23999999999999877777766654      2468888887775 4556666655443

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.65  E-value=2.5e-14  Score=131.06  Aligned_cols=202  Identities=16%  Similarity=0.139  Sum_probs=145.9

Q ss_pred             HHHHHH-HHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 020968           65 SVAVDA-IVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPG  143 (319)
Q Consensus        65 ~~~~~a-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~  143 (319)
                      .++.++ +......+.  .|..++.+.+|++++++++        ..+.++.+++++.|++++....+++||.|  +.+.
T Consensus        50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~  117 (450)
T TIGR02618        50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM  117 (450)
T ss_pred             HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence            566666 666655554  4888888999999999999        56789999999999998877778999977  6677


Q ss_pred             Ccc-hHHHHhhCCCeEEEEecc--------CCCCCcCCHHHHHhhhcc----CceEEEEcCCCCc-cccccCHHHHHHHH
Q 020968          144 FPY-YEARATHSHLEVRHFDLL--------PAKGWEVDLDAVEALADE----NTVALVIINPGNP-CGNVYTYQHLQKIA  209 (319)
Q Consensus       144 ~~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~np-tG~~~~~~~l~~i~  209 (319)
                      |.. +.......|..++.+..+        ....+.+|++++++++++    +++++++.+++|- .|.++|.++++++.
T Consensus       118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~  197 (450)
T TIGR02618       118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR  197 (450)
T ss_pred             eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence            744 444467788865555333        123468899999999875    3457888888875 58999999999999


Q ss_pred             HHHHHcCCEEEEeCCCCC-c-cC-----CCCCCCCC----cccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCcc
Q 020968          210 ETAKKLGIMVIADEVYDH-L-AF-----GNTPFVPM----GVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQ  277 (319)
Q Consensus       210 ~~~~~~~~~li~D~a~~~-~-~~-----~~~~~~~~----~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~  277 (319)
                      ++|+++|+.+++|.+... . .+     .+....++    ..+... -..+..|..|.+++| |   |+++..+      
T Consensus       198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~-aD~~~~S~~Kd~~~~~G---G~l~~~d------  267 (450)
T TIGR02618       198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY-ADGCTMSGKKDCLVNIG---GFLCMND------  267 (450)
T ss_pred             HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc-CcEEEEeeccCCCCCCc---eEEEeCC------
Confidence            999999999999998875 1 11     01111122    111111 125888999998777 4   6666555      


Q ss_pred             chHHHHHHHHhh
Q 020968          278 DSGIVDSIKSFL  289 (319)
Q Consensus       278 ~~~~~~~~~~~~  289 (319)
                       +++.++++..+
T Consensus       268 -~~l~~k~r~~~  278 (450)
T TIGR02618       268 -DEMFQSAKELV  278 (450)
T ss_pred             -HHHHHHHHHHh
Confidence             35888887764

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.65  E-value=9.6e-15  Score=136.05  Aligned_cols=158  Identities=20%  Similarity=0.205  Sum_probs=122.1

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  163 (319)
                      ....+++.++++++        .+..+++++++.|+.+++.++.++||+|+++...|.+..    ..+...|+++..++ 
T Consensus        70 t~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-  140 (437)
T PRK05613         70 TVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-  140 (437)
T ss_pred             HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence            35677888888772        245566666668888888888899999999999998753    44577899988887 


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      ++     .|++.+++++++++++|++.++.||+|.+.+   +++|.++|+++|+++|+|.++.....    ..++ .+. 
T Consensus       141 ~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~G-  206 (437)
T PRK05613        141 NP-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-ELG-  206 (437)
T ss_pred             CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc----cChH-HhC-
Confidence            22     2889999999989999999999999998855   99999999999999999999865221    1111 122 


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEee
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                        -.+++.|++|.++..|..+|.+++.
T Consensus       207 --aDivv~S~~K~l~G~gd~~gG~vv~  231 (437)
T PRK05613        207 --ADVVVASLTKFYTGNGSGLGGVLID  231 (437)
T ss_pred             --CCEEEeeccceecCCCcceeEEEEe
Confidence              2499999999988888777776663

>PLN00144 acetylornithine transaminase

Probab=99.64  E-value=1.4e-14  Score=133.49  Aligned_cols=253  Identities=15%  Similarity=0.115  Sum_probs=154.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--...- ---.|.+.+++.+++.....  +.. ....+....+++.+.+..    ..+.+++++++++|
T Consensus        13 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA   84 (382)
T PLN00144         13 EGKEYLDMAAGIAVNAL-GHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTEA   84 (382)
T ss_pred             CCCEEEECCcCHHhccC-CCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHH
Confidence            46778888766311101 12358899999998875321  111 122344455666665422    24689999999999


Q ss_pred             HHHHHHHhc---C-C-----------CCEEEEcCCCCcchHHHHhhCCCeE-E---EEeccCCCCC--cCCHHHHHhhhc
Q 020968          123 IEVILTVLA---R-P-----------GANILLPRPGFPYYEARATHSHLEV-R---HFDLLPAKGW--EVDLDAVEALAD  181 (319)
Q Consensus       123 i~~~~~~l~---~-~-----------gd~Vl~~~p~~~~~~~~~~~~g~~~-~---~~~~~~~~~~--~~d~~~l~~~l~  181 (319)
                      +..+++...   . .           ..+|+....+|++....+....-.. .   ..+..+.-.+  -.|++.+++.+.
T Consensus        85 ~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~  164 (382)
T PLN00144         85 NEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQ  164 (382)
T ss_pred             HHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcC
Confidence            999988542   1 0           2578888888877543333221110 0   0000000000  127889988875


Q ss_pred             c-CceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCccccC
Q 020968          182 E-NTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       182 ~-~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK~~~  258 (319)
                      . ++++|++.-.+||.|.. .+..-++++.++|+++|+++|+||+|.++...+..+.. ...+.++     +.+|||.+ 
T Consensus       165 ~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l-  238 (382)
T PLN00144        165 KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL-  238 (382)
T ss_pred             CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc-
Confidence            4 45555555447884443 23444999999999999999999999998776643221 3333332     66899995 


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHH--Hhccccccccc
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSR--KLKRNSFLKSL  317 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~--l~~~~~~~~~l  317 (319)
                      .+|+|+||++++.        ++.+.+... ...+...+++.+.++...  +++++++.+++
T Consensus       239 ~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~  292 (382)
T PLN00144        239 AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASV  292 (382)
T ss_pred             cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHH
Confidence            6899999999964        466655432 223456788888877733  34555555543

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.64  E-value=4.3e-14  Score=131.12  Aligned_cols=245  Identities=15%  Similarity=0.115  Sum_probs=155.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-.... ---.|.+.+++.+++....  .++.. ...+....+++.+....+   ..+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA  110 (408)
T PRK04612         38 QGREYLDLAAGIAVCGL-GHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTEA  110 (408)
T ss_pred             CCCEEEEcCccHhhccC-CCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHHH
Confidence            46778888777422111 1346888899998887532  22221 223444556666654322   13689999999999


Q ss_pred             HHHHHHHhcC----C-----CCEEEEcCCCCcchHHHHh-hCCCeEEE--EeccCCC-C--CcCCHHHHHhhhccCceEE
Q 020968          123 IEVILTVLAR----P-----GANILLPRPGFPYYEARAT-HSHLEVRH--FDLLPAK-G--WEVDLDAVEALADENTVAL  187 (319)
Q Consensus       123 i~~~~~~l~~----~-----gd~Vl~~~p~~~~~~~~~~-~~g~~~~~--~~~~~~~-~--~~~d~~~l~~~l~~~~~~v  187 (319)
                      +..+++....    .     ..+|+....+|++....+. ..+.....  +...+.+ .  --.|++.+++.+..+..++
T Consensus       111 ~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aa  190 (408)
T PRK04612        111 NEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAA  190 (408)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEE
Confidence            9999876431    1     2468888888877543332 22211100  0000000 0  0127888888887666777


Q ss_pred             EEcCCCCccccccC--HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968          188 VIINPGNPCGNVYT--YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       188 ~l~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      ++..|.+++|-+++  .+.++++.++|+++|+++|+||+|.++...+...    .....+.+..+.+++|.++ +|+|+|
T Consensus       191 vi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~----a~~~~~~~pdi~t~~K~l~-~G~pig  265 (408)
T PRK04612        191 VMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF----AHWQEQVTPDIVTLAKALG-GGFPIG  265 (408)
T ss_pred             EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh----hhhhcCCCCCEEEEcchhc-CCCceE
Confidence            88888887775554  5689999999999999999999999876655321    1112233466789999975 899999


Q ss_pred             EEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          266 WLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       266 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      |+++++        ++.+.+.... ..+.+.+++.+.++...+
T Consensus       266 a~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L  300 (408)
T PRK04612        266 AMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVAL  300 (408)
T ss_pred             EEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHH
Confidence            999853        3555554322 233456788888877755

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.63  E-value=7.1e-15  Score=128.67  Aligned_cols=214  Identities=16%  Similarity=0.171  Sum_probs=152.0

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL  127 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~  127 (319)
                      ++|.+.+.     ..+.|++.+++.+.-.. ....|+.++....+.+.+++.+        ....+++++++|+++.+++
T Consensus         2 ~~f~SDn~-----~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~--------g~~a~~Fv~sGT~aN~lal   67 (342)
T COG2008           2 IDFRSDNV-----AGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELF--------GKEAALFVPSGTQANQLAL   67 (342)
T ss_pred             CccccCcc-----CCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHh--------CCceEEEecCccHHHHHHH
Confidence            34555543     37789999999887532 2346888777777777777776        3488999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCCcchH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccc
Q 020968          128 TVLARPGANILLPRPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV  199 (319)
Q Consensus       128 ~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~  199 (319)
                      .+.+++|+.|++..-.|....  ......+ ...++++.+..+..+++++++..+..      .++++++.+.+|..|.+
T Consensus        68 ~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV  146 (342)
T COG2008          68 AAHCQPGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV  146 (342)
T ss_pred             HHhcCCCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence            999999999999988885421  2223333 12334444555668999999997652      34566666666688999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCc--cCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCcc
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHL--AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ  277 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~--~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  277 (319)
                      ||.+++++|.++|+++|+.|.+|.+-...  ...+   ++...+...- .++..++||..+.|+   |.|++.|.     
T Consensus       147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~-D~v~~~~tK~g~~~~---gAiv~gn~-----  214 (342)
T COG2008         147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKSYV-DSVSFCLTKGGGAPV---GAIVFGNR-----  214 (342)
T ss_pred             cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHhhC-CEEEEecccCCccee---eeEEEcCH-----
Confidence            99999999999999999999999975542  2223   2333333222 266668999966664   99988764     


Q ss_pred             chHHHHHHHHhhh
Q 020968          278 DSGIVDSIKSFLN  290 (319)
Q Consensus       278 ~~~~~~~~~~~~~  290 (319)
                        +++++++..+-
T Consensus       215 --~~~~~a~~~rK  225 (342)
T COG2008         215 --DFAKRARRWRK  225 (342)
T ss_pred             --HHHHHHHHHHH
Confidence              48887776554

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.63  E-value=4.7e-15  Score=135.29  Aligned_cols=192  Identities=17%  Similarity=0.214  Sum_probs=129.9

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      |..-+.+..+..|+.+..       .+..++++|+|.++..++.+++++||+|+++..+|.+....+...|+.+++++..
T Consensus        64 p~G~I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~  136 (417)
T PF01276_consen   64 PEGIIKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE  136 (417)
T ss_dssp             TBTHHHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE
T ss_pred             CccHHHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC
Confidence            443456777778888732       4567889999999999999999999999999999999888999999999988875


Q ss_pred             CCCCC----cCCH-----HHHHhhhcc--Cc---eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc-c
Q 020968          165 PAKGW----EVDL-----DAVEALADE--NT---VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL-A  229 (319)
Q Consensus       165 ~~~~~----~~d~-----~~l~~~l~~--~~---~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~-~  229 (319)
                       .+.+    .+++     +.++++++.  ..   +++++++|+. .|++++   +++|+++|+++++.|++||||+.. .
T Consensus       137 -~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~  211 (417)
T PF01276_consen  137 -DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFG  211 (417)
T ss_dssp             -E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGG
T ss_pred             -ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEcccccccc
Confidence             3332    3455     888888864  22   3489999874 689855   999999999999999999999964 3


Q ss_pred             CCCCCCCCCcccC----CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          230 FGNTPFVPMGVFG----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       230 ~~~~~~~~~~~~~----~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                      |.. -+.+.....    .+..++++.|.+|+  ++++.-+.++.-+.+......++.+.+..++++
T Consensus       212 F~~-lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~v~~~~~~~~l~~~~TT  274 (417)
T PF01276_consen  212 FHP-LPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRIVDHERVNEALSMHQTT  274 (417)
T ss_dssp             CSG-GGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-S
T ss_pred             CCC-CccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCcccHHHHHHHHHHHcCC
Confidence            432 111111111    22457999999999  566666665544333213334455555555544

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.62  E-value=1.4e-13  Score=128.84  Aligned_cols=247  Identities=14%  Similarity=0.110  Sum_probs=149.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ++..++||..|--...- ---.|.+.+++.+++.....  +.......+.+..+++.+.+..+  ...+.+++++++++|
T Consensus        39 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsEA  113 (443)
T PRK08360         39 EGNEYIDFLSDAAVQNV-GHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSDA  113 (443)
T ss_pred             CCCEEEEccccHhhccc-CCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHHH
Confidence            46778888777322111 13468899999998876322  22211223445556666655332  123689999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchH-HHHhhCCC------------eEEEEeccCCCC--Cc--------CCHHHHH
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYE-ARATHSHL------------EVRHFDLLPAKG--WE--------VDLDAVE  177 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~~~~--~~--------~d~~~l~  177 (319)
                      +..+++...  ....+|+.....|++.. ......+.            .+..++......  +.        .+.+.++
T Consensus       114 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (443)
T PRK08360        114 NDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIK  193 (443)
T ss_pred             HHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHH
Confidence            999988643  22357777777776643 22221221            122222211000  10        1234455


Q ss_pred             hhhc-----cCceEEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          178 ALAD-----ENTVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       178 ~~l~-----~~~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      +.+.     +++++|++.-..||+|.+++ .+.++++.++|+++|+++|+||+|.++.+.+..+ ....+...+.++   
T Consensus       194 ~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii---  269 (443)
T PRK08360        194 EKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII---  269 (443)
T ss_pred             HHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE---
Confidence            5553     34566666544799999887 5569999999999999999999999987666422 222222223333   


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      ++||.++ +|+|+||++++.        ++++.+.... ..+.+.+++.|.++..++
T Consensus       270 tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l  317 (443)
T PRK08360        270 TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVI  317 (443)
T ss_pred             Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHH
Confidence            6799986 899999999853        4666665432 234456777777766654

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.62  E-value=4.4e-14  Score=131.30  Aligned_cols=237  Identities=13%  Similarity=0.078  Sum_probs=147.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..++||..|.... ..--..|.+.+++.+.++..... .........++.+.+++++        ..+.+++++++++
T Consensus        35 ~g~~~lD~~s~~~~~-~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~  105 (401)
T TIGR01885        35 EGKRYLDFLSAYSAV-NQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGAE  105 (401)
T ss_pred             CCCEEEEcccCHhhc-cCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccHH
Confidence            366788888764221 00123689999999887653211 1001122344555555544        2468999999999


Q ss_pred             HHHHHHHHhc---------CC-CCEEEEcCCCCcch-HHHHhhCCC------------eEEEEeccCCCCCcCCHHHHHh
Q 020968          122 AIEVILTVLA---------RP-GANILLPRPGFPYY-EARATHSHL------------EVRHFDLLPAKGWEVDLDAVEA  178 (319)
Q Consensus       122 ai~~~~~~l~---------~~-gd~Vl~~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~  178 (319)
                      |+..+++...         .+ .++|+...-+|... .......+.            .+..++.       .|++.+++
T Consensus       106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~  178 (401)
T TIGR01885       106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE  178 (401)
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence            9999998752         12 36777777787653 333332221            1122211       27888888


Q ss_pred             hhc---cCceEEEEcCCCCccccccCHH-HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          179 LAD---ENTVALVIINPGNPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       179 ~l~---~~~~~v~l~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                      .++   ++..+|++..+.+++|.+.+.+ .+++|.++|+++|+++|+||+|.++.+.|... ......-.+.++   +++
T Consensus       179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g  254 (401)
T TIGR01885       179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG  254 (401)
T ss_pred             HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence            775   3456777777799999988644 59999999999999999999998776555322 111111112233   367


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  307 (319)
                      |.++.+++|+|+++++.        ++++.++.. ...+.+.+++.|.++..++
T Consensus       255 K~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L  300 (401)
T TIGR01885       255 KALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAAL  300 (401)
T ss_pred             ccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence            99987779999999853        466666532 2223345677777766654

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.62  E-value=7e-14  Score=126.68  Aligned_cols=185  Identities=21%  Similarity=0.206  Sum_probs=136.6

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHF  161 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~  161 (319)
                      .+....|.+.++++-        ..++.+.++++..||..++.+++++||+|+++...|.+..    .+.+..|+++.++
T Consensus        62 nPT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~  133 (396)
T COG0626          62 NPTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV  133 (396)
T ss_pred             CccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence            345678888888887        5678999999999999999999999999999999997643    4456788888877


Q ss_pred             eccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          162 DLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      +.       .+.+.+++++. +++++|++..|.||+..+   .++.+|+++|+++|+++++|++|..-.+..    ++ .
T Consensus       134 d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~----PL-~  198 (396)
T COG0626         134 DP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQR----PL-E  198 (396)
T ss_pred             CC-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccC----hh-h
Confidence            64       25556666666 589999999999999999   569999999999999999999999744321    11 1


Q ss_pred             cCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh--hcCCcchHHHHH
Q 020968          241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQFL  302 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~  302 (319)
                      +   +-.|++.|.+|.++..+--+|-++..+.      +++.+.+.....  +....+++..+.
T Consensus       199 ~---GaDIVvhSaTKyl~GHsDvl~G~v~~~~------~~~~~~~~~~~~~~~G~~l~p~dA~l  253 (396)
T COG0626         199 L---GADIVVHSATKYLGGHSDVLGGVVLTPN------EELYELLFFAQRANTGAVLSPFDAWL  253 (396)
T ss_pred             c---CCCEEEEeccccccCCcceeeeEEecCh------HHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence            2   2349999999999987666666554322      245555533222  333445555544

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.61  E-value=1.9e-15  Score=133.17  Aligned_cols=190  Identities=16%  Similarity=0.156  Sum_probs=139.8

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 020968           63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP  142 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p  142 (319)
                      +.|++.+++.+....+.  .|+.+....+|++.+++.+        ..+..++++++|.+..+++++++++++.|++..+
T Consensus         7 ~~~~m~~a~~~a~~gd~--~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~   76 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGDD--AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT   76 (290)
T ss_dssp             S-HHEEHHHHHTTSB-C--CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred             CCHHHHHHHHccccCCc--ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence            56888899966655444  5999888999999999999        4567789999999999999999999999999998


Q ss_pred             CCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcc-ccccCHHHHHHHHHHH
Q 020968          143 GFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPC-GNVYTYQHLQKIAETA  212 (319)
Q Consensus       143 ~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~  212 (319)
                      .|..   ........|.+++.++...  +..+++++|++.+..      .+++|+|++|+|-. |.++|.+++++|.++|
T Consensus        77 aHi~~~E~ga~~~~~G~~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a  154 (290)
T PF01212_consen   77 AHIHFDETGAIEELSGAKLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA  154 (290)
T ss_dssp             EHHHHSSTTHHHHHTTCEEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred             ceeeeeccchhhHhcCcEEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence            8743   3344567899999888643  247999999998854      46899999998864 8999999999999999


Q ss_pred             HHcCCEEEEeCCCCCccC--CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          213 KKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       213 ~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +++|+.++.|.+--...-  .+.....+....    .++..|++|..++++   |.+++.+
T Consensus       155 ~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~----D~v~~~~tK~~g~~~---Gavl~~~  208 (290)
T PF01212_consen  155 REHGLPLHMDGARLANAAAALGVSLAEIAAGA----DSVSFGGTKNGGAPG---GAVLAGN  208 (290)
T ss_dssp             HHHT-EEEEEETTHHHHHCHHHHHHHHHHTTS----SEEEEETTSTT-SSS---EEEEEES
T ss_pred             HhCceEEEEehhhHHHhhhcccccHHHHhhhC----CEEEEEEEccccccc---ceEEEec
Confidence            999999999998543211  011111111111    267779999987776   7777655

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PLN02624 ornithine-delta-aminotransferase

Probab=99.61  E-value=9.2e-14  Score=131.33  Aligned_cols=236  Identities=12%  Similarity=0.048  Sum_probs=147.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..++||..|.-.... ---.|.+.+++++++....... +-......+|.+.+++++        ..+.+++++++++|
T Consensus        74 G~~ylD~~sg~~~~~~-Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~--------~~~~~~f~~SGseA  144 (474)
T PLN02624         74 GKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF--------GYDMVLPMNTGAEG  144 (474)
T ss_pred             CCEEEEcccchhcccC-CCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc--------CCCeEEEeCChHHH
Confidence            5567787766422111 1237899999999887643211 111122234455555443        24689999999999


Q ss_pred             HHHHHHHhcC---------CCC-EEEEcCCCCcchHHHHhhCCCe-------------EEEEeccCCCCCcCCHHHHHhh
Q 020968          123 IEVILTVLAR---------PGA-NILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAKGWEVDLDAVEAL  179 (319)
Q Consensus       123 i~~~~~~l~~---------~gd-~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~  179 (319)
                      +..+++....         ++. +|+....+|++....+......             +..++.       .|++.+++.
T Consensus       145 ~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  217 (474)
T PLN02624        145 VETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEKI  217 (474)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHHH
Confidence            9999874432         122 5777777776643222211111             111111       267888888


Q ss_pred             hc---cCceEEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          180 AD---ENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       180 l~---~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      ++   +++.+|++..++|++|.+++.++ +++|.++|++||+++|+||+|.++...|... ..........++   +++|
T Consensus       218 l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pDiv---~lsK  293 (474)
T PLN02624        218 FEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPDVV---ILGK  293 (474)
T ss_pred             HHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCCEE---Eecc
Confidence            75   35677888888999999887665 9999999999999999999999876555322 111111112233   3689


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      .++.+++++|++++++        +++..+..... .+.+.+++.+.++..++
T Consensus       294 ~lggG~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaL  338 (474)
T PLN02624        294 ALGGGVIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAAL  338 (474)
T ss_pred             cccCCCCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHH
Confidence            9988889999999853        35555543322 23356778877776654

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.61  E-value=1.4e-13  Score=127.88  Aligned_cols=201  Identities=14%  Similarity=0.079  Sum_probs=143.5

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE--eCCHHHHHHHHHHHhc--------
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA--------  131 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~~l~--------  131 (319)
                      ++.+.+.+.+...+..... .+...+...++.+.+.+++.+..|.+-..+++..  |+|+|+|++.++.+..        
T Consensus        52 ~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~  130 (431)
T TIGR01788        52 WMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME  130 (431)
T ss_pred             CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence            4456788888887764322 2222334457777777777776664311134544  8999999999886543        


Q ss_pred             CCC-----CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHH
Q 020968          132 RPG-----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ  206 (319)
Q Consensus       132 ~~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~  206 (319)
                      ..|     ..|+++.-.|.++.+.++.+|+++..+++++ +++.+|++.|++++++++.+|+++..+|.||.+   .+++
T Consensus       131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~  206 (431)
T TIGR01788       131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVK  206 (431)
T ss_pred             hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHH
Confidence            112     3688999999999999999999999999865 446799999999999889999999999999999   5599


Q ss_pred             HHHHHHHHc------CCEEEEeCCCCCccC---CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          207 KIAETAKKL------GIMVIADEVYDHLAF---GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       207 ~i~~~~~~~------~~~li~D~a~~~~~~---~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +|+++|+++      |+++++|.+|+.+..   -++....+.   ...-.-+..|.+|++ ..-..+|.+++.+
T Consensus       207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~---~~~~DSis~s~HK~~-~~P~g~G~l~~r~  276 (431)
T TIGR01788       207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR---LPRVKSINVSGHKYG-LVYPGVGWVIWRD  276 (431)
T ss_pred             HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC---CCCceEEEECchhcc-CCCCCcEEEEEeC
Confidence            999999999      999999999996431   122222221   112235777999984 3344488888765

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.60  E-value=5.1e-14  Score=131.46  Aligned_cols=257  Identities=18%  Similarity=0.139  Sum_probs=151.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|.-..... --.|.+.+++.+++.......+..  ...+.+..+++.+.+..+ ....+.+++++++++|
T Consensus        31 dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA  106 (420)
T TIGR00700        31 DGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEA  106 (420)
T ss_pred             CCCEEEECccCHHhccCC-CCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHH
Confidence            467788887774221111 235789999999887643222221  112333445555544221 1123689999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCC-C--------CCcCCHHHHH
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPA-K--------GWEVDLDAVE  177 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~--------~~~~d~~~l~  177 (319)
                      +..+++...  ....+|+....+|++....+... +.             .+..++.... .        .+.-+++.++
T Consensus       107 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (420)
T TIGR00700       107 VENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAAR  186 (420)
T ss_pred             HHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHH
Confidence            999987543  22357888888887754333221 11             1111221100 0        0001245566


Q ss_pred             hhhc-----cCceEEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          178 ALAD-----ENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       178 ~~l~-----~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      +.+.     ++..+|++.-....+|.+++.++ +++|.++|+++|+++|+||+|.++.+.+.. ..+..+...   .-+.
T Consensus       187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~~---pDi~  262 (420)
T TIGR00700       187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGPE---PDLI  262 (420)
T ss_pred             HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCCC---CCEE
Confidence            6542     34456666555666787665454 999999999999999999999998766632 222222211   2234


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      ++||.++ +|+|+||+++++        ++++.+.... ..+.+.++++|.++..++  +.++++.++
T Consensus       263 ~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~  321 (420)
T TIGR00700       263 TTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIER  321 (420)
T ss_pred             Eeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHH
Confidence            5999986 899999999864        4666654322 234567888988875544  345454443

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.59  E-value=1.5e-13  Score=126.04  Aligned_cols=167  Identities=14%  Similarity=0.085  Sum_probs=120.2

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  162 (319)
                      +...+|++.++++.        ..+..+++++++.||.+++.++.++||+|+++.+.|...    ...+...|+++..++
T Consensus        64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd  135 (384)
T PRK06434         64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID  135 (384)
T ss_pred             hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence            45678888888887        345688899999999999999999999999988766543    356678899999998


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      +++.+.+.++        .+++++|++.+|+||++.+   .++++|.++|++++  +++|.+++.-. .+   .++..  
T Consensus       136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~-~~---~pl~~--  196 (384)
T PRK06434        136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPY-NQ---NPLDL--  196 (384)
T ss_pred             CCChhheeec--------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcc-cC---Cchhc--
Confidence            7543333222        1257899999999999998   55999999999998  45699975422 11   12221  


Q ss_pred             CCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                        .-.+++.|.+|.++.+| .-.|.+++.+       +++.++++..+
T Consensus       197 --gaDivv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~  235 (384)
T PRK06434        197 --GADVVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERR  235 (384)
T ss_pred             --CCCEEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHH
Confidence              22389999999988766 4445555533       24666666544

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.59  E-value=2.1e-13  Score=127.22  Aligned_cols=255  Identities=15%  Similarity=0.125  Sum_probs=154.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--..... --.|.+.+++.+++.......+..  ...+.+..+++.+.+..+ ....+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA  113 (421)
T PRK09792         38 EGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAEA  113 (421)
T ss_pred             CCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHHH
Confidence            466788887663221111 346888899999887643222211  123344455555544321 1123689999999999


Q ss_pred             HHHHHHHhcC--CCCEEEEcCCCCcchHHHHhh-CCC-------------eEEEEeccCCCCCcC----CHHHHHhhhc-
Q 020968          123 IEVILTVLAR--PGANILLPRPGFPYYEARATH-SHL-------------EVRHFDLLPAKGWEV----DLDAVEALAD-  181 (319)
Q Consensus       123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~----d~~~l~~~l~-  181 (319)
                      +..+++....  ...+|+....+|++....+.. .+.             .+..++..... ...    +++.+++.+. 
T Consensus       114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~  192 (421)
T PRK09792        114 VENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKS  192 (421)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHh
Confidence            9999886532  235788888888775322221 111             12222221111 011    2467777764 


Q ss_pred             ----cCceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          182 ----ENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       182 ----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                          ++..+|++.-.++++|..+ +.+.+++|.++|+++|+++|+||++.++.+.+.. .....+.....   +.+++|.
T Consensus       193 ~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK~  268 (421)
T PRK09792        193 DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAKS  268 (421)
T ss_pred             ccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeehh
Confidence                2345666655589999765 8899999999999999999999999998776643 33333322222   4689999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hccccccc
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      + .+|+++||++++.        ++.+.+.... ..+...+++.|.+...++  ++++++.+
T Consensus       269 l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~  321 (421)
T PRK09792        269 L-AGGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCE  321 (421)
T ss_pred             h-cCCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHH
Confidence            7 5899999999853        4555543222 224466788887444432  34444443

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.58  E-value=2.8e-13  Score=127.58  Aligned_cols=256  Identities=13%  Similarity=0.092  Sum_probs=149.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..|--...-. --.|.+.+++.++++.....  .......+.+..+++.+.+..+.. ..+.++++++|++|+
T Consensus        53 G~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~  128 (451)
T PRK06918         53 GNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHT--GFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAV  128 (451)
T ss_pred             CCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCc--cccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHH
Confidence            66678887764221111 34678999999988764321  111112344555666665533211 125899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCC--CCcCC--------HHHHH
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAK--GWEVD--------LDAVE  177 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~--~~~~d--------~~~l~  177 (319)
                      ..+++...  ....+|+....+|++....+... +.             .+..++.....  ..+..        .+.++
T Consensus       129 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (451)
T PRK06918        129 ENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFK  208 (451)
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHH
Confidence            99988643  22357888888887754333221 11             11222211000  00110        12333


Q ss_pred             hhh----ccCceEEEEcCCCC-cccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          178 ALA----DENTVALVIINPGN-PCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       178 ~~l----~~~~~~v~l~~p~n-ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      +.+    ..+..+.++.-|-. ..|.++ +.+.+++|.++|+++|+++|+||+|.++.+.+.. .++..++....   +.
T Consensus       209 ~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD---i~  284 (451)
T PRK06918        209 NFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD---LI  284 (451)
T ss_pred             HHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---EE
Confidence            332    22334555556643 346644 5555999999999999999999999998776642 23344432222   44


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH--hcccccccc
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      |+||.++ +|+|+||++++.        ++++.+..... .+.+.+++.|.+...++  +.++.+.++
T Consensus       285 t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~  343 (451)
T PRK06918        285 TVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDR  343 (451)
T ss_pred             eeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHH
Confidence            8999986 899999999853        46666543322 34567888888855543  344444443

>PRK02769 histidine decarboxylase; Provisional

Probab=99.57  E-value=5.3e-13  Score=122.40  Aligned_cols=173  Identities=17%  Similarity=0.136  Sum_probs=127.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCc--EEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968           90 LPARRAIADYLNRDLPYKLSPDD--VYLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLP  165 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~--i~~~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  165 (319)
                      .++.+.+.+++.+.+|.  ++++  .++|+|+|+++..++....  .+++.|+++.-.|.+..+.++.+|++...++.++
T Consensus        64 ~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~  141 (380)
T PRK02769         64 FDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP  141 (380)
T ss_pred             HHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC
Confidence            45555555555555553  3344  4889999999877665432  4678999999999999999999999988888754


Q ss_pred             CCCCcCCHHHHHhhhccC---ceEEEEcCCCCccccccCHHHHHHHHHHHHHcC---CEEEEeCCCCCccCCCCCCCCCc
Q 020968          166 AKGWEVDLDAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLG---IMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       166 ~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                        ++.+|+++|++.+++.   +.+|+++.++|++|.+   .++++|+++|+++|   +++++|.+++.+...-....+..
T Consensus       142 --~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~  216 (380)
T PRK02769        142 --NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF  216 (380)
T ss_pred             --CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence              4579999999999775   8899999999999999   55999999999998   69999999998543110000011


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+.. .-..+..|.+|.++.| ..+|.+++.+
T Consensus       217 d~~~-~vDsis~s~HK~~~~P-~g~G~l~~r~  246 (380)
T PRK02769        217 SFAD-GIDSIAISGHKFIGSP-MPCGIVLAKK  246 (380)
T ss_pred             CccC-CCCEEEECCcccCCCC-CCcEEEEEeh
Confidence            1111 2336778999996533 4588888764

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.57  E-value=8.5e-13  Score=122.95  Aligned_cols=223  Identities=16%  Similarity=0.100  Sum_probs=138.4

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHh-hcCCC-----CCCCCCcCC
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSV-RSARF-----NCYSSTVGI   89 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~-~~~~~-----~~Y~~~~g~   89 (319)
                      +|+.++..+ .+|..+.+   +...  ...+.++|-..+.      ..+|.+++++...+ .....     ..|+..+.+
T Consensus         5 ~~~~~~~~~-~~~~~~~~---~~~~--~~~~~~~l~~sen------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~   72 (416)
T PRK13034          5 FSDSLEEYD-DEVFAAIN---KELE--RQQDHLELIASEN------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFV   72 (416)
T ss_pred             hhhhHhhhC-HHHHHHHH---HHHH--HHhcCeeeccccc------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHH
Confidence            466665544 35555543   1111  1246666666552      35789999988875 33211     011112345


Q ss_pred             HHHHH----HHHHHHhhhCCCCCCCCcEE-EeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHhh--CCCeE--E
Q 020968           90 LPARR----AIADYLNRDLPYKLSPDDVY-LTLGCTQAIEVILTVLARPGANILLPRPGFPYY-EARATH--SHLEV--R  159 (319)
Q Consensus        90 ~~lr~----~ia~~~~~~~g~~~~~~~i~-~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~--~g~~~--~  159 (319)
                      .+|++    .+++++        ..+..+ .+++|+.|+..++.+++++||+|+++...|.+. ...++.  .+...  .
T Consensus        73 ~~lE~~~~~~la~l~--------g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~  144 (416)
T PRK13034         73 DEVEALAIERAKQLF--------GCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAV  144 (416)
T ss_pred             HHHHHHHHHHHHHHh--------CCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeE
Confidence            67777    677766        234564 467889999999999999999999999988662 211111  12221  2


Q ss_pred             EEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCC
Q 020968          160 HFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVP  237 (319)
Q Consensus       160 ~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~  237 (319)
                      .++++. ..+.+|++++++.++. ++++|+++.+.  +|..   .++.+|.++|+++|+++++|++++...+. +....+
T Consensus       145 ~~~~~~-~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~  218 (416)
T PRK13034        145 QYGVDR-LTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNP  218 (416)
T ss_pred             Eccccc-ccCCcCHHHHHHHHhhcCCeEEEECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCC
Confidence            333322 2456899999988753 56777776654  3555   35888888999999999999998865443 221111


Q ss_pred             CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                         +.  .-.++++|++|+++.+.  -|++++.+
T Consensus       219 ---~~--~~Di~~~s~~K~l~g~~--GG~v~~~~  245 (416)
T PRK13034        219 ---FP--HAHVVTTTTHKTLRGPR--GGMILTND  245 (416)
T ss_pred             ---CC--CceEEEEeCcccCCCCC--CeEEEECc
Confidence               11  23489999999974442  37777644

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.55  E-value=1.1e-13  Score=121.00  Aligned_cols=158  Identities=23%  Similarity=0.176  Sum_probs=129.4

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~  162 (319)
                      +....|++.++.+-        ..-.-+.+.+++.|+..++..+.++||.|+..+--|.+    +...++.+|+++.+++
T Consensus        62 PT~~vlE~RiAaLE--------GG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd  133 (426)
T COG2873          62 PTTDVLEERIAALE--------GGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD  133 (426)
T ss_pred             chHHHHHHHHHHhh--------cchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence            45578888888776        22345667788999999999999999999999877755    3455688999999887


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       .|++.+++++++++++|++....||.+.+++   +++|+++|+++++++|+|.++..-        .+....
T Consensus       134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atp--------yl~rP~  195 (426)
T COG2873         134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATP--------YLCRPI  195 (426)
T ss_pred             C-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcc--------eecchh
Confidence            5       3899999999999999999999999999955   999999999999999999998761        222222


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEee
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      +..-.|++.|+||+.+..|--+|-+++.
T Consensus       196 ~hGADIVvHS~TK~igGhGt~iGG~iVD  223 (426)
T COG2873         196 EHGADIVVHSATKYIGGHGTAIGGVIVD  223 (426)
T ss_pred             hcCCCEEEEeecccccCCccccceEEEe
Confidence            2344599999999999999999998873

>PRK15029 arginine decarboxylase; Provisional

Probab=99.54  E-value=4.2e-13  Score=130.97  Aligned_cols=193  Identities=11%  Similarity=0.049  Sum_probs=136.6

Q ss_pred             CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEec
Q 020968           84 SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL  163 (319)
Q Consensus        84 ~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  163 (319)
                      .|..-+.+..+..|+.++       .....++++|+|.++.+++.+++++||+|+++..+|.+....+...|+.++++..
T Consensus       202 ~p~G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P  274 (755)
T PRK15029        202 DHTGAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVP  274 (755)
T ss_pred             CCCcHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecc
Confidence            344445677777777773       2467899999999999999999999999999999999999999999999998865


Q ss_pred             cCCCCC----cCC-----HHHHHhhhccC--ce--------EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCC
Q 020968          164 LPAKGW----EVD-----LDAVEALADEN--TV--------ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV  224 (319)
Q Consensus       164 ~~~~~~----~~d-----~~~l~~~l~~~--~~--------~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a  224 (319)
                      .. +.+    .++     ++.+++++...  .+        ++++++|+. .|++++   +++|+++|++++++|++|||
T Consensus       275 ~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEA  349 (755)
T PRK15029        275 SR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEA  349 (755)
T ss_pred             cc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECc
Confidence            43 222    234     88898887432  23        889999874 688855   89999999999999999999


Q ss_pred             CCCc-cCCCCCCCCCccc-----C-CCCCeEEEecCccccCCCcceeeEEEeeCCC-CCccchHHHHHHHHhhhh
Q 020968          225 YDHL-AFGNTPFVPMGVF-----G-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPN-GILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       225 ~~~~-~~~~~~~~~~~~~-----~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~-~~~~~~~~~~~~~~~~~~  291 (319)
                      |+.. .|.. ..+....+     . ....++++.|.+|+  +|++.-|.++.-+.+ ......++.+.+..++++
T Consensus       350 hGah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id~~r~~~~l~~~qST  421 (755)
T PRK15029        350 WYGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHATT  421 (755)
T ss_pred             cccccccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccCHHHHHHHHHHHcCC
Confidence            9864 3432 22211222     1 11235999999999  677777776544222 122223444445444443

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.54  E-value=1.2e-13  Score=117.12  Aligned_cols=218  Identities=17%  Similarity=0.203  Sum_probs=155.3

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      ...++|-+...+     .|..+++++|.++...+..  |+.++...+|++.+|+.+.        .+.-++++++|.++.
T Consensus        21 ~~~vDLRSDTvT-----~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~G--------KEAgLFv~SGTmgNl   85 (384)
T KOG1368|consen   21 HRSVDLRSDTVT-----VPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFG--------KEAGLFVPSGTMGNL   85 (384)
T ss_pred             eecccccccccc-----CChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhC--------ccceeeecccccccH
Confidence            345666666543     6678999999998877765  6666677899999999983        455555566666777


Q ss_pred             HHHHHhc-CCCCEEEEcCCCCcc-hH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--------CceEEEEcCC
Q 020968          125 VILTVLA-RPGANILLPRPGFPY-YE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--------NTVALVIINP  192 (319)
Q Consensus       125 ~~~~~l~-~~gd~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~l~~p  192 (319)
                      ++++..+ ++|..|++-+-+|-. |.  .+....|+.+.++.  ++++..+++++||.++..        -+++|++.|.
T Consensus        86 laIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~--~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT  163 (384)
T KOG1368|consen   86 LAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVK--NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENT  163 (384)
T ss_pred             HHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeee--eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecc
Confidence            7777665 589999999877732 33  45566777776665  456678999999998862        4689999999


Q ss_pred             CCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +|-+| .++|.+++.++.++|+++++.+.+|.+--+..--.. -.++..+...-. -+.-.+||.++.|   +|.+++.+
T Consensus       164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavas-gV~vk~i~~~fD-SVsiCLSKglgAP---VGSViVG~  238 (384)
T KOG1368|consen  164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVAS-GVPVKKICSAFD-SVSICLSKGLGAP---VGSVIVGS  238 (384)
T ss_pred             ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHc-CCCHHHHHHhhh-hhhhhhhccCCCC---cccEEEcc
Confidence            87776 999999999999999999999999997654321100 122222221111 1223689998777   78887765


Q ss_pred             CCCCccchHHHHHHHHhhhh
Q 020968          272 PNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~  291 (319)
                      +       .++++.+.++-.
T Consensus       239 k-------~FI~kA~~~RKa  251 (384)
T KOG1368|consen  239 K-------DFIDKARHFRKA  251 (384)
T ss_pred             H-------HHHHHHHHHHHH
Confidence            4       588888877654

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.54  E-value=5.4e-13  Score=124.46  Aligned_cols=247  Identities=15%  Similarity=0.107  Sum_probs=150.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--..... --.|.+.+++.+++.......+..  ...+.+..+++.+.+..+. -..+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA  113 (421)
T PRK06777         38 EGREYIDFAAGIAVLNTG-HRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAPI-DGPAKTAFFTTGAEA  113 (421)
T ss_pred             CCCEEEEcccCHHhhccC-CCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHH
Confidence            466788887663211111 335788899999887643222211  1123334455555443210 124689999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhh-CCCe-------------EEEEeccCCCCC----cCCHHHHHhhhc-
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARATH-SHLE-------------VRHFDLLPAKGW----EVDLDAVEALAD-  181 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~----~~d~~~l~~~l~-  181 (319)
                      +..+++...  ....+|+....+|++....+.. .+..             +..++. +....    ..+++.+++.+. 
T Consensus       114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~  192 (421)
T PRK06777        114 VENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLFKA  192 (421)
T ss_pred             HHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHHHh
Confidence            999988543  1235788888888775433332 1210             111111 10000    113556777664 


Q ss_pred             ----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          182 ----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       182 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                          ++..+|++....+..|. +++.+.++++.++|+++|+++|+||+|.++.+.+.. .....+.....++   ++||.
T Consensus       193 ~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK~  268 (421)
T PRK06777        193 DIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAKS  268 (421)
T ss_pred             ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeehh
Confidence                23455555555677785 678999999999999999999999999998766642 2233333222233   79999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++ +|+|+||++++.        ++++.+..... .+.+.+++.|.++..++
T Consensus       269 l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L  311 (421)
T PRK06777        269 LG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVL  311 (421)
T ss_pred             hc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence            87 899999999853        46665543322 34567888888877765

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.54  E-value=2.1e-12  Score=108.41  Aligned_cols=205  Identities=16%  Similarity=0.178  Sum_probs=159.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC--------CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--------STVGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--------~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      ..+.||++.=...    --++++.++++.+.-+......|-        ..+-+..+.+.+++|+        ..|.+-+
T Consensus        14 ~r~~iNv~PiQrG----GiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~   81 (382)
T COG1103          14 TRGFINVNPIQRG----GILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRV   81 (382)
T ss_pred             hcCccccChhhcc----CcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeee
Confidence            3566666644332    245678888887764432111111        1123567788899998        6788999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEE
Q 020968          116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALV  188 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~  188 (319)
                      |.|+.++-++++++++++||.|++....|....-.++..|+++..+|......|.++++...+.+.+       .+.+++
T Consensus        82 t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lal  161 (382)
T COG1103          82 TAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALAL  161 (382)
T ss_pred             cccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEE
Confidence            9999999999999999999999999998887778889999999999976666688999888776642       367888


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      ++++....|..   .+-++++++|++++++++...+|..    |.-+.+......+   ++++|-+|++ .+.-.+|.+.
T Consensus       162 lTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~  230 (382)
T COG1103         162 LTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLA  230 (382)
T ss_pred             EeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEe
Confidence            99998889988   6799999999999999999999987    5566666666554   9999999995 6667899987


Q ss_pred             eeC
Q 020968          269 TSD  271 (319)
Q Consensus       269 ~~~  271 (319)
                      ...
T Consensus       231 ~~e  233 (382)
T COG1103         231 MSE  233 (382)
T ss_pred             ehh
Confidence            743

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.53  E-value=1e-12  Score=120.82  Aligned_cols=185  Identities=18%  Similarity=0.170  Sum_probs=133.2

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHhhCCCeEEE
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY-YEARATHSHLEVRH  160 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~~g~~~~~  160 (319)
                      .|+.++...+|++.+++++        ..+.++.++++|.|+++++...+++||.|  +...|.. ........|...+.
T Consensus        73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD  142 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD  142 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence            5888889999999999999        45679999999999998776678899965  4444433 33335677775444


Q ss_pred             Eecc--------CCCCCcCCHHHHHhhhccC----ceEEEEcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCC
Q 020968          161 FDLL--------PAKGWEVDLDAVEALADEN----TVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH  227 (319)
Q Consensus       161 ~~~~--------~~~~~~~d~~~l~~~l~~~----~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~  227 (319)
                      +..+        ....+.+|+++++++++++    ++++.+.+++|.. |..+|.++++++.++|+++|+.||+|.+...
T Consensus       143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~  222 (460)
T PRK13237        143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV  222 (460)
T ss_pred             eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence            4211        1245789999999998753    3467778888887 7999999999999999999999999998874


Q ss_pred             c----c------CCCCCCC----CCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          228 L----A------FGNTPFV----PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       228 ~----~------~~~~~~~----~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      -    +      +.+....    .+.++.    .+++.|++|.++.+-  -|+++..+       +++.++++..+
T Consensus       223 gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~  285 (460)
T PRK13237        223 ENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELV  285 (460)
T ss_pred             cChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhc
Confidence            2    1      1121100    011122    277889999976651  28888765       36888888774

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.53  E-value=1.3e-12  Score=121.98  Aligned_cols=204  Identities=19%  Similarity=0.166  Sum_probs=152.8

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC--------
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP--------  133 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~--------  133 (319)
                      .+++...+.+...+..... .-...++..++++.+.+++.+.++.. ..-.=.+|+|+|+++.+++.+....        
T Consensus        73 ~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~  150 (460)
T COG0076          73 RVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE  150 (460)
T ss_pred             CCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence            4567777777776665321 11122366899999999999887755 3445689999999999887765311        


Q ss_pred             C------CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceE--EEEcCCCCccccccCHHHH
Q 020968          134 G------ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA--LVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       134 g------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--v~l~~p~nptG~~~~~~~l  205 (319)
                      +      ..|+++.-.|.++.+.+..+|++...++..+. ++.+|++++++++++.+..  |+-+.++.++|.+   +++
T Consensus       151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi  226 (460)
T COG0076         151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDI  226 (460)
T ss_pred             ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCH
Confidence            1      16999999999999999999999999998765 7789999999999887665  7778889999999   889


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ++|.++|+++++++++|.||+++..--..+.....+.-..-.-+.-+++|. +..=..+||++..++
T Consensus       227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~  292 (460)
T COG0076         227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDE  292 (460)
T ss_pred             HHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccc-cCCCCCceEEEEECH
Confidence            999999999999999999999876411111111112221223455699999 676677999999875

>PLN03032 serine decarboxylase; Provisional

Probab=99.51  E-value=3.8e-12  Score=116.06  Aligned_cols=172  Identities=20%  Similarity=0.137  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      ..++.+.+.+++.+.+|  .+++++  ++|+|+|+++..++....  .++..|+++.-.|.+..+.++.+|.++..++.+
T Consensus        64 a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d  141 (374)
T PLN03032         64 SRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTL  141 (374)
T ss_pred             HHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeC
Confidence            35666666666666555  355666  999999999998887654  245689999999999999999999998888875


Q ss_pred             CCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC-----CEEEEeCCCCCccC--CCCC
Q 020968          165 PAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG-----IMVIADEVYDHLAF--GNTP  234 (319)
Q Consensus       165 ~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~-----~~li~D~a~~~~~~--~~~~  234 (319)
                      .  ++.+|+++|++++++   ++.+|+++..+|++|.+   +++++|+++|+++|     +++++|.+|+.+..  ... 
T Consensus       142 ~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~-  215 (374)
T PLN03032        142 P--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR-  215 (374)
T ss_pred             C--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC-
Confidence            4  457999999999976   46678888889999999   66999999999986     58999999987432  111 


Q ss_pred             CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          235 FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       235 ~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                       .+...+.. .-.-+..|.+|..+.| ..+|.+++.+
T Consensus       216 -~~~~~~~~-~vDSis~s~HK~~g~P-~g~G~ll~r~  249 (374)
T PLN03032        216 -APEVTFRK-PIGSVSVSGHKFLGCP-MPCGVALTRK  249 (374)
T ss_pred             -CcccCCCc-CCcEEEECcccccCCC-cCeEEEEEEc
Confidence             01111211 1235677999995433 4588888865

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.51  E-value=7e-13  Score=132.85  Aligned_cols=162  Identities=14%  Similarity=0.144  Sum_probs=127.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH----HHHHHHHHHhcCC-CC----EEEEcCCCCcchHHHHhhCCCeEEE
Q 020968           90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCT----QAIEVILTVLARP-GA----NILLPRPGFPYYEARATHSHLEVRH  160 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t----~ai~~~~~~l~~~-gd----~Vl~~~p~~~~~~~~~~~~g~~~~~  160 (319)
                      .++|+.+++++    |    .+.|.++++++    ++++++++++.++ ||    +|+++...|......+...|++++.
T Consensus       571 ~~~r~~la~i~----g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~  642 (993)
T PLN02414        571 EDLGDLLCEIT----G----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV  642 (993)
T ss_pred             HHHHHHHHHHh----C----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence            35555555555    3    38999999998    8999999998866 88    8999999999888888889999999


Q ss_pred             EeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968          161 FDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP  237 (319)
Q Consensus       161 ~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~  237 (319)
                      ++.+.  ++.+|+++|++++++   ++++|++++|+|-+|..   .++++|+++|+++|+++++|.++..-..   ....
T Consensus       643 v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~  714 (993)
T PLN02414        643 VGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGANMNAQV---GLTS  714 (993)
T ss_pred             eccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEecCHHhcc---CcCC
Confidence            99853  347999999999984   67899999999999998   5699999999999999999999865211   1112


Q ss_pred             CcccCCCCCeEEEecCccccCCC----cceeeEEEee
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTS  270 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~~  270 (319)
                      ...++   -.++++|.+|+|+.|    |-.+|++.+.
T Consensus       715 p~~~G---aD~~~~s~HK~f~~P~G~GGPg~G~l~~~  748 (993)
T PLN02414        715 PGFIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVK  748 (993)
T ss_pred             ccccC---CCEEEecCCccCCcCcccCCCCeeeEEEc
Confidence            22233   248899999987743    5668888663

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.49  E-value=2.1e-12  Score=116.35  Aligned_cols=188  Identities=21%  Similarity=0.273  Sum_probs=138.7

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR  141 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~  141 (319)
                      +.++.+++++.+..    ..+.++.  ..++-+.+.+.+...++.. +.+-+++++++|.++..++.+++++||+|++..
T Consensus        15 ~v~~~V~~am~~~~----~~h~s~~--F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~   87 (383)
T COG0075          15 PVPPRVLLAMARPM----VGHRSPD--FVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVV   87 (383)
T ss_pred             CCCHHHHHHhcCCC----CCCCCHH--HHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence            67788888776543    2234432  2333333344444434322 345567778899999999999999999999888


Q ss_pred             CCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968          142 PGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI  217 (319)
Q Consensus       142 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~  217 (319)
                      ....+  +..+++.+|++++.+...  .+-.+|++++++.+++  ..++|.++|.-.+||+.   .++++|+++|++||.
T Consensus        88 nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g~  162 (383)
T COG0075          88 NGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHGA  162 (383)
T ss_pred             CChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcCC
Confidence            77754  678999999999998875  3446899999999984  46789999999999999   459999999999999


Q ss_pred             EEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC-CcceeeEEEee
Q 020968          218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTS  270 (319)
Q Consensus       218 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~  270 (319)
                      ++|+|..-+.    |..+..+..+.-   .+++.+.-|.+++ ||  +|++.++
T Consensus       163 l~iVDaVsS~----Gg~~~~vd~wgi---Dv~itgSQK~l~~PPG--la~v~~S  207 (383)
T COG0075         163 LLIVDAVSSL----GGEPLKVDEWGI---DVAITGSQKALGAPPG--LAFVAVS  207 (383)
T ss_pred             EEEEEecccC----CCcccchhhcCc---cEEEecCchhccCCCc--cceeEEC
Confidence            9999998775    223334444433   3999999999888 57  5666653

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.48  E-value=5.8e-12  Score=116.55  Aligned_cols=216  Identities=18%  Similarity=0.151  Sum_probs=141.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--..+-.+. .|.+.+++.+++..... .+  .....+.+..+++++.+..    ..+.+++++++++|
T Consensus        34 dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA  105 (395)
T PRK03715         34 NGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA  105 (395)
T ss_pred             CCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence            46788999876432222233 58899999988765322 11  1234577788888886532    24689999999999


Q ss_pred             HHHHHHHhcC------CC-CEEEEcCCCCcchH-HHHhhCCCeEEEEeccC-CCCC----cCCHHHHHhhhccCceEEEE
Q 020968          123 IEVILTVLAR------PG-ANILLPRPGFPYYE-ARATHSHLEVRHFDLLP-AKGW----EVDLDAVEALADENTVALVI  189 (319)
Q Consensus       123 i~~~~~~l~~------~g-d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~v~l  189 (319)
                      +..+++....      +| .+|+.....|++.. ..+...+.........+ ..++    ..|++.+++.+.+++.+|++
T Consensus       106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~  185 (395)
T PRK03715        106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML  185 (395)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence            9999987741      23 57888888887643 33333332211100000 0111    13788999888777777777


Q ss_pred             cCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          190 INPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       190 ~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      ...++..|.+. +.+.++++.++|+++|+++|+||++.++...|.... ...+.-... +  .+++|.++ .|+.+|.++
T Consensus       186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD-i--~t~gK~lg-~G~p~~av~  260 (395)
T PRK03715        186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD-I--MTLGKGIG-GGVPLAALL  260 (395)
T ss_pred             eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc-e--eeehhhhh-CCcceEEEE
Confidence            76677778764 678899999999999999999999998655554321 111221112 2  47799975 479999998


Q ss_pred             eeC
Q 020968          269 TSD  271 (319)
Q Consensus       269 ~~~  271 (319)
                      +.+
T Consensus       261 ~~~  263 (395)
T PRK03715        261 AKA  263 (395)
T ss_pred             Ecc
Confidence            754

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.48  E-value=2.5e-12  Score=128.91  Aligned_cols=207  Identities=16%  Similarity=0.151  Sum_probs=136.2

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC---CCCC----CcCCHHHHHHHHHHHhhhCCCCCCCC--cEEEe
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN---CYSS----TVGILPARRAIADYLNRDLPYKLSPD--DVYLT  116 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~--~i~~~  116 (319)
                      +++.|+.+..+    +.++..+.+++.........+   .|..    ..-+++.|+.+++++      +.+++  +|++|
T Consensus        34 ~~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFt  103 (805)
T PLN02724         34 GVVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFT  103 (805)
T ss_pred             CCEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEe
Confidence            47899998754    234456666665554321111   1111    123567788888887      33444  58999


Q ss_pred             CCHHHHHHHHHHHh-cCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCC------CCCcCCH--HHHHhhh----
Q 020968          117 LGCTQAIEVILTVL-ARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPA------KGWEVDL--DAVEALA----  180 (319)
Q Consensus       117 ~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~------~~~~~d~--~~l~~~l----  180 (319)
                      +|+|+|+++++.++ .++||+|++..-.|.+..   ..++..|+++..++++..      ....++.  +.+++.+    
T Consensus       104 snaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l  183 (805)
T PLN02724        104 SGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKL  183 (805)
T ss_pred             CChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhh
Confidence            99999999999987 578999999887776643   334567999988887521      1112332  5566543    


Q ss_pred             ------ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc-----CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968          181 ------DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL-----GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT  249 (319)
Q Consensus       181 ------~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~  249 (319)
                            .+++++|.+++.+|.||.++|.+.+.++.+.++.+     ++++++|.++.-    ++.+..+..+..   .++
T Consensus       184 ~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~---Dfl  256 (805)
T PLN02724        184 QKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPA---DFV  256 (805)
T ss_pred             ccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCC---CEE
Confidence                  13557999999999999999966554444433322     368999999876    444455555443   389


Q ss_pred             EecCccccCCC-cceeeEEEeeC
Q 020968          250 LGSISKRWIVP-GWRLGWLVTSD  271 (319)
Q Consensus       250 ~~s~sK~~~~~-G~r~G~i~~~~  271 (319)
                      +.|++|+|+.| |  +|++++.+
T Consensus       257 ~~S~HK~~GgP~G--~G~L~vr~  277 (805)
T PLN02724        257 VVSFYKIFGYPTG--LGALLVRR  277 (805)
T ss_pred             EEecceeccCCCC--ceEEEEeh
Confidence            99999998744 5  77777654

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.47  E-value=1.6e-12  Score=116.30  Aligned_cols=244  Identities=18%  Similarity=0.203  Sum_probs=157.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      ++..+|||..|--.... -..+|.+.++++++.+.-..  +.|.     .+.+..+++.+.+..+   ..+.++++++++
T Consensus        40 ~G~~YlDf~~Giav~~l-GH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff~NSGa  110 (404)
T COG4992          40 QGREYLDFAAGIAVNNL-GHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFFCNSGA  110 (404)
T ss_pred             CCCEeeeeccceeeecc-CCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---cccEEEEcCCcH
Confidence            47788998888532211 25679999999998765321  2232     3556666666655322   378999999999


Q ss_pred             HHHHHHHHHhcCC-----CCEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcCCHHHHHhhhcc
Q 020968          121 QAIEVILTVLARP-----GANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEALADE  182 (319)
Q Consensus       121 ~ai~~~~~~l~~~-----gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~l~~  182 (319)
                      ||++.+++.-.+-     ..+|+.....|++--..+-..+-             .+..+|.       -|++++++++++
T Consensus       111 EA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai~~  183 (404)
T COG4992         111 EANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAIDE  183 (404)
T ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHhcc
Confidence            9999999865321     24777777776542111111111             1112221       189999999999


Q ss_pred             CceEEEEcCCCCccccccCH-HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968          183 NTVALVIINPGNPCGNVYTY-QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       183 ~~~~v~l~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G  261 (319)
                      ++.+|++....-..|++.+. +-++++.++|++||+++|.||++.++..+|+-+. ...+.-.+.++   ++.|.+ ..|
T Consensus       184 ~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA-~e~~gV~PDI~---tlaK~L-gGG  258 (404)
T COG4992         184 DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFA-YEHYGVEPDIL---TLAKAL-GGG  258 (404)
T ss_pred             CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHH-HHHhCCCCCEE---Eeeccc-cCC
Confidence            99999988888889976654 4589999999999999999999999887774321 11122212233   679995 667


Q ss_pred             ceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hccccccc
Q 020968          262 WRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      +.+|.+++..        .....+..-. ..+.+.++++..+...++  +.++++.+
T Consensus       259 ~PigA~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~  307 (404)
T COG4992         259 FPIGAMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLE  307 (404)
T ss_pred             ccceeeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHH
Confidence            9999999852        1333333222 234556777776655543  45555544

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.47  E-value=4.4e-12  Score=118.37  Aligned_cols=256  Identities=14%  Similarity=0.096  Sum_probs=149.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--...- ---.|.+.++++++++....  +.......+.+..+++.+.+..+.. ..+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA  113 (425)
T PRK07495         38 EGRRYIDFAAGIAVVNT-GHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGAEA  113 (425)
T ss_pred             CCCEEEEccccHHhhcc-CCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHH
Confidence            36678888777322111 13467888999998875321  1111112234444555555432211 12589999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhh-CCC-------------eEEEEeccCCCCCcCC----HHHHHhhhc-
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARATH-SHL-------------EVRHFDLLPAKGWEVD----LDAVEALAD-  181 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~d----~~~l~~~l~-  181 (319)
                      +..+++...  ....+|+.....|++....+.. .+.             .+..++...... +.+    ++.+++.+. 
T Consensus       114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~~~  192 (425)
T PRK07495        114 VENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVEQSLAALDKLFKA  192 (425)
T ss_pred             HHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccc-cccHHHHHHHHHHHHHh
Confidence            999988543  2246788888888765322211 110             123333321111 122    344566553 


Q ss_pred             ----cCceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          182 ----ENTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       182 ----~~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                          ++..+|++.....-+| ..++.+.++++.++|+++|+++|+||++.++...+..    ..+...+.+.-+.++||.
T Consensus       193 ~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~----~a~~~~gv~pDi~tlsK~  268 (425)
T PRK07495        193 DVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL----FAMEHHEVAADLTTMAKG  268 (425)
T ss_pred             ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc----eeecccCCCCCEEeehhh
Confidence                2344555443332377 4578899999999999999999999999987665532    112222233456789999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      + .+|+++|+++++.        ++.+.+.... ..+.+.+++.+.+...++  ++++++.++
T Consensus       269 l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~  322 (425)
T PRK07495        269 L-AGGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCER  322 (425)
T ss_pred             h-cCCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHH
Confidence            6 4899999999864        3555544322 234466788887544433  444444443

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.47  E-value=4.9e-12  Score=118.68  Aligned_cols=247  Identities=17%  Similarity=0.100  Sum_probs=143.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--..... --.|.+.+++.++++.........  ...+....+++.+.+..+  -..+.+++++++++|
T Consensus        41 dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~~--~~~~~v~f~~SGseA  115 (433)
T PRK08117         41 DGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGV--IYYESILKLAEELAEITP--GGLDCFFFSNSGAEA  115 (433)
T ss_pred             CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence            366778887774221111 346789999999887532211110  112334445555444321  134689999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCC--C-----------eEEEEeccCCCC--Cc--------CCHHHH
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARAT-HSH--L-----------EVRHFDLLPAKG--WE--------VDLDAV  176 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g--~-----------~~~~~~~~~~~~--~~--------~d~~~l  176 (319)
                      +..+++...  ....+|+...-.|++....+. ..+  .           .+..++......  ..        -+++.+
T Consensus       116 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  195 (433)
T PRK08117        116 IEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDL  195 (433)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHH
Confidence            999988632  123678888877876432221 111  0           112222211000  00        144556


Q ss_pred             Hhhhc-----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          177 EALAD-----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       177 ~~~l~-----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      ++.++     ++..+|++.......|.+ .+.+.++++.++|++||+++|+||+|.++...|.... ...++-.   .-+
T Consensus       196 ~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~---pDi  271 (433)
T PRK08117        196 ESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVV---PDI  271 (433)
T ss_pred             HHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCC---CCE
Confidence            66553     234455555445556765 5778899999999999999999999998766654321 1122211   224


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      .+++|.++ +|+++|++++.+        ++++.+..... .+.+.+++++.++...+
T Consensus       272 ~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L  320 (433)
T PRK08117        272 MTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATL  320 (433)
T ss_pred             eehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHH
Confidence            69999986 899999999853        46665543222 23455777777766654

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.46  E-value=4.1e-12  Score=118.83  Aligned_cols=257  Identities=18%  Similarity=0.128  Sum_probs=149.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..... --.|.+.+++++++.......+.  ....+.+..+++.+.+..+  -..+.+++++++++|
T Consensus        40 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA  114 (423)
T PRK05964         40 DGRELIDAISSWWVATHG-HNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTP--GGLDHVFFSDSGSVA  114 (423)
T ss_pred             CCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHH
Confidence            467788887774221111 23588999999988764321111  0112445556666655322  124689999999999


Q ss_pred             HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCCCCcCCHHHHHhhhc
Q 020968          123 IEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGWEVDLDAVEALAD  181 (319)
Q Consensus       123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~~d~~~l~~~l~  181 (319)
                      +..+++....       + ..+|+...-.|++....+... +-            .+..++....+....+++.+++.+.
T Consensus       115 ~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~  194 (423)
T PRK05964        115 VEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLE  194 (423)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHH
Confidence            9999886521       2 368888888887744333221 11            1122222110000112677777774


Q ss_pred             ---cCceEEEEcC-CCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          182 ---ENTVALVIIN-PGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       182 ---~~~~~v~l~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                         ++..+|++.. .....|... +.+.++++.++|+++|+++|+||++.++...|... ....+.-...   +-+++|.
T Consensus       195 ~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K~  270 (423)
T PRK05964        195 KHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSKG  270 (423)
T ss_pred             hCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeehh
Confidence               2344555544 366677654 88999999999999999999999998875555321 1111221112   2367899


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHh-------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      ++.+++++|++++..        ++.+.+...       .+.+.+.++++..++...+  +++++|.++
T Consensus       271 l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~  331 (423)
T PRK05964        271 LTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLER  331 (423)
T ss_pred             hhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence            866668999988743        466666421       1122345666655554444  345556554

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.45  E-value=8.7e-12  Score=117.53  Aligned_cols=202  Identities=11%  Similarity=0.054  Sum_probs=131.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC------CcCCHHH----HHHHHHHHhhhCCCCCCCCcE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS------TVGILPA----RRAIADYLNRDLPYKLSPDDV  113 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~------~~g~~~l----r~~ia~~~~~~~g~~~~~~~i  113 (319)
                      ..+.|+|-..+.      .++|.+++++...+.......++.      ......+    |+.+++++    |  .+++++
T Consensus        33 ~~~~l~l~~sen------~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~  100 (452)
T PTZ00094         33 QIEGLELIASEN------FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEW  100 (452)
T ss_pred             HHcCeeEecccc------cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccc
Confidence            467889888872      567889898887765422112221      1112233    34555555    3  356677


Q ss_pred             EEe---CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh----------CCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968          114 YLT---LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH----------SHLEVRHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       114 ~~~---~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                      .++   +|+++++..++.++.++||+|++....|..+...+..          .+.++..++.+.  ++.+|++++++.+
T Consensus       101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l  178 (452)
T PTZ00094        101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA  178 (452)
T ss_pred             eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence            666   7899999999999999999999988777654332211          112233344433  3579999999998


Q ss_pred             cc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC-CCCCcccCCCCCeEEEecCccccC
Q 020968          181 DE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       181 ~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                      +. +++++++.  ++.+|...+   +++|.++|+++|+++++|++++........ +.++.     .-.+++.|.+|+++
T Consensus       179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~  248 (452)
T PTZ00094        179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR  248 (452)
T ss_pred             HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence            54 56666654  345888865   788888999999999999999874432211 11111     22388999999864


Q ss_pred             CCcceeeEEEeeC
Q 020968          259 VPGWRLGWLVTSD  271 (319)
Q Consensus       259 ~~G~r~G~i~~~~  271 (319)
                      .|.  .|++.+.+
T Consensus       249 GP~--Gg~l~~~~  259 (452)
T PTZ00094        249 GPR--SGLIFYRK  259 (452)
T ss_pred             CCC--ceEEEEec
Confidence            443  47777743

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.43  E-value=3.8e-11  Score=111.78  Aligned_cols=218  Identities=14%  Similarity=0.049  Sum_probs=142.5

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .+-|+|-..+      -.+.+.+.+++...+......      .|+.....++++....++.++.+|..  ..+|=..+ 
T Consensus        49 ~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~anvqp~S-  119 (493)
T PRK13580         49 RSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAYVQPHS-  119 (493)
T ss_pred             hcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--cccccCCC-
Confidence            5677777666      245688888877655443222      23334556777777777777766533  34444444 


Q ss_pred             HHHHHHHHHHHhcCC-------------------------------CCEEEEcCCCCcchH---HHHhhCC--CeEEEEe
Q 020968          119 CTQAIEVILTVLARP-------------------------------GANILLPRPGFPYYE---ARATHSH--LEVRHFD  162 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~-------------------------------gd~Vl~~~p~~~~~~---~~~~~~g--~~~~~~~  162 (319)
                      ++.|+..++.++++|                               ||+|+..++....+.   ......+  .+...++
T Consensus       120 g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~  199 (493)
T PRK13580        120 GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYG  199 (493)
T ss_pred             cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecc
Confidence            466777888888865                               799998766553321   1111222  4555566


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCccc
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVF  241 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~  241 (319)
                      ++++ ...+|++++++.+.+.++.+++++.+|-.+ ..   ++++|.++|+++|+++++|++|.....++.... .....
T Consensus       200 vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~  274 (493)
T PRK13580        200 VDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV  274 (493)
T ss_pred             cCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC
Confidence            6533 357999999999998888999998877644 54   489999999999999999999997655432211 00111


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~  288 (319)
                      .  ...|+++|++|++  .|-+.|++++..        ++++.+...
T Consensus       275 ~--~~D~vtgT~hKaL--~GP~GG~I~~~~--------~l~~~L~~a  309 (493)
T PRK13580        275 P--HADIVTTTTHKTL--RGPRGGLVLAKK--------EYADAVDKG  309 (493)
T ss_pred             C--CCcEEEeCChhhc--cCCCeEEEEecH--------HHHHHHhhC
Confidence            1  2238899999996  333458888753        466666433

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.42  E-value=4.1e-11  Score=112.61  Aligned_cols=247  Identities=18%  Similarity=0.104  Sum_probs=144.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++|+..|--...- ---.|.+.+++.+++....  .+.......+.+..+++.+.+..+. ...+.+++++++++|+
T Consensus        55 G~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~  130 (443)
T PRK06058         55 GNRLIDLGSGIAVTSV-GNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEAV  130 (443)
T ss_pred             CCEEEEcCcchhhhcc-CCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHH
Confidence            5567777766321111 1346889999999887532  2222112345566677776554321 1125789999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCC-CC---CcC--------CHHH
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPA-KG---WEV--------DLDA  175 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~~---~~~--------d~~~  175 (319)
                      ..+++...  ...++|+....+|+++...+... +.             .+..++.... ..   ...        ..+.
T Consensus       131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (443)
T PRK06058        131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITV  210 (443)
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHH
Confidence            99988432  23378999999998865443321 10             1111221100 00   001        1223


Q ss_pred             HHhhhccCceEEEEcCCCCcc-ccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecC
Q 020968          176 VEALADENTVALVIINPGNPC-GNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI  253 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~  253 (319)
                      +++.+..+..+.++.-|-+.. |.+ .+.+.++++.++|+++|+++|.||++.+|...|..+ ....++-.+.++   ++
T Consensus       211 l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv---~~  286 (443)
T PRK06058        211 IEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI---TT  286 (443)
T ss_pred             HHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---EE
Confidence            334433233344456664444 554 467789999999999999999999999886655432 112222222234   34


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      +|.++ .|+++|++++.+        ++.+.+.... ..+.+.+++++.++...+
T Consensus       287 gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L  332 (443)
T PRK06058        287 AKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAI  332 (443)
T ss_pred             ccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence            79976 799999999853        4555554332 234567888888777755

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.42  E-value=6.5e-12  Score=121.66  Aligned_cols=171  Identities=13%  Similarity=0.158  Sum_probs=122.4

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HhhCCCeEEEEec
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRHFDL  163 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~  163 (319)
                      +..-..+..+..|+.++       .....++++|+|.++..++.+++.+||+|++...+|.+.... +...|+.++++..
T Consensus       172 ~eG~i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P  244 (720)
T PRK13578        172 HEGAAKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLET  244 (720)
T ss_pred             CChHHHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeec
Confidence            33334566666777663       245789999999999999999999999999999999987774 8899999998875


Q ss_pred             cCCCCCc----CCH-----HHHHhhhccC----------ceEEEEcCCCCccccccCHHHHHHHHHH-HHHcCCEEEEeC
Q 020968          164 LPAKGWE----VDL-----DAVEALADEN----------TVALVIINPGNPCGNVYTYQHLQKIAET-AKKLGIMVIADE  223 (319)
Q Consensus       164 ~~~~~~~----~d~-----~~l~~~l~~~----------~~~v~l~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~D~  223 (319)
                      .. +.++    ++.     +.+++++.+.          .+++++++|+. .|++++   +++|+++ ++.++ .|++||
T Consensus       245 ~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDE  318 (720)
T PRK13578        245 AR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDS  318 (720)
T ss_pred             cc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeC
Confidence            44 2233    354     4477777543          47888998874 699966   7888887 56777 999999


Q ss_pred             CCCCcc-CCCC--CCCCC-cccCC-CCCeEEEecCccccCCCcceeeEEEee
Q 020968          224 VYDHLA-FGNT--PFVPM-GVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       224 a~~~~~-~~~~--~~~~~-~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ||+... |...  ..+.. ..... +..++++.|.+|.  ++++.-+.++..
T Consensus       319 Ahgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LHv  368 (720)
T PRK13578        319 AWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIHK  368 (720)
T ss_pred             cchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhhc
Confidence            999743 3321  01111 11222 3457999999999  677777766543

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.41  E-value=4.9e-12  Score=115.61  Aligned_cols=185  Identities=10%  Similarity=0.039  Sum_probs=121.6

Q ss_pred             CCCcHHHHHHHHHHhhcCC-C--CCCCCC-------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHHHHHH
Q 020968           61 FRTASVAVDAIVHSVRSAR-F--NCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEVILTV  129 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~-~--~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~~~~~  129 (319)
                      .+.|+.+.+++.+.+.... .  ..|...       .-+.+.|+.++++++.     -+++++++++| +|++++.++..
T Consensus         8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~-----~~~~~vvf~~gs~T~a~~~~~~~   82 (355)
T cd00611           8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI-----PDNYKVLFLQGGATGQFAAVPLN   82 (355)
T ss_pred             CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC-----CCCceEEEEcCCchHHHHHHHHh
Confidence            4678999999998873210 0  111111       2245677777777731     14678999988 99999999999


Q ss_pred             hcC---CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC-HHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968          130 LAR---PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD-LDAVEALADENTVALVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       130 l~~---~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l  205 (319)
                      +..   +|+.|++ .+........++..|+++..++.+...++ .+ ++..+..+++++++|.+++..|.||..++    
T Consensus        83 l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~----  156 (355)
T cd00611          83 LLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD----  156 (355)
T ss_pred             cCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc----
Confidence            987   4455543 22222234477888999998887432222 13 23333445678899999999999999843    


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                          ++++.+|+++++|.+.+.    +..+..+..++     +.+.|..|.+|.+|  +|.+++..
T Consensus       157 ----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~  207 (355)
T cd00611         157 ----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK  207 (355)
T ss_pred             ----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH
Confidence                334458999999999987    33344443322     46677899987666  77777643

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PLN02590 probable tyrosine decarboxylase

Probab=99.40  E-value=5e-11  Score=113.29  Aligned_cols=202  Identities=11%  Similarity=0.052  Sum_probs=140.7

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCCHHHHHHHHHHHhcC------
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-----PDDVYLTLGCTQAIEVILTVLAR------  132 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~~~G~t~ai~~~~~~l~~------  132 (319)
                      +..+-+.+...+.... ..|...+...++++.+.+++.+.+|.+-.     ...-++++|+++++..++.+...      
T Consensus       144 ~~~lgd~l~sa~n~~~-~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~  222 (539)
T PLN02590        144 AGFLGEMLNAGLSVVG-FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKV  222 (539)
T ss_pred             HHHHHHHHHHhccccc-CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhh
Confidence            3444455555544332 24555667889999999999998875522     13457789999988776654321      


Q ss_pred             -----CCCEEEEcCCCCcchHHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcccc
Q 020968          133 -----PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGN  198 (319)
Q Consensus       133 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~  198 (319)
                           +.-.|++.+-.|.+..+.++.+|+   .++.++++..+++.+|++.|++++.+      .+.+|+.+..+..||.
T Consensus       223 g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGa  302 (539)
T PLN02590        223 GKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAA  302 (539)
T ss_pred             cccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcc
Confidence                 112455677889899999999998   47888886556789999999998853      2455666666889999


Q ss_pred             ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       199 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      +   +++++|.++|+++|+|+.+|.||+.+..--.+.. -+..+..  -.=+.-+++|++ ....-+|.+++.++
T Consensus       303 i---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~--ADSit~D~HK~l-~~p~~cg~llvr~~  371 (539)
T PLN02590        303 V---DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIEN--ADSFNMNAHKWL-FANQTCSPLWVKDR  371 (539)
T ss_pred             c---CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCcc--CCEEEECchhhc-CcCcCEEEEEecCH
Confidence            9   8899999999999999999999998652111111 1111111  124455899994 66677898888764

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.39  E-value=7.7e-11  Score=110.69  Aligned_cols=255  Identities=14%  Similarity=0.071  Sum_probs=145.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCc-EEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD-VYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~-i~~~~G~t~  121 (319)
                      .+..++||..|--...- =--.|.+.+++.+++........  .....+.+..+++.+.+..+....... +++++++++
T Consensus        37 dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsE  113 (442)
T TIGR00709        37 EGKEYLDFLAGAGTLAL-GHNHPNMKQKILDYLQSGLPLHT--LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGAD  113 (442)
T ss_pred             CCCEEEEccccHhhhcC-CCCCHHHHHHHHHHHHhccCccc--cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHH
Confidence            46778888777422111 13467899999998876331111  111235555666666553321101124 455689999


Q ss_pred             HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCC--Cc----CCH----HHH
Q 020968          122 AIEVILTVLAR--PGANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKG--WE----VDL----DAV  176 (319)
Q Consensus       122 ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~----~d~----~~l  176 (319)
                      |+..+++....  ...+|+....+|++....+.. .+.            .+..++......  +.    .+.    +.+
T Consensus       114 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (442)
T TIGR00709       114 AVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYF  193 (442)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence            99999886432  236788888888776433332 220            122222211000  00    011    113


Q ss_pred             Hhhhc------cCceEEEEcCCC-CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968          177 EALAD------ENTVALVIINPG-NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT  249 (319)
Q Consensus       177 ~~~l~------~~~~~v~l~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~  249 (319)
                      ++.+.      +++.++++.... |+...+++.+.++++.++|+++|+++|.||++.+|...|.. .....+.-.+.++ 
T Consensus       194 ~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~a~~~~gv~PDiv-  271 (442)
T TIGR00709       194 ENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTM-FAFEHAGIEPDFV-  271 (442)
T ss_pred             HHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHHcCCCCcEE-
Confidence            33332      345566666554 44445689999999999999999999999999998766632 2222233222334 


Q ss_pred             EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH-hhhhcCCcchHHHHHHHHHH--hcccccc
Q 020968          250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATFIQFLKSSRK--LKRNSFL  314 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l--~~~~~~~  314 (319)
                      +  ++|.++. |+++|++++++        + ...+.. ....+.+.+++++.++..++  ++++++.
T Consensus       272 ~--~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~  327 (442)
T TIGR00709       272 V--MSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLA  327 (442)
T ss_pred             E--EcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence            3  7999876 89999999853        2 222211 12234567888887777765  3344443

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.38  E-value=6.3e-11  Score=104.15  Aligned_cols=200  Identities=18%  Similarity=0.217  Sum_probs=121.7

Q ss_pred             HHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe---CCHHHHHHHHHHHhcCCCCEE
Q 020968           65 SVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT---LGCTQAIEVILTVLARPGANI  137 (319)
Q Consensus        65 ~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~---~G~t~ai~~~~~~l~~~gd~V  137 (319)
                      ..+++|+++.--+.    ....|+..   +.=|+.+-+.+.+.+    ..+..++-   .++|+||..++.++++|||++
T Consensus        27 ~KVL~Af~~~~vs~~hf~~tTGYGY~---D~GRd~le~iyA~vf----gaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~l   99 (403)
T PF06838_consen   27 LKVLKAFQENRVSDSHFAGTTGYGYD---DIGRDKLERIYADVF----GAEDALVRPQFVSGTHAIALALFGVLRPGDEL   99 (403)
T ss_dssp             HHHHHHHHHTT--GGGCS---TT-TT----HHHHHHHHHHHHHC----T-SEEEEETTS-SHHHHHHHHHHHH--TT-EE
T ss_pred             HHHHHHHHHcCCChhhcCCCCcCCCC---CccHHHHHHHHHHHh----CchhhhhcccccchHHHHHHHHHhcCCCCCeE
Confidence            45667776542221    12345431   233445555554433    34555553   468999999999999999999


Q ss_pred             EE-cCCCCcchHHHH----------hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC-CCccccccCHHHH
Q 020968          138 LL-PRPGFPYYEARA----------THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-GNPCGNVYTYQHL  205 (319)
Q Consensus       138 l~-~~p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p-~nptG~~~~~~~l  205 (319)
                      +. +..-|.....+.          +..|+....+++.++  ..+|++.+++++++++++|++... ..-+=..++.+++
T Consensus       100 l~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~d--g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I  177 (403)
T PF06838_consen  100 LSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTED--GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEI  177 (403)
T ss_dssp             EESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TT--SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHH
T ss_pred             EEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCC--CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHH
Confidence            85 557777766665          566788888888654  469999999999999999998854 4455567888999


Q ss_pred             HHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHH
Q 020968          206 QKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       206 ~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++++.|+.  ++++++|++|++|+-..++ .   ....   .++.+|+-|.-|.. .---||+++.        .+++
T Consensus       178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP-~---~vGA---Dl~aGSLIKNpGGgiAptGGYIaGr--------~~lV  242 (403)
T PF06838_consen  178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEP-T---EVGA---DLMAGSLIKNPGGGIAPTGGYIAGR--------KDLV  242 (403)
T ss_dssp             HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G-G---GGT----SEEEEETTSGGGTTT-SS-EEEEES--------HHHH
T ss_pred             HHHHHHHHhhCCCeEEEEeCCcceeccccCc-c---ccch---hheeccceeCCCCCccCcCCEEech--------HHHH
Confidence            9999999875  7899999999998844322 2   2222   39999999996543 1123888884        3577


Q ss_pred             HHHHHh
Q 020968          283 DSIKSF  288 (319)
Q Consensus       283 ~~~~~~  288 (319)
                      ++.-..
T Consensus       243 e~~a~R  248 (403)
T PF06838_consen  243 ERAAYR  248 (403)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            765543

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PLN02263 serine decarboxylase

Probab=99.38  E-value=2.3e-10  Score=106.28  Aligned_cols=177  Identities=16%  Similarity=0.005  Sum_probs=131.2

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLP  165 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  165 (319)
                      +..++++.+-+|+.+.+|.+-+.-.=++|+|||+++..++.+-.+  +...++++.-.|.+..+.++.+|++++.++.+ 
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d-  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL-  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence            457899999999988777542222358899999999988776643  33478889999999999999999999999985 


Q ss_pred             CCCCcCCHHHHHhhhccC---ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC-----EEEEeCCCCCccCCCCCCCC
Q 020968          166 AKGWEVDLDAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI-----MVIADEVYDHLAFGNTPFVP  237 (319)
Q Consensus       166 ~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~D~a~~~~~~~~~~~~~  237 (319)
                       .++.+|+++|++++.++   +.+|+.+.++.++|.+   +++++|.++|+++|+     |+.+|.||+++...-....+
T Consensus       209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~  284 (470)
T PLN02263        209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP  284 (470)
T ss_pred             -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence             45689999999988643   4456667778999999   889999999999996     99999999986541101111


Q ss_pred             CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ...+... -.=+.-+.+|.. ..-..+|.++..+
T Consensus       285 ~~df~~~-vDSIsvD~HK~l-~~P~~cgvll~R~  316 (470)
T PLN02263        285 KVTFKKP-IGSVSVSGHKFV-GCPMPCGVQITRM  316 (470)
T ss_pred             ccCCCcC-ccEEEECCcccc-CCCcCEEEEEEeh
Confidence            1112111 123455899994 6567789998864

>PLN02880 tyrosine decarboxylase

Probab=99.37  E-value=3.2e-11  Score=114.20  Aligned_cols=232  Identities=10%  Similarity=0.063  Sum_probs=152.0

Q ss_pred             cHHHHHHHHHHHhhhc----CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhh
Q 020968           27 TVRGVLNSLLENLNKN----DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR  102 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~  102 (319)
                      .+.++++.+.+.+...    .+|..+.+=.+.+      .++..+-+.+...+.... ..|...+...++++.+.+++.+
T Consensus        61 ~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~------~~~~~lad~l~~~~n~~~-~~~~~sp~~~~lE~~vi~wl~~  133 (490)
T PLN02880         61 TLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNS------SVAGFLGEMLSAGLNIVG-FSWITSPAATELEMIVLDWLAK  133 (490)
T ss_pred             CHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCC------cHHHHHHHHHHHhhccCC-cccccCcccHHHHHHHHHHHHH
Confidence            4555665555544222    2344444433332      223444444444443322 2344455778999999999998


Q ss_pred             hCCCCCCC-----CcEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCCcchHHHHhhCCCe---EEEEec
Q 020968          103 DLPYKLSP-----DDVYLTLGCTQAIEVILTVLAR-----------PGANILLPRPGFPYYEARATHSHLE---VRHFDL  163 (319)
Q Consensus       103 ~~g~~~~~-----~~i~~~~G~t~ai~~~~~~l~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~  163 (319)
                      .+|.+-..     ..-++|+|+|+++..++.+..+           +.-.|++.+-.|.+..+.+..+|+.   ++.|+.
T Consensus       134 l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~  213 (490)
T PLN02880        134 LLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKT  213 (490)
T ss_pred             HhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeec
Confidence            87754221     2467889999998776654321           1124556778899999999999995   678888


Q ss_pred             cCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-C
Q 020968          164 LPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-V  236 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~  236 (319)
                      +..+++.+|++.|++.+.+      .+.+|+.+-.+..||.+   .++++|+++|+++|+|+++|.||+.+..--... .
T Consensus       214 d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai---Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~  290 (490)
T PLN02880        214 DSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV---DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRH  290 (490)
T ss_pred             CCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc---CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH
Confidence            7656789999999998853      24456666668899999   559999999999999999999999864311010 0


Q ss_pred             CCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          237 PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       237 ~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+..+.  .-.-+..+++|++ .....+|.+.+.+
T Consensus       291 ~l~gie--~aDSit~d~HKwl-~~P~~~g~llvr~  322 (490)
T PLN02880        291 YIDGVE--EADSFNMNAHKWF-LTNFDCSLLWVKD  322 (490)
T ss_pred             HhcCch--hcCEEEECchhhc-CCCccEEEEEEeC
Confidence            111111  1126777999995 6667789998875

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.35  E-value=2.6e-11  Score=117.41  Aligned_cols=189  Identities=14%  Similarity=0.085  Sum_probs=131.1

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      +..-..+..+..|+.++       .....++++|+|.++..++.+++.+||+|++...+|.+....+...|+.++++...
T Consensus       193 ~~G~i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~  265 (714)
T PRK15400        193 HSGPHKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPT  265 (714)
T ss_pred             CChHHHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence            34334566777777663       24578999999999999999999999999999999999888999999999988754


Q ss_pred             CCCCC----cCC-----HHHHHhhhccC-----ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc-
Q 020968          165 PAKGW----EVD-----LDAVEALADEN-----TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA-  229 (319)
Q Consensus       165 ~~~~~----~~d-----~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~-  229 (319)
                      . +.+    .++     .+.+++.+...     ++.+++++|+ -.|.+++   +++|++.|+.++  |++||||+.+. 
T Consensus       266 r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~  338 (714)
T PRK15400        266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN  338 (714)
T ss_pred             c-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhc
Confidence            3 233    234     78888887542     2268888884 5799976   677788887776  68999999753 


Q ss_pred             CCCC--CCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          230 FGNT--PFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       230 ~~~~--~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                      |...  +..++..- .+++.++++.|.+|.  ++|+.-+.++.-+.  ...+..+.+.+..+.++
T Consensus       339 F~p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg--~vd~~~~n~a~~m~~ST  399 (714)
T PRK15400        339 FSPIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKG--DVNEETFNEAYMMHTTT  399 (714)
T ss_pred             cCcccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcC--CCCHHHHHHHHHHHcCC
Confidence            3321  11222211 122457999999999  67776666543322  23334555555555554

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.34  E-value=2e-10  Score=107.41  Aligned_cols=222  Identities=17%  Similarity=0.139  Sum_probs=129.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEE-eCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYL-TLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~-~~G~t  120 (319)
                      .+..++||..|--.... ---+|.+.+++++++...... ... ....+.+..+++.+.+....+-..+ .+++ +++++
T Consensus        37 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~-~~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs  113 (425)
T PRK09264         37 DGKEYIDFFAGAGALNY-GHNNPVLKQALIDYLQRDGIT-HGL-DMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGT  113 (425)
T ss_pred             CCCEeeecccchhhccC-CCCCHHHHHHHHHHHHhcccc-ccc-ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHH
Confidence            36678888777422111 134688999999888752211 111 1122444555555544211011122 5656 58999


Q ss_pred             HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCCCCc-CCHHHHHhhhcc--
Q 020968          121 QAIEVILTVLAR--PGANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGWE-VDLDAVEALADE--  182 (319)
Q Consensus       121 ~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~-~d~~~l~~~l~~--  182 (319)
                      +|+..+++....  ...+|+....+|++....+... +.            .+..++........ -|++.+++.+..  
T Consensus       114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~  193 (425)
T PRK09264        114 NAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSS  193 (425)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhcc
Confidence            999999886532  2367888888887754322211 10            12233321100000 256777777742  


Q ss_pred             ----CceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968          183 ----NTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW  257 (319)
Q Consensus       183 ----~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~  257 (319)
                          +..+|++.......|. +++.+.+++|.++|++||+++|+||++.++...|..+ ....+.-.+.+   .+++|.+
T Consensus       194 ~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K~l  269 (425)
T PRK09264        194 SGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSKSI  269 (425)
T ss_pred             CCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEecccc
Confidence                2345555544555675 6788899999999999999999999998875544321 11112212223   3668998


Q ss_pred             CCCcceeeEEEeeC
Q 020968          258 IVPGWRLGWLVTSD  271 (319)
Q Consensus       258 ~~~G~r~G~i~~~~  271 (319)
                      +..|+++|++++++
T Consensus       270 ~~~G~pigav~~~~  283 (425)
T PRK09264        270 SGYGLPMALVLIKP  283 (425)
T ss_pred             CCCccceEEEEEch
Confidence            76699999999864

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.34  E-value=1.7e-11  Score=112.97  Aligned_cols=189  Identities=15%  Similarity=0.059  Sum_probs=124.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHH-HHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC-CHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASV-AVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GCT  120 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~-~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~-G~t  120 (319)
                      +...+|+.|-      ..+++. +++++.+......  ++++  ..-+.+.|+.++++++    .. +.++|++++ ++|
T Consensus        11 ~~~~~f~~Gp------~~~~~~~v~~a~~~~~~~~~--hr~~~f~~~~~~~r~~l~~l~~----~~-~~~~v~~~~gs~T   77 (378)
T PRK03080         11 PADPRFSSGP------CKKRPGWQLEALADALLGRS--HRQKPVKALLKRVIEGTRELLS----LP-EGYEVGIVPGSDT   77 (378)
T ss_pred             CCCCCcCCCC------cCCChHHHHHHHHhhhcccC--cCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEEECCchH
Confidence            3345566665      245566 9998886543211  2222  2234566666776662    11 345788875 899


Q ss_pred             HHHHHHHHHhcCC-CCEEEEcCCCCcc-hHH-HHhhCCC-eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968          121 QAIEVILTVLARP-GANILLPRPGFPY-YEA-RATHSHL-EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC  196 (319)
Q Consensus       121 ~ai~~~~~~l~~~-gd~Vl~~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt  196 (319)
                      .+++.++.++.++ ++.|+. .-.|.. +.. .++..|. ++..++.+  .+..+|+++++.     ++.|.+++..|.|
T Consensus        78 ~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~t  149 (378)
T PRK03080         78 GAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTT  149 (378)
T ss_pred             HHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCcc
Confidence            9999999999874 444444 445543 333 3356788 88888764  333567666432     4568899999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC-CcceeeEEEee
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTS  270 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~  270 (319)
                      |...+   +++|++  +++|+++++|.+++.    +..+..+..+     .+++.|..|+++. +|  +|++.+.
T Consensus       150 G~~~p---i~~I~~--~~~g~~~vVDa~qs~----G~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~  208 (378)
T PRK03080        150 GVRVP---VARWIG--ADREGLTICDATSAA----FALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILS  208 (378)
T ss_pred             ceecc---chhhcc--ccCCCeEEEeccccc----ccCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEEC
Confidence            99977   666666  778999999999887    3334444432     3899999999765 56  6777664

>PLN02271 serine hydroxymethyltransferase

Probab=99.34  E-value=1.1e-09  Score=102.79  Aligned_cols=207  Identities=14%  Similarity=0.085  Sum_probs=137.1

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC------CCCcCCHHHHHHHHHHHhhhCCCCCC-C-CcEEEe
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY------SSTVGILPARRAIADYLNRDLPYKLS-P-DDVYLT  116 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~-~-~~i~~~  116 (319)
                      ..-|+|-..+      -.+.+.+.+++-..+......+|      +.....++++....++..+.+|.... . .+|-..
T Consensus       148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~  221 (586)
T PLN02271        148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY  221 (586)
T ss_pred             hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence            4566776555      24568888887665544332233      33334557776666776666653321 1 344444


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHhhCCCeEEEEe--ccCCCCCcCCHHHHHh-hhccCc
Q 020968          117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEA---------RATHSHLEVRHFD--LLPAKGWEVDLDAVEA-LADENT  184 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~---------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~-~l~~~~  184 (319)
                       +++.|+.+++.++++|||+|+..+..|.++..         .+...|..+..++  .++ +...+|.+++++ +...++
T Consensus       222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~-~~g~IDyd~lek~a~~~rP  299 (586)
T PLN02271        222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNP-QTGYIDYDKLEEKALDFRP  299 (586)
T ss_pred             -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccc-ccCccCHHHHHHHhhhcCC
Confidence             67888999999999999999998877765432         2234565544444  433 345799999998 567789


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC-CCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      ++|++....+|  ..++   ++++.++|+++|+++++|.++..-.. .+..+.++. .    -.++.+|.+|++  .|-|
T Consensus       300 KLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~----aDvvt~TTHKtL--rGPr  367 (586)
T PLN02271        300 KILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-Y----CDIVTSTTHKSL--RGPR  367 (586)
T ss_pred             eEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-C----CcEEEeCCcccC--CCCC
Confidence            99998877888  4444   88889999999999999999986433 222222222 1    238999999995  5556


Q ss_pred             eeEEEeeC
Q 020968          264 LGWLVTSD  271 (319)
Q Consensus       264 ~G~i~~~~  271 (319)
                      -|.+.+.+
T Consensus       368 GG~I~~r~  375 (586)
T PLN02271        368 GGIIFYRK  375 (586)
T ss_pred             ceEEEecc
Confidence            68888743

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.32  E-value=1.2e-10  Score=112.77  Aligned_cols=188  Identities=15%  Similarity=0.083  Sum_probs=128.5

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      +..-..+..+.+|+.++       .....++++|+|.++..++.+++.+||+|++...+|.+....+...|+.++++...
T Consensus       193 ~~G~i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~  265 (713)
T PRK15399        193 HTGPHLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPT  265 (713)
T ss_pred             CChHHHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEeccc
Confidence            34334566677777763       24578999999999999999999999999999999999888999999999988754


Q ss_pred             CCCCC----cCCH-----HHHHhhhcc-----CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEE-EEeCCCCCcc
Q 020968          165 PAKGW----EVDL-----DAVEALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV-IADEVYDHLA  229 (319)
Q Consensus       165 ~~~~~----~~d~-----~~l~~~l~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~D~a~~~~~  229 (319)
                      . +.+    .++.     +.+++.+.+     +++++++++|+ -.|.+++   +++|++.|   |+.+ ++||||+.+.
T Consensus       266 ~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~  337 (713)
T PRK15399        266 R-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYT  337 (713)
T ss_pred             c-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhh
Confidence            3 233    2344     888888753     23578889884 5799977   55666666   4555 6999999743


Q ss_pred             -CCCC-C-CCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          230 -FGNT-P-FVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       230 -~~~~-~-~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                       |... + ..++... ..+..++++.|.+|.  ++++.-+.++.-+.  ...+..+.+.+..+.++
T Consensus       338 ~F~p~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk~--~vd~~~~n~a~~m~~ST  399 (713)
T PRK15399        338 HFHPIYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIKG--EYDEETFNEAFMMHTST  399 (713)
T ss_pred             hcCcccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeecC--CCCHHHHHHHHHHHcCC
Confidence             3221 1 1222211 123345779999999  67777776654332  23344555556555554

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.32  E-value=3.4e-10  Score=106.31  Aligned_cols=256  Identities=15%  Similarity=0.126  Sum_probs=144.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--..... --.|.+.+++.++++....  +.......+....+++.+.+..+.. ..+.+++++++++|
T Consensus        40 dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGseA  115 (445)
T PRK08593         40 DGKTYIDLLASASSQNVG-HAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGSDA  115 (445)
T ss_pred             CCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHH
Confidence            366788887663221111 2468999999998876432  1111112234444555554432211 12589999999999


Q ss_pred             HHHHHHHhcC-C-CCEEEEcCCCCcchHHHHh-hCCC-------------eEEEEeccCCCC--Cc-CC-------HHHH
Q 020968          123 IEVILTVLAR-P-GANILLPRPGFPYYEARAT-HSHL-------------EVRHFDLLPAKG--WE-VD-------LDAV  176 (319)
Q Consensus       123 i~~~~~~l~~-~-gd~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~-~d-------~~~l  176 (319)
                      +..+++.... . ..+|+.....|++....+. ..+.             .+..++......  +. .+       ++.+
T Consensus       116 ~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  195 (445)
T PRK08593        116 NDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPL  195 (445)
T ss_pred             HHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHH
Confidence            9999885421 2 3578888888876532222 1111             122233211100  00 01       1344


Q ss_pred             Hhhhc-----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          177 EALAD-----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       177 ~~~l~-----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      ++.+.     ++..+|++.......|.+ .+.+-++++.++|+++|+++|+||++..+...|... ....+.-.+.   +
T Consensus       196 ~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD---i  271 (445)
T PRK08593        196 KEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD---L  271 (445)
T ss_pred             HHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC---E
Confidence            44332     345566666666677875 688889999999999999999999998875544321 1111221122   2


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH--hccccccc
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      -+++|.++ .|+++|+++++.        ++.+.+..... .+...+++...+....+  ++++++.+
T Consensus       272 ~t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~  330 (445)
T PRK08593        272 MSFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQ  330 (445)
T ss_pred             eeeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence            37899975 679999999853        46665542221 23445666666554443  34444433

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.31  E-value=9.2e-10  Score=103.89  Aligned_cols=206  Identities=14%  Similarity=0.081  Sum_probs=124.2

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---  115 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~---  115 (319)
                      .+-|+|-..+      -...+.+.+++...+......+      |+-...++++++...+...+.++  ...+.+.+   
T Consensus        34 ~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~  105 (475)
T PLN03226         34 WKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQ  105 (475)
T ss_pred             HcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecC
Confidence            5667776665      2567888888888773322112      22233445665544444444333  23344433   


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCC---CCcchHHHH---hhCCCeEE----EEeccCCCCCcCCHHHHHhhhcc-Cc
Q 020968          116 TLGCTQAIEVILTVLARPGANILLPRP---GFPYYEARA---THSHLEVR----HFDLLPAKGWEVDLDAVEALADE-NT  184 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p---~~~~~~~~~---~~~g~~~~----~~~~~~~~~~~~d~~~l~~~l~~-~~  184 (319)
                      ..+|+.|+..++.+++++||+|+..+.   .|..+....   +..+....    ++..++ ++..+|++++++.+.. ++
T Consensus       106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~p  184 (475)
T PLN03226        106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRP  184 (475)
T ss_pred             cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCC
Confidence            367788999999999999999998542   333322211   11122211    333333 4457999999998863 56


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-CCCcccCCCCCeEEEecCccccCCCcce
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      ++|++ ..++ +|...+   +++|.++|+++|+++++|++|..-....... .++   .  ...++++|++|++.  |-+
T Consensus       185 klIv~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~---~--~~Div~~t~hK~L~--GP~  252 (475)
T PLN03226        185 KLIIA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPF---E--YCDVVTTTTHKSLR--GPR  252 (475)
T ss_pred             eEEEE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC---C--CCeEEEecCccccc--CCC
Confidence            65554 3333 566644   7788899999999999999998644322111 111   1  12388999999963  333


Q ss_pred             eeEEEeeC
Q 020968          264 LGWLVTSD  271 (319)
Q Consensus       264 ~G~i~~~~  271 (319)
                      -|++++.+
T Consensus       253 Gg~I~~~~  260 (475)
T PLN03226        253 GGMIFFRK  260 (475)
T ss_pred             ceEEEEch
Confidence            38887743

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.31  E-value=3.1e-10  Score=105.68  Aligned_cols=220  Identities=16%  Similarity=0.104  Sum_probs=130.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhC--CCCCCCCcEEE-eCCH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL--PYKLSPDDVYL-TLGC  119 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~--g~~~~~~~i~~-~~G~  119 (319)
                      .+..++||..|--...- =--.|.+.+++++++...... .. .....+.+..+++.+.+..  +... .+.+++ ++++
T Consensus        33 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~-~~-~~~~~~~~~~lae~l~~~~~~~~~~-~~~~~f~~~sG  108 (412)
T TIGR02407        33 DGKEYIDFFAGAGALNY-GHNNPKLKQALIDYLADDGII-HS-LDMATEAKREFLETFNEIILKPRGL-DYKVQFPGPTG  108 (412)
T ss_pred             CCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhccce-ec-cccCcHHHHHHHHHHHHhccCccCC-CceEEEeCCCc
Confidence            36678888777422111 134688999999988642211 11 1112344555666654421  1011 124655 5899


Q ss_pred             HHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccCCCCC-cCCHHHHHhhhc--
Q 020968          120 TQAIEVILTVLAR--PGANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLPAKGW-EVDLDAVEALAD--  181 (319)
Q Consensus       120 t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~~~~-~~d~~~l~~~l~--  181 (319)
                      ++|+..+++....  ...+|+....+|++....+. ..+.            .+..+|....... .-+++.+++.+.  
T Consensus       109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~  188 (412)
T TIGR02407       109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS  188 (412)
T ss_pred             hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence            9999999886532  23678888888877543322 2121            1122222100000 013566777775  


Q ss_pred             ----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCcc
Q 020968          182 ----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       182 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK  255 (319)
                          +++.+|++....++.|. +.+.+.+++|.++|+++|+++|+||++.++...|..... ...+.+  . ++  +++|
T Consensus       189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~P--D-i~--~~~K  263 (412)
T TIGR02407       189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEP--D-IV--CLSK  263 (412)
T ss_pred             cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCC--C-EE--Eech
Confidence                23456665555778887 678888999999999999999999999877544432111 112222  2 32  5789


Q ss_pred             ccCCCcceeeEEEeeC
Q 020968          256 RWIVPGWRLGWLVTSD  271 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~  271 (319)
                      .++..|+++|++++++
T Consensus       264 ~lg~~G~pigav~~~~  279 (412)
T TIGR02407       264 SISGYGLPLALTLIKP  279 (412)
T ss_pred             hccCCccceeEEEEch
Confidence            9644399999999864

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.31  E-value=6.8e-12  Score=99.85  Aligned_cols=98  Identities=24%  Similarity=0.431  Sum_probs=77.1

Q ss_pred             CCCCeEeccCCCCCC-------------CCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCC--CC
Q 020968           43 DTRPLIPLGHGDPSA-------------FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLP--YK  107 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~-------------~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~  107 (319)
                      ++.++|+|+..+..+             .+.+..++.+.+++.+.      ..|.+..|.++||+++++|+.+.+|  ..
T Consensus        41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~  114 (153)
T PLN02994         41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRVK  114 (153)
T ss_pred             CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCCc
Confidence            345688888876410             02234445545555442      2488888999999999999999888  67


Q ss_pred             CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 020968          108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY  146 (319)
Q Consensus       108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~  146 (319)
                      +++++|++|+|+++++..++..++++||.|+++.|+|+.
T Consensus       115 ~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994        115 FDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             cchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence            889999999999999999999999999999999999963

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.30  E-value=2.4e-10  Score=113.69  Aligned_cols=174  Identities=14%  Similarity=0.144  Sum_probs=120.4

Q ss_pred             CCCCCC---cCCHHHHHHHHHHHhhhCCCCCCCCcE-EEeCCHHHHHHHHHHHhcC--------CCCEEEEcCCCCcchH
Q 020968           81 NCYSST---VGILPARRAIADYLNRDLPYKLSPDDV-YLTLGCTQAIEVILTVLAR--------PGANILLPRPGFPYYE  148 (319)
Q Consensus        81 ~~Y~~~---~g~~~lr~~ia~~~~~~~g~~~~~~~i-~~~~G~t~ai~~~~~~l~~--------~gd~Vl~~~p~~~~~~  148 (319)
                      +.|.|.   .|..++...+.+++.+..|.  +  ++ +..+|+.+|-...+.++..        ..++|+++...|....
T Consensus       517 hPyqPe~~sqG~lq~i~elq~~l~eltGm--d--~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP  592 (939)
T TIGR00461       517 HPFQPSNQVEGYQELIAQLEKWLCSITGF--D--AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP  592 (939)
T ss_pred             CCCCchHHhHHHHHHHHHHHHHHHHHHCC--C--CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence            355543   34445555556666555443  3  33 3344455555444433321        2367899999997777


Q ss_pred             HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCC
Q 020968          149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEV  224 (319)
Q Consensus       149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a  224 (319)
                      ..++..|++++.++.+  .++.+|+++|++.++   +++++|++++|+| +|.+   ++ +++|+++|+++|.++++|.+
T Consensus       593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgA  666 (939)
T TIGR00461       593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGA  666 (939)
T ss_pred             HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEec
Confidence            8899999999999985  345799999999997   3788999999999 7887   45 99999999999999999999


Q ss_pred             CCCccCCCCCCCCCcccCCCCCeEEEecCccccCC----CcceeeEEEee
Q 020968          225 YDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTS  270 (319)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~----~G~r~G~i~~~  270 (319)
                      +..-..      .+......+-.++++|.+|+|+.    .|-.+|.+.+.
T Consensus       667 q~~al~------~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr  710 (939)
T TIGR00461       667 NMNAQV------GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK  710 (939)
T ss_pred             ChhhCC------CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEh
Confidence            865111      11111222234999999998763    46678998875

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.30  E-value=2.6e-10  Score=104.55  Aligned_cols=198  Identities=19%  Similarity=0.141  Sum_probs=131.6

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCCHHHHHHHHHHHhcC-------
Q 020968           65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-----PDDVYLTLGCTQAIEVILTVLAR-------  132 (319)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~~~G~t~ai~~~~~~l~~-------  132 (319)
                      .-+-+.+...+... ...|...+...++++.+.+++.+.+|.+-.     ...=++|+|+|+++..++.+..+       
T Consensus        54 ~i~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~  132 (373)
T PF00282_consen   54 SILADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSK  132 (373)
T ss_dssp             HHHHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhh
Confidence            34444555555443 335555556789999999999998886621     23568999999999877654421       


Q ss_pred             -CC-----C-EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---C--ce-EEEEcCCCCccccc
Q 020968          133 -PG-----A-NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---N--TV-ALVIINPGNPCGNV  199 (319)
Q Consensus       133 -~g-----d-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~--~~-~v~l~~p~nptG~~  199 (319)
                       .|     . .|++.+-.|.+..+.+..+|+.++.|++++  ++.+|+++|++.+..   +  +. +|+.+..+..+|.+
T Consensus       133 ~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~  210 (373)
T PF00282_consen  133 AKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI  210 (373)
T ss_dssp             HHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB
T ss_pred             hcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc
Confidence             12     2 466667788889999999999999999875  567999999998753   2  23 45566778899999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccC--CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                         +++++|.++|+++++|+.+|.+|++..+  ..... ....+..  -.=+.-+++|+++ .-..+|+++..++
T Consensus       211 ---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~-~~~gi~~--adSit~d~HK~l~-~P~~~~~~l~r~~  278 (373)
T PF00282_consen  211 ---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH-LLFGIER--ADSITIDPHKWLG-VPYGCGVLLVRDK  278 (373)
T ss_dssp             ----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG-GGTTGGG--ESEEEEETTTTTS--SSS-EEEEESSG
T ss_pred             ---cCHHHHhhhccccceeeeecccccccccccccccc-ccccccc--ccccccchhhhhc-CCccceeEEeecc
Confidence               8899999999999999999999998322  11111 1111111  1134448999964 4568999988764

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PRK06541 hypothetical protein; Provisional

Probab=99.29  E-value=7.7e-10  Score=104.26  Aligned_cols=219  Identities=17%  Similarity=0.172  Sum_probs=129.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--.... ---.|.+.+++.+++....+  +.......+.+..+++.+.+..+  -+.+.+++++++++|
T Consensus        50 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA  124 (460)
T PRK06541         50 RGKRYLDGLAGLFVVQV-GHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSEA  124 (460)
T ss_pred             CCCEEEECCccHHhccC-CCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHHH
Confidence            46778888777321111 13358899999998876421  11111122444445555544322  124689999999999


Q ss_pred             HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccCCCC---CcCC------
Q 020968          123 IEVILTVLAR--------PGANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLPAKG---WEVD------  172 (319)
Q Consensus       123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~~~---~~~d------  172 (319)
                      +..+++....        ...+|+...-+|++....+. ..|.            .+..++......   +.-+      
T Consensus       125 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (460)
T PRK06541        125 VESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGR  204 (460)
T ss_pred             HHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHH
Confidence            9998875431        13678888888876533222 1111            112222111000   1112      


Q ss_pred             --HHHHHhhhc---cCceEEEEcCC-CCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          173 --LDAVEALAD---ENTVALVIINP-GNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       173 --~~~l~~~l~---~~~~~v~l~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                        ++.+++.+.   .+..+.++.-| .++.|.+.+ .+.++++.++|+++|+++|+||++.++...+... ....++-.+
T Consensus       205 ~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~P  283 (460)
T PRK06541        205 WAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYVP  283 (460)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCCC
Confidence              256676664   23345555556 888898754 7779999999999999999999997764333321 111122112


Q ss_pred             CeEEEecCccccCCCcc-eeeEEEeeC
Q 020968          246 PVLTLGSISKRWIVPGW-RLGWLVTSD  271 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~-r~G~i~~~~  271 (319)
                      .++   +++|.++ .|+ ++|++++++
T Consensus       284 Div---t~gK~l~-~G~~pigav~~~~  306 (460)
T PRK06541        284 DII---TCAKGIT-SGYSPLGAMIASD  306 (460)
T ss_pred             CEE---Eeccccc-CCccceeEEEEcH
Confidence            233   4899975 786 999999854

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.28  E-value=3.4e-10  Score=103.38  Aligned_cols=241  Identities=14%  Similarity=0.135  Sum_probs=146.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--...- ---.|.+.++++++++....  +.+. ...+.+..+++.+.+..    ..+.+++++++++|
T Consensus        22 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~SGseA   93 (364)
T PRK04013         22 QGRRYLDLIAGIGVNVL-GHNHPEWVEEMSEQLEKLVV--AGPM-FEHEEKEEMLEELSKWV----NYEYVYMGNSGTEA   93 (364)
T ss_pred             CCCEEEEcccChhhccC-CCCCHHHHHHHHHHHHhcCC--ccCC-cCCHHHHHHHHHHHhhc----CCCEEEEeCchHHH
Confidence            46778888776422111 12347888999998876321  1111 11233444455444322    34689999999999


Q ss_pred             HHHHHHHhc-CCC-CEEEEcCCCCcchHHHHhh-CC-------Ce-----EEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          123 IEVILTVLA-RPG-ANILLPRPGFPYYEARATH-SH-------LE-----VRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       123 i~~~~~~l~-~~g-d~Vl~~~p~~~~~~~~~~~-~g-------~~-----~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      +..+++... .+| ++|+....+|++....+.. .+       ..     +..++.       .|++.+++.+.+++++|
T Consensus        94 ~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~~aAv  166 (364)
T PRK04013         94 VEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAITKETAAV  166 (364)
T ss_pred             HHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhcCCcEEE
Confidence            999998763 245 8899998888775432222 11       11     111111       26788888887778888


Q ss_pred             EEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968          188 VIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       188 ~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      ++.......|. ..+.+-++++.++|+++|+++|+||++.++ ..|.. .....+.-.+.++   +++|.++. |+.+|.
T Consensus       167 ivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~-~a~~~~gv~PDiv---~~gK~lgg-G~P~~a  240 (364)
T PRK04013        167 IFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKF-LAIEHYKVEPDIV---TMGKGIGN-GVPVSL  240 (364)
T ss_pred             EEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCch-hHHHhcCCCCCEE---EecccccC-CceeEE
Confidence            77766655565 446677999999999999999999999987 55532 2222233223344   45999654 799999


Q ss_pred             EEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       267 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      ++...+        + ..  .....+.+.++++..+....+  ++++++.+
T Consensus       241 ~~~~~~--------~-~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~  280 (364)
T PRK04013        241 TLTNFD--------V-ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVE  280 (364)
T ss_pred             EEeccc--------c-cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHH
Confidence            987542        2 11  112223445666666555543  44555443

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.26  E-value=4.7e-10  Score=102.29  Aligned_cols=226  Identities=19%  Similarity=0.179  Sum_probs=133.6

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---  115 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~---  115 (319)
                      .+-|+|-..+.      .+.|.+.+++...+.......      |+.....+++++...++..+.+|..  ++...+   
T Consensus        20 ~~~l~LiaSEN------~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~--~~~w~anvq   91 (399)
T PF00464_consen   20 RSTLNLIASEN------YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE--PKEWYANVQ   91 (399)
T ss_dssp             HHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S--TTTEEEE--
T ss_pred             hcCccccCccc------ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC--cccceEEee
Confidence            46688877762      456777777765554332222      2223334567666667766666543  333322   


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHH-------hhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-Cc
Q 020968          116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYE---ARA-------THSHLEVRHFDLLPAKGWEVDLDAVEALADE-NT  184 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~-------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~  184 (319)
                      ..+++.|+..++.+|+++||+|+..++.+.++.   ...       .....+.+.++++++ ...+|.+++++.+.. ++
T Consensus        92 p~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kP  170 (399)
T PF00464_consen   92 PHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKP  170 (399)
T ss_dssp             -SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--
T ss_pred             cCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCC
Confidence            356788999999999999999998876654332   111       223456777887653 468999999998764 78


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      ++|++.....|-=     -+++++.++|++.|.+++.|.+|.. ++-+|.-+.|+. ..    .|+.+|.+|+  ++|-|
T Consensus       171 klIi~G~S~y~~~-----~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~-~A----Dvvt~sThKt--l~GPr  238 (399)
T PF00464_consen  171 KLIICGASSYPRP-----IDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP-YA----DVVTGSTHKT--LRGPR  238 (399)
T ss_dssp             SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC-TS----SEEEEESSGG--G-SSS
T ss_pred             CEEEECchhccCc-----cCHHHHHHHHHhcCcEEEecccccccceehheecCccc-cc----eEEEeecccc--ccccC
Confidence            8888776555432     3488999999999999999999984 555554444543 22    2999999999  58888


Q ss_pred             eeEEEee------CCCCCccchHHHHHHHHhhhh
Q 020968          264 LGWLVTS------DPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       264 ~G~i~~~------~~~~~~~~~~~~~~~~~~~~~  291 (319)
                      -|.|++.      ++.....++++.+++....-.
T Consensus       239 ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP  272 (399)
T PF00464_consen  239 GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFP  272 (399)
T ss_dssp             -EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTT
T ss_pred             ceEEEEcCCccccCCcccccHHHHHHHhccccCC
Confidence            9999986      111122235688888876543

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.26  E-value=1.2e-09  Score=100.62  Aligned_cols=247  Identities=15%  Similarity=0.098  Sum_probs=147.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+|||..|.....- =-..|.+.+|+++++.......+..  ...+-...+++.+....... ..+.+++++++++|
T Consensus        54 dG~~ylDf~sgi~v~~~-GH~hP~Vv~Av~~q~~~~~h~~~~~--~~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA  129 (447)
T COG0160          54 DGNEYLDFLSGIAVLNL-GHNHPRVVEAVKRQLAKLNHTHTRD--LYYEPYVELAEKLTALAPGS-GLKKVFFGNSGAEA  129 (447)
T ss_pred             CCCEEEEcccCcchhcc-CCCCHHHHHHHHHHHHHhhcccCCc--ccchhHHHHHHHHHHhCCcc-cCCeEEecCCcHHH
Confidence            46778899886432111 2457899999999887744222222  11144445555554432211 45689999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchH-HHHhhCCC-------------eEEEEeccCCC--CCcC--------CHHHH
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYE-ARATHSHL-------------EVRHFDLLPAK--GWEV--------DLDAV  176 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~-------------~~~~~~~~~~~--~~~~--------d~~~l  176 (319)
                      +..+++.-.  .....|+.....|++.- ......|.             .++.+|....-  .+..        ..+.+
T Consensus       130 ~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~  209 (447)
T COG0160         130 VEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYI  209 (447)
T ss_pred             HHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHH
Confidence            999988643  23467888777776532 22221111             24444432211  1111        22334


Q ss_pred             Hhhhc------cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968          177 EALAD------ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT  249 (319)
Q Consensus       177 ~~~l~------~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~  249 (319)
                      +..+.      .++.++++.......|. +.|..-++++.++|++||+++|.||++.++..+| ....+..+.-.+.+| 
T Consensus       210 e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDiv-  287 (447)
T COG0160         210 ERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIV-  287 (447)
T ss_pred             HHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCEE-
Confidence            44332      13456666666777785 5566669999999999999999999999998877 333443333323344 


Q ss_pred             EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH-hhhhcCCcchHHHHHHHHHH
Q 020968          250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l  307 (319)
                        +++|.++. |+.+|.++...        ++.+ ... ....+...++++..+....+
T Consensus       288 --t~aK~ig~-G~Pl~avv~r~--------ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL  334 (447)
T COG0160         288 --TLAKSLGG-GLPLSAVVGRA--------EIMD-WPPGGHGGTFGGNPVACAAALAVL  334 (447)
T ss_pred             --EecccccC-CCceeEEeccH--------Hhcc-cCCcccCCCCCcCHHHHHHHHHHH
Confidence              67999755 99999999843        3444 222 12223455666665554433

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.25  E-value=1.1e-09  Score=104.18  Aligned_cols=183  Identities=17%  Similarity=0.175  Sum_probs=126.0

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCC----------C-CCCcEEEeCCHHHHHHHHHHHhcC------------------
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYK----------L-SPDDVYLTLGCTQAIEVILTVLAR------------------  132 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~----------~-~~~~i~~~~G~t~ai~~~~~~l~~------------------  132 (319)
                      .+...+...++++.+.+++.+..+..          . +...-++|+|+|+|+..++.+-.+                  
T Consensus       120 ~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~  199 (522)
T TIGR03799       120 KIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLF  199 (522)
T ss_pred             eeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccch
Confidence            44455577899999999987754310          1 112357799999988776654321                  


Q ss_pred             --------CCCEEEEcCCCCcchHHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEc--CCCCc
Q 020968          133 --------PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVII--NPGNP  195 (319)
Q Consensus       133 --------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~--~p~np  195 (319)
                              ++..|++..-.|.+..+.++.+|+   +++.++++.  ++.+|++.|++.++    .+++.++++  ..++.
T Consensus       200 ~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~  277 (522)
T TIGR03799       200 AALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE  277 (522)
T ss_pred             hhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence                    134688888999999999999998   688888853  46899999999885    344444444  55779


Q ss_pred             cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-CCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ||.+   .++++|+++|+++|+++++|.+|+....--... ..+..+.  .-..+..|.+|++..| ..+|.+++.++
T Consensus       278 tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle--~aDSit~d~HK~l~~P-~g~G~llvr~~  349 (522)
T TIGR03799       278 TGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIE--RADSVTIDAHKQLYVP-MGAGMVLFKDP  349 (522)
T ss_pred             CCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCch--hCCEEEEChhhcCCcC-cccEEEEEeCH
Confidence            9999   569999999999999999999998643210000 0011111  1237778999985444 55888888653

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.24  E-value=4.3e-10  Score=102.35  Aligned_cols=186  Identities=12%  Similarity=0.009  Sum_probs=123.3

Q ss_pred             CcHHHHHHHHHHhhcCC---CCCCCCCcCCH---HHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHHHHHHhcCCCC
Q 020968           63 TASVAVDAIVHSVRSAR---FNCYSSTVGIL---PARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEVILTVLARPGA  135 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~---~~~Y~~~~g~~---~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~~~~~l~~~gd  135 (319)
                      .|..+.+++.+.+....   ...|....-.+   ++-+.+.+.+.+.++.. +..++++++| +|.|+++++..+..+|+
T Consensus         3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~~   81 (349)
T TIGR01364         3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEGK   81 (349)
T ss_pred             CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            56788888888776321   11222111122   33333444444444421 3346888777 99999999999998999


Q ss_pred             EEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCC--CCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHH
Q 020968          136 NILLPRPGFPY--YEARATHSHLEVRHFDLLPAK--GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET  211 (319)
Q Consensus       136 ~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~  211 (319)
                      ++++...+..+  +..+++..|+ +..+..++..  +-.+++++++  ++++++.|.+++..+.||+..+        ++
T Consensus        82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l  150 (349)
T TIGR01364        82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL  150 (349)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence            98877655543  5688889998 7766653221  1134555554  3457889999999999999854        55


Q ss_pred             HHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       212 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ++.+++++++|.+.+-    +..+..+..+   +  +++.|..|.++.||  +|++.+++
T Consensus       151 ~~~~~~l~iVDavss~----g~~~id~~~~---d--~~~~ssqK~lgP~G--lg~l~~s~  199 (349)
T TIGR01364       151 PDVKNAPLVADMSSNI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTVVIVRK  199 (349)
T ss_pred             cccCCCeEEEEccccc----cCccCCHHHc---c--EEEEecccccCCCc--eEEEEECH
Confidence            6667999999999987    3334444432   2  88999999998777  77777643

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.24  E-value=1.2e-10  Score=99.03  Aligned_cols=201  Identities=14%  Similarity=0.085  Sum_probs=140.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ...+++|+.++.   ..+...|++.++-++++.....      .-.+....+..|+..+|++.        ..++.++.+
T Consensus        66 ~k~ilnFcaNnY---LGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh--------~rED~ilyp  134 (417)
T KOG1359|consen   66 DKKILNFCANNY---LGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH--------GREDTILYP  134 (417)
T ss_pred             ccceeeeccccc---ccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh--------CCCceEEec
Confidence            556889998883   4467788999988888765321      01122234678888888887        467899999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPG  193 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~  193 (319)
                      .+..|+..++.++..|.|.|+.....|.+...-.+... +          -..+|+-.++..+.+    +-++|+-...-
T Consensus       135 scfdANag~feail~pedAvfSDeLNhASIIdGirLck-r----------y~h~dv~~l~~~l~~a~k~r~klv~TDg~F  203 (417)
T KOG1359|consen  135 SCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK-R----------YRHVDVFDLEHCLISACKMRLKLVVTDGVF  203 (417)
T ss_pred             cccccchHHHHHhcChhhhhhccccccchhhhhhHHHh-h----------hccchhHHHHHHHHHhhhheEEEEEeccee
Confidence            99999999999999999999888888876654444332 0          113566666655432    33444433446


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ...|.+.|   +++|..++++||.++++||+++.+.++......-..+. +.+..|+.++++|+.|  |.--||..+|.
T Consensus       204 SMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~  277 (417)
T KOG1359|consen  204 SMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPK  277 (417)
T ss_pred             ccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCCh
Confidence            78898854   99999999999999999999998877643322222222 2345688999999976  33349999976

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.24  E-value=4.6e-10  Score=104.89  Aligned_cols=189  Identities=15%  Similarity=0.133  Sum_probs=134.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK  167 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  167 (319)
                      -..+..+..|+.+.       .....++++|++.|+..+.++++.+||+|+++.++|.+....+...|+..+++......
T Consensus        71 ~i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np  143 (557)
T COG1982          71 PIKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP  143 (557)
T ss_pred             cHHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence            35677777777773       24478999999999999999999999999999999999888888999998888764433


Q ss_pred             C----CcCCHHHHHhhhcc--Cc-eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          168 G----WEVDLDAVEALADE--NT-VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       168 ~----~~~d~~~l~~~l~~--~~-~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      .    .+++.+.+++.+.+  .. +++++++|+. .|++++   +++|++++++.++++.+|+++..... -.+..+- +
T Consensus       144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~-~~~~l~~-~  217 (557)
T COG1982         144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFD-FSPMLPE-S  217 (557)
T ss_pred             cccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccccc-ccccCcc-h
Confidence            2    35689999887643  23 6778888764 688876   88888999999999999999986432 1111111 1


Q ss_pred             cCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968          241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
                      -.....+++..|.+|.  ++++.-+.++....+...+++.+.+.+..+.++
T Consensus       218 ~~~~~~~~~tqS~HK~--l~alSQaS~iHv~~~~~~~~~r~nea~~~h~ST  266 (557)
T COG1982         218 ALNGGADFVTQSTHKL--LAALSQASMIHVKDGRAVNHERFNEALMMHQST  266 (557)
T ss_pred             hhhcCceEEEechhhh--hhhhhhhHHHhhCCCccCCHHHHHHHHHHHccC
Confidence            1224568999999999  455555555433321233334555555555554

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.22  E-value=1.9e-09  Score=95.61  Aligned_cols=232  Identities=17%  Similarity=0.162  Sum_probs=152.6

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .+.|+|=.-+      -...+.+.+++-..+.....      ..|+-....+++++...++.++.+|.  +..++=..+|
T Consensus        26 ~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhSG   97 (413)
T COG0112          26 REHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHSG   97 (413)
T ss_pred             hhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCCc
Confidence            3566665554      24568888888766654322      23444555678888877888777764  3445555555


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHhhCC--CeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSH--LEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p  192 (319)
                       ++|+.+++.++.+|||+|+-.+..+.++..   -....|  .+.+.+++++ +...+|.|++++...+ +|++|+....
T Consensus        98 -s~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~-et~~IDyD~~~k~a~e~kPK~ii~G~S  175 (413)
T COG0112          98 -SQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDP-ETGLIDYDEVEKLAKEVKPKLIIAGGS  175 (413)
T ss_pred             -hHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccc-ccCccCHHHHHHHHHHhCCCEEEECcc
Confidence             668888999999999999988766644321   122233  3555666654 3458999999997754 6777776554


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ..|-  .   -+++++.++|++.|.++++|.+|.. ++-+|.-+.|+.. .    -|+.+|.+|+  ++|-|-|.|++.+
T Consensus       176 aY~r--~---id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-A----dvVTtTTHKT--lrGPrGG~Il~~~  243 (413)
T COG0112         176 AYSR--P---IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-A----DVVTTTTHKT--LRGPRGGIILTND  243 (413)
T ss_pred             cccc--c---cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-c----ceEeCCcccC--CCCCCceEEEecc
Confidence            4442  2   2389999999999999999999984 5555544444332 2    2899999999  5888889998864


Q ss_pred             CCCCccchHHHHHHHHhhhhcCCcchHHHHHHHH
Q 020968          272 PNGILQDSGIVDSIKSFLNISSDPATFIQFLKSS  305 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~  305 (319)
                             +++.+++.+..-...-..+..-.+++.
T Consensus       244 -------eel~kkin~aVFPg~qggpl~HviAak  270 (413)
T COG0112         244 -------EELAKKINSAVFPGLQGGPLMHVIAAK  270 (413)
T ss_pred             -------HHHHHHhhhhcCCccCCChHHHHHHHH
Confidence                   357788777554332334444444333

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.22  E-value=4.8e-10  Score=99.05  Aligned_cols=220  Identities=19%  Similarity=0.196  Sum_probs=152.6

Q ss_pred             CCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc
Q 020968           58 FPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA  131 (319)
Q Consensus        58 ~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~  131 (319)
                      |....-.|.+.+|+.+.+++...      +--+...-..+|++.+|++.+        .+..++.++..-|....+..|.
T Consensus       181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~aALlFsSCfVANDstLftLa  252 (570)
T KOG1360|consen  181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KEAALLFSSCFVANDSTLFTLA  252 (570)
T ss_pred             cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------CcceeeeeeeeeccchHHHHHH
Confidence            34456779999999988876321      111223345789999999984        3444444454445444444442


Q ss_pred             --CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCCCccccccCHHHH
Q 020968          132 --RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       132 --~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l  205 (319)
                        -||..|....-.|.+.....+..+..-..+.-       -|++.|++++..    -+++|.+...+..+|.+-   ++
T Consensus       253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc---pl  322 (570)
T KOG1360|consen  253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC---PL  322 (570)
T ss_pred             HHCCCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC---CH
Confidence              28999988889998888888888887666653       288888888753    468888999999999994   49


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS  284 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  284 (319)
                      ++|++++++||.+-++||++.-..|+.+.-..-..- ....-.|+.+++.|+||.-|   |||.+..        .+++-
T Consensus       323 eelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~LvDm  391 (570)
T KOG1360|consen  323 EELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLVDM  391 (570)
T ss_pred             HHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHHHH
Confidence            999999999999999999998666653321110000 01112388999999999988   9998743        48888


Q ss_pred             HHHhhh-h---cCCcchHHHHHHHHH
Q 020968          285 IKSFLN-I---SSDPATFIQFLKSSR  306 (319)
Q Consensus       285 ~~~~~~-~---~~~~~~~~q~~~~~~  306 (319)
                      ++.+.. .   ++.++.++.-|++.+
T Consensus       392 iRSyAaGFIFTTSLPP~vl~GAleaV  417 (570)
T KOG1360|consen  392 IRSYAAGFIFTTSLPPMVLAGALEAV  417 (570)
T ss_pred             HHHhcCceEEecCCChHHHHhHHHHH
Confidence            888764 1   445566666665554

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.22  E-value=8.8e-10  Score=100.82  Aligned_cols=185  Identities=11%  Similarity=0.028  Sum_probs=122.4

Q ss_pred             CCCcHHHHHHHHHHhhcC--------CCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEe-CCHHHHHHHHHHH
Q 020968           61 FRTASVAVDAIVHSVRSA--------RFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLT-LGCTQAIEVILTV  129 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~--------~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~-~G~t~ai~~~~~~  129 (319)
                      -..++.+++++.+.+...        ...++.+.  .-+.+.++.+++++    +.. +..+++++ ++++.++..++..
T Consensus        12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgt~~~Ea~~~n   86 (360)
T PRK05355         12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NIP-DNYKVLFLQGGASLQFAMVPMN   86 (360)
T ss_pred             CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEEcCCchHHHHHHHHh
Confidence            367899999998876321        11122221  12344555555555    321 23356555 6689999999999


Q ss_pred             hcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHh-hhccCceEEEEcCCCCccccccCHHHHH
Q 020968          130 LARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQ  206 (319)
Q Consensus       130 l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~v~l~~p~nptG~~~~~~~l~  206 (319)
                      ++.+|+++++......+  +...++..|.. ..+...+..+ ..+..++++ .++++++.|.+++..+.||+..+  ++.
T Consensus        87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~  162 (360)
T PRK05355         87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP  162 (360)
T ss_pred             cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence            99999988877655543  46788888865 5555433233 234444444 67778899999999999999974  355


Q ss_pred             HHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       207 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ++      +|+++++|.+.+.    +..+..+..+   +  +++.|..|.++.||  +|.+.+++
T Consensus       163 ~i------~g~l~vVDavss~----g~~~idv~~~---d--~~~~ssqK~lgP~G--lg~l~~s~  210 (360)
T PRK05355        163 DT------GDVPLVADMSSDI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTIVIVRE  210 (360)
T ss_pred             cc------CCCcEEEEcCccc----cCccCCHHHc---c--EEEEeccccccCCc--eEEEEECH
Confidence            55      7999999999987    3334444433   2  88999999998666  67776644

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.21  E-value=5.7e-09  Score=98.00  Aligned_cols=247  Identities=17%  Similarity=0.130  Sum_probs=139.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++|+..|.-...-. --.|.+.+++.+++.....  +.......+....+|+.+.+..+.. ..+.+++++++++|+
T Consensus        53 G~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~  128 (441)
T PRK05769         53 GNVYLDFNAGIAVTNVG-HAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTESN  128 (441)
T ss_pred             CCEEEECCCchhhcccC-CCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence            56677887774221111 3357899999998875322  1111112344555666665432210 136899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCCC--Cc-C--------CHHHH
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKG--WE-V--------DLDAV  176 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~--------d~~~l  176 (319)
                      ..+++...  ....+|+....+|++....+... +.             .+..++......  |. -        +.+.+
T Consensus       129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  208 (441)
T PRK05769        129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFI  208 (441)
T ss_pred             HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHH
Confidence            99987543  12367888888887754332221 11             122222210000  00 0        12335


Q ss_pred             Hh-hhc-----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968          177 EA-LAD-----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT  249 (319)
Q Consensus       177 ~~-~l~-----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~  249 (319)
                      ++ .++     ++..+|++.......|.+ .+.+.++++.++|+++|+++|+||++.++...|..+ ....+.-.+.++ 
T Consensus       209 e~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDiv-  286 (441)
T PRK05769        209 EDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDII-  286 (441)
T ss_pred             HHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCEE-
Confidence            55 222     234555555445556764 467779999999999999999999999875555322 222222222233 


Q ss_pred             EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                        +++|.++ .|+++|++++++        ++...+......+.+.+++++.++..++
T Consensus       287 --t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L  333 (441)
T PRK05769        287 --TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATL  333 (441)
T ss_pred             --EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHH
Confidence              4799976 689999999854        2433222122223344677766655543

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.21  E-value=1.3e-09  Score=109.94  Aligned_cols=205  Identities=20%  Similarity=0.218  Sum_probs=132.2

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC-CHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GCT  120 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~-G~t  120 (319)
                      ...|.|+.  ..    ...++.+...+...-.-..++.|.|   ..|..++...+.+++.+..|    .+++-+.. |++
T Consensus       499 ~~~i~lGs--ct----~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG----~d~~sl~~~~ga  568 (954)
T PRK05367        499 RSMIPLGS--CT----MKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITG----YDAVSLQPNAGA  568 (954)
T ss_pred             cceeeCCc--CC----CcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHC----CCCEEECccHHH
Confidence            35677777  33    2445666554443211111233433   13455666666677766555    33566655 455


Q ss_pred             HHHHHHHHHhc----CCCC----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEE
Q 020968          121 QAIEVILTVLA----RPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVI  189 (319)
Q Consensus       121 ~ai~~~~~~l~----~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l  189 (319)
                      +|....+.++.    ++|+    +|+++...|......+...|++++.++.+.  +..+|+++|++.+++   +..+|++
T Consensus       569 ~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~i  646 (954)
T PRK05367        569 QGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDE--NGNIDLDDLRAKAEEHADNLAAIMI  646 (954)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCC--CCCcCHHHHHHHHhccCCCeEEEEE
Confidence            55544333332    4555    699999999888888999999999999864  347999999998865   4667788


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceee
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLG  265 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G  265 (319)
                      ++|++-.+..   .++++|+++|+++|+++++|.++......   ......+.   -.++..|.+|+|+.|    |-.+|
T Consensus       647 t~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~---l~~pg~~G---ADi~~~s~HK~f~~P~G~GGPg~G  717 (954)
T PRK05367        647 TYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVG---LARPGDIG---ADVSHLNLHKTFCIPHGGGGPGVG  717 (954)
T ss_pred             EcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccC---CCChhhcC---CCEEEecCcccCCCCcCCCCCceE
Confidence            8888764444   34999999999999999999999642211   11111222   238889999998643    44578


Q ss_pred             EEEee
Q 020968          266 WLVTS  270 (319)
Q Consensus       266 ~i~~~  270 (319)
                      .+.+.
T Consensus       718 ~l~vr  722 (954)
T PRK05367        718 PIGVK  722 (954)
T ss_pred             EEeec
Confidence            87764

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.17  E-value=5e-09  Score=99.64  Aligned_cols=255  Identities=18%  Similarity=0.118  Sum_probs=143.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC-cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..++||..|--..+.. --.|.+.+++++++.....  +... .+..+....+++.+.+... ..+.+.++++++|++
T Consensus        87 dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE  162 (504)
T PLN02760         87 NGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE  162 (504)
T ss_pred             CCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence            467789988863221122 4468899999998876322  1111 1233455556666544221 113357999999999


Q ss_pred             HHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHH-hhCCCe------------EEEEeccCCCCCc----------
Q 020968          122 AIEVILTVLA------R-PG-ANILLPRPGFPYYEARA-THSHLE------------VRHFDLLPAKGWE----------  170 (319)
Q Consensus       122 ai~~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~-~~~g~~------------~~~~~~~~~~~~~----------  170 (319)
                      |+..+++...      . ++ .+|+...-.|++....+ ...|..            +..++..  ..+.          
T Consensus       163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~  240 (504)
T PLN02760        163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEEE  240 (504)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHHH
Confidence            9999998763      1 22 57888888887643222 222221            1111110  0000          


Q ss_pred             ---CCHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          171 ---VDLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       171 ---~d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                         ...+.+++.+.    ++..+|++.......|.+ .+..-++++.++|+++|+++|.||++.+|...|.... ...++
T Consensus       241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~g  319 (504)
T PLN02760        241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYN  319 (504)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcC
Confidence               01234666553    234455555445555764 4667799999999999999999999987755453221 22222


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hcccc
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNS  312 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~  312 (319)
                      -.+.   +.+++|.++...+.+|.+++.+        ++.+.+...        ...+.+.++++..+..+.+  +++++
T Consensus       320 v~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~  388 (504)
T PLN02760        320 IKPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERN  388 (504)
T ss_pred             CCCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence            1122   3468999644335899988853        466665421        2223344566665554443  34444


Q ss_pred             ccc
Q 020968          313 FLK  315 (319)
Q Consensus       313 ~~~  315 (319)
                      +.+
T Consensus       389 l~~  391 (504)
T PLN02760        389 IPE  391 (504)
T ss_pred             HHH
Confidence            443

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.17  E-value=5.7e-09  Score=97.68  Aligned_cols=240  Identities=13%  Similarity=0.104  Sum_probs=137.4

Q ss_pred             CCCeEeccCC--CCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g--~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +..++||..|  ....   =-..|.+.+++.+++..... ..|.    ..+.+..+|+.+.+..+  -..+.++++++++
T Consensus        74 G~~ylD~~~g~~~~~l---Gh~hp~v~~Av~~ql~~l~~~~~~~----~~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs  144 (442)
T TIGR03372        74 GNEFIDCLGGFGIFNV---GHRNPNVIAAVENQLAKQPLHSQEL----LDPLRALLAKTLAALTP--GKLKYSFFCNSGT  144 (442)
T ss_pred             CCEEEECCccHHhhhc---CCCCHHHHHHHHHHHHhCCCccccc----CCHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence            5667787766  2221   13468899999998875322 1122    23445556666554322  1236799999999


Q ss_pred             HHHHHHHHHhcC----CC-CEEEEcCCCCcchHHHHhhC-CCeEE---EEeccCCCC--CcCCHHHHHhhhc------cC
Q 020968          121 QAIEVILTVLAR----PG-ANILLPRPGFPYYEARATHS-HLEVR---HFDLLPAKG--WEVDLDAVEALAD------EN  183 (319)
Q Consensus       121 ~ai~~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~d~~~l~~~l~------~~  183 (319)
                      +|+..+++....    .| .+|+.....|++....+... +....   ..+..+.-.  --.|.+.+++.++      ++
T Consensus       145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~  224 (442)
T TIGR03372       145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD  224 (442)
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence            999999885432    23 67888888887754333222 21100   001100000  0125667766653      23


Q ss_pred             ceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-
Q 020968          184 TVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-  261 (319)
Q Consensus       184 ~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-  261 (319)
                      ..++++.......|.+. ++.-++++.++|+++|+++|+||++.++...|.. .....+.-.+.++   +++|.+ ..| 
T Consensus       225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~l-g~G~  299 (442)
T TIGR03372       225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKAL-GGGV  299 (442)
T ss_pred             EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhh-cCCc
Confidence            45555554455567655 5677999999999999999999999876544432 1222222112233   489996 457 


Q ss_pred             ceeeEEEeeCCCCCccchHHHHHHHHh---hhhcCCcchHHHHHHHH
Q 020968          262 WRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQFLKSS  305 (319)
Q Consensus       262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~  305 (319)
                      +.+|.+++.+        ++.+.+...   ...+.+.++++..+...
T Consensus       300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a  338 (442)
T TIGR03372       300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALA  338 (442)
T ss_pred             ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHH
Confidence            6899998753        455555321   12233345555555444

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK07482 hypothetical protein; Provisional

Probab=99.15  E-value=5.7e-09  Score=98.47  Aligned_cols=255  Identities=16%  Similarity=0.121  Sum_probs=147.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..+|||..|--..... .-.|.+.++++++++...+ ..+.  ....+.+..+|+.+.+...  -+.+.+++++++++
T Consensus        48 dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSE  122 (461)
T PRK07482         48 QGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSD  122 (461)
T ss_pred             CCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence            467788988884322122 3468899999999876431 1111  1223555556666655322  13468999999999


Q ss_pred             HHHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCCCC---c-------
Q 020968          122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGW---E-------  170 (319)
Q Consensus       122 ai~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~---~-------  170 (319)
                      |+..+++...      . + ..+|+....+|++....+... |.            .+..++.......   .       
T Consensus       123 Ave~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  202 (461)
T PRK07482        123 ANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFS  202 (461)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHH
Confidence            9999988653      1 2 357888888887743322211 10            1111111100000   0       


Q ss_pred             -CCHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968          171 -VDLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI  244 (319)
Q Consensus       171 -~d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~  244 (319)
                       .+++.+++.+.    ++..+|++.-.....|.+ .+..-++++.++|+++|+++|.||++.+|...|..+. ...++-.
T Consensus       203 ~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~~gv~  281 (461)
T PRK07482        203 AYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDHYGIE  281 (461)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHhcCCC
Confidence             03566777663    234555555445555765 5677899999999999999999999998865553322 2223322


Q ss_pred             CCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hccccc
Q 020968          245 VPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNSF  313 (319)
Q Consensus       245 ~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~~  313 (319)
                      +.++   .++|.+ ..|. .+|.+++.+        ++.+.+...        ...+.+.++++..+....+  ++++++
T Consensus       282 PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l  349 (461)
T PRK07482        282 PDLI---TVAKGL-TSAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENL  349 (461)
T ss_pred             CCEE---EEcccc-ccCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCH
Confidence            3344   369995 4564 899888753        455555421        1223455667766655543  344444


Q ss_pred             cc
Q 020968          314 LK  315 (319)
Q Consensus       314 ~~  315 (319)
                      .+
T Consensus       350 ~~  351 (461)
T PRK07482        350 VG  351 (461)
T ss_pred             HH
Confidence            33

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.15  E-value=9.6e-09  Score=96.92  Aligned_cols=220  Identities=15%  Similarity=0.115  Sum_probs=130.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..+||+..|--.... --..|.+.+++.++++....  +..   ..+.+..+++.+.+...   ..+.+++++++++|.
T Consensus        98 G~~yiD~~~g~g~~~l-Gh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~  168 (474)
T PLN02482         98 GNEYIDYVGSWGPAII-GHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEAC  168 (474)
T ss_pred             CCEEEEeccccccccc-CCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHH
Confidence            4445666555321111 13358899999999876542  321   12455566777665432   247999999999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCCcchHHHH-hh--CCCeEEEEecc---C---CCC-C---cCCHHHHHhhhcc---Cce
Q 020968          124 EVILTVLAR--PGANILLPRPGFPYYEARA-TH--SHLEVRHFDLL---P---AKG-W---EVDLDAVEALADE---NTV  185 (319)
Q Consensus       124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~-~~--~g~~~~~~~~~---~---~~~-~---~~d~~~l~~~l~~---~~~  185 (319)
                      ..+++....  ...+|+....+|+++.... ..  .+......+..   +   ..+ .   .-|++.+++.+..   +..
T Consensus       169 e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iA  248 (474)
T PLN02482        169 MGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIA  248 (474)
T ss_pred             HHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceE
Confidence            999886532  2368888888888754221 11  01000000000   0   000 0   0177888887753   344


Q ss_pred             EEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          186 ALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       186 ~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +|++.......|.+.+ .+-++++.++|+++|+++|+||++.++ ..+.. .....+.-...+   .+++|.++ .|+.+
T Consensus       249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PDi---~t~gK~lg-gG~Pi  322 (474)
T PLN02482        249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG-GAQEYFGITPDL---TTLGKVIG-GGLPV  322 (474)
T ss_pred             EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc-hHhHHhCCCCCE---EEecchhh-CCCce
Confidence            5555544555676554 677999999999999999999999877 33322 111112222222   37799964 78999


Q ss_pred             eEEEeeCCCCCccchHHHHHHH
Q 020968          265 GWLVTSDPNGILQDSGIVDSIK  286 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~  286 (319)
                      |.+++..        ++++.+.
T Consensus       323 gav~g~~--------ei~~~~~  336 (474)
T PLN02482        323 GAYGGRR--------EIMEMVA  336 (474)
T ss_pred             EEEEEcH--------HHHHhhc
Confidence            9997743        4666554

>PRK05965 hypothetical protein; Provisional

Probab=99.14  E-value=4.6e-09  Score=99.09  Aligned_cols=256  Identities=17%  Similarity=0.154  Sum_probs=146.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--..... .-.|.+.+++.+++....+. ........+.+..+++.+.+...  -+.+.+++++++++|
T Consensus        44 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSEA  119 (459)
T PRK05965         44 SGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMRELPYA-TGYFHFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSDA  119 (459)
T ss_pred             CCCEEEECcccHHhccCC-CCCHHHHHHHHHHHHhcCCc-ccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhHH
Confidence            467788887763221111 23688999999988753210 00001112334445555544321  134689999999999


Q ss_pred             HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHH-hhCCC------------eEEEEeccCC--CCCcCC-------
Q 020968          123 IEVILTVLAR-------P-GANILLPRPGFPYYEARA-THSHL------------EVRHFDLLPA--KGWEVD-------  172 (319)
Q Consensus       123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~--~~~~~d-------  172 (319)
                      +..+++....       + ..+|+....+|++....+ ...+.            .+..++....  ..+.-|       
T Consensus       120 ve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (459)
T PRK05965        120 VDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAA  199 (459)
T ss_pred             HHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHH
Confidence            9999886431       2 357888888887753222 11111            0112221100  001113       


Q ss_pred             -HHHHHhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          173 -LDAVEALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       173 -~~~l~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                       ++.+++.+.    ++..+|++.-.....|. +.+..-++++.++|++||+++|.||++.+|...|..+ ....+.-.+.
T Consensus       200 ~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~PD  278 (459)
T PRK05965        200 SVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVPD  278 (459)
T ss_pred             HHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCCC
Confidence             246666664    24455665554555676 5577779999999999999999999999986555322 2222322233


Q ss_pred             eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH--------hhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS--------FLNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      ++   .++|.+ ..| +.+|.+++.+        ++.+.+..        ....+.+.++++..+..+.+  ++++++.+
T Consensus       279 iv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~  346 (459)
T PRK05965        279 LM---TVAKGL-TSGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLA  346 (459)
T ss_pred             eE---Eechhh-ccCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence            44   469995 557 5999999853        46655542        12223455666665544443  44555443

>PRK07678 aminotransferase; Validated

Probab=99.14  E-value=8.2e-09  Score=97.21  Aligned_cols=254  Identities=12%  Similarity=0.081  Sum_probs=142.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--..... .-.|.+.+++.+++.....  +... ...+....+++.+.+..+   ..+.+++++++++|
T Consensus        45 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~--~~~~-~~~~~~~~lae~l~~~~~---~~~~v~f~~sGseA  117 (451)
T PRK07678         45 QGNRYLDGMSGLWCVNVG-YGRKELAEAAYEQLKTLSY--FPLT-QSHEPAIKLAEKLNEWLG---GEYVIFFSNSGSEA  117 (451)
T ss_pred             CCCEEEEccccHHhhcCC-CCCHHHHHHHHHHHHhcCc--cccc-cCCHHHHHHHHHHHHhCC---CCCEEEEeCCcHHH
Confidence            467788887763221111 3358888999988875432  1111 112334445665554332   23589999999999


Q ss_pred             HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCC--CcC-----C--
Q 020968          123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKG--WEV-----D--  172 (319)
Q Consensus       123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~~-----d--  172 (319)
                      +..+++....       +| .+|+....+|++....+.. .+.            .+..++......  +..     +  
T Consensus       118 ~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (451)
T PRK07678        118 NETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLE  197 (451)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHH
Confidence            9998876431       23 5788888888775433321 111            112222110000  000     1  


Q ss_pred             -HHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          173 -LDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       173 -~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                       .+.+++.+.    ++..+|++.-.....|.+ .+.+-++++.++|+++|+++|.||++.+|...|..+ ....++-.+.
T Consensus       198 ~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv~PD  276 (451)
T PRK07678        198 CVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGVKPD  276 (451)
T ss_pred             HHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHhcCCCCC
Confidence             123455553    344556555444445655 566779999999999999999999998875554321 1222322222


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh-------hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      ++   +++|.++...+.+|.+++.+        ++.+.+...       ...+.+.++++..+....+  ++++++.+
T Consensus       277 iv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~  343 (451)
T PRK07678        277 II---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIE  343 (451)
T ss_pred             EE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence            33   57999654447999999854        466666421       2223344555555544433  34444443

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.14  E-value=1.8e-09  Score=98.65  Aligned_cols=200  Identities=20%  Similarity=0.154  Sum_probs=135.1

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI  126 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~  126 (319)
                      .|||=+...+    --+.+..+++|..   .+.  .|+.++...+|++.+++++        ..+.++.|..++.+-..+
T Consensus        43 ~IDLrSDTgT----~apS~~m~aAM~~---GDD--~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE~Il  105 (467)
T TIGR02617        43 FIDLLTDSGT----GAVTQSMQAAMMR---GDE--AYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIY  105 (467)
T ss_pred             EEECccCCCC----CCCCHHHHHHHHc---CCc--ccccCchHHHHHHHHHHHh--------CCceEEECCCCchHHHHH
Confidence            4666555533    1366788888875   332  5888888999999999998        456788898889999999


Q ss_pred             HHHhcC-CCCEEEEcCC--------CCcchHHHHhhCCCeEEEEecc--------CCCCCcCCHHHHHhhhcc----Cce
Q 020968          127 LTVLAR-PGANILLPRP--------GFPYYEARATHSHLEVRHFDLL--------PAKGWEVDLDAVEALADE----NTV  185 (319)
Q Consensus       127 ~~~l~~-~gd~Vl~~~p--------~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~  185 (319)
                      ++.+++ +|+.+.+..+        .|......+...|..+..+...        ...+..+|++++++++++    +..
T Consensus       106 ~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~  185 (467)
T TIGR02617       106 IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVP  185 (467)
T ss_pred             HHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCce
Confidence            999988 6777665443        2233345677888887765432        122357899999999874    222


Q ss_pred             EEEEcCCCC-ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc-c---------CCCCCCCCCccc-----CCCCCeEE
Q 020968          186 ALVIINPGN-PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL-A---------FGNTPFVPMGVF-----GSIVPVLT  249 (319)
Q Consensus       186 ~v~l~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~-~---------~~~~~~~~~~~~-----~~~~~vi~  249 (319)
                      .+...-.+| -.|.++|.+.++++.++|+++|+.++.|.+-..- .         +.+.   ++..+     ...  ..+
T Consensus       186 ~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~---si~eI~rE~~~~a--Dsv  260 (467)
T TIGR02617       186 YIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNW---SIEQITRETYKYA--DML  260 (467)
T ss_pred             eeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCC---CHHHHHHHhhccC--CEE
Confidence            332222234 4589999999999999999999999999865331 1         2222   22211     111  267


Q ss_pred             EecCccccCCC-cceeeEEEeeC
Q 020968          250 LGSISKRWIVP-GWRLGWLVTSD  271 (319)
Q Consensus       250 ~~s~sK~~~~~-G~r~G~i~~~~  271 (319)
                      ..|+||.+++| |   |++++++
T Consensus       261 t~slsKglgApvG---g~Lag~d  280 (467)
T TIGR02617       261 AMSAKKDAMVPMG---GLLCFKD  280 (467)
T ss_pred             EEEcCCCCCCccc---ceEEecc
Confidence            77999998777 4   5555544

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK12403 putative aminotransferase; Provisional

Probab=99.14  E-value=7.9e-09  Score=97.51  Aligned_cols=255  Identities=17%  Similarity=0.154  Sum_probs=137.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC-cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..++||..|--.....+ -.|.+.++++++++....  +... .+..+....+++.+....+  -..+.+++++++++
T Consensus        52 dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse  126 (460)
T PRK12403         52 DGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSE  126 (460)
T ss_pred             CCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence            3667888776632111122 458899999999876321  1111 1223344445555444222  12468999999999


Q ss_pred             HHHHHHHHhc-------CCCC-EEEEcCCCCcchH-HHHhhCCCe-----------EEEEeccCC--CCCcC--------
Q 020968          122 AIEVILTVLA-------RPGA-NILLPRPGFPYYE-ARATHSHLE-----------VRHFDLLPA--KGWEV--------  171 (319)
Q Consensus       122 ai~~~~~~l~-------~~gd-~Vl~~~p~~~~~~-~~~~~~g~~-----------~~~~~~~~~--~~~~~--------  171 (319)
                      |+..+++...       ++++ .|+....+|++.. ......|..           +..++....  ..+..        
T Consensus       127 A~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  206 (460)
T PRK12403        127 ANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR  206 (460)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence            9999998764       1223 4555556776542 222222211           112221000  00011        


Q ss_pred             CHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          172 DLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       172 d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                      +.+.+++.+.    ++..+|++.......|.+ .+.+-++++.++|++||+++|.||++..|...|.... ...++-.+.
T Consensus       207 ~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv~PD  285 (460)
T PRK12403        207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGFEPD  285 (460)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcCCCCC
Confidence            1244555442    234455555445555764 4667799999999999999999999988765554321 112222222


Q ss_pred             eEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          247 VLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                       |+  +++|.+ ..|. .+|.+++.+        ++.+.+...     ...+.+.++++..++...+  ++++++.+
T Consensus       286 -iv--~~gK~l-ggG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~  350 (460)
T PRK12403        286 -TL--SIAKGL-TSGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVT  350 (460)
T ss_pred             -eE--EEcccc-cccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence             33  389995 4574 899888743        455555321     1223334555555544433  34444443

>PRK06105 aminotransferase; Provisional

Probab=99.13  E-value=8.1e-09  Score=97.45  Aligned_cols=257  Identities=16%  Similarity=0.141  Sum_probs=144.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..++||..|.-..... --+|.+.+++.++++...+ ....  ....+.+..+++.+.+..+  -+.+.+++++++++
T Consensus        46 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse  120 (460)
T PRK06105         46 AGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSE  120 (460)
T ss_pred             CCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence            467789988774221111 3368899999999876321 1111  1123444445555554332  13468999999999


Q ss_pred             HHHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhh-CCCe------------EEEEeccCCCCCc----------
Q 020968          122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATH-SHLE------------VRHFDLLPAKGWE----------  170 (319)
Q Consensus       122 ai~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~----------  170 (319)
                      |+..+++...      . + ..+|+...-.|++....+.. .+..            +..++......+.          
T Consensus       121 Ave~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  200 (460)
T PRK06105        121 ANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFA  200 (460)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHH
Confidence            9999998742      1 2 35788888888764322211 1111            1111111000000          


Q ss_pred             -CCHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968          171 -VDLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI  244 (319)
Q Consensus       171 -~d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~  244 (319)
                       ...+++++.+.    ++..+|++.......|.+ .+++-++++.++|+++|+++|+||++.++...|..+ ....++-.
T Consensus       201 ~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~~~v~  279 (460)
T PRK06105        201 TRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETFGIK  279 (460)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHhcCCC
Confidence             01345666652    234555555445555764 577779999999999999999999998775444322 12222222


Q ss_pred             CCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hcccccc
Q 020968          245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNSFL  314 (319)
Q Consensus       245 ~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~~~  314 (319)
                      +.++   +++|.++...+.+|.+++.+        ++.+.+...        ...+...++++..++...+  ++++++.
T Consensus       280 PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~  348 (460)
T PRK06105        280 PDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLV  348 (460)
T ss_pred             CCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence            2233   67999654336899999853        466655431        1223345666665544433  4444554


Q ss_pred             cc
Q 020968          315 KS  316 (319)
Q Consensus       315 ~~  316 (319)
                      ++
T Consensus       349 ~~  350 (460)
T PRK06105        349 GN  350 (460)
T ss_pred             HH
Confidence            43

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.13  E-value=5.5e-09  Score=98.37  Aligned_cols=216  Identities=16%  Similarity=0.125  Sum_probs=125.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++|+..|--...- =--.|.+.+++.+++.....  +. .....+.+..+++.+.....  -..+.+++++++++|+
T Consensus        81 G~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~ql~~l~~--~~-~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAv  154 (459)
T PRK11522         81 GQEFIDCLGGFGIFNV-GHRNPVVVSAVQNQLAKQPL--HS-QELLDPLRAMLAKTLAALTP--GKLKYSFFCNSGTESV  154 (459)
T ss_pred             CCEEEECCcCHHhhhc-CCCCHHHHHHHHHHHhhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCchHHH
Confidence            4556777666211101 13458899999998875322  11 11223455556666554322  1236899999999999


Q ss_pred             HHHHHHhcC----CC-CEEEEcCCCCcchHHHHh-hCCCeEEE---EeccCCCC--CcCCHHHHHhhhc------cCceE
Q 020968          124 EVILTVLAR----PG-ANILLPRPGFPYYEARAT-HSHLEVRH---FDLLPAKG--WEVDLDAVEALAD------ENTVA  186 (319)
Q Consensus       124 ~~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~-~~g~~~~~---~~~~~~~~--~~~d~~~l~~~l~------~~~~~  186 (319)
                      ..+++....    +| .+|+.....|++....+. ..+.....   .+..+.-.  --.|.+.+++.+.      ++..+
T Consensus       155 e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAa  234 (459)
T PRK11522        155 EAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAA  234 (459)
T ss_pred             HHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEE
Confidence            999885431    23 468888888877543332 22211110   11100000  0126777777764      23445


Q ss_pred             EEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-cee
Q 020968          187 LVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRL  264 (319)
Q Consensus       187 v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~  264 (319)
                      +++.......|.+ .+..-++++.++|+++|+++|.||++.++...|..+ ....++-.+.++   +++|.+ ..| +.+
T Consensus       235 vIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~l-ggG~~Pi  309 (459)
T PRK11522        235 VILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKAL-GGGVMPI  309 (459)
T ss_pred             EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhh-hCCCccc
Confidence            5555555566765 466679999999999999999999998764444321 112222222233   789996 456 689


Q ss_pred             eEEEee
Q 020968          265 GWLVTS  270 (319)
Q Consensus       265 G~i~~~  270 (319)
                      |.+++.
T Consensus       310 gav~~~  315 (459)
T PRK11522        310 GATIAT  315 (459)
T ss_pred             eeEEEc
Confidence            999885

>PRK07046 aminotransferase; Validated

Probab=99.11  E-value=2e-08  Score=94.47  Aligned_cols=216  Identities=13%  Similarity=0.044  Sum_probs=126.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..+|||..|.-...- ---.|.+.+++.+++.......+.     .+....+++.+.+..    ..+.+.+++++++|.
T Consensus        74 G~~yiD~~~g~g~~~l-Gh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA~  143 (453)
T PRK07046         74 GHRYDDFCLGDTGAMF-GHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTATDAN  143 (453)
T ss_pred             CCEEEEeccccccccc-CCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHHHHH
Confidence            4556776655311101 134589999999998875432222     244455666555432    357899999999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCCcchHHHHh-h--CCCe-----EEEEeccCCCCC----cCCHHHHHhhhcc-CceEEE
Q 020968          124 EVILTVLAR--PGANILLPRPGFPYYEARAT-H--SHLE-----VRHFDLLPAKGW----EVDLDAVEALADE-NTVALV  188 (319)
Q Consensus       124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~--~g~~-----~~~~~~~~~~~~----~~d~~~l~~~l~~-~~~~v~  188 (319)
                      ..+++....  ..++|+...-+|+++..... .  .+..     ...++.......    --|++.+++.+.. +..+|+
T Consensus       144 e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi  223 (453)
T PRK07046        144 RFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVAAVL  223 (453)
T ss_pred             HHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCCCCeEEEE
Confidence            999886532  34788888888887632211 1  1100     000000000000    0278889888853 344555


Q ss_pred             EcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc--CCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968          189 IINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLA--FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       189 l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      +.-.....|. ..+.+-++++.++|+++|+++|.||+.. |.  +++.    ...++-.+. ++  +++|.+ ..|+.+|
T Consensus       224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~----~~~~gv~PD-i~--t~gK~l-ggG~Pi~  294 (453)
T PRK07046        224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGY----TRAHGLEPD-FL--VVGKPI-AGGVPCA  294 (453)
T ss_pred             ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcch----hHHhCCCcc-ce--eehhhh-cCCCcce
Confidence            4433434454 4455679999999999999999999986 32  2221    111221122 33  489996 5689999


Q ss_pred             EEEeeCCCCCccchHHHHHHH
Q 020968          266 WLVTSDPNGILQDSGIVDSIK  286 (319)
Q Consensus       266 ~i~~~~~~~~~~~~~~~~~~~  286 (319)
                      .+++..        ++.+.+.
T Consensus       295 av~g~~--------~i~~~~~  307 (453)
T PRK07046        295 VYGFSA--------ELAERAQ  307 (453)
T ss_pred             eeeehH--------HHHHHHh
Confidence            988753        4666664

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.09  E-value=8.2e-09  Score=96.57  Aligned_cols=255  Identities=17%  Similarity=0.164  Sum_probs=140.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..... .-.|.+.+++.+++.+..........  .+....+++.+.+..+  -..+.+++++++++|
T Consensus        43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~--~~~~~v~f~~sGseA  117 (427)
T TIGR00508        43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFT--HKPAIELCQKLVKMTP--NALDCVFLADSGSVA  117 (427)
T ss_pred             CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccC--CHHHHHHHHHHHhhCC--CCCCEEEEeCCcHHH
Confidence            467789988774221112 34578889999888753211110001  1222334444433222  134689999999999


Q ss_pred             HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhh-CCCe-------------EEEEeccCCCCCc-----CCHHH
Q 020968          123 IEVILTVLAR-------P-GANILLPRPGFPYYEARATH-SHLE-------------VRHFDLLPAKGWE-----VDLDA  175 (319)
Q Consensus       123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~~-----~d~~~  175 (319)
                      +..+++....       + ..+|+....+|++....+.. .+..             ...++. +...+.     -|.++
T Consensus       118 ~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~  196 (427)
T TIGR00508       118 VEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAITP  196 (427)
T ss_pred             HHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHHHH
Confidence            9988875431       2 26788888888775332222 1211             011111 111111     14566


Q ss_pred             HHhhhc---cCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          176 VEALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       176 l~~~l~---~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      +++.+.   ++..+|++... ..-.|. .++.+.++++.++|+++|+++|+||++.++...|..+.. ..++-... |+ 
T Consensus       197 l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pD-i~-  273 (427)
T TIGR00508       197 LAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPD-IL-  273 (427)
T ss_pred             HHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCC-EE-
Confidence            666664   23445554442 444454 557899999999999999999999999776555533221 11221222 33 


Q ss_pred             ecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          251 GSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       251 ~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                       +++|.+ ..|+ .++.+++.+        ++.+.++..      ...+...++++..++..++  +.++++.++
T Consensus       274 -~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~  338 (427)
T TIGR00508       274 -CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQ  338 (427)
T ss_pred             -Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence             379997 5674 677777642        466666531      1112233555555544433  345555544

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.09  E-value=7.9e-09  Score=96.59  Aligned_cols=222  Identities=14%  Similarity=0.061  Sum_probs=128.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+||+..|--...- ---.|.+.+++.+++.......+.     .+.+..+++.+.+..+  ...+.+++++++++|
T Consensus        51 dG~~yiD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA  122 (433)
T PRK00615         51 LGKTFIDFCGSWGSLIH-GHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSSGTEA  122 (433)
T ss_pred             CCCEEEEcccchhcccc-CCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchHHH
Confidence            46678888776422111 134688999999988764321111     2334445555544322  223689999999999


Q ss_pred             HHHHHHHhcC-CC-CEEEEcCCCCcchHHH---HhhC-CCeE----EEEeccC-CCC---C-cCCHHHHHhhhcc---Cc
Q 020968          123 IEVILTVLAR-PG-ANILLPRPGFPYYEAR---ATHS-HLEV----RHFDLLP-AKG---W-EVDLDAVEALADE---NT  184 (319)
Q Consensus       123 i~~~~~~l~~-~g-d~Vl~~~p~~~~~~~~---~~~~-g~~~----~~~~~~~-~~~---~-~~d~~~l~~~l~~---~~  184 (319)
                      +..+++.... .| .+|+....+|+++...   .... +...    ......+ ...   + .-|++.+++.+..   +.
T Consensus       123 ~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~  202 (433)
T PRK00615        123 TMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRV  202 (433)
T ss_pred             HHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCce
Confidence            9999886532 23 6788888888774311   1111 1000    0000000 000   0 1267888887742   34


Q ss_pred             eEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968          185 VALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      .+|++.......|.+. +.+-++++.++|++||+++|+||++.++ ..|.. .....+.-.+. |+  +++|.++ .|+.
T Consensus       203 aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~-ga~~~~gv~PD-i~--~~gK~lg-gG~p  276 (433)
T PRK00615        203 AGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG-GAAAIYHVKPD-IT--VYGKILG-GGLP  276 (433)
T ss_pred             EEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh-HHHHhcCCCCC-eE--EEccccc-CCcc
Confidence            4555554455557654 5667999999999999999999999776 33321 11111221122 33  4899964 5688


Q ss_pred             eeEEEeeCCCCCccchHHHHHHH
Q 020968          264 LGWLVTSDPNGILQDSGIVDSIK  286 (319)
Q Consensus       264 ~G~i~~~~~~~~~~~~~~~~~~~  286 (319)
                      +|++++++        ++++.+.
T Consensus       277 ~~av~~~~--------~i~~~~~  291 (433)
T PRK00615        277 AAAVVAHK--------SIMDHLA  291 (433)
T ss_pred             eeeeeecH--------HHHhhhc
Confidence            99999854        4666654

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.09  E-value=2.4e-08  Score=90.64  Aligned_cols=207  Identities=17%  Similarity=0.154  Sum_probs=136.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+||+..+.-...-. -.+|.+.+|+++++..+.  .|+.+   .+++-.+|+.+.+..+   ..+.|-+++++|+|
T Consensus        51 DGn~YIDy~~~~Gp~ilG-H~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEA  121 (432)
T COG0001          51 DGNEYIDYVLGWGPLILG-HAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEA  121 (432)
T ss_pred             CCCEeeehhccCcccccC-CCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHH
Confidence            467789988886432222 345779999999998864  46543   2555557777766433   34899999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHH-HhhCCCeE-------------------EEEeccCCCCCcCCHHHHHhhh
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEAR-ATHSHLEV-------------------RHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~-~~~~g~~~-------------------~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                      ...+++.-.  ...|+|+..+-+|+.+... +...|-..                   +.++.       -|++.+++++
T Consensus       122 tmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~~~~  194 (432)
T COG0001         122 TMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALEEAF  194 (432)
T ss_pred             HHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHHHHH
Confidence            998887653  2348999999999876543 33333211                   11221       1889999988


Q ss_pred             ccC--ceEEEEcCC-CCccccccCHH-HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          181 DEN--TVALVIINP-GNPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       181 ~~~--~~~v~l~~p-~nptG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                      +..  ..+.+|.-| ---.|.+.+.+ -++++.++|+++|+++|.||+.-.|...-..-.....+.++     +.++.|.
T Consensus       195 ~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi  269 (432)
T COG0001         195 EEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI  269 (432)
T ss_pred             HHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh
Confidence            653  233444544 33346655544 48999999999999999999998775431111112222222     3478999


Q ss_pred             cCCCcceeeEEEeeC
Q 020968          257 WIVPGWRLGWLVTSD  271 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~  271 (319)
                       ...|+.+|.+.++.
T Consensus       270 -IGGGlP~ga~gGr~  283 (432)
T COG0001         270 -IGGGLPIGAFGGRA  283 (432)
T ss_pred             -hcCCcceeeeccHH
Confidence             68999999998853

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.09  E-value=2e-08  Score=94.05  Aligned_cols=251  Identities=14%  Similarity=0.073  Sum_probs=144.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--...- =--.|.+.+++.+++.......+.     .+.+..+++.+.+..+   ..+.+++++++++|
T Consensus        51 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGseA  121 (428)
T PRK12389         51 DGNKYIDYLAAYGPIIT-GHAHPHITKAITEAAENGVLYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGTEA  121 (428)
T ss_pred             CCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHHH
Confidence            36678888766422111 134588999999988764332221     2334555555544322   24689999999999


Q ss_pred             HHHHHHHhcC--CCCEEEEcCCCCcchHHHHh-hCCCeEEEE------ecc--CCCCC----cCCHHHHHhhhc---cCc
Q 020968          123 IEVILTVLAR--PGANILLPRPGFPYYEARAT-HSHLEVRHF------DLL--PAKGW----EVDLDAVEALAD---ENT  184 (319)
Q Consensus       123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~------~~~--~~~~~----~~d~~~l~~~l~---~~~  184 (319)
                      +..+++....  ...+|+...-+|++....+. ..+......      ...  ...+.    ..|++.+++.+.   ++.
T Consensus       122 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  201 (428)
T PRK12389        122 VMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEV  201 (428)
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcE
Confidence            9999886532  23678888888877543222 222111000      000  00000    126888888774   244


Q ss_pred             eEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968          185 VALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      .+|++.......|.+. +..-++++.++|+++|+++|.||++.++ ..+... ....++-.+.+   -+++|.+ ..|+.
T Consensus       202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~-a~~~~gv~PDi---vt~gK~l-ggG~P  275 (428)
T PRK12389        202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGG-AQDLLGVEPDL---TALGKII-GGGLP  275 (428)
T ss_pred             EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcch-hhHHhCCCCCe---eeechhh-cCCCc
Confidence            5555554456667654 5677999999999999999999999987 322110 11111211223   3789996 56799


Q ss_pred             eeEEEeeCCCCCccchHHHHHHHH----hhhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          264 LGWLVTSDPNGILQDSGIVDSIKS----FLNISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       264 ~G~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      +|.+++..        ++.+.+..    ....+...++++..+....+  ++++++.++
T Consensus       276 i~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~  326 (428)
T PRK12389        276 IGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEK  326 (428)
T ss_pred             eeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHH
Confidence            99998743        46665532    11223345666655444433  344444443

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.08  E-value=1.7e-08  Score=95.11  Aligned_cols=217  Identities=13%  Similarity=0.079  Sum_probs=125.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..+..... . --.|.+.+++.+++....+   .......+.+..+++.+.+..+  -..+.+++++++++|+
T Consensus        71 G~~ylD~~g~~~~~l-G-h~~p~v~~Ai~~ql~~~~~---~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAv  143 (459)
T PRK06082         71 GKKYMDFHGNNVHQL-G-YGHPHVIEKVKEQMAKLPF---SPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSAI  143 (459)
T ss_pred             CCEEEEcccHhhccc-C-CCCHHHHHHHHHHHHhCCC---ccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHHH
Confidence            556778763322111 1 2668899999998875322   1111123445556666655332  1236899999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHH-HHhhCCCe------------EEEEeccCCCC--Cc-C------CHHHHHhh
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEA-RATHSHLE------------VRHFDLLPAKG--WE-V------DLDAVEAL  179 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~--~~-~------d~~~l~~~  179 (319)
                      ..+++...  ....+|+.....|++... .....|..            +..++......  +. .      +++.+++.
T Consensus       144 e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  223 (459)
T PRK06082        144 GMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYV  223 (459)
T ss_pred             HHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHH
Confidence            99987653  123678888888876432 22222211            11122110000  10 0      12456666


Q ss_pred             hc--cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968          180 AD--ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW  257 (319)
Q Consensus       180 l~--~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~  257 (319)
                      +.  .+..+|++....+..+.+.+.+-++++.++|+++|+++|.||++.++...|..+. ...++-.+.++   .++|.+
T Consensus       224 i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa-~e~~gv~PDiv---~~gKgl  299 (459)
T PRK06082        224 IEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFT-HQAYGIEPDIL---CIGKGL  299 (459)
T ss_pred             HhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhH-hHhhCCCCCEE---Eecccc
Confidence            64  2444555554454445567778899999999999999999999998755553211 11222222233   389997


Q ss_pred             CCCcceeeEEEeeC
Q 020968          258 IVPGWRLGWLVTSD  271 (319)
Q Consensus       258 ~~~G~r~G~i~~~~  271 (319)
                      +...+.+|.+++.+
T Consensus       300 ~gG~~P~~av~~~~  313 (459)
T PRK06082        300 GGGLVPIAAMITKD  313 (459)
T ss_pred             cCCCCcceEEEEcH
Confidence            54336899998853

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.08  E-value=7.6e-09  Score=88.87  Aligned_cols=185  Identities=16%  Similarity=0.121  Sum_probs=127.6

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCC---cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSST---VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL  138 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~---~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl  138 (319)
                      ..++.+.+|+.+..    . .|-.+   ....++++-+...++.     .+....++...++.|+..++..++.|||.|+
T Consensus        27 nl~~~V~~A~~~~~----l-gh~sPe~~qIm~~v~egikyVFkT-----~n~~tf~isgsGh~g~E~al~N~lePgd~vL   96 (385)
T KOG2862|consen   27 NLSGRVQEAMSRPS----L-GHMSPEFVQIMDEVLEGIKYVFKT-----ANAQTFVISGSGHSGWEAALVNLLEPGDNVL   96 (385)
T ss_pred             CCCHHHHHhhcCCc----c-ccCCHHHHHHHHHHHHHHHHHhcc-----CCCceEEEecCCcchHHHHHHhhcCCCCeEE
Confidence            55667776664432    2 23221   1223444444444422     2344566777789999999999999999999


Q ss_pred             EcCCCCc--chHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHH-HHHHHHHHHH
Q 020968          139 LPRPGFP--YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQH-LQKIAETAKK  214 (319)
Q Consensus       139 ~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~  214 (319)
                      +....-.  .+...++.+|+++..++.+.  +....++.+++.+.. +++++++++-...||+.   ++ ++...++|++
T Consensus        97 v~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~---q~~~~~~g~lc~k  171 (385)
T KOG2862|consen   97 VVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVL---QDLLAISGELCHK  171 (385)
T ss_pred             EEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceEEEEecCcccccc---chHHHHHHHHhhc
Confidence            7764443  25688899999999997654  346899999998865 67899999999999998   66 6777889999


Q ss_pred             cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEee
Q 020968          215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTS  270 (319)
Q Consensus       215 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~  270 (319)
                      |+.++++|.+.+-.   +.+ .   .+++..-.+.....-|++++| |+-+  +..+
T Consensus       172 ~~~lllVD~VaSlg---gt~-F---~mDewgVDvaytgSQKaL~aP~GLsi--isfS  219 (385)
T KOG2862|consen  172 HEALLLVDTVASLG---GTE-F---EMDEWGVDVAYTGSQKALGAPAGLSI--ISFS  219 (385)
T ss_pred             CCeEEEEechhhcC---Ccc-c---eehhhcccEEEecchhhcCCCCCcce--eecC
Confidence            99999999987752   211 1   223333347777778998885 6443  5554

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.06  E-value=4.6e-08  Score=91.88  Aligned_cols=220  Identities=17%  Similarity=0.164  Sum_probs=125.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--.... -.-.|.+.++++++++.-..  ........+.+..+++.+.+...  -..+.+++++++++|
T Consensus        44 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA  118 (442)
T PRK13360         44 DGRRVLDGTAGLWCVNA-GHGRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAP--GGLNHVFFTNSGSES  118 (442)
T ss_pred             CCCEEEECchhHHHhcc-CCCCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHH
Confidence            46678888766311100 13458899999988875221  11111112344456665544321  123689999999999


Q ss_pred             HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHh-hCC------------CeEEEEeccC--CC-CCcC-------
Q 020968          123 IEVILTVLAR-------P-GANILLPRPGFPYYEARAT-HSH------------LEVRHFDLLP--AK-GWEV-------  171 (319)
Q Consensus       123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~-~~g------------~~~~~~~~~~--~~-~~~~-------  171 (319)
                      +..+++....       + ..+|+....+|++....+. ..|            ..+..++...  .. .+..       
T Consensus       119 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  198 (442)
T PRK13360        119 VDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGA  198 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHH
Confidence            9999875431       1 2578888888877532211 111            1122222210  00 0111       


Q ss_pred             -CHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          172 -DLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       172 -d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                       ..+.+++.+.    ++..+|++.......|.+ .+..-+++|.++|+++|+++|+||++.++...|.... ...+.-..
T Consensus       199 ~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~P  277 (442)
T PRK13360        199 ELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFA-AQYFGVTP  277 (442)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh-hhhcCCCC
Confidence             1356676664    234455555445566765 5667799999999999999999999987754443321 11122112


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeC
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      . |  -+++|.++...+.+|.+++.+
T Consensus       278 D-i--vt~gK~l~gG~~P~gav~~~~  300 (442)
T PRK13360        278 D-L--LTCAKGLTNGAIPMGAVFVSS  300 (442)
T ss_pred             c-e--eeeeeccccCccceEEEEEcH
Confidence            2 2  278999754337899988753

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.06  E-value=1.4e-08  Score=94.84  Aligned_cols=217  Identities=17%  Similarity=0.116  Sum_probs=125.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ++..++||..|.-...- ---.|.+.+++.++++......+..  ...+.+..+++.+.+..+  -..+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA  112 (422)
T PRK05630         38 DGSTVIDAMSSWWSAAH-GHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGSVS  112 (422)
T ss_pred             CCCEEEEcchhHHHhcC-CCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHH
Confidence            46778888766322111 1335889999999887643211111  112334445555544322  124689999999999


Q ss_pred             HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCCCCcCC-------H
Q 020968          123 IEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKGWEVD-------L  173 (319)
Q Consensus       123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d-------~  173 (319)
                      +..+++....       + ..+|+....+|++....+... +.             ....++....  ...+       .
T Consensus       113 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~  190 (422)
T PRK05630        113 VEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYL  190 (422)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHH
Confidence            9999876431       2 257888888887743222211 11             1122222110  0111       2


Q ss_pred             HHHHhhhccCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968          174 DAVEALADENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG  251 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~  251 (319)
                      +.+++.+.++..+|++.-. ....|. ..+.+.++++.++|+++|+++|+||++.++...|..+ ....+.-.+. |+  
T Consensus       191 ~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PD-i~--  266 (422)
T PRK05630        191 RSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPD-IM--  266 (422)
T ss_pred             HHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCC-ee--
Confidence            3444545556666666652 555676 4567789999999999999999999998775444321 1111221122 33  


Q ss_pred             cCccccCCCc-ceeeEEEeeC
Q 020968          252 SISKRWIVPG-WRLGWLVTSD  271 (319)
Q Consensus       252 s~sK~~~~~G-~r~G~i~~~~  271 (319)
                      +++|.+ ..| ..+|++++++
T Consensus       267 t~gK~l-~gG~~p~~av~~~~  286 (422)
T PRK05630        267 CVGKAL-TGGFMSFAATLCTD  286 (422)
T ss_pred             eeechh-hcCccccceeeccH
Confidence            779985 446 5789998853

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.05  E-value=2.6e-08  Score=93.89  Aligned_cols=216  Identities=17%  Similarity=0.164  Sum_probs=124.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC--CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +..++||..|--.... ---.|.+.+++.+++......  .|..    .+.+..+++.+.+..+  ...+.+++++++++
T Consensus        52 G~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE  124 (457)
T PRK05639         52 GNVFIDFLAGAAAAST-GYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSGSD  124 (457)
T ss_pred             CCEEEECCcCHHhhcc-CCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCchHH
Confidence            5667888776321111 134578999999988753211  1222    2333445555544322  22368999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCCC-------------eEEEEeccCCCC--Cc----CCH------
Q 020968          122 AIEVILTVLA--RPGANILLPRPGFPYYEARAT-HSHL-------------EVRHFDLLPAKG--WE----VDL------  173 (319)
Q Consensus       122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~----~d~------  173 (319)
                      |+..+++...  ....+|+....+|++....+. ..+.             .+..++......  +.    .+.      
T Consensus       125 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  204 (457)
T PRK05639        125 AVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINR  204 (457)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHH
Confidence            9999988653  233678888888877433222 1111             122233211000  00    022      


Q ss_pred             --HHHHhhh------ccCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968          174 --DAVEALA------DENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI  244 (319)
Q Consensus       174 --~~l~~~l------~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~  244 (319)
                        +.+++.+      .++..+|++.-.....|. ..+..-++++.++|+++|+++|+||++.+|...|..+. ...++-.
T Consensus       205 ~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~  283 (457)
T PRK05639        205 FLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWFEVK  283 (457)
T ss_pred             HHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhcCCC
Confidence              2344433      234455655544555676 45677799999999999999999999988654443211 1112222


Q ss_pred             CCeEEEecCccccCCCcceeeEEEeeC
Q 020968          245 VPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       245 ~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .. |++  ++|.+ ..|+.+|.+++.+
T Consensus       284 PD-iv~--~gK~l-~gG~pi~av~~~~  306 (457)
T PRK05639        284 PD-LII--FGKGV-ASGMGLSGVIGRK  306 (457)
T ss_pred             CC-EEE--echhh-cCCCcceeEEehH
Confidence            22 333  79996 4578999999853

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.05  E-value=1.6e-09  Score=97.23  Aligned_cols=217  Identities=16%  Similarity=0.157  Sum_probs=147.3

Q ss_pred             CCcHHHHHHHHHHhhc-CC-CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968           62 RTASVAVDAIVHSVRS-AR-FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL  139 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~-~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~  139 (319)
                      +..+.+.+++...--. +. ...-+...-+.++++.+|+|+.       .++.+++..| .......+.+++.+|.-|+.
T Consensus       155 ~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiS  226 (519)
T KOG1357|consen  155 PCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLIIS  226 (519)
T ss_pred             cCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCcceee
Confidence            5556666666654211 11 1122233345677888888873       3556677666 44555667888999999999


Q ss_pred             cCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------C------ceEEEEcCCCCccccccCHHHHH
Q 020968          140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------N------TVALVIINPGNPCGNVYTYQHLQ  206 (319)
Q Consensus       140 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~------~~~v~l~~p~nptG~~~~~~~l~  206 (319)
                      ....|.....-++..|+.+..+..+       |.++||+.+++       +      ..+|++......-|.+   ..+.
T Consensus       227 DelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~Lp  296 (519)
T KOG1357|consen  227 DELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDLP  296 (519)
T ss_pred             ccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---cccH
Confidence            9999999888999999998877753       56666666542       1      1233344555566777   5589


Q ss_pred             HHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968          207 KIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS  284 (319)
Q Consensus       207 ~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  284 (319)
                      +++.+++++..+++.||+++.-..+  |.....+.-.++.+..|.+++|+|+|+..|   ||+.+++        ++++.
T Consensus       297 ~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--------~lid~  365 (519)
T KOG1357|consen  297 EVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--------ELIDY  365 (519)
T ss_pred             HHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcH--------HHHhh
Confidence            9999999999999999999975543  333333333455566799999999999999   9999864        46666


Q ss_pred             HHHhhhh----cCCcchHHHHHHHHHH
Q 020968          285 IKSFLNI----SSDPATFIQFLKSSRK  307 (319)
Q Consensus       285 ~~~~~~~----~~~~~~~~q~~~~~~l  307 (319)
                      ++.....    .+.+++++|..+..+.
T Consensus       366 lrt~s~~~~yat~~sppvaqq~~ssl~  392 (519)
T KOG1357|consen  366 LRTPSPSALYATSLSPPVAQQILTSVK  392 (519)
T ss_pred             hccCCCceeecccCChHHHHHHHHHHH
Confidence            6644321    3456788888877643

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.03  E-value=1.6e-08  Score=100.36  Aligned_cols=174  Identities=18%  Similarity=0.176  Sum_probs=120.7

Q ss_pred             CCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC-CHHHHHHHHHHHhcC-------C-CCEEEEcCCCCcchH
Q 020968           81 NCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GCTQAIEVILTVLAR-------P-GANILLPRPGFPYYE  148 (319)
Q Consensus        81 ~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~-G~t~ai~~~~~~l~~-------~-gd~Vl~~~p~~~~~~  148 (319)
                      +.|.|   ..|+-++...+.+++.+..|    .+.+-+.+ ++.+|..+++.++..       + .++|+++.-.|....
T Consensus       530 hPyqp~e~sQG~lq~i~elq~~l~eLtG----md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp  605 (954)
T PRK12566        530 HPFAPREQAEGYRAMIDELEAWLCAITG----FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP  605 (954)
T ss_pred             CCCCchhhhcCHHHHHHHHHHHHHHHHC----CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence            46766   67776666666666666544    34445555 456566556655431       2 367889888886656


Q ss_pred             HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCC
Q 020968          149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY  225 (319)
Q Consensus       149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~  225 (319)
                      ..+...|++++.++.++  +..+|+++|++.++   ++..+|++++|++-.+..   .++++|+++++++|+++++|.++
T Consensus       606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~  680 (954)
T PRK12566        606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN  680 (954)
T ss_pred             HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence            66888999999999864  34799999999987   567778888888766554   66999999999999999999998


Q ss_pred             CCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEEEe
Q 020968          226 DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVT  269 (319)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~  269 (319)
                      ..-..   .......++   -.|+.++++|+|+.|    |.-+|.+.+
T Consensus       681 ~~a~~---~l~~Pg~~G---ADi~~~s~HKtf~~P~G~GGP~vG~iav  722 (954)
T PRK12566        681 LNAQV---GLARPADIG---ADVSHMNLHKTFCIPHGGGGPGMGPIGV  722 (954)
T ss_pred             hhhcc---CCCChhhcC---CCEEEecCCcccCcCccCCCCccchhhh
Confidence            63111   111112233   349999999998754    555666544

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.03  E-value=7.2e-08  Score=90.83  Aligned_cols=255  Identities=15%  Similarity=0.075  Sum_probs=145.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+||+..|--...- ---.|.+.+++.+++......  .......+.+..+++.+.+..+.  ..+.+++++++++|
T Consensus        52 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGseA  126 (453)
T PRK06943         52 DGRRYLDAISSWWVNLF-GHANPRINAALKDQLDTLEHA--MLAGCTHEPAIELAERLAALTGG--TLGHAFFASDGASA  126 (453)
T ss_pred             CCCEEEEcchHHHHhcC-CCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCCHHH
Confidence            36678888766311101 134588889999988753211  11111224445566666543321  23589999999999


Q ss_pred             HHHHHHHhc-------CC-CCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccCCCC--Cc--------C
Q 020968          123 IEVILTVLA-------RP-GANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLPAKG--WE--------V  171 (319)
Q Consensus       123 i~~~~~~l~-------~~-gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~~~--~~--------~  171 (319)
                      +..+++...       .+ ..+|+....+|++....+. ..|.            .+..++.....+  +.        -
T Consensus       127 ve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  206 (453)
T PRK06943        127 VEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAAR  206 (453)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHH
Confidence            999988652       12 3678888888877432221 1111            112222211000  00        1


Q ss_pred             CHHHHHhhhc---cCceEEEEcC-CCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          172 DLDAVEALAD---ENTVALVIIN-PGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       172 d~~~l~~~l~---~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                      +++.+++.+.   ++..+|++.- .....|. ..+.+-++++.++|++||+++|.||++.++...|..+ ....++-.+.
T Consensus       207 ~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~gv~PD  285 (453)
T PRK06943        207 ALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAGVWPD  285 (453)
T ss_pred             HHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCCCCCC
Confidence            2466676664   3455666654 2555666 5677789999999999999999999999886555322 1222222233


Q ss_pred             eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH-------hhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-------FLNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      ++   .++|..+ .| +.+|.+++.+        ++.+.+..       ....+.+.++++..+....+  ++++++.+
T Consensus       286 iv---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~  352 (453)
T PRK06943        286 FL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLA  352 (453)
T ss_pred             eE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence            44   3599964 67 5899999854        46555542       12223345666655554443  44444433

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.03  E-value=2.6e-08  Score=93.11  Aligned_cols=256  Identities=16%  Similarity=0.166  Sum_probs=143.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|.-...-. --.|.+.+++.+++.........  ....+.+..+++.+.+..+  -..+.+++++++++|
T Consensus        41 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEA  115 (428)
T PRK07986         41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTP--QPLECVFLADSGSVA  115 (428)
T ss_pred             CCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHH
Confidence            467788887763211111 23588999999888763321111  1122445556666654332  134689999999999


Q ss_pred             HHHHHHHhcC-------CCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCC---CC-cCCHHHHH
Q 020968          123 IEVILTVLAR-------PGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAK---GW-EVDLDAVE  177 (319)
Q Consensus       123 i~~~~~~l~~-------~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~---~~-~~d~~~l~  177 (319)
                      +..+++....       ...+|+....+|++....+... +-             .+..++.....   .+ .-|++.++
T Consensus       116 ve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~  195 (428)
T PRK07986        116 VEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFA  195 (428)
T ss_pred             HHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHH
Confidence            9999885432       2368888888887643222211 11             11112211000   01 12456777


Q ss_pred             hhhc---cCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEec
Q 020968          178 ALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGS  252 (319)
Q Consensus       178 ~~l~---~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s  252 (319)
                      +.++   ++..+|++... ..-.|. ..+...+++|.++|+++|+++|+||++.++...|..+. ...+.-.+. |+  .
T Consensus       196 ~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa-~~~~gv~PD-i~--t  271 (428)
T PRK07986        196 RLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA-CEHAGIAPD-IL--C  271 (428)
T ss_pred             HHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeee-ecccCCCCC-EE--E
Confidence            7764   23445555542 444565 45668899999999999999999999977644443221 111221122 33  4


Q ss_pred             CccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          253 ISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       253 ~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      ++|.+ ..| +.+|.+++.+        ++.+.+...      ...+...++++..++...+  ++++++.++
T Consensus       272 ~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~  335 (428)
T PRK07986        272 LGKAL-TGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQ  335 (428)
T ss_pred             echhh-hCCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence            89997 466 5788877743        466666431      2222334555555544433  344444443

>PRK06149 hypothetical protein; Provisional

Probab=99.02  E-value=5.9e-08  Score=99.48  Aligned_cols=249  Identities=13%  Similarity=0.107  Sum_probs=137.4

Q ss_pred             CCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCCCC-CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +..++||..|...    ++ -.|.+.+++.+++....... |    . .+....+++.+.+..  +-..+.++++++|++
T Consensus       584 G~~ylD~~~~~~~----lGh~hp~v~~Ai~~q~~~l~~~~~~----~-~~~~~elae~L~~~~--p~~~~~v~f~~SGsE  652 (972)
T PRK06149        584 GRSYLDMVNNVTV----LGHGHPRLAAAAARQWSLLNTNSRF----H-YAAVAEFSERLAALA--PDGLDTVFLVNSGSE  652 (972)
T ss_pred             CCEEEECCCCccc----cCCCCHHHHHHHHHHHHhccccccc----c-CHHHHHHHHHHHHhC--CCCcCEEEEeCCchH
Confidence            5667788766422    33 57899999998887533211 2    1 133344444444322  112468999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-C-----C--------eEEEEeccCC--CCCc-CC-----HHHHH
Q 020968          122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-H-----L--------EVRHFDLLPA--KGWE-VD-----LDAVE  177 (319)
Q Consensus       122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~d-----~~~l~  177 (319)
                      |+..+++...  ....+|+...-+|++....+... +     .        .+..++....  ..|. .+     .+.++
T Consensus       653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~  732 (972)
T PRK06149        653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV  732 (972)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence            9999988432  12357777777777543222110 0     0        0122221110  0111 11     13333


Q ss_pred             hhhc------cCceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          178 ALAD------ENTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       178 ~~l~------~~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      +.++      ++..+|++.......| ...++.-++++.++|+++|+++|.||++.+|...|........++-...++  
T Consensus       733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--  810 (972)
T PRK06149        733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--  810 (972)
T ss_pred             HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--
Confidence            3321      2344555544333345 566777799999999999999999999987755553222222222222233  


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH--hhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS--FLNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                       +++|.+ ..|..+|.+++.+        ++.+.+..  ....+.+.++++..+....+  ++++++.+
T Consensus       811 -t~gK~l-g~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~  869 (972)
T PRK06149        811 -TMAKGM-GNGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQE  869 (972)
T ss_pred             -Eecccc-cCCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence             789996 4679999999854        46655542  11112345666665554443  34444443

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.02  E-value=6.6e-08  Score=90.90  Aligned_cols=220  Identities=17%  Similarity=0.185  Sum_probs=125.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--...- ---.|.+.+++.+++..-..  +.......+.+..+++.+.+..+  -..+.+++++++++|
T Consensus        47 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseA  121 (445)
T PRK09221         47 DGRKILDGTAGLWCCNA-GHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSES  121 (445)
T ss_pred             CCCEEEEccccHhhccC-CCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHH
Confidence            46778888777322111 13458888999988875321  11111112334446666554322  124689999999999


Q ss_pred             HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccC-C--CCCcC-------
Q 020968          123 IEVILTVLAR--------PGANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLP-A--KGWEV-------  171 (319)
Q Consensus       123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~-~--~~~~~-------  171 (319)
                      +..+++....        ...+|+....+|++....+. ..|.            .+..++... .  ..+..       
T Consensus       122 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (445)
T PRK09221        122 VDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGA  201 (445)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHH
Confidence            9999875431        12578888888876432221 1110            112222110 0  00110       


Q ss_pred             -CHHHHHhhhc----cCceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          172 -DLDAVEALAD----ENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       172 -d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                       ..+.+++.+.    ++..+|++.......|.+. +.+-++++.++|+++|+++|+||++.++...|.... ...+.-.+
T Consensus       202 ~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~-~~~~gv~P  280 (445)
T PRK09221        202 ELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFA-AERFGVTP  280 (445)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhH-HHhcCCCC
Confidence             1346666664    2345566555566677754 566699999999999999999999987654443221 11122112


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeC
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+   -+++|.++...+.+|.+++.+
T Consensus       281 Di---~~~gK~l~gG~~Pi~av~~~~  303 (445)
T PRK09221        281 DI---ITFAKGLTNGAIPMGAVIASD  303 (445)
T ss_pred             CE---EEeccccccCcccceeeEEcH
Confidence            22   378999644437789988753

>PRK07036 hypothetical protein; Provisional

Probab=99.01  E-value=4.3e-08  Score=92.65  Aligned_cols=255  Identities=17%  Similarity=0.157  Sum_probs=142.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..++|+..|.-...-. --.|.+.+++.+++..... ..+..  ...+.+..+++.+.+...  -..+.+++++++++
T Consensus        49 dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse  123 (466)
T PRK07036         49 DGRRYLDGIGGMWCVNVG-YGREEMADAIADQARRLPYYTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGST  123 (466)
T ss_pred             CCCEEEECcccHHhhcCC-CCCHHHHHHHHHHHHhCcccccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCchH
Confidence            467788887663221111 3368899999988875321 11110  123445556666655322  12468999999999


Q ss_pred             HHHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCC--CCcCC------
Q 020968          122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAK--GWEVD------  172 (319)
Q Consensus       122 ai~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~~d------  172 (319)
                      |+..+++...      . + ..+|+....+|++....+.. .+.            .+..++.....  .++..      
T Consensus       124 Ave~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  203 (466)
T PRK07036        124 AVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCD  203 (466)
T ss_pred             HHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHH
Confidence            9999988642      1 2 26788888888775433221 111            12222211100  01111      


Q ss_pred             --HHHHHhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc-ccCCC
Q 020968          173 --LDAVEALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG-VFGSI  244 (319)
Q Consensus       173 --~~~l~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~  244 (319)
                        .+.+++.+.    ++..+|++.......|. ..++.-++++.++|++||+++|.||++.+|...|... ... .+.-.
T Consensus       204 ~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~gv~  282 (466)
T PRK07036        204 FLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFGIQ  282 (466)
T ss_pred             HHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcCCC
Confidence              233444442    24455655554555576 4567779999999999999999999998875544322 111 12222


Q ss_pred             CCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hccccc
Q 020968          245 VPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNSF  313 (319)
Q Consensus       245 ~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~~  313 (319)
                      +.++   +++|.+ ..| +.+|.+++.+        ++.+.+...        ...+.+.++++..+....+  ++++++
T Consensus       283 PDiv---t~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l  350 (466)
T PRK07036        283 PDII---TFAKGL-TSGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGL  350 (466)
T ss_pred             CCEE---EEcccc-ccCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCH
Confidence            2233   569995 557 5899999853        466655421        1123345666655544433  344444


Q ss_pred             cc
Q 020968          314 LK  315 (319)
Q Consensus       314 ~~  315 (319)
                      .+
T Consensus       351 ~~  352 (466)
T PRK07036        351 CE  352 (466)
T ss_pred             HH
Confidence            33

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.01  E-value=3.4e-08  Score=92.39  Aligned_cols=217  Identities=17%  Similarity=0.147  Sum_probs=123.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--..... --.|.+.+++++++.+......  .....+.+..+++.+.....  -+.+.+++++++++|
T Consensus        42 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA  116 (429)
T PRK06173         42 DGRRLIDGMSSWWAALHG-YNHPRLNAAATNQLAKMSHIMF--GGFTHEPAVELAQKLLEILP--PSLNKIFFADSGSVA  116 (429)
T ss_pred             CCCEEEEccchHHhccCC-CCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchHH
Confidence            467788887663111111 2358899999988876322111  00112333445555544221  134689999999999


Q ss_pred             HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHh-hCCC-------------eEEEEeccCCCCCc-----CCHHH
Q 020968          123 IEVILTVLAR-------P-GANILLPRPGFPYYEARAT-HSHL-------------EVRHFDLLPAKGWE-----VDLDA  175 (319)
Q Consensus       123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~~~-----~d~~~  175 (319)
                      +..+++....       + ..+|+....+|++....+. ..+-             .+..++.. ...+.     -+++.
T Consensus       117 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~l~~  195 (429)
T PRK06173        117 VEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQP-SIKFGEEWNDEAIEP  195 (429)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCC-CcccchhHHHHHHHH
Confidence            9999876431       2 3578888888877321111 1110             01112211 00000     13556


Q ss_pred             HHhhhc---cCceEEEEcCC-CCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          176 VEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       176 l~~~l~---~~~~~v~l~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      +++.+.   ++..++++.-. ....|.+ .++.-++++.++|++||+++|+||++.++...|..+. ...++-.+. |++
T Consensus       196 l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PD-iv~  273 (429)
T PRK06173        196 LQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFA-LEHAGVVPD-IMC  273 (429)
T ss_pred             HHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchH-HHhcCCCCC-EEE
Confidence            667664   34455665542 5556765 6778899999999999999999999977644443221 111221122 433


Q ss_pred             ecCccccCCCc-ceeeEEEee
Q 020968          251 GSISKRWIVPG-WRLGWLVTS  270 (319)
Q Consensus       251 ~s~sK~~~~~G-~r~G~i~~~  270 (319)
                        ++|.+ ..| +.++.+++.
T Consensus       274 --~gK~l-~gG~~p~~a~~~~  291 (429)
T PRK06173        274 --IGKAL-TGGYLTLSATITT  291 (429)
T ss_pred             --eehhh-hCCccccceEEec
Confidence              89997 466 467777764

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.00  E-value=7.1e-08  Score=92.94  Aligned_cols=141  Identities=16%  Similarity=0.167  Sum_probs=104.3

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC---------C-------------------
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---------P-------------------  133 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~---------~-------------------  133 (319)
                      .|...++...+++.+.+++.+..|.+  ...=.+|+|||.|+..++....+         .                   
T Consensus       114 ~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~  191 (608)
T TIGR03811       114 AYESSPATSQMEEEVGKEFATLMGYK--NGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPT  191 (608)
T ss_pred             ccccCchHHHHHHHHHHHHHHHhCCC--CCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccc
Confidence            45555677899999999999888765  23345889999887765433211         0                   


Q ss_pred             ------------------------C------CEEEEcCCCCcchHHHHhhCCCe---EEEEeccCCCCCcCCHHHHHhhh
Q 020968          134 ------------------------G------ANILLPRPGFPYYEARATHSHLE---VRHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       134 ------------------------g------d~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                                              |      -+|+++...|.++.+.+..+|+.   ++.|+++  +++.+|++.|++.+
T Consensus       192 ~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD--~~~rmd~~~L~~~I  269 (608)
T TIGR03811       192 KEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVD--SNYRMDINELEKII  269 (608)
T ss_pred             ccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecC--CCCcCCHHHHHHHH
Confidence                                    0      05778888899999999999995   7888875  45789999999887


Q ss_pred             cc----C--ceEEEEcCCCCccccccCHHHHHHHHHHH---HHcCC--EEEEeCCCCCcc
Q 020968          181 DE----N--TVALVIINPGNPCGNVYTYQHLQKIAETA---KKLGI--MVIADEVYDHLA  229 (319)
Q Consensus       181 ~~----~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~---~~~~~--~li~D~a~~~~~  229 (319)
                      .+    +  +-+|+-+..+..+|.+   +++++|+++|   +++|+  ++.+|.||+++.
T Consensus       270 ~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~  326 (608)
T TIGR03811       270 RKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG  326 (608)
T ss_pred             HHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence            53    2  2345556668899999   6677777776   67887  699999999853

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PRK06917 hypothetical protein; Provisional

Probab=99.00  E-value=8.8e-08  Score=90.11  Aligned_cols=255  Identities=16%  Similarity=0.107  Sum_probs=143.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+||+..|--.... =--.|.+.+++.+++....+ .+... ...+.+..+++.+.+...  -..+.+++++++++|
T Consensus        29 dG~~ylD~~~g~~~~~l-Gh~hp~v~~Ai~~ql~~~~~-~~~~~-~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA  103 (447)
T PRK06917         29 NGNKYFDGSSGAVTAGI-GHGVKEIADAIKEQAEEVSF-VYRSQ-FTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEA  103 (447)
T ss_pred             CCCEEEECchhHHhccC-CCCCHHHHHHHHHHHhhCcC-ccccc-cCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHHH
Confidence            46778888776322111 13368899999998876422 11111 113445556666655322  123589999999999


Q ss_pred             HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHh-hCCCe------------EEEEeccCCCCC--cC--------
Q 020968          123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARAT-HSHLE------------VRHFDLLPAKGW--EV--------  171 (319)
Q Consensus       123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~-~~g~~------------~~~~~~~~~~~~--~~--------  171 (319)
                      +..+++....       +| .+|+....+|++....+. ..+..            +..++......+  ..        
T Consensus       104 ve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  183 (447)
T PRK06917        104 NETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLA  183 (447)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHH
Confidence            9999986521       23 678888888877543332 22211            111111000000  00        


Q ss_pred             CHHHHHhhhc----cCceEEEEcCCC-Ccccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          172 DLDAVEALAD----ENTVALVIINPG-NPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       172 d~~~l~~~l~----~~~~~v~l~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                      +.+.+++.++    ++..+|++.-.. +..|. ..+.+-++++.++|+++|+++|.||++.+|...|.... ...+.-.+
T Consensus       184 ~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~gv~P  262 (447)
T PRK06917        184 CATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHWGVEP  262 (447)
T ss_pred             HHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhcCCCC
Confidence            2355666664    234555555433 34455 55677899999999999999999999988654443221 11222222


Q ss_pred             CeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          246 PVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      .++   +++|.+ ..|. .+|.+++.+        ++.+.+...     ...+.+.++++..+....+  ++++++.+
T Consensus       263 Di~---~~gK~l-~~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~  328 (447)
T PRK06917        263 DIM---TLGKGL-GAGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPE  328 (447)
T ss_pred             CEE---Eeeehh-ccCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHH
Confidence            233   579995 5575 899998853        466655421     1123345666655544433  34444443

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.99  E-value=3.4e-08  Score=84.55  Aligned_cols=191  Identities=18%  Similarity=0.236  Sum_probs=123.6

Q ss_pred             HHHHHHHHHHhhcC----CCCCCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968           65 SVAVDAIVHSVRSA----RFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL  139 (319)
Q Consensus        65 ~~~~~a~~~~~~~~----~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~  139 (319)
                      ..+++++++.--+.    ....|+. +-|-+.|.+..|+.++.    ...--+.-+. ++|+||..++..+++|||+.+.
T Consensus        38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~  112 (416)
T COG4100          38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGA----EAALVRPQII-SGTHAIACALFGILRPGDELLY  112 (416)
T ss_pred             HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhcc----ccceeeeeee-cchhHHHHHHHhccCCCCeEEE
Confidence            35666665432111    1235553 34656666666666632    2111122333 4689999999999999999874


Q ss_pred             -cCCCCcchHHH----------HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC-CCccccccCHHHHHH
Q 020968          140 -PRPGFPYYEAR----------ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-GNPCGNVYTYQHLQK  207 (319)
Q Consensus       140 -~~p~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p-~nptG~~~~~~~l~~  207 (319)
                       ..--|.....+          ++..|+....+++..+  ..+|.+.++..+++++++|-+... ..-.--.++.+++++
T Consensus       113 i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~--gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~  190 (416)
T COG4100         113 ITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTAD--GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEE  190 (416)
T ss_pred             ecCCcchhHHHHhccCCCCcccHHHhCcceeecccccC--CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHH
Confidence             44555544433          4566777777777543  469999999999999999887743 333333567799999


Q ss_pred             HHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc--eeeEEEee
Q 020968          208 IAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW--RLGWLVTS  270 (319)
Q Consensus       208 i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~--r~G~i~~~  270 (319)
                      ++++.++.  |+++++|++|++|+-..++ ..   ..   ..+..+|+-|.=|. |+  --||+.+.
T Consensus       191 ~i~~vk~inpn~ivFVDNCYGEFvE~~EP-t~---vG---aDliAGSLIKNpGG-giaktGGYiaGk  249 (416)
T COG4100         191 MITFVKEINPNVIVFVDNCYGEFVEEKEP-TH---VG---ADLIAGSLIKNPGG-GIAKTGGYIAGK  249 (416)
T ss_pred             HHHHHHhcCCCEEEEEeccchhhhhccCc-cc---cc---hhhhccceeeCCCC-ceeeccceeech
Confidence            99999875  7999999999998854322 22   12   23788899898433 22  12666653

>PRK07481 hypothetical protein; Provisional

Probab=98.99  E-value=1.4e-07  Score=88.93  Aligned_cols=228  Identities=16%  Similarity=0.143  Sum_probs=129.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|--.... =--.|.+.+++++++......... .....+.+..+++.+.+..+. -..+.+++++++++|
T Consensus        40 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGsEA  116 (449)
T PRK07481         40 DGKKLLDGVGGLWNVNV-GHNREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFAP-EGMRRVFFSSGGSDS  116 (449)
T ss_pred             CCCEEEECchhHHhhcC-CCCCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchHHH
Confidence            46778888766321111 134578889999888764321100 011224445566666553321 124689999999999


Q ss_pred             HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCC--CCc-CCHHHH--
Q 020968          123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAK--GWE-VDLDAV--  176 (319)
Q Consensus       123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~-~d~~~l--  176 (319)
                      +..+++....       +| .+|+...-+|++....+... +.            .+..++.....  .|. -|++.+  
T Consensus       117 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~  196 (449)
T PRK07481        117 VETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELAR  196 (449)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHH
Confidence            9999886431       23 57888888887754322221 11            11222111000  011 133333  


Q ss_pred             ------Hhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          177 ------EALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       177 ------~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                            ++.+.    +++.+|++.-.....|. ..+..-++++.++|+++|+++|.||++.+|...|.... ...++-.+
T Consensus       197 ~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~P  275 (449)
T PRK07481        197 ICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGWGVKP  275 (449)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhcCCCC
Confidence                  33332    34555665544555576 45667799999999999999999999998755443221 11222222


Q ss_pred             CeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIK  286 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~  286 (319)
                      .++   .++|.+ ..| +.+|.+++.+        ++.+.+.
T Consensus       276 Div---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~  305 (449)
T PRK07481        276 DIM---CLAKGI-TSGYVPLGATMVNA--------RIADAFE  305 (449)
T ss_pred             CEE---EEeecc-cCCCcCceEEEEcH--------HHHHHHh
Confidence            334   459995 456 5899999853        4666554

>PRK07480 putative aminotransferase; Validated

Probab=98.98  E-value=7.2e-08  Score=90.89  Aligned_cols=256  Identities=16%  Similarity=0.156  Sum_probs=141.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+||+..|--.... -.-.|.+.+++.+++....... .......+.+..+++.+.+..+  -+.+.+++++++++|
T Consensus        48 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA  123 (456)
T PRK07480         48 EGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEA  123 (456)
T ss_pred             CCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHH
Confidence            46678888766321111 1336889999999887643211 0001223445556666654332  134689999999999


Q ss_pred             HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHH-hhCCCe------------EEEEeccCCC--CCcCC-------
Q 020968          123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARA-THSHLE------------VRHFDLLPAK--GWEVD-------  172 (319)
Q Consensus       123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~-~~~g~~------------~~~~~~~~~~--~~~~d-------  172 (319)
                      +..+++....       +| .+|+....+|++....+ ...|..            +..++....-  .+..+       
T Consensus       124 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  203 (456)
T PRK07480        124 NDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLA  203 (456)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHH
Confidence            9999875431       22 46888888887643222 111111            1111110000  00011       


Q ss_pred             -HHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          173 -LDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       173 -~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                       .+.+++.+.    ++..+|++.......|.+ .+.+-++++.++|+++|+++|.||++.+|...|..+ ....++-.+.
T Consensus       204 ~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~PD  282 (456)
T PRK07480        204 AARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFGIKPD  282 (456)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcCCCCC
Confidence             245554442    345566665555556764 566669999999999999999999998875545322 1122222222


Q ss_pred             eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH----h-hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS----F-LNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      ++   +++|.+ ..| +.+|.+++.+        ++.+.+..    . ...+.+.++++..+....+  ++++++.+
T Consensus       283 iv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~  347 (456)
T PRK07480        283 LM---TIAKGL-TSGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVE  347 (456)
T ss_pred             ee---eeehhh-ccCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence            33   579995 456 4899998853        46665521    1 2223445666666655544  34444443

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.98  E-value=1.1e-07  Score=89.80  Aligned_cols=256  Identities=15%  Similarity=0.076  Sum_probs=144.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCC---CCCCcEEEeCCH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK---LSPDDVYLTLGC  119 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~---~~~~~i~~~~G~  119 (319)
                      ++..++|+..|.-..... -..|.+.+++.+++..-..  ........+.+..+++.+.+.....   -+.+.+++++++
T Consensus        62 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sG  138 (472)
T PRK08742         62 DGRRYLDAVSSWWTNLFG-HAEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNG  138 (472)
T ss_pred             CCCEEEEcCccHHhccCC-CCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCc
Confidence            466788887773211111 3467888999888764211  1111111244555666665432210   123689999999


Q ss_pred             HHHHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCC--CCcC-----
Q 020968          120 TQAIEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAK--GWEV-----  171 (319)
Q Consensus       120 t~ai~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~~-----  171 (319)
                      ++|+..+++....       + ..+|+....+|++....+... +.            .+..++.....  .++.     
T Consensus       139 SEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~  218 (472)
T PRK08742        139 SAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDY  218 (472)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHH
Confidence            9999999886531       2 368888888887754333222 11            11222211000  0011     


Q ss_pred             ---CHHHHHhhhc---cCceEEEEcC-CCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          172 ---DLDAVEALAD---ENTVALVIIN-PGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       172 ---d~~~l~~~l~---~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                         +++.+++.+.   ++..+|++.- .....|. ..++.-++++.++|+++|+++|.||++.+|...|..+. ...++-
T Consensus       219 ~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a-~e~~gv  297 (472)
T PRK08742        219 ALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFA-CEQAGV  297 (472)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchH-HHhcCC
Confidence               2456666663   3445555554 2555676 55777799999999999999999999998866553321 222222


Q ss_pred             CCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh-------hhhcCCcchHHHHHHHHHH--hccccc
Q 020968          244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQFLKSSRK--LKRNSF  313 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l--~~~~~~  313 (319)
                      .+.++   .++|.+ ..| +.+|.+++.+        ++.+.+...       ...+.+.++++..+....+  ++++++
T Consensus       298 ~PDiv---~~gKgl-~gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l  365 (472)
T PRK08742        298 MPDLL---CLSKGL-TGGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDV  365 (472)
T ss_pred             CCCEE---EEcccc-cCCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCH
Confidence            23344   359995 557 4899998853        455555321       1223345666655544443  344444


Q ss_pred             c
Q 020968          314 L  314 (319)
Q Consensus       314 ~  314 (319)
                      .
T Consensus       366 ~  366 (472)
T PRK08742        366 I  366 (472)
T ss_pred             H
Confidence            3

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=98.97  E-value=2.1e-08  Score=91.05  Aligned_cols=239  Identities=17%  Similarity=0.154  Sum_probs=138.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..... --.|.+.+++++++.....  ........+....+++.+.+..+.  ..+.+++++++++|
T Consensus        14 dG~~~lD~~~~~~~~~lG-h~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseA   88 (339)
T PF00202_consen   14 DGREYLDFMSGYGSVNLG-HNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEA   88 (339)
T ss_dssp             TSEEEEESSHHHHTTTT--BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHH
T ss_pred             CCCEEEECCCCccceecC-CCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhcccc--ccceeeeccCchHH
Confidence            466788887663221111 2347888999988776432  121223345566677766664421  45799999999999


Q ss_pred             HHHHHHHhc-------C-CCCEEEEcCCCCcchHHHHhh-CC------------CeEEEEeccCCCCCcCCHHH------
Q 020968          123 IEVILTVLA-------R-PGANILLPRPGFPYYEARATH-SH------------LEVRHFDLLPAKGWEVDLDA------  175 (319)
Q Consensus       123 i~~~~~~l~-------~-~gd~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~~~d~~~------  175 (319)
                      +..+++...       . ...+|+....+|++....+.. .+            ..+..+|..       ++..      
T Consensus        89 ve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~  161 (339)
T PF00202_consen   89 VEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEEQA  161 (339)
T ss_dssp             HHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHHHH
T ss_pred             HHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhHHH
Confidence            999998765       1 347899888888764322211 11            123444432       2222      


Q ss_pred             ----HHhh---h-ccCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          176 ----VEAL---A-DENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       176 ----l~~~---l-~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                          +++.   . .++..++++.-.....|. .++.+-++++.++|+++|+++|.||++.++...|+.+ ....+.-.+.
T Consensus       162 ~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PD  240 (339)
T PF00202_consen  162 CLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPD  240 (339)
T ss_dssp             HHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSS
T ss_pred             HHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccCc
Confidence                2222   2 334555655554444564 5566779999999999999999999999987666432 2222333233


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHH
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSR  306 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~  306 (319)
                      ++ +  ++|.+ ..|+.+|.+++.+        ++.+.+... ...+...++++..+....
T Consensus       241 iv-~--~gK~l-~gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~  289 (339)
T PF00202_consen  241 IV-T--FGKGL-GGGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALAT  289 (339)
T ss_dssp             EE-E--EEGGG-GTTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred             cc-c--cccch-hhhhhcccccccc--------hhhccccccccccccccchHhhhhhhhH
Confidence            44 3  46996 4569999999853        344444221 122334455555554443

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK07483 hypothetical protein; Provisional

Probab=98.97  E-value=9.2e-08  Score=89.88  Aligned_cols=255  Identities=18%  Similarity=0.175  Sum_probs=142.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|--...- =--.|.+.++++++++...+..  ......+....+++.+.+...  -..+.+++++++++|
T Consensus        28 dG~~ylD~~~g~~~~~l-Gh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA  102 (443)
T PRK07483         28 TGKRYLDASGGAAVSCL-GHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEA  102 (443)
T ss_pred             CCCEEEEcCccHhhhcc-CCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHH
Confidence            46778888777322111 1345788899999887632111  111113444556666654322  124689999999999


Q ss_pred             HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCCC---cC-------
Q 020968          123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKGW---EV-------  171 (319)
Q Consensus       123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~---~~-------  171 (319)
                      +..+++....       +| .+|+....+|++....+.. .|.            .+..++....-+.   ..       
T Consensus       103 ve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (443)
T PRK07483        103 VEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQ  182 (443)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHH
Confidence            9999875431       23 5788888888765322221 111            1111211100000   00       


Q ss_pred             -CHHHHHhhhc----cCceEEEEcCCCC-cccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968          172 -DLDAVEALAD----ENTVALVIINPGN-PCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI  244 (319)
Q Consensus       172 -d~~~l~~~l~----~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~  244 (319)
                       .++.+++.+.    ++..+|++....- ..|. ..+.+-++++.++|+++|+++|.||++.++...|.-+ ....+.-.
T Consensus       183 ~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~  261 (443)
T PRK07483        183 RLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDGVA  261 (443)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcCCC
Confidence             0245665443    2445555554332 3354 5577789999999999999999999999875554322 11122222


Q ss_pred             CCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          245 VPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       245 ~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      +.++   +++|.+ ..|+ .+|.+++.+        ++.+.+...     ...+.+.++++..+....+  ++++++.+
T Consensus       262 PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~  328 (443)
T PRK07483        262 PDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLA  328 (443)
T ss_pred             CCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence            2344   459995 5675 899999854        465555421     2223445666655544443  44444443

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.96  E-value=7.7e-08  Score=90.84  Aligned_cols=218  Identities=13%  Similarity=0.091  Sum_probs=126.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++|+..|--...- ---.|.+.+++.++++.-..  ........+.+..+++.+.+..+  ...+.+++++++++|+
T Consensus        55 G~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAv  129 (460)
T PRK06916         55 GNEYYDGVSSIWLNVH-GHQVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVVP--EGLKKVFYSDSGATAV  129 (460)
T ss_pred             CCEEEEcchhHHHhhc-CCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHH
Confidence            5667777655311000 13468889999998876321  11000112334445555544322  1236899999999999


Q ss_pred             HHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCC--CCc--------CC
Q 020968          124 EVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAK--GWE--------VD  172 (319)
Q Consensus       124 ~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~--------~d  172 (319)
                      ..+++....       + ..+|+....+|++....+... |.            .+..++.....  .+.        -+
T Consensus       130 e~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~  209 (460)
T PRK06916        130 EIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKH  209 (460)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHH
Confidence            999886432       3 368888888887744322221 11            11222211000  001        13


Q ss_pred             HHHHHhhhc---cCceEEEEcC-CCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCe
Q 020968          173 LDAVEALAD---ENTVALVIIN-PGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV  247 (319)
Q Consensus       173 ~~~l~~~l~---~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~v  247 (319)
                      ++.+++.++   ++..+|++.- .....|.+ .+.+-++++.++|+++|+++|.||++.++...|..+ ....+.-.+.+
T Consensus       210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv~PDi  288 (460)
T PRK06916        210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVTPDI  288 (460)
T ss_pred             HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCCCCCe
Confidence            455666664   3455666554 35555764 577889999999999999999999998875544321 11122222223


Q ss_pred             EEEecCccccCCCc-ceeeEEEeeC
Q 020968          248 LTLGSISKRWIVPG-WRLGWLVTSD  271 (319)
Q Consensus       248 i~~~s~sK~~~~~G-~r~G~i~~~~  271 (319)
                      +   +++|.+ ..| +.+|.+++.+
T Consensus       289 v---~~gK~l-~gG~~Pi~av~~~~  309 (460)
T PRK06916        289 M---TAGKGL-TGGYLPIAITVTTD  309 (460)
T ss_pred             e---eeehhh-hcCccccceeeecH
Confidence            3   579996 467 5899999854

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.96  E-value=2e-07  Score=83.86  Aligned_cols=230  Identities=15%  Similarity=0.061  Sum_probs=152.3

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCC--HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGI--LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~--~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      +.+-+.|+      ....++..+++...+.......|.-..|.  .+++ .+++.+..    -...+.++++++.+.|+.
T Consensus        29 v~~t~lG~------s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~~~----~~~aea~~ivnnn~aAVl   97 (395)
T COG1921          29 VLMTNLGR------SLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELLCG----LTGAEAAAIVNNNAAAVL   97 (395)
T ss_pred             heeccCCC------ccCCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHHhc----ccchhheeeECCcHHHHH
Confidence            34445565      34568888899888776543355443332  2333 34444422    224678999999999999


Q ss_pred             HHHHHhcCCCCEEEEc---C-CCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968          125 VILTVLARPGANILLP---R-PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~---~-p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  200 (319)
                      +++.++.+++..|+--   . +..++...+++..|.+++.+....    .-...+++.++.+++.+++-++-+|- |.. 
T Consensus        98 l~~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~-~f~-  171 (395)
T COG1921          98 LTLNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNY-GFT-  171 (395)
T ss_pred             HHHhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhccCCeeEEEEeeccc-ccc-
Confidence            9999987644444311   1 577788999999999999887532    25788899999999988876655542 322 


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                      ..-.+++++++|+++|+++++|.+-+......   +.+..+-..+..++++|-.|.+  .|.+-|.+++.        ++
T Consensus       172 ~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e---~~l~~~la~GaDLV~~SgdKll--gGPqaGii~Gk--------Ke  238 (395)
T COG1921         172 GMLSEEELVEIAHEKGLPVIVDLASGALVDKE---PDLREALALGADLVSFSGDKLL--GGPQAGIIVGK--------KE  238 (395)
T ss_pred             ccccHHHHHHHHHHcCCCEEEecCCccccccc---cchhHHHhcCCCEEEEecchhc--CCCccceEech--------HH
Confidence            11237789999999999999999998866422   2233332333459999999995  56678999984        36


Q ss_pred             HHHHHHHhhh-hcCCcchHHHHHHHHH
Q 020968          281 IVDSIKSFLN-ISSDPATFIQFLKSSR  306 (319)
Q Consensus       281 ~~~~~~~~~~-~~~~~~~~~q~~~~~~  306 (319)
                      ++.+++...- ...-+.++.-.++..+
T Consensus       239 lI~~lq~~~l~Ralrv~K~tla~l~~a  265 (395)
T COG1921         239 LIEKLQSHPLKRALRVDKETLAALEAA  265 (395)
T ss_pred             HHHHHHhhhhhhhhhcCcHhHHHHHHH
Confidence            8888876543 2334444444444443

>PRK06062 hypothetical protein; Provisional

Probab=98.95  E-value=1.1e-07  Score=89.59  Aligned_cols=254  Identities=16%  Similarity=0.137  Sum_probs=142.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+||+..|.-...- =--.|.+.+++.+++.....  +.+ ....+.+..+++.+.+..+  -+.+.+++++++++|
T Consensus        51 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA  124 (451)
T PRK06062         51 EGRRYLDFSSQLVNTNI-GHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGADA  124 (451)
T ss_pred             CCCEEEEcccCHHhhcC-CCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHHH
Confidence            36678888776322111 13357899999988876322  121 1223445556666654322  124689999999999


Q ss_pred             HHHHHHHhcC--CCCEEEEcCCCCcchHHHHh-hCCC-----------eEEEEeccCCCC--Cc--CC-------HHHHH
Q 020968          123 IEVILTVLAR--PGANILLPRPGFPYYEARAT-HSHL-----------EVRHFDLLPAKG--WE--VD-------LDAVE  177 (319)
Q Consensus       123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~~g~-----------~~~~~~~~~~~~--~~--~d-------~~~l~  177 (319)
                      ...+++....  ...+|+.....|++....+. ..+.           .+..++......  |.  -|       ++.++
T Consensus       125 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le  204 (451)
T PRK06062        125 NEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLE  204 (451)
T ss_pred             HHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHH
Confidence            9999886432  23678888888877543332 1111           111111110000  10  12       56677


Q ss_pred             hhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEec
Q 020968          178 ALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGS  252 (319)
Q Consensus       178 ~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s  252 (319)
                      +.++    ++..+|++.......|.+ .+..-++++.++|+++|+++|+||++..|...|..+ ....+.-.+.++   +
T Consensus       205 ~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PDi~---t  280 (451)
T PRK06062        205 RVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLI---T  280 (451)
T ss_pred             HHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCCee---e
Confidence            7664    234455555445555765 467779999999999999999999999875444321 111122112233   6


Q ss_pred             CccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh---hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          253 ISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       253 ~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      ++|.+ ..| +.+|.+++.+        ++.+.+...   ...+.+.++++..+....+  ++++++.+
T Consensus       281 ~gK~l-ggG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~  340 (451)
T PRK06062        281 FAKGV-NSGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVE  340 (451)
T ss_pred             echhh-hcCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence            89996 456 4899998853        466655421   2223344555554444433  34444433

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=98.95  E-value=1.1e-08  Score=93.79  Aligned_cols=178  Identities=13%  Similarity=0.067  Sum_probs=112.9

Q ss_pred             CCcHHHHHHHHHHhhcC-CCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEe-CCHHHHHHHHHHHhcCCCCE
Q 020968           62 RTASVAVDAIVHSVRSA-RFNCYSS--TVGILPARRAIADYLNRDLPYKLS-PDDVYLT-LGCTQAIEVILTVLARPGAN  136 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~-~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~-~G~t~ai~~~~~~l~~~gd~  136 (319)
                      ..++++++++.+....- ...++++  ..-+.+.|+.+++++      +.. ..+|+++ +++|.+++.++.++..+ +.
T Consensus        13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~   85 (361)
T TIGR01366        13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-KS   85 (361)
T ss_pred             CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-cc
Confidence            56788888876431110 0123333  233567777777777      333 3478886 55999999999998743 34


Q ss_pred             EEEcCCCCc-chHHHHhhC--CCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHH
Q 020968          137 ILLPRPGFP-YYEARATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK  213 (319)
Q Consensus       137 Vl~~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~  213 (319)
                      +++..-.|. .+...+...  +.++..++...  +..++     ..+.+++++|++++..|.||.+.+   +++|   ++
T Consensus        86 l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~  152 (361)
T TIGR01366        86 LHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVP---VRRP---EG  152 (361)
T ss_pred             cEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceecc---cccc---cc
Confidence            444455553 244445442  22556665532  21222     234568899999999999999977   4444   47


Q ss_pred             HcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          214 KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       214 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      ++|+++++|.+.+.    +..+..+..     -.+++.|..|.++.+|- ++.+++
T Consensus       153 ~~g~~~iVDavqs~----g~~~idv~~-----~D~~~~s~~K~lg~~~G-l~~~~~  198 (361)
T TIGR01366       153 SDDALVVIDATSGA----GGLPVDIAE-----TDVYYFAPQKNFASDGG-LWLAIM  198 (361)
T ss_pred             cCCCeEEEEcCccc----cCCCCCHHH-----CCEEEEEchhhcCCCCc-eEEEEE
Confidence            88999999999987    334444432     13789999999988752 454444

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.94  E-value=2e-09  Score=95.69  Aligned_cols=227  Identities=17%  Similarity=0.108  Sum_probs=53.6

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH-HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARR-AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL  139 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~-~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~  139 (319)
                      .+.++++.+++.+.........|.-..|-..-|. .+.+++...    ...+..+++++...|+.+++.++. +|.+|++
T Consensus        16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la-~~~EvIv   90 (367)
T PF03841_consen   16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLA-KGKEVIV   90 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccc-ccccccc
Confidence            3566788888877665543345543333222221 123333221    245678888998999999998886 5666776


Q ss_pred             cCCCC------cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc--cccccCHHHHHHHHHH
Q 020968          140 PRPGF------PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP--CGNVYTYQHLQKIAET  211 (319)
Q Consensus       140 ~~p~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np--tG~~~~~~~l~~i~~~  211 (319)
                      ..-.-      .....+.+..|.+++.+....    .-.++++++++++++.+++-.+++|-  .|..=. -.+++++++
T Consensus        91 sRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~l  165 (367)
T PF03841_consen   91 SRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEELAEL  165 (367)
T ss_dssp             ---------------------------------------------------------------------------HHHHH
T ss_pred             cccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc-ccHHHHHHH
Confidence            55322      224567788899998887642    24678899999999999999998775  343311 358999999


Q ss_pred             HHHcCCEEEEeCCCCCcc----CCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968          212 AKKLGIMVIADEVYDHLA----FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS  287 (319)
Q Consensus       212 ~~~~~~~li~D~a~~~~~----~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  287 (319)
                      +++|++++++|..-+.+.    ++-...+.+..+-..+-.++++|-.|.++.  -+.|.+++.        .++++++++
T Consensus       166 a~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG--PQaGiI~Gk--------k~lI~~lk~  235 (367)
T PF03841_consen  166 AKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG--PQAGIIVGK--------KELIEKLKK  235 (367)
T ss_dssp             HHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS---S-EEEEEE--------HHHHHHHHH
T ss_pred             HhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC--CCeEEEEeC--------HHHHHHHhh
Confidence            999999999999885443    111122345555444556999999999655  458999985        479999887


Q ss_pred             hhh-hcCCcchHHHHHHHHHH
Q 020968          288 FLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       288 ~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ..- ...-++++...++...+
T Consensus       236 ~pl~RalrvdK~tla~L~atL  256 (367)
T PF03841_consen  236 HPLGRALRVDKLTLAALEATL  256 (367)
T ss_dssp             HHHTTT-B--HHHHHHHHHHH
T ss_pred             CCCcceEeeCHHHHHHHHHHH
Confidence            543 24456777777766654

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.93  E-value=1.4e-07  Score=89.06  Aligned_cols=254  Identities=13%  Similarity=0.067  Sum_probs=143.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-...- ---.|.+.+++.+++......  .......+.+..+++.+.+...  ...+.+++++++++|
T Consensus        45 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~--~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA  119 (466)
T PRK07030         45 EGKRYLDAVSSWWVNVF-GHANPRINQRIKDQVDQLEHV--ILAGFSHEPVIELSERLVKITP--PGLSRCFYADNGSSA  119 (466)
T ss_pred             CCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHH
Confidence            46778888777322111 133578899999988763211  1111123445556666654221  134689999999999


Q ss_pred             HHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCC--CCcC--------
Q 020968          123 IEVILTVLA------R-P-GANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAK--GWEV--------  171 (319)
Q Consensus       123 i~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~~--------  171 (319)
                      +..+++...      . + ..+|+....+|++....+.. .+.            .+..++.....  .++.        
T Consensus       120 ve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~  199 (466)
T PRK07030        120 IEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRR  199 (466)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHH
Confidence            999988652      1 2 35788888888775433222 111            11112211000  0011        


Q ss_pred             CHHHHHhhhc---cCceEEEEcC-CCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          172 DLDAVEALAD---ENTVALVIIN-PGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       172 d~~~l~~~l~---~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                      +++.+++.+.   ++..+|++.- .....|. ..+..-++++.++|+++|+++|.||++.+|...|.-+ ....++-.+.
T Consensus       200 ~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~gv~PD  278 (466)
T PRK07030        200 MFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAGIRPD  278 (466)
T ss_pred             HHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch-HHHhcCCCCC
Confidence            2455666664   3445555554 2444565 5566779999999999999999999999876555321 1122222233


Q ss_pred             eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH--------hhhhcCCcchHHHHHHHHHH--hcccccc
Q 020968          247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS--------FLNISSDPATFIQFLKSSRK--LKRNSFL  314 (319)
Q Consensus       247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l--~~~~~~~  314 (319)
                      ++   .++|.+ ..| +.+|.+++.+        ++.+.+..        ....+.+.++++..+....+  ++++++.
T Consensus       279 iv---~~gKgl-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~  345 (466)
T PRK07030        279 FL---CLSKAL-TGGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVI  345 (466)
T ss_pred             EE---eeehhc-cCCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence            44   359995 468 5899999853        46665532        12223445666665555443  3444443

>PRK06148 hypothetical protein; Provisional

Probab=98.92  E-value=1.3e-07  Score=97.08  Aligned_cols=250  Identities=14%  Similarity=0.081  Sum_probs=139.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..++||..|....   --..|.+.+++.+++.....+ .|.     .+.+..+++.+.+...  -..+.++++++|++|
T Consensus       623 G~~ylD~~~g~~~l---GH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA  692 (1013)
T PRK06148        623 GRAYLDCFNNVCHV---GHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSEA  692 (1013)
T ss_pred             CCEEEEcccChhhc---CCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHH
Confidence            55577776663221   234688999999988753221 222     2344455555544322  123679999999999


Q ss_pred             HHHHHHHhcC--CCCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccC--CCCCcC-C-------HHHHH
Q 020968          123 IEVILTVLAR--PGANILLPRPGFPYYEARATH-SHL------------EVRHFDLLP--AKGWEV-D-------LDAVE  177 (319)
Q Consensus       123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~--~~~~~~-d-------~~~l~  177 (319)
                      +..+++....  ...+|+....+|++....+.. .+.            .+..++...  ...|.. +       .+.++
T Consensus       693 ~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~  772 (1013)
T PRK06148        693 NSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVA  772 (1013)
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHH
Confidence            9999886532  236788888888764322111 110            111111100  001111 1       13344


Q ss_pred             hhhc------cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          178 ALAD------ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       178 ~~l~------~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      +.+.      +++.+|++.......|. ..++.-++++.++|+++|+++|.||++.+|...|........++-.+.++  
T Consensus       773 ~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv--  850 (1013)
T PRK06148        773 EQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV--  850 (1013)
T ss_pred             HHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee--
Confidence            4442      23455555544433454 56777799999999999999999999998865553222222222222233  


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh--hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--LNISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                       +++|.+ ..|+.+|.+++..        ++.+.+...  ...+.+.++++..+....+  ++++++.+
T Consensus       851 -t~gK~l-ggG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~  909 (1013)
T PRK06148        851 -TMGKPI-GNGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQR  909 (1013)
T ss_pred             -eecccc-cCCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHH
Confidence             569995 5689999999853        465555421  1123345666655544433  44444443

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.88  E-value=1.2e-07  Score=84.56  Aligned_cols=254  Identities=15%  Similarity=0.102  Sum_probs=151.4

Q ss_pred             CCCCeEeccCCC-CCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           43 DTRPLIPLGHGD-PSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        43 ~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      .+.++||+..+- +.. .. ...|++.+++.+......  .+.|.   .++ . -.+++.+.+..+- -..+.|++++++
T Consensus        54 ~g~EyiD~~ssw~~~~-~G-hanpev~ral~~q~~k~~hs~~~~~---t~e-a-v~l~~~l~~~~~~-~~~~rvff~nsG  125 (433)
T KOG1401|consen   54 DGKEYIDFTSSWAVTI-LG-HANPEVARALAEQAKKLGHSSNGYF---TLE-A-VELEEVLSAVLGK-GSAERVFFCNSG  125 (433)
T ss_pred             Ccceeeeeccceeccc-cC-CCCHHHHHHHHHHHhhheeccCccc---cHH-H-HHHHHHHHhcccC-CCccEEEEecCC
Confidence            467789988773 222 22 347889999988776532  12222   122 1 1233333332221 267899999999


Q ss_pred             HHHHHHHHHHhcC---CC-----CEEEEcCCCCcch-HHHHhhCCCeEEEEeccCC-CCC----cCCHHHHHhhhccCc-
Q 020968          120 TQAIEVILTVLAR---PG-----ANILLPRPGFPYY-EARATHSHLEVRHFDLLPA-KGW----EVDLDAVEALADENT-  184 (319)
Q Consensus       120 t~ai~~~~~~l~~---~g-----d~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~-~~~----~~d~~~l~~~l~~~~-  184 (319)
                      |+|+..+++.-.+   .+     .+++....+|++- ...+...+...+..+.++- .++    --|...+++.++.+. 
T Consensus       126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~  205 (433)
T KOG1401|consen  126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG  205 (433)
T ss_pred             cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence            9999999876532   11     2488777777653 2222222222222222110 000    017899999987644 


Q ss_pred             --eEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968          185 --VALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       185 --~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G  261 (319)
                        .+|++.-..-..|. ..+++-+..+.+.|+++++++|.||++.+|...+.... ...+.-.+.   |.++.|.+ ..|
T Consensus       206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a-~e~~~~~PD---I~t~aK~L-~gG  280 (433)
T KOG1401|consen  206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWA-QEYFGVTPD---ITTVAKPL-GGG  280 (433)
T ss_pred             ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHH-HHHhCcCCc---ceeehhhc-cCC
Confidence              56666555555564 55667799999999999999999999998776553321 111111111   34678994 678


Q ss_pred             ceeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH--hccccccccc
Q 020968          262 WRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK--LKRNSFLKSL  317 (319)
Q Consensus       262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l--~~~~~~~~~l  317 (319)
                      +.+|..++.+        ++.+.+..-    +..+.+.++++..+....+  +++++|.+++
T Consensus       281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~v  334 (433)
T KOG1401|consen  281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNV  334 (433)
T ss_pred             ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHH
Confidence            9999998854        344444321    1223455677777666654  6778877765

>PLN02452 phosphoserine transaminase

Probab=98.84  E-value=2e-07  Score=85.21  Aligned_cols=197  Identities=11%  Similarity=0.077  Sum_probs=124.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      ...+++|+.|-      ...|+.+++++.+.+-...        ..+.++  -..++-+.+.+.+.+.++.+-+.+-+++
T Consensus         5 ~~~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l   76 (365)
T PLN02452          5 QGRVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFL   76 (365)
T ss_pred             CCceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            44578888886      4678999999987653211        112222  2234444444455554553323344566


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCC--cCCHHHHHhhhccCceEEEEcC
Q 020968          116 TLGCTQAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGW--EVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      ..|+|.++..++..++.+|+++++......+  +...++.+|...+.... +..++  .+++++++.  +++.+.+.+++
T Consensus        77 ~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~h  153 (365)
T PLN02452         77 QGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICA  153 (365)
T ss_pred             eCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECC
Confidence            7889999999999999999988877766644  56777888864443322 11221  356666532  34567888888


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ....||+.++  +++++.      ++++|+|.+....    ..+..+..++     +.+.|..|.+|.+|  +|.+++.
T Consensus       154 nETstGv~~~--~~~~i~------~~~lvVDa~Ss~g----~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr  213 (365)
T PLN02452        154 NETIHGVEFK--DYPDVG------NVPLVADMSSNFL----SKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIR  213 (365)
T ss_pred             CCCCCcEecC--cccccC------CCeEEEECCcccc----CcccCHHHcC-----EEEEecccccCCCC--eEEEEEc
Confidence            8889999643  244443      3899999988763    2333333322     34469999998888  6777664

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.83  E-value=9.8e-08  Score=84.53  Aligned_cols=203  Identities=15%  Similarity=0.153  Sum_probs=140.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .+.+++||+..+..   .+--.+.+.+.....++......      |+.-.-+-++.+.+|+++        ..++-++.
T Consensus        92 ~G~~~~N~aS~NfL---~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~--------G~E~aivY  160 (467)
T KOG1358|consen   92 DGKDVLNFASANFL---GLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM--------GTEDAIVY  160 (467)
T ss_pred             cCceeecccchhhh---hhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--------CCcceeee
Confidence            36678888888743   35566777777666665543222      444444678899999998        44566666


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc------------
Q 020968          117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT------------  184 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------------  184 (319)
                      +-+..++..++.++++.||.|.+..-.........+...-.+.++..+       |.++++..+.+.+            
T Consensus       161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~  233 (467)
T KOG1358|consen  161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALT  233 (467)
T ss_pred             ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccc
Confidence            777888999999999999999998888877777777777777766542       6666666543211            


Q ss_pred             eE-EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC--CCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968          185 VA-LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN--TPFVPMGVFGSIVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       185 ~~-v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~~~~~vi~~~s~sK~~~~~G  261 (319)
                      +. +++..-.-++|.+.+   +.+|+++..+|...+|+||.|+.-..+.  +....-......+-.++++|+.-+++..|
T Consensus       234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G  310 (467)
T KOG1358|consen  234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG  310 (467)
T ss_pred             eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence            33 344445668999955   8999999999999999999998755443  22211111222233588899998876666


Q ss_pred             ceeeEEEe
Q 020968          262 WRLGWLVT  269 (319)
Q Consensus       262 ~r~G~i~~  269 (319)
                         |+.++
T Consensus       311 ---gFc~G  315 (467)
T KOG1358|consen  311 ---GFCAG  315 (467)
T ss_pred             ---ceeec
Confidence               77776

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=98.83  E-value=5.7e-07  Score=85.00  Aligned_cols=220  Identities=17%  Similarity=0.169  Sum_probs=124.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEe-CCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLT-LGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~-~G~t~  121 (319)
                      +..++|+..|--.... =--.|.+.+++++++.....  +.......+.+..+++.+......... .+.++++ +++++
T Consensus        62 G~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE  138 (464)
T PRK06938         62 GRQFIDCLAGAGTLAL-GHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD  138 (464)
T ss_pred             CCEEEEccCCcccccc-CCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence            6667888766422111 13467899999998864221  111111224444455555442211111 1356665 68999


Q ss_pred             HHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCC--Cc--------CCHHHH
Q 020968          122 AIEVILTVLAR-P-GANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKG--WE--------VDLDAV  176 (319)
Q Consensus       122 ai~~~~~~l~~-~-gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~--------~d~~~l  176 (319)
                      |+..+++.... . ..+|+....+|++....+.. .+.            ++..++......  +.        .+.+.+
T Consensus       139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  218 (464)
T PRK06938        139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL  218 (464)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence            99999886432 2 36788888888775433222 110            122232211000  00        125667


Q ss_pred             Hhhhcc------CceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968          177 EALADE------NTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT  249 (319)
Q Consensus       177 ~~~l~~------~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~  249 (319)
                      ++.+.+      ++.+|++.-.....|.+ .+..-++++.++|+++|+++|.||++.+|...|.-+ ....++-.+.++ 
T Consensus       219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PDiv-  296 (464)
T PRK06938        219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPDVV-  296 (464)
T ss_pred             HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCCEE-
Confidence            777652      34555554434444664 567889999999999999999999999886555321 112222222344 


Q ss_pred             EecCccccCCCcceeeEEEeeC
Q 020968          250 LGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                        .++|.+ ..|+.+|.+++.+
T Consensus       297 --~~gKgl-ggG~PlsAv~~~~  315 (464)
T PRK06938        297 --VLSKAI-GGSLPLAVVVYRE  315 (464)
T ss_pred             --Eeeccc-cCCCceEEEeehh
Confidence              359996 4689999999853

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=98.80  E-value=2.8e-07  Score=86.43  Aligned_cols=208  Identities=13%  Similarity=0.149  Sum_probs=116.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+|||..|--.... ---.|.+.+++.+++....  .+..   ....+..+++.+.+...   ..+.+++++++++|
T Consensus        46 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~--~~~~---~~~~~~~la~~l~~~~p---~~~~v~f~~sGseA  116 (431)
T PRK06209         46 DGNEYIEYGMGLRAVGL-GHAYPPVVEAVREALQDGC--NFTR---PSAIELDAAESFLELID---GADMVKFCKNGSDA  116 (431)
T ss_pred             CCCEEEEccccccchhc-CCCCHHHHHHHHHHHHhCc--CCCC---CCHHHHHHHHHHHHhCC---ccceEEEecCHHHH
Confidence            46778888776422111 1345789999999887643  2321   12233334444443221   23689999999999


Q ss_pred             HHHHHHHhcC-CC-CEEEEc-CCCCcchHHHHh-----hCCCe--EEEEeccCCCCCcCCHHHHHhhhcc---CceEEEE
Q 020968          123 IEVILTVLAR-PG-ANILLP-RPGFPYYEARAT-----HSHLE--VRHFDLLPAKGWEVDLDAVEALADE---NTVALVI  189 (319)
Q Consensus       123 i~~~~~~l~~-~g-d~Vl~~-~p~~~~~~~~~~-----~~g~~--~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l  189 (319)
                      +..+++.... .| .+|+.. .-.|..+.....     ..+..  .......-.   .-|++.+++.++.   +..+|++
T Consensus       117 ~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~~aavi~  193 (431)
T PRK06209        117 TSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR---YNDIASLEALFEDHPGRIACVIL  193 (431)
T ss_pred             HHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC---CCCHHHHHHHHHhCCCCEEEEEE
Confidence            9999885431 33 345443 222322110000     00100  000000000   1278888887752   3344444


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                       -|-  .|...+...++++.++|+++|+++|+||++.++...+..  ....+.-.+.   +.+++|.++ .|+.+|.+++
T Consensus       194 -Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g--~~~~~gv~PD---i~t~gK~lg-gG~p~~av~~  264 (431)
T PRK06209        194 -EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRG--AQKLYGIVPD---LSCFGKALG-NGFAVSALAG  264 (431)
T ss_pred             -ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcch--hhHHhCCCcc---eeeehhhhc-CCcccEEEEE
Confidence             442  244667788999999999999999999998776432111  1111111112   256899975 5788999998


Q ss_pred             eC
Q 020968          270 SD  271 (319)
Q Consensus       270 ~~  271 (319)
                      ++
T Consensus       265 ~~  266 (431)
T PRK06209        265 KR  266 (431)
T ss_pred             HH
Confidence            53

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=98.78  E-value=1.4e-06  Score=82.22  Aligned_cols=220  Identities=17%  Similarity=0.111  Sum_probs=123.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~~G~t~  121 (319)
                      .+..++||..|--...- =--.|.+.+++++++........  .....+.+..+++.+.+..+.... ...+++++++++
T Consensus        56 dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE  132 (459)
T PRK06931         56 EGNQYLDCLAGAGTLAL-GHNHPDVLQSIQDVLTSGLPLHT--LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD  132 (459)
T ss_pred             CCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhhccccc--cccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence            36678888777422111 13457899999988765321111  111235555666666553321101 123466689999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-C------------CeEEEEeccCCCC--Cc----CCHHHH----
Q 020968          122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-H------------LEVRHFDLLPAKG--WE----VDLDAV----  176 (319)
Q Consensus       122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~~--~~----~d~~~l----  176 (319)
                      |+..+++...  ....+|+....+|++....+... +            ..+..++......  +.    -+.+.+    
T Consensus       133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (459)
T PRK06931        133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF  212 (459)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence            9999988643  23467888888887765443321 1            1122222211000  00    012222    


Q ss_pred             Hhhhc------cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968          177 EALAD------ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT  249 (319)
Q Consensus       177 ~~~l~------~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~  249 (319)
                      ++.+.      ++..+|++.-.....|. ..+..-++++.++|+++|+++|.||+..+|...|.. .....+.-.+.++ 
T Consensus       213 ~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv-  290 (459)
T PRK06931        213 ENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII-  290 (459)
T ss_pred             HHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE-
Confidence            22332      13455555544444465 456777999999999999999999999988655532 1222222222344 


Q ss_pred             EecCccccCCCcceeeEEEee
Q 020968          250 LGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~  270 (319)
                        +++|.+ ..|+.+|.+++.
T Consensus       291 --t~gK~l-~gG~Pi~av~~~  308 (459)
T PRK06931        291 --VMSKAV-GGGLPLAVLGIK  308 (459)
T ss_pred             --Eecccc-cCCcceeeeeeH
Confidence              469996 457999987764

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.77  E-value=6.7e-07  Score=90.66  Aligned_cols=185  Identities=19%  Similarity=0.245  Sum_probs=122.7

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      .++.|..+    .-.|+.+.+.+.+.  ...+..|.|..     |    +-++++.++++.      +++..++-+..++
T Consensus        80 ~ig~G~y~----~~~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt------G~~~anaSl~d~a  147 (954)
T PRK05367         80 YIGQGYYG----THTPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT------GLEIANASLLDEA  147 (954)
T ss_pred             ccCCCCCC----CcCcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH------CCChhhccccccH
Confidence            34556543    23445554555442  22244565532     2    345666677776      5688899999999


Q ss_pred             HHHHHHHHHHhc-CC--CCEEEEcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          120 TQAIEVILTVLA-RP--GANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       120 t~ai~~~~~~l~-~~--gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      |++.+.++.++. .+  +++|++++..|+.+...    ++..|++++.++...  +  .+        .++...+++.+|
T Consensus       148 TAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d--~~--------~~~~~~vlvq~p  215 (954)
T PRK05367        148 TAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A--LD--------HDDVFGVLLQYP  215 (954)
T ss_pred             HHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C--CC--------cccEEEEEEecC
Confidence            999998888763 34  48999999999886644    467899999888632  1  11        224444555555


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc-----cCCCcceeeEE
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR-----WIVPGWRLGWL  267 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~-----~~~~G~r~G~i  267 (319)
                       |-+|.+.   ++++|+++|+++|+++++|.....+..-    .+...+.-   .|+++|..|+     ||.||  .|++
T Consensus       216 -~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~Ga---Di~vgs~qkfg~P~g~GGP~--aGfl  282 (954)
T PRK05367        216 -GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGA---DIAVGSAQRFGVPMGFGGPH--AAYF  282 (954)
T ss_pred             -CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCC---CEEEeeCcccCCCCCCCCCC--EEEE
Confidence             6799995   5999999999999999999855332211    12233333   4999999998     66665  8888


Q ss_pred             Eee
Q 020968          268 VTS  270 (319)
Q Consensus       268 ~~~  270 (319)
                      .+.
T Consensus       283 avr  285 (954)
T PRK05367        283 AVR  285 (954)
T ss_pred             EEC
Confidence            774

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=98.77  E-value=2.4e-07  Score=85.22  Aligned_cols=236  Identities=22%  Similarity=0.232  Sum_probs=131.9

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcC--CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-------CCC
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVG--ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-------RPG  134 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-------~~g  134 (319)
                      .+++.+|++++++.-.+....-..+  ..+|-+.++++.    + .-+-+.|++++|+++|+..+++...       ++.
T Consensus        62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a----P-~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~  136 (449)
T COG0161          62 RPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA----P-EGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQ  136 (449)
T ss_pred             CHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhC----C-CCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCc
Confidence            3788899999887632211111122  234444444444    1 1236799999999999999987652       222


Q ss_pred             -CEEEEcCCCCcchHHHH-hhCC-------------CeEEEEeccCC--CC----Cc----CCHHHHHhhhcc---CceE
Q 020968          135 -ANILLPRPGFPYYEARA-THSH-------------LEVRHFDLLPA--KG----WE----VDLDAVEALADE---NTVA  186 (319)
Q Consensus       135 -d~Vl~~~p~~~~~~~~~-~~~g-------------~~~~~~~~~~~--~~----~~----~d~~~l~~~l~~---~~~~  186 (319)
                       .+++.-...|++--..+ ..-|             .....++....  .+    +.    -..++|++.+..   +..+
T Consensus       137 r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IA  216 (449)
T COG0161         137 RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIA  216 (449)
T ss_pred             ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEE
Confidence             34777777775421111 1111             11222222110  01    11    124556665543   4445


Q ss_pred             EEEcCC-CCc-ccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968          187 LVIINP-GNP-CGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       187 v~l~~p-~np-tG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      .++.-| ..- .|+ ++++.-++++.++|++||+++|.||+-.+|...|+.+.. ..+.-.+.++   +++|.+...=+.
T Consensus       217 AfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~~gi~PDi~---~~aKGLT~GY~P  292 (449)
T COG0161         217 AFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EHAGIVPDIL---CLAKGLTGGYLP  292 (449)
T ss_pred             EEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hhcCCCCCee---eecccccccchh
Confidence            555555 333 676 455666999999999999999999999998877754322 1122112234   568887666667


Q ss_pred             eeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          264 LGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       264 ~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                      +|.+++.+        ++.+.+..-      .+.+...++++..+..+.+  +++++|.++
T Consensus       293 l~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~  345 (449)
T COG0161         293 LSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLER  345 (449)
T ss_pred             hHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHH
Confidence            77776643        466665543      1223445566655443333  566666654

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.71  E-value=4.8e-07  Score=81.38  Aligned_cols=174  Identities=20%  Similarity=0.181  Sum_probs=121.9

Q ss_pred             CCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHH---HHHHhc-CC----CCEEEEcCCCCcchH
Q 020968           81 NCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEV---ILTVLA-RP----GANILLPRPGFPYYE  148 (319)
Q Consensus        81 ~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~---~~~~l~-~~----gd~Vl~~~p~~~~~~  148 (319)
                      +.|.|   ..|+.++...+.+|+.+.-    ..+.|-+.+. +.++=..   ++++.. ..    .+.+++++..|....
T Consensus        96 HP~~pe~~vqG~l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP  171 (496)
T COG1003          96 HPFQPEEQVQGYLELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP  171 (496)
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh
Confidence            34544   3567788888888888754    3566666533 2333222   233332 22    368999999999888


Q ss_pred             HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc
Q 020968          149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL  228 (319)
Q Consensus       149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~  228 (319)
                      ..+...|.+++.|+.+.++  .+|+++|++.+.++..++.+++||. .|..  .+.+.+|+++.+++|..+..|.|-..-
T Consensus       172 ASAam~G~~VV~V~~~~~G--~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA  246 (496)
T COG1003         172 ASAAMAGFKVVVVKCDENG--NVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNA  246 (496)
T ss_pred             hhHhhcCceEEEEecCCCC--CccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhh
Confidence            9999999999999987554  5999999999999999999999974 3544  267999999999999999999988764


Q ss_pred             cCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEEEe
Q 020968          229 AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVT  269 (319)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~  269 (319)
                      ..+-..+..   +   +-.|+=--++|+|+.|    |-.+|=|.+
T Consensus       247 ~vG~~rPGd---~---G~DV~HlNLHKTF~iPHGGGGPG~GPvgV  285 (496)
T COG1003         247 IVGLARPGD---M---GFDVVHLNLHKTFCIPHGGGGPGAGPVGV  285 (496)
T ss_pred             hhccccccc---c---ccceEEeecccccccCCCCCCCCCCceeh
Confidence            433222211   1   2225555788888765    555555543

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=98.62  E-value=1e-06  Score=80.61  Aligned_cols=177  Identities=16%  Similarity=0.036  Sum_probs=113.3

Q ss_pred             HHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCc
Q 020968           67 AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFP  145 (319)
Q Consensus        67 ~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~~~p~~~  145 (319)
                      .++++++.+-..  .++++  ...++-+.+.+.+.+.++.+-+.+-++++.|+|.++.+++..++ ++|++|++.. .|.
T Consensus        19 ~~~~~~~~~~~~--~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG   93 (374)
T TIGR01365        19 SIEELKNAPLGR--SHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG   93 (374)
T ss_pred             hHHHHhhhhccc--CcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence            666666543321  23433  33445444555555555532223335668889999999999998 5888998865 554


Q ss_pred             c-hH-HHHhhCCC-eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          146 Y-YE-ARATHSHL-EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       146 ~-~~-~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      . +. .+++.+|+ ++..+...  .+-.+++++++.  +   +.|++++.-..||+..+   ++++++.+  ++.++|+|
T Consensus        94 ~r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVD  161 (374)
T TIGR01365        94 KGWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICD  161 (374)
T ss_pred             HHHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCEEEecCCCchheecc---cccccccc--CCCcEEEE
Confidence            3 35 78888999 47777643  334678888873  1   23668888889999977   44444322  48999999


Q ss_pred             CCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          223 EVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       223 ~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      .+-+...    .+..+.     .-.+++.|.-|.+++|+ .+++++++
T Consensus       162 avSs~g~----~~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs  199 (374)
T TIGR01365       162 ATSAAFA----QDLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILS  199 (374)
T ss_pred             ccchhcC----CCCChh-----HCcEEEEechhccCCCC-ceEEEEEC
Confidence            9887632    222222     12388999999998864 25556554

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.62  E-value=3.8e-06  Score=83.93  Aligned_cols=233  Identities=16%  Similarity=0.103  Sum_probs=131.6

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----------
Q 020968           63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----------  132 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~----------  132 (319)
                      ..|++.+++.+++.+..+  +.......+-...+|+.+.+.-+ .-..+.++++++|++|+..+++...+          
T Consensus       383 ~~p~I~~Ai~~Qa~rl~h--v~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~  459 (817)
T PLN02974        383 LQPELARAVAYAAGRYGH--VMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLE  459 (817)
T ss_pred             CCHHHHHHHHHHHhhCCc--cccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCc
Confidence            479999999999876432  21111123445556666654211 00136899999999999998875421          


Q ss_pred             -----------CCCEEEEcCCCCcchHHHHh-hCCC---------e-----EEEEeccC------------CCC------
Q 020968          133 -----------PGANILLPRPGFPYYEARAT-HSHL---------E-----VRHFDLLP------------AKG------  168 (319)
Q Consensus       133 -----------~gd~Vl~~~p~~~~~~~~~~-~~g~---------~-----~~~~~~~~------------~~~------  168 (319)
                                 ...+|+....+|++--..+. ..+.         .     ...++...            ..+      
T Consensus       460 ~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~  539 (817)
T PLN02974        460 NSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLE  539 (817)
T ss_pred             ccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccc
Confidence                       12468888888876322222 2111         0     00010000            000      


Q ss_pred             -----Cc-----CC------------HHHHHhhhc--------cCceEEEEcCC-CCcccccc-CHHHHHHHHHHHHHcC
Q 020968          169 -----WE-----VD------------LDAVEALAD--------ENTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLG  216 (319)
Q Consensus       169 -----~~-----~d------------~~~l~~~l~--------~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~  216 (319)
                           |.     ++            .+.+++.+.        ++..++++.-. ..-.|+++ +..-++++.++|+++|
T Consensus       540 ~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~g  619 (817)
T PLN02974        540 GEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRK  619 (817)
T ss_pred             ccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence                 00     00            144555553        23345554442 45567654 6777999999999999


Q ss_pred             CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH-------h
Q 020968          217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-------F  288 (319)
Q Consensus       217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~  288 (319)
                      +++|.||++.+|...|..+. ...++-.+.++   .++|.+ ..| +.+|.+++.+        ++.+.+..       .
T Consensus       620 ilLI~DEV~TGfGRtG~~fa-~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~~--------~I~~~f~~~~~~~~~~  686 (817)
T PLN02974        620 IPVIFDEVFTGLWRLGVESA-WELLGCKPDIA---CYAKLL-TGGLVPLAATLATE--------EVFEAFRGPSKLDALL  686 (817)
T ss_pred             CEEEEeecccCCCcccchhh-HHhcCCCCCEE---eecccc-cCCCCccEEEEEcH--------HHHHhhccccccCCcc
Confidence            99999999999877664332 22222222334   479995 567 6999999854        46665531       1


Q ss_pred             hhhcCCcchHHHHHHHHHH--hccc
Q 020968          289 LNISSDPATFIQFLKSSRK--LKRN  311 (319)
Q Consensus       289 ~~~~~~~~~~~q~~~~~~l--~~~~  311 (319)
                      ...+.+.++++..+....+  ++++
T Consensus       687 hg~Ty~gnpl~cAaala~L~~~~~~  711 (817)
T PLN02974        687 HGHSYTAHPMGCAAAAKALQWYKDP  711 (817)
T ss_pred             cCCCCCcCHHHHHHHHHHHHHHHcc
Confidence            2223445566655544433  3444

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=98.60  E-value=2e-06  Score=74.83  Aligned_cols=204  Identities=15%  Similarity=0.172  Sum_probs=129.1

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc---CCCCCCC-CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS---ARFNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~---~~~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      +.++|.|+.+.-..    .++....+..+...+.   +...... .....-++-+.+.+.+....  +....+++++.+.
T Consensus        29 p~~viyLdgnSLGa----~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLi--GA~~~Evvv~dtt  102 (407)
T COG3844          29 PGGVIYLDGNSLGA----RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLI--GARAGEVVVTDTT  102 (407)
T ss_pred             CCCeEEeecccccc----CchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhh--cCCCCceEEeCCc
Confidence            67899999888542    2212222222222221   1100000 11222333333444443332  3468899999999


Q ss_pred             HHHHHHHHHHhc--CCCCEEEEcC-CCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          120 TQAIEVILTVLA--RPGANILLPR-PGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       120 t~ai~~~~~~l~--~~gd~Vl~~~-p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      +-.++.++.+..  .+|++|++++ -+|+.    ....+..++.. ..+      ...+.+.++++++.++...|++++.
T Consensus       103 s~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-~~~------~~~~~P~~~~~~~~dd~AvV~L~~V  175 (407)
T COG3844         103 SINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-YDL------EGVIAPRALEEAITDDVAVVLLSHV  175 (407)
T ss_pred             chHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-ccc------eeeeChHHHHHhhccceEEEEeccc
Confidence            999999888765  3588888776 33322    23444555543 111      1235777999999999999999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC-CcceeeEEEee
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTS  270 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~  270 (319)
                      +.-||+.++   +.+|-+++++++++++.|-+|+.    |.-+..+.....   .+-|++..|.++. ||-..|..+.+
T Consensus       176 ~y~TGql~d---m~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh~~ga---DfaigcsyKYLNgGPGapa~l~v~~  244 (407)
T COG3844         176 NYKTGQLLD---MRAITALAHQHGALVGWDLAHSA----GAVPVDLHAAGA---DFAIGCSYKYLNGGPGAPAGLFVAP  244 (407)
T ss_pred             cccccceee---HHHHHHHHHhcCceEEeehhccc----CCcceeecccCC---CeeeeeeceeccCCCCCceeEEecc
Confidence            999999966   89999999999999999999987    333344443333   4888999998766 67655555543

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.58  E-value=3.6e-06  Score=76.49  Aligned_cols=179  Identities=17%  Similarity=0.150  Sum_probs=129.7

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcE-EEeCCHHHHHHHHHHHhc----C-CC---CEEEEcCCCCcchHHHHhhCCCe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDV-YLTLGCTQAIEVILTVLA----R-PG---ANILLPRPGFPYYEARATHSHLE  157 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i-~~~~G~t~ai~~~~~~l~----~-~g---d~Vl~~~p~~~~~~~~~~~~g~~  157 (319)
                      ++..++..++-+++...++.+  .+.+ ..|.|+++++.++-....    + .|   ..++++...+..+.+.++..+++
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~--~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~  193 (491)
T KOG1383|consen  116 PVVRKLEAECVNMIANLFNAP--SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVE  193 (491)
T ss_pred             chhHHHHHHHHHHHHHHhcCC--ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEE
Confidence            466788888888877766655  3333 667888888555544331    1 23   46777788888999999999999


Q ss_pred             EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH-cCCEEEEeCCCCCccCC--CCC
Q 020968          158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFG--NTP  234 (319)
Q Consensus       158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~D~a~~~~~~~--~~~  234 (319)
                      +..++.++ +.|.+|+.++.+.++++++.++..-|+.|+|..   ++++++.++..+ +++.+.+|.+-+.|.-.  ...
T Consensus       194 l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~  269 (491)
T KOG1383|consen  194 LREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLN  269 (491)
T ss_pred             EEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccC
Confidence            99999875 779999999999999999999999999999999   899999999998 99999999999998752  111


Q ss_pred             CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCC
Q 020968          235 FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN  273 (319)
Q Consensus       235 ~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~  273 (319)
                      +..+ .+......=+--+-+|. |+.=-.+||++-.++.
T Consensus       270 ~~~f-dFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~  306 (491)
T KOG1383|consen  270 EEEF-DFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKE  306 (491)
T ss_pred             cccc-ccCCCCceeEeecccee-eeeecCcEEEEEcccc
Confidence            1111 12111111112234455 6654458898877654

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.56  E-value=3.5e-06  Score=85.35  Aligned_cols=181  Identities=19%  Similarity=0.172  Sum_probs=117.2

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCC-----cC----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSST-----VG----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA  131 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~  131 (319)
                      ...|+.+.+++.+...-  +..|.|.     .|    +.++++.+++++      +++.+++-++.++|.+.++++.++.
T Consensus       115 ~~~P~~v~~~i~~~~~~--~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~  186 (993)
T PLN02414        115 THVPPVILRNILENPGW--YTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNN  186 (993)
T ss_pred             ccCCHHHHHHHHhChHH--HhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHh
Confidence            35677777777665332  2244443     22    456777788887      5788999999999999999887763


Q ss_pred             -CC--CCEEEEcCCCCcchHHHH----hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          132 -RP--GANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       132 -~~--gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                       ++  +++|++++..|+.+...+    +..|++++.++....     +      ...+....++ .+-.|-+|.+.   +
T Consensus       187 ~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vl-vq~P~~~G~v~---d  251 (993)
T PLN02414        187 ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVL-VQYPATDGEVL---D  251 (993)
T ss_pred             cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEE-EecCCCCeEEc---C
Confidence             43  478999999998875544    456888888876321     1      1112333444 33334689995   5


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc---CCCcceeeEEEeeC
Q 020968          205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW---IVPGWRLGWLVTSD  271 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~---~~~G~r~G~i~~~~  271 (319)
                      +++|+++|+++|+++++ .+... ....-  .+...+.-   .|++++..|+.   |..|-+.|++.+.+
T Consensus       252 v~~I~~~ah~~GaL~iV-aad~l-al~~l--~~pge~GA---Di~vgsgqKwg~P~G~GGP~aGflavr~  314 (993)
T PLN02414        252 YAEFVKNAHANGVKVVM-ATDLL-ALTML--KPPGEWGA---DIVVGSAQRFGVPMGYGGPHAAFLATSQ  314 (993)
T ss_pred             HHHHHHHHHHcCCEEEE-EECHH-HhcCC--CCHhhccC---cEEEECCCccccCCCCCCCCeeEEEECH
Confidence            99999999999999999 33322 11111  12223333   48899999984   11355588988753

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=98.56  E-value=5.2e-06  Score=75.41  Aligned_cols=195  Identities=14%  Similarity=0.067  Sum_probs=119.5

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +.++|+.|-      -.+|+.+.+++++.+....        ..++++  -..++-+.+.+.+++.++.+-+.+=+++..
T Consensus         4 ~~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~G   75 (364)
T PRK12462          4 NQLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYGVVFLQG   75 (364)
T ss_pred             ccceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence            356888876      3678889888887654311        122322  223444444445555555433344446667


Q ss_pred             CHHHHHHHHHHHhcCCCCEEE--EcCCCCcc-hHHHHhhCCCeEEEEeccCCCC--CcCCHHHHHhhhccCceEEEEcCC
Q 020968          118 GCTQAIEVILTVLARPGANIL--LPRPGFPY-YEARATHSHLEVRHFDLLPAKG--WEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl--~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      |+|.++.++...++.+|++++  +..-.|.. +...++.+| ++..+......+  ..++++.++  ++++.+.|.+++-
T Consensus        76 ggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~d~~~v~~t~N  152 (364)
T PRK12462         76 GSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDARAPFRHYVSN  152 (364)
T ss_pred             cHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCCCCcEEEEccC
Confidence            799999999999999999665  44444432 456677777 544443211112  234555542  2345677778887


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ...||+.++        ++.+.++.++|+|.+-..+.    .+..+..+     .+++.|.-|.+|.||  ++.+++.
T Consensus       153 ETstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs  211 (364)
T PRK12462        153 ETVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIR  211 (364)
T ss_pred             CCCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEEC
Confidence            889999876        22223589999999887633    22333333     388889999999777  4555553

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=98.55  E-value=2.4e-06  Score=75.99  Aligned_cols=242  Identities=19%  Similarity=0.133  Sum_probs=144.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+..++|+-.|.....- -...|.+.+++.+++..-  .+..|... -..++.++++..+      +-+-+.++++++++
T Consensus        48 ~G~ryLD~f~Gi~tvsl-GHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~nsGs  119 (442)
T KOG1404|consen   48 EGRRYLDAFGGIVTVSL-GHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFVNSGS  119 (442)
T ss_pred             CCceeehhhCCeEEEEc-CCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEecCCc
Confidence            46666777666432211 134578888888887542  23355543 3467777777777      33556799999999


Q ss_pred             HHHHHHHHHhcC-CC-CEEEEcCCCCcchH-HHHhhCCCeEEEEecc-------------CCCC-CcCC-----H----H
Q 020968          121 QAIEVILTVLAR-PG-ANILLPRPGFPYYE-ARATHSHLEVRHFDLL-------------PAKG-WEVD-----L----D  174 (319)
Q Consensus       121 ~ai~~~~~~l~~-~g-d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~-------------~~~~-~~~d-----~----~  174 (319)
                      +|+.++++.... .| -.|+.-..+|.+.. ..+-..++.....+..             +..+ |+-+     .    +
T Consensus       120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~  199 (442)
T KOG1404|consen  120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK  199 (442)
T ss_pred             hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence            999999876531 22 35666666775533 2333333333322211             0000 1111     1    3


Q ss_pred             HHHhhhc---cCceEEEEc-CCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968          175 AVEALAD---ENTVALVII-NPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT  249 (319)
Q Consensus       175 ~l~~~l~---~~~~~v~l~-~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~  249 (319)
                      ++++.+.   +++.+.++. ...--.|+ .++.--+++..++|+++|.++|.||+..+|...|    .+..+...+-+=-
T Consensus       200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG----~~wgfe~h~v~PD  275 (442)
T KOG1404|consen  200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG----HMWGFESHGVVPD  275 (442)
T ss_pred             HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc----ccccccccCCCcc
Confidence            3333331   233444444 44555564 4566669999999999999999999999988766    3444444443334


Q ss_pred             EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh--hcCCcchHHHHHHHH
Q 020968          250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQFLKSS  305 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~  305 (319)
                      |-+++|. ...|+.+|.++..        +++.+.+.+..+  .+.+.++++..+...
T Consensus       276 IvTmAKg-iGnG~Pl~AVvtt--------~EIa~v~~~~~~~fnTyggnP~a~avg~a  324 (442)
T KOG1404|consen  276 IVTMAKG-IGNGFPLGAVVTT--------PEIADVLNQKSSHFNTYGGNPVACAVGLA  324 (442)
T ss_pred             HHHHHhh-ccCCCcceeeecC--------HHHHHHHHhccccccccCCCchhHHHHHH
Confidence            5689999 5778999999874        357777776552  234445555544333

>PRK08297 L-lysine aminotransferase; Provisional

Probab=98.53  E-value=1.5e-05  Score=75.06  Aligned_cols=187  Identities=16%  Similarity=0.137  Sum_probs=102.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHH--HHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVD--AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~--a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +..++|+..|--.... ---.|.+.+  ++++++..-............+....+++.+.+..+ .-..+.+++++++++
T Consensus        44 G~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGsE  121 (443)
T PRK08297         44 GRRYLDMFTFFASSAL-GMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGAL  121 (443)
T ss_pred             CCEeeecccCHhhhcC-CCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchHH
Confidence            5567777655321111 133567777  888777542110000000112233334444433221 113468999999999


Q ss_pred             HHHHHHHHhcC--------C------CCEEEEcCCCCcchHHHHhh-CCCeEE---EEec-------cCCCCC-----c-
Q 020968          122 AIEVILTVLAR--------P------GANILLPRPGFPYYEARATH-SHLEVR---HFDL-------LPAKGW-----E-  170 (319)
Q Consensus       122 ai~~~~~~l~~--------~------gd~Vl~~~p~~~~~~~~~~~-~g~~~~---~~~~-------~~~~~~-----~-  170 (319)
                      |+..+++....        .      ..+|+....+|++....+.. .+....   ..+.       .+.-.+     . 
T Consensus       122 Ave~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (443)
T PRK08297        122 AVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDL  201 (443)
T ss_pred             HHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccccc
Confidence            99999886521        1      25799888888775433332 221100   0000       000000     0 


Q ss_pred             --C------CHHHHHhhhc---cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC
Q 020968          171 --V------DLDAVEALAD---ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN  232 (319)
Q Consensus       171 --~------d~~~l~~~l~---~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~  232 (319)
                        .      +++.+++.+.   +++.++++.-.....|. +.+...++++.++|+++|+++|.||++.+|...|
T Consensus       202 ~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG  275 (443)
T PRK08297        202 EEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTG  275 (443)
T ss_pred             chhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccc
Confidence              0      2344555554   34455555544444464 5778889999999999999999999999875554

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=98.53  E-value=1.2e-05  Score=75.48  Aligned_cols=187  Identities=17%  Similarity=0.143  Sum_probs=103.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHH--HHHHHHhhcCCCCCCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAV--DAIVHSVRSARFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~--~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      ++..++||..|--...-. --.|.+.  +++.+++.......... ....+.+ ..+++.+.+..+ .-..+.+++++++
T Consensus        36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~-~~~~~~v~f~~sG  112 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAM-ARFVDTFARVLG-DPALPHLFFIEGG  112 (431)
T ss_pred             CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHH-HHHHHHHHHhcC-CCCcCEEEEeCCc
Confidence            356677776653221111 2346676  78877766432111111 1122333 333333332211 1134689999999


Q ss_pred             HHHHHHHHHHhcC--------C------CCEEEEcCCCCcchHHHHh-hCCCe-EE--EEec-------cC-------CC
Q 020968          120 TQAIEVILTVLAR--------P------GANILLPRPGFPYYEARAT-HSHLE-VR--HFDL-------LP-------AK  167 (319)
Q Consensus       120 t~ai~~~~~~l~~--------~------gd~Vl~~~p~~~~~~~~~~-~~g~~-~~--~~~~-------~~-------~~  167 (319)
                      ++|+..+++....        .      +.+|+....+|++....+. ..|.. ..  ..+.       .+       ..
T Consensus       113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  192 (431)
T TIGR03251       113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP  192 (431)
T ss_pred             HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence            9999999886531        1      3679988888877533222 22211 00  0010       00       00


Q ss_pred             CCc-------CCHHHHHhhhc---cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC
Q 020968          168 GWE-------VDLDAVEALAD---ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN  232 (319)
Q Consensus       168 ~~~-------~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~  232 (319)
                      ...       -+++.+++.+.   +++.++++.-.....|.+ .+++.+++|.++|+++|+++|+||++.++...|
T Consensus       193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG  268 (431)
T TIGR03251       193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTG  268 (431)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence            000       12344444553   355666666555556754 677889999999999999999999999876554

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=98.41  E-value=1e-05  Score=76.17  Aligned_cols=210  Identities=15%  Similarity=0.114  Sum_probs=114.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHH-hhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHS-VRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~-~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +..++|+..|-....- =.-.|.+.++++++ .....  ...|.. ....++.+.+++.+.+...  -+.+.++++++++
T Consensus        57 G~~ylD~~sg~~~~~l-Gh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~p--~~~~~v~f~~SGs  132 (464)
T TIGR00699        57 GNRLLDLYSQISSIPI-GYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVAP--KGQDQVWTGMSGS  132 (464)
T ss_pred             CCEEEEccCCHhhhcC-CCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhCC--CCcCEEEEeCCcH
Confidence            5667888777422111 14568888988874 22211  111221 1122344444332222221  1346899999999


Q ss_pred             HHHHHHHHHhcC--------------------------CC---CEEEEcCCCCcchHHHHh-hCCCe-----------EE
Q 020968          121 QAIEVILTVLAR--------------------------PG---ANILLPRPGFPYYEARAT-HSHLE-----------VR  159 (319)
Q Consensus       121 ~ai~~~~~~l~~--------------------------~g---d~Vl~~~p~~~~~~~~~~-~~g~~-----------~~  159 (319)
                      +|+..+++....                          +|   .+|+....+|++....+. ..+..           ..
T Consensus       133 EAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~  212 (464)
T TIGR00699       133 DANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWP  212 (464)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCce
Confidence            999999886521                          11   269988888877533322 22211           11


Q ss_pred             EEeccCCC-CC-----------cCCHHHHHhhhcc---CceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeC
Q 020968          160 HFDLLPAK-GW-----------EVDLDAVEALADE---NTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADE  223 (319)
Q Consensus       160 ~~~~~~~~-~~-----------~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~  223 (319)
                      .++..... .+           .-+++.+++.+..   +..+|++.......|.+. +.+-++++.++|+++|+++|+||
T Consensus       213 ~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE  292 (464)
T TIGR00699       213 QAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE  292 (464)
T ss_pred             ecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence            11111000 00           0134556666642   455666555555567765 67779999999999999999999


Q ss_pred             CCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCc
Q 020968          224 VYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       224 a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G  261 (319)
                      ++.++...|..+ ....++-  ... |  -+++|.++..|
T Consensus       293 V~tGfGrtG~~f-a~e~~gv~~~PD-i--~t~gK~lg~gG  328 (464)
T TIGR00699       293 VQTGVGATGKFW-AHEHWNLDDPPD-M--VTFSKKFQTAG  328 (464)
T ss_pred             eeeCCCCCcchh-HHHhcCCCCCCC-E--EEehhhhccCC
Confidence            998875544321 1111211  122 3  35799964444

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.27  E-value=2e-05  Score=68.75  Aligned_cols=213  Identities=18%  Similarity=0.179  Sum_probs=124.0

Q ss_pred             CCcHHHHHHHHHHhhcCCCC---CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc------C
Q 020968           62 RTASVAVDAIVHSVRSARFN---CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA------R  132 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~------~  132 (319)
                      ...|.++++++++.+.-...   -|..  -..++.+.+++++        ..+.++-++.+.+|...++....      +
T Consensus        75 hchpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K  144 (427)
T KOG1402|consen   75 HCHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGAEAVETACKLARKWGYRKK  144 (427)
T ss_pred             CCCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------CcceeeecccchhHHHHHHHHHHHHHHhhc
Confidence            45688899998887642221   1221  2334555555554        56778888888999888876553      1


Q ss_pred             --C-C-CEEEEcCCCCcchHHHH----------hhCCC----eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC-C
Q 020968          133 --P-G-ANILLPRPGFPYYEARA----------THSHL----EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-G  193 (319)
Q Consensus       133 --~-g-d~Vl~~~p~~~~~~~~~----------~~~g~----~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p-~  193 (319)
                        | . .+|+.....|.+--..+          +..|-    .+..++.       -|.++++.++++...+.++.-| +
T Consensus       145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~~~vaaFivEPIQ  217 (427)
T KOG1402|consen  145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKSPNVAAFIVEPIQ  217 (427)
T ss_pred             cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHhcCCCeeEEEeeccc
Confidence              2 2 24444444443211001          11110    0111111       1789999999876555556656 7


Q ss_pred             CccccccCH-HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          194 NPCGNVYTY-QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       194 nptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      -..|++.|. .-+++..++|.+||+++|.||++.++..+|+-..  ..+..-.+.+++  +.|.++..=..++.+++.+ 
T Consensus       218 GEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la--~d~env~PDivi--lgKalSGG~~Pvsavl~~~-  292 (427)
T KOG1402|consen  218 GEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLA--CDYENVRPDIVI--LGKALSGGVYPVSAVLADD-  292 (427)
T ss_pred             cccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEE--eehhhcCCCeEE--EeccccCCeeeeEEEEecH-
Confidence            788876654 4599999999999999999999999887764211  011111112333  6788776667788888743 


Q ss_pred             CCCccchHHHHHHHHhh-hhcCCcchHHHHHH
Q 020968          273 NGILQDSGIVDSIKSFL-NISSDPATFIQFLK  303 (319)
Q Consensus       273 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~  303 (319)
                             +++..++.-. ..+.+.+++...+.
T Consensus       293 -------~im~~~~pgeHgsTyggNpLg~~va  317 (427)
T KOG1402|consen  293 -------DIMLNIKPGEHGSTYGGNPLGCAVA  317 (427)
T ss_pred             -------HHHhccCCCccccccCCChHHHHHH
Confidence                   3555444332 22344556655443

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.24  E-value=4e-05  Score=70.72  Aligned_cols=189  Identities=22%  Similarity=0.344  Sum_probs=97.5

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC-----cCC----HHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-----VGI----LPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      --++.|..+    ...|+.+.+.+...  ...+..|.|.     .|.    -++...++++.      .++-.+.=+-.|
T Consensus        68 ~fiG~G~y~----~~~P~~i~~~i~~~--~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLT------GmdvaNaSlyd~  135 (429)
T PF02347_consen   68 SFIGAGSYT----HYVPAVIDRNILSR--PEFYTAYTPYQPEISQGRLQALFEYQSMICELT------GMDVANASLYDG  135 (429)
T ss_dssp             S---CTTT---------HHHHH-HHCC--HHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHH------TSSEE-SEBSSC
T ss_pred             ccccccccC----ceeChhhcCccccC--hhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhh------CCCccCCCCCCh
Confidence            345666655    34555555423322  1123355552     232    34455555555      233334455667


Q ss_pred             HHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          119 CTQAIEVILTVL---ARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       119 ~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      ++.+-.+++.+.   .+++++|+++...|+.+..++    ...|++++.++.+...  ..|        ++++.+|++.+
T Consensus       136 atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~--~~d--------~~~~a~v~vq~  205 (429)
T PF02347_consen  136 ATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG--TTD--------DDDTAAVMVQN  205 (429)
T ss_dssp             CHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC--SB---------STTEEEEEEES
T ss_pred             hHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC--Ccc--------ccCeEEEEeec
Confidence            776666665554   234569999999998887744    4578888888875432  233        56788999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEE
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWL  267 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i  267 (319)
                      ||+ .|.+   +++++|.++++++|.++++ .+- .+....-  .+...+.   -.|++++ +|.||.|    |-..|++
T Consensus       206 Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad-~~aL~~l--~~Pge~G---ADI~vg~-~Q~fg~p~~~GGP~~G~~  273 (429)
T PF02347_consen  206 PNT-FGVF---EDIKEIADIAHAAGALVIV-GAD-PNALGGL--KSPGEYG---ADIVVGE-HQTFGIPMGFGGPGAGFF  273 (429)
T ss_dssp             S-T-TSB-----THHHHHHHHHHTT-EEEE-CGG-CCGCCTC----GGGGT----SEEEEC-CTTTT---CCC-S--EEE
T ss_pred             CCC-CceE---eeHHHHHHHHHHcCCEEEE-ecC-HHHHhCc--CChhhcC---ccEEeeC-CCCCcccCCCCCCCeeeE
Confidence            985 6888   6699999999999999886 322 2222221  1122232   2377776 8887775    6667887


Q ss_pred             Eee
Q 020968          268 VTS  270 (319)
Q Consensus       268 ~~~  270 (319)
                      .+.
T Consensus       274 a~~  276 (429)
T PF02347_consen  274 AVR  276 (429)
T ss_dssp             EE-
T ss_pred             EEh
Confidence            763

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.20  E-value=2.5e-05  Score=68.93  Aligned_cols=137  Identities=18%  Similarity=0.186  Sum_probs=103.1

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC-----CCEEEEcCCCC-cchHHHHhhCC
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP-----GANILLPRPGF-PYYEARATHSH  155 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~-----gd~Vl~~~p~~-~~~~~~~~~~g  155 (319)
                      .|+.+.++-.|+.++.+.+        .-+.++.|.-+..|-+.....++++     |.+.++++..| .......+..|
T Consensus        74 AYagsrs~~~L~~avkdif--------Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng  145 (471)
T COG3033          74 AYAGSRSYYALADAVKDIF--------GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING  145 (471)
T ss_pred             hhcccccHHHHHHHHHHhc--------CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence            5888888899999999988        3467888888888887777777654     55555565555 44566677788


Q ss_pred             CeEEEEeccCCCC--------CcCCHHHHHhhhcc----CceEEEEcCCC-CccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          156 LEVRHFDLLPAKG--------WEVDLDAVEALADE----NTVALVIINPG-NPCGNVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       156 ~~~~~~~~~~~~~--------~~~d~~~l~~~l~~----~~~~v~l~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      ..+.-++++...+        ..+|++.|++++++    +...|+++..+ .-.|+..|.+.++++.++|++|++.++.|
T Consensus       146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D  225 (471)
T COG3033         146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD  225 (471)
T ss_pred             CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence            8777766553222        35799999998864    45566666554 46789999999999999999999999999


Q ss_pred             CCCC
Q 020968          223 EVYD  226 (319)
Q Consensus       223 ~a~~  226 (319)
                      .+-.
T Consensus       226 a~Rf  229 (471)
T COG3033         226 AARF  229 (471)
T ss_pred             hhhh
Confidence            8744

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.20  E-value=6.5e-05  Score=67.72  Aligned_cols=197  Identities=11%  Similarity=0.051  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-------CCC---
Q 020968           65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-------RPG---  134 (319)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-------~~g---  134 (319)
                      .-..+.+........+ -|.-.+...-..+.+-....+..|+....+.|+--.|+...++...-+--       ..|   
T Consensus       116 ~Lag~wlT~t~Ntn~~-TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~  194 (510)
T KOG0629|consen  116 GLAGEWLTSTANTNMF-TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFA  194 (510)
T ss_pred             HHHHHHHHhccCCCCc-eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhc
Confidence            3444445544444333 46655555445555555555556666666777766666666665543321       112   


Q ss_pred             --CEEEE-cCCCCcchHHHHhhCCCe---EEEEeccCCCCCcCCHHHHHhhhcc---C---ceEEEEcCCCCccccccCH
Q 020968          135 --ANILL-PRPGFPYYEARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADE---N---TVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       135 --d~Vl~-~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~---~---~~~v~l~~p~nptG~~~~~  202 (319)
                        +-|+. .+-+|.+..+.+..+|+.   ++.|+.+  ....+++++||+.+.+   +   +-.|..+......|..   
T Consensus       195 ~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---  269 (510)
T KOG0629|consen  195 LPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---  269 (510)
T ss_pred             CCcEEEEecccchhhHHHHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---
Confidence              34443 446677788999999964   5555554  4457999999997642   2   2333344446778888   


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      +++..|+++|++|++|+.+|.||++ +........-+......+  -+.-+.+|.. ...+.++..+..
T Consensus       270 DdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~~-gaplqCsa~l~r  335 (510)
T KOG0629|consen  270 DDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKLM-GAPLQCSAFLTR  335 (510)
T ss_pred             CcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHhh-cCcchhhHHHHH
Confidence            7899999999999999999999998 322221111222222211  2334678884 555666665543

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.14  E-value=0.00022  Score=71.95  Aligned_cols=147  Identities=13%  Similarity=0.190  Sum_probs=98.2

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      -++.|..+    ...|+.+.+.+.+.  ...+..|.|..     |    +-++.+.++++.      +++..+.-+..++
T Consensus        68 fig~G~y~----~~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~a  135 (939)
T TIGR00461        68 YIGMGYYG----TILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEG  135 (939)
T ss_pred             cCCCCcCC----CcCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchh
Confidence            44566543    35667777566542  22234565532     2    224455555555      4566677888888


Q ss_pred             HHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHh----hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          120 TQAIEVILTVLA---RPGANILLPRPGFPYYEARAT----HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       120 t~ai~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      |++.++++++..   +++++|++++..|+.+..+++    ..|++++.++          +++++..+  ++..+++.+|
T Consensus       136 tA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~~~~v~~q~P  203 (939)
T TIGR00461       136 TAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--DVFGCLLQYP  203 (939)
T ss_pred             hHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--CEEEEEEECC
Confidence            888887777642   234899999999988765544    7788777653          34565554  4567777787


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADE  223 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~  223 (319)
                      + -.|.+   +++++|+++++++|.+++++.
T Consensus       204 n-~~G~i---ed~~~i~~~~h~~gal~~~~a  230 (939)
T TIGR00461       204 A-TDGSI---LDYKQLIDALHSHKSLVSVAA  230 (939)
T ss_pred             C-CCeEE---ecHHHHHHHHHHcCCEEEEEe
Confidence            6 47888   579999999999999999855

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=97.93  E-value=0.00087  Score=61.26  Aligned_cols=140  Identities=13%  Similarity=0.169  Sum_probs=95.1

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCC-------CCCcEEEeCCHHHHHHHHHHHh-------cCCC-----------C-EEE
Q 020968           85 STVGILPARRAIADYLNRDLPYKL-------SPDDVYLTLGCTQAIEVILTVL-------ARPG-----------A-NIL  138 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~-------~~~~i~~~~G~t~ai~~~~~~l-------~~~g-----------d-~Vl  138 (319)
                      ..+...||+.-+.+|+.+..+.+-       ..--=++-..++++...++.+-       .+.+           + .+.
T Consensus       107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y  186 (511)
T KOG0628|consen  107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY  186 (511)
T ss_pred             cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence            345678999999999987554321       1112234444455554444332       1122           1 455


Q ss_pred             EcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccC-----ceEEEEcCC--CCccccccCHHHHHHHHHH
Q 020968          139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN-----TVALVIINP--GNPCGNVYTYQHLQKIAET  211 (319)
Q Consensus       139 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~l~~p--~nptG~~~~~~~l~~i~~~  211 (319)
                      +.+-.+.+..+.+...|+++..++.+.  +|+++.+.|++++.++     +..+++.+-  .+.++.    +++.++..+
T Consensus       187 ~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~----D~l~elg~V  260 (511)
T KOG0628|consen  187 CSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAF----DELEELGPV  260 (511)
T ss_pred             ecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCcccccc----ccHHHhcch
Confidence            678889999999999999998888754  8999999999998652     233333333  223322    689999999


Q ss_pred             HHHcCCEEEEeCCCCCccC
Q 020968          212 AKKLGIMVIADEVYDHLAF  230 (319)
Q Consensus       212 ~~~~~~~li~D~a~~~~~~  230 (319)
                      |+++++|+.+|.+|++-.+
T Consensus       261 c~~~glWLHVDAAYAGsa~  279 (511)
T KOG0628|consen  261 CREEGLWLHVDAAYAGSAF  279 (511)
T ss_pred             hhhcCEEEEeehhhccccc
Confidence            9999999999999996543

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=97.85  E-value=0.00014  Score=65.69  Aligned_cols=183  Identities=14%  Similarity=0.106  Sum_probs=105.8

Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCCHHH-HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968           92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQ-AIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG  168 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~-ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  168 (319)
                      |...++.-+-+..|.. +-...++++.+|. .+.+++.++.  ..++.|+.+.-.+......+...|++++.++.....+
T Consensus        57 ltn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d  135 (389)
T PF05889_consen   57 LTNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGD  135 (389)
T ss_dssp             HHHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETT
T ss_pred             HHHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCC
Confidence            3443333333445543 2356777776653 3455555554  5678999998888777788899999999998643333


Q ss_pred             -CcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968          169 -WEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI  244 (319)
Q Consensus       169 -~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~  244 (319)
                       ...|.+.+++.++   +...+.++++++--.+...  +++++|+++|+++|++.++..||+--...  -...+..-...
T Consensus       136 ~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~  211 (389)
T PF05889_consen  136 ELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRV  211 (389)
T ss_dssp             EEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHH
T ss_pred             eeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhc
Confidence             3447778887764   3556777887754445541  45999999999999999999999861100  00000000000


Q ss_pred             CC-eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968          245 VP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS  287 (319)
Q Consensus       245 ~~-vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  287 (319)
                      ++ .+++.|+-|.|..| ..-+.+.+++       +..+..+..
T Consensus       212 GRvda~vqS~dkNF~VP-vGgai~As~~-------~~~i~~vs~  247 (389)
T PF05889_consen  212 GRVDAFVQSTDKNFMVP-VGGAIMASFD-------PSGILAVSK  247 (389)
T ss_dssp             STCSEEEEEHHHHHCEE-SSHEEEEESS-------HHHHHHHHH
T ss_pred             CCcceeeeecCCCEEec-CCCcEEEecC-------HHHHHHHHH
Confidence            11 28899999999665 2234455544       346665554

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=97.60  E-value=0.0078  Score=54.83  Aligned_cols=189  Identities=21%  Similarity=0.297  Sum_probs=113.5

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      -++.|..+    .-.|+.+.+.+.+.  ...+..|.|..     |    +-++...++++.      .++-.+.=+-.++
T Consensus        79 fiG~GyY~----~~~P~vI~rnile~--pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT------Gm~VANASm~Dea  146 (450)
T COG0403          79 FIGAGYYD----TYTPPVILRNILEN--PEWYTAYTPYQPEISQGRLEALFEFQTLVADLT------GLDVANASMLDEA  146 (450)
T ss_pred             hccCcccC----CcCcHHHHHHhhcC--ccccccCCCCchhhhhHHHHHHHHHHHHHHHHh------CCCcccchhhhhH
Confidence            45666654    34566666455432  23344666532     1    123333444444      3344455556677


Q ss_pred             HHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHh----hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          120 TQAIEVILTVLA---RPGANILLPRPGFPYYEARAT----HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       120 t~ai~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      |.+-++++.+..   ++..+++++..+|+.+..+.+    -.|.+++..+.+       |.+.++..-...+..+++..|
T Consensus       147 TAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP  219 (450)
T COG0403         147 TAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYP  219 (450)
T ss_pred             HHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEEEecC
Confidence            777776666542   346899999999998877765    344555555542       677777772236688888888


Q ss_pred             CCccc-cccCHHHHHHHHHHHHHcCCEEEEeC--CCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceee
Q 020968          193 GNPCG-NVYTYQHLQKIAETAKKLGIMVIADE--VYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLG  265 (319)
Q Consensus       193 ~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~--a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G  265 (319)
                      + -.| ..   .+++++.+.+++++.++++=.  .--.+         +......+-.|++++.... |+|    |-.+|
T Consensus       220 ~-~~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~L---------L~pPGe~GADIvvG~~Qrf-GvPmgfGGPhag  285 (450)
T COG0403         220 N-TFGIVE---EDLRALIEAAHSAGALVIVAADPLALGL---------LKPPGEFGADIVVGSAQRF-GVPMGFGGPHAG  285 (450)
T ss_pred             C-CCCccc---hhHHHHHHHHhhcCCEEEEEechhHhhc---------cCCccccCCceEEecCccc-CCCcCCCCccee
Confidence            8 456 44   679999999999998777532  11111         1111222334888876665 554    67788


Q ss_pred             EEEee
Q 020968          266 WLVTS  270 (319)
Q Consensus       266 ~i~~~  270 (319)
                      |+.+.
T Consensus       286 ~fA~~  290 (450)
T COG0403         286 YFAVK  290 (450)
T ss_pred             eeeEh
Confidence            88764

>PLN02672 methionine S-methyltransferase

Probab=97.58  E-value=0.0038  Score=64.23  Aligned_cols=256  Identities=12%  Similarity=0.105  Sum_probs=154.7

Q ss_pred             cccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhC
Q 020968           25 GITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL  104 (319)
Q Consensus        25 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~  104 (319)
                      |.+++.|++.+..-.  +.-.+-++|+..|-..-  ..-. .....+...+.+..+..|.++.|...+|..||.|+...+
T Consensus       369 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (1082)
T PLN02672        369 PNQVKTIFKFLKNGF--HEVSGSLDLSFEDESVA--DEKI-PFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYH  443 (1082)
T ss_pred             chHHHHHHHHHHccc--hhhhhhccccccccccc--hhhc-cHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhc
Confidence            345666665443111  12234566765542210  0111 134556666777777899999999999999999999999


Q ss_pred             CCCCCCCcEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCCcchHHHHhhCC--------CeEEEEeccCCCCCc
Q 020968          105 PYKLSPDDVYLTLGCTQAIEVILTVLA------RPGANILLPRPGFPYYEARATHSH--------LEVRHFDLLPAKGWE  170 (319)
Q Consensus       105 g~~~~~~~i~~~~G~t~ai~~~~~~l~------~~gd~Vl~~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~  170 (319)
                      ++++.+++|++.++-..|+..+++.+.      +.+.+-..    ...|...+...|        -.+..+....     
T Consensus       444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  514 (1082)
T PLN02672        444 HIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWL----PKKWLTSLAIENATSDSKSDDVITVIEAPR-----  514 (1082)
T ss_pred             CCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccC----CHHHHhHhhhhcccccCccCCeEEEEeCCC-----
Confidence            999999999999999999988887653      33321111    112222222222        2222222211     


Q ss_pred             CCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccC---CCC
Q 020968          171 VDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFG---SIV  245 (319)
Q Consensus       171 ~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~---~~~  245 (319)
                       ..+.+.++++. +++.|+..--.   +-..+-..++.+.+.+++.|.+++.|..-. +++........+..+.   ...
T Consensus       515 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  590 (1082)
T PLN02672        515 -QSDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPS  590 (1082)
T ss_pred             -cchHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCc
Confidence             11234444443 45555544333   222333668999999999999999998643 4432221111121111   123


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                      +..++-++-|.--.+.+.+.+++..++       .+.+.+.+.... ....+.++|....-
T Consensus       591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (1082)
T PLN02672        591 HAAIICGLVKNQVYSDLEVAFVISENE-------AVLKALSKTGEVLEGRTAIISQFYYGC  644 (1082)
T ss_pred             chhHhhhhhhccccccceEEEEecCcH-------HHHHHHHHHHHhhccchHHHHHHHHHH
Confidence            457777899997789999999997553       477777777764 55678888877554

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=97.49  E-value=0.0018  Score=57.62  Aligned_cols=193  Identities=15%  Similarity=0.138  Sum_probs=108.3

Q ss_pred             CCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCC--cE-EEeCCHHHHHHHHHHHhcC
Q 020968           62 RTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPD--DV-YLTLGCTQAIEVILTVLAR  132 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~--~i-~~~~G~t~ai~~~~~~l~~  132 (319)
                      ....++.+|+-..+.....-+      |+..+.+++++..-.++--+.++  ++++  .| +=.-+++.|+.++..++++
T Consensus        51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~--ldp~kWGVNVQp~SGSPANfavYtall~  128 (477)
T KOG2467|consen   51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG--LDPEKWGVNVQPYSGSPANFAVYTALLK  128 (477)
T ss_pred             chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC--CCHHHCceeeccCCCCchhhHHHhhhcC
Confidence            455677777766665432222      33333334444333333222232  3443  11 1123557788889999999


Q ss_pred             CCCEEEE---cCCCCcchHHHHh--hCCCeEE-----EEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccC
Q 020968          133 PGANILL---PRPGFPYYEARAT--HSHLEVR-----HFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       133 ~gd~Vl~---~~p~~~~~~~~~~--~~g~~~~-----~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~  201 (319)
                      |+++|.-   |+-.|-.+.....  ...+.-+     ++.+++. ..-+|.+.||+.... ++++++-.....+  ..+ 
T Consensus       129 Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~frPk~iiaG~SaY~--R~~-  204 (477)
T KOG2467|consen  129 PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLEKTATLFRPKLIIAGTSAYS--RLI-  204 (477)
T ss_pred             CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCC-CCceehHHHHHHHHhcCCcEEEeccccch--hhc-
Confidence            9999974   3444433222221  1111111     2333333 347899999986543 5566553332222  232 


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                        +..++.++|.+.|++++.|.++.. ++-.+..+.|+ .+.+    |+..+.+|+  +.|-|-|-|..
T Consensus       205 --DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPF-ey~D----iVTTTTHKs--LRGPRg~mIFy  264 (477)
T KOG2467|consen  205 --DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPF-EYCD----IVTTTTHKS--LRGPRGAMIFY  264 (477)
T ss_pred             --cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcc-cccc----eeecccccc--ccCCcceeEEE
Confidence              367777788888999999999874 44444433333 2222    888899999  67888887755

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.08  E-value=0.038  Score=56.07  Aligned_cols=144  Identities=16%  Similarity=0.212  Sum_probs=85.4

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .-++.|..+    .-.|+.+.+.+.+.  ...+..|.|..     |    +-++...++++.      .++-.+.=+-.+
T Consensus        82 ~fiG~G~y~----~~~P~vi~~~i~~~--~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt------Gm~vaNASl~D~  149 (954)
T PRK12566         82 SLIGMGYHG----TVTPTVILRNVLEN--PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT------GLDLANASLLDE  149 (954)
T ss_pred             ccccccccC----CcCcHHHHHHHHhC--chhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh------Cchhhhhhhccc
Confidence            456666644    34555564555432  22244565532     2    223444444444      233334444556


Q ss_pred             HHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHh----hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          119 CTQAIEVILTVL---ARPGANILLPRPGFPYYEARAT----HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       119 ~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      +|.+-++++.+.   .++..+|+++...|+.+..+++    ..|++++.             +++++.++++...+++.+
T Consensus       150 atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~~~~v~vq~  216 (954)
T PRK12566        150 ATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHAVFGALLQY  216 (954)
T ss_pred             hhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCCEEEEEEEC
Confidence            665555444333   2235789999999988776554    44555542             234445555677888889


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVI  220 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li  220 (319)
                      |+ -.|.+   +++++|.+++++.|.+++
T Consensus       217 P~-~~G~i---~d~~~i~~~~h~~gal~~  241 (954)
T PRK12566        217 PD-THGEI---RDLRPLIDQLHGQQALAC  241 (954)
T ss_pred             CC-CceEE---ccHHHHHHHHHHcCCEEE
Confidence            87 46888   679999999999998866

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=96.73  E-value=0.049  Score=48.81  Aligned_cols=209  Identities=11%  Similarity=0.046  Sum_probs=109.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-----CCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-----YSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-----Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      +.+.||+.|-.      ..|+++++.+++-+......+     -++ ..-...+.+...+.+.+.++++-+.+=+++-.|
T Consensus         4 ~~~~nFsaGPa------~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG   77 (365)
T COG1932           4 PRVYNFSAGPA------ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG   77 (365)
T ss_pred             CCCCCCCCCcc------cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence            56788998863      456777666665544321111     111 111233344444444555565655555566667


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHhhCCCeEEEEecc-CCCC--CcCCHHHHHhhhccCceEEEEcCCCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYY-EARATHSHLEVRHFDLL-PAKG--WEVDLDAVEALADENTVALVIINPGN  194 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~-~~~~--~~~d~~~l~~~l~~~~~~v~l~~p~n  194 (319)
                      +|.....+...|...+.+-.+..-.|... ...++..+-.+...... ...+  ..++++..+  +.++..-|.+|.-..
T Consensus        78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT  155 (365)
T COG1932          78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET  155 (365)
T ss_pred             cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence            89999999999876543313334444332 24455555322211111 1222  233433332  233322355555455


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG  274 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~  274 (319)
                      -+|+.++.  ...+   .  .+.++++|.+-.-+..    +..+..+     -++-.|.-|.+|..|  ++.++..    
T Consensus       156 i~Gv~v~~--~p~~---~--~~~~~v~D~SS~ilsr----~iDvsk~-----dviyagaQKnlGpaG--ltvvIvr----  213 (365)
T COG1932         156 ISGVEVPE--LPDI---G--SDGLLVADASSAILSR----PIDVSKY-----DVIYAGAQKNLGPAG--LTVVIVR----  213 (365)
T ss_pred             ccceEccC--CCCC---C--CCceEEEecccHHhcC----CCChhHc-----ceEEEehhhccCccc--eEEEEEc----
Confidence            67887551  1111   1  1278999997776542    2222222     277779999998888  6766663    


Q ss_pred             CccchHHHHHHHH
Q 020968          275 ILQDSGIVDSIKS  287 (319)
Q Consensus       275 ~~~~~~~~~~~~~  287 (319)
                          ++++.+++.
T Consensus       214 ----~~~l~r~~~  222 (365)
T COG1932         214 ----PDLLERAES  222 (365)
T ss_pred             ----HHHHhcccc
Confidence                246666544

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=96.34  E-value=0.041  Score=47.98  Aligned_cols=232  Identities=11%  Similarity=0.086  Sum_probs=123.1

Q ss_pred             CcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc---CCCCEEE
Q 020968           63 TASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA---RPGANIL  138 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~---~~gd~Vl  138 (319)
                      ..|.+.+|...++..... .++    -..+|.+....+....    -.-+-+++++++++|..++++...   +.-|.| 
T Consensus        62 chp~VV~A~~kQmat~~tN~RF----lhd~lv~cA~~l~stl----PeLsvc~F~NSGSEANDLALRLAR~ftkhqDvI-  132 (452)
T KOG1403|consen   62 CHPEVVRAGAKQMATISTNNRF----LHDELVQCARTLTSTL----PELSVCFFVNSGSEANDLALRLARNFTKHQDVI-  132 (452)
T ss_pred             CCHHHHHHHHHHHhHhcccchh----hHHHHHHHHHHHhhcC----CCceEEEEecCCchhhHHHHHHHHhhcccCceE-
Confidence            457777777766654221 122    2345555555554331    123467899999999999987653   333544 


Q ss_pred             EcCCCCcchHHHHhh-------CC--C-eEEEEeccC--C---CCCcC------C-----HHHHHhhh----ccCc--eE
Q 020968          139 LPRPGFPYYEARATH-------SH--L-EVRHFDLLP--A---KGWEV------D-----LDAVEALA----DENT--VA  186 (319)
Q Consensus       139 ~~~p~~~~~~~~~~~-------~g--~-~~~~~~~~~--~---~~~~~------d-----~~~l~~~l----~~~~--~~  186 (319)
                      +-+..|.++......       .|  . +..++.+.+  +   +.+..      |     -+.+++.+    ..+.  .+
T Consensus       133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA  212 (452)
T KOG1403|consen  133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA  212 (452)
T ss_pred             EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence            444444433221110       01  0 111111111  0   00110      1     12233332    2221  12


Q ss_pred             EEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968          187 LVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      .+-.+-..=.|.++|+.. .+++++..+..|.+.|.||..-+|..-|..+..++.++--+.   |-++.|. ...|..++
T Consensus       213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD---IVtmgKp-mGNGhPVa  288 (452)
T KOG1403|consen  213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD---IVTMGKP-MGNGHPVA  288 (452)
T ss_pred             HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccc---hheeccc-CCCCCeee
Confidence            222233444566665554 788889999999999999999998766666655555442122   2356788 57899999


Q ss_pred             EEEeeCCCCCccchHHHHHHHHh-hhh--cCCcchHHHHHHHHHH--hccccccc
Q 020968          266 WLVTSDPNGILQDSGIVDSIKSF-LNI--SSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       266 ~i~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      .++.-.        ++.+.+..- ...  +.+.++++..+...++  ++++.+++
T Consensus       289 ~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~  335 (452)
T KOG1403|consen  289 AVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQE  335 (452)
T ss_pred             EEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHH
Confidence            998742        456655541 111  3455666665544433  45555443

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=96.20  E-value=0.1  Score=50.20  Aligned_cols=168  Identities=18%  Similarity=0.167  Sum_probs=106.7

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHH---HHHHhc-CCC----CEEEEcCCCCcchHHHHhhCCC
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEV---ILTVLA-RPG----ANILLPRPGFPYYEARATHSHL  156 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~---~~~~l~-~~g----d~Vl~~~p~~~~~~~~~~~~g~  156 (319)
                      ..|+.++-+.+.+.+-...    ..|++.+-++ +.++-++   ++++.. ..|    ..-++|...|......+...|.
T Consensus       577 aqGY~~lf~~Le~~Lc~iT----G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm  652 (1001)
T KOG2040|consen  577 AQGYQQLFTELEKDLCEIT----GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM  652 (1001)
T ss_pred             HhhHHHHHHHHHHHhheee----cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence            3677777777777775533    3566766533 2233222   334432 233    3456788888878888999999


Q ss_pred             eEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC
Q 020968          157 EVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT  233 (319)
Q Consensus       157 ~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~  233 (319)
                      +++++.++..  ..+|..+|++..++   +-.++.++.|+. .|+. . +.+.+++++.+++|.-+..|.+-..-.    
T Consensus       653 kvvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf-E-~~i~d~cd~iHehGGQVYlDGANMNAq----  723 (1001)
T KOG2040|consen  653 KVVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF-E-EGIDDICDIIHEHGGQVYLDGANMNAQ----  723 (1001)
T ss_pred             EEEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEecccc-cccc-c-ccHHHHHHHHHhcCCEEEecCCCccce----
Confidence            9999998654  45999999887654   346777888863 3443 1 569999999999999999999776422    


Q ss_pred             CCCCCcccCCCCCeEEEecCccccCCC----cceeeEEE
Q 020968          234 PFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLV  268 (319)
Q Consensus       234 ~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~  268 (319)
                        +-+.+..+.+..++=-.++|+|.+|    |-.+|=|.
T Consensus       724 --VGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIg  760 (1001)
T KOG2040|consen  724 --VGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIG  760 (1001)
T ss_pred             --ecccCCccccccceeecccceeeecCCCCCCCCCccc
Confidence              1122222222224444677887665    44455443

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=95.12  E-value=0.71  Score=40.67  Aligned_cols=206  Identities=13%  Similarity=0.097  Sum_probs=125.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC-CCCCCCCC-------cCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA-RFNCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      +.++|.|..+.-.     -.|......+...++.- .-.-|+..       .+.+..-..++...      +...++|.+
T Consensus        65 d~~~iYlcGNSLG-----LmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Evav  133 (465)
T KOG3846|consen   65 DKPVIYLCGNSLG-----LMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAV  133 (465)
T ss_pred             CCCeEEEeccccc-----cCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhh
Confidence            4567777776644     23455555555554431 01122222       23344555555555      347889999


Q ss_pred             eCCHHHHHHHHHHHhcCCC---CEEEEcCCCCcc----hHHHHhhCCCeEE--EEeccC-CCCCcCCHHHHHhhhcc---
Q 020968          116 TLGCTQAIEVILTVLARPG---ANILLPRPGFPY----YEARATHSHLEVR--HFDLLP-AKGWEVDLDAVEALADE---  182 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~~~g---d~Vl~~~p~~~~----~~~~~~~~g~~~~--~~~~~~-~~~~~~d~~~l~~~l~~---  182 (319)
                      .++.|..++.++.++.+|-   -+|+.+.-.|++    ....++..|+.+.  .+-+.+ ++.-.+..+++.+.+..   
T Consensus       134 mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngD  213 (465)
T KOG3846|consen  134 MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGD  213 (465)
T ss_pred             HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCC
Confidence            9999999999999987653   578888766654    4566777787532  222323 22335667777777653   


Q ss_pred             CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968          183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW  262 (319)
Q Consensus       183 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~  262 (319)
                      ...+|+++..+.-||+.++   +.+|-..-+..|.++=.|-++.-    +.-+..+..++-   .+.+...-|......-
T Consensus       214 eiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgV---DFACWCSYKYlnaGaG  283 (465)
T KOG3846|consen  214 EIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGV---DFACWCSYKYLNAGAG  283 (465)
T ss_pred             eEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCC---ceEEEeeecccccCCC
Confidence            4566777788999999987   77777555667899989998875    222333333333   3566666676544322


Q ss_pred             eeeEEEee
Q 020968          263 RLGWLVTS  270 (319)
Q Consensus       263 r~G~i~~~  270 (319)
                      .+|-+.+.
T Consensus       284 gIgGlFvH  291 (465)
T KOG3846|consen  284 GIGGLFVH  291 (465)
T ss_pred             ccceeeee
Confidence            34444433

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=94.42  E-value=0.35  Score=43.32  Aligned_cols=87  Identities=26%  Similarity=0.309  Sum_probs=54.4

Q ss_pred             CHHHHHhhhcc-----CceEEEEcCC-CCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCcccCC
Q 020968          172 DLDAVEALADE-----NTVALVIINP-GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFGS  243 (319)
Q Consensus       172 d~~~l~~~l~~-----~~~~v~l~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~  243 (319)
                      .++++|+++..     .+.+.++.-| ....| ...|+.-.+++.+++++|++.+|+||++-+..-+|.-.. .-..+..
T Consensus       254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~  333 (484)
T KOG1405|consen  254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS  333 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence            35666666632     3555555555 55555 567888899999999999999999999987544442110 0111122


Q ss_pred             CCCeEEEecCccccCCCc
Q 020968          244 IVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G  261 (319)
                      ...++   +|||-|-.+|
T Consensus       334 PpD~v---TFSKK~q~gG  348 (484)
T KOG1405|consen  334 PPDVV---TFSKKFQTGG  348 (484)
T ss_pred             Cccce---ehhhhhhcCc
Confidence            22233   7899974443

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=89.49  E-value=5  Score=34.73  Aligned_cols=136  Identities=21%  Similarity=0.213  Sum_probs=75.5

Q ss_pred             HHHHHHHHhc--CCCCE-EEEcCCCCcchHHHHhhCCCeEEEEeccCCC-CCcCCHHHHHhhhcc-Cc-eEEEEcCCCCc
Q 020968          122 AIEVILTVLA--RPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALADE-NT-VALVIINPGNP  195 (319)
Q Consensus       122 ai~~~~~~l~--~~gd~-Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~-~~-~~v~l~~p~np  195 (319)
                      .+.+++.++.  +|..+ |+-..-.-.+..+..-..|.+.+.+....+. ...-|++.++..+.+ +. +++++.+.. .
T Consensus        88 slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~stt-s  166 (432)
T KOG3843|consen   88 SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTT-S  166 (432)
T ss_pred             cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecc-c
Confidence            3555555553  34333 3333333333445556678888777654332 344477887777654 22 233332221 1


Q ss_pred             cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEecCccccCCC
Q 020968          196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVP  260 (319)
Q Consensus       196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~s~sK~~~~~  260 (319)
                      .=..-+++.+++|..+|..|+++=|+..+|+--.-.  ...-+..-..-++ ..++.|+.|.|.+|
T Consensus       167 cfapr~pd~leaiaaica~~diphivnnayglqsee--~i~~iaa~~~~grida~vqsldknf~vp  230 (432)
T KOG3843|consen  167 CFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE--CIHKIAAAAECGRIDAFVQSLDKNFMVP  230 (432)
T ss_pred             ccCCCCCchHHHHHHHHHccCchhhhccccccchHH--HHHHHHHHhhhccHHHHHHHhhhcceee
Confidence            112223477999999999999999999999863210  0001111111112 26678999999887

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=88.32  E-value=17  Score=31.96  Aligned_cols=195  Identities=11%  Similarity=0.030  Sum_probs=104.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--------CCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--------NCYSST--VGILPARRAIADYLNRDLPYKLSPDDV  113 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--------~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i  113 (319)
                      ...++||+.|-.      .+|..++..+++.+-....        .+.+.+  .-+.+.+..+.+++    +++-+.+-+
T Consensus         5 ~~~vvnFaaGPA------klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLl----niPdn~~vl   74 (370)
T KOG2790|consen    5 PERVVNFAAGPA------KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELL----NIPDNYKVL   74 (370)
T ss_pred             ccceeecCCCcc------cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHH----cCCCceeEE
Confidence            568999999963      4566666666554433110        111111  11233444455555    334444455


Q ss_pred             EEeCCHHHHHHHHHHHhc--CCC---CEEEEcCCCCcchHHHHhhCCCe-EEEEeccCCC-CCcCCHHHHHhhhccCceE
Q 020968          114 YLTLGCTQAIEVILTVLA--RPG---ANILLPRPGFPYYEARATHSHLE-VRHFDLLPAK-GWEVDLDAVEALADENTVA  186 (319)
Q Consensus       114 ~~~~G~t~ai~~~~~~l~--~~g---d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~  186 (319)
                      ++-.|+|..+.++...++  +.|   |-|++-.++-..+... +.+|.. .+..+..... +-.+|.+.++.  +++.+-
T Consensus        75 f~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~y  151 (370)
T KOG2790|consen   75 FLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASY  151 (370)
T ss_pred             EEeCCCcccccccchhhhccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc--CCCccE
Confidence            777888888888877776  444   5566655555555444 344443 3333332111 11245554443  233446


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      +++|.--...|+-++.-.      +-..++.+++.|-+.-.+.    .+..+..     .-+++.+.-|..|.+|+.+=.
T Consensus       152 vyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk-----~gvi~aGAQKN~G~aG~Tvvi  216 (370)
T KOG2790|consen  152 VYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSK-----FGVIFAGAQKNVGPAGVTVVI  216 (370)
T ss_pred             EEEecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchh-----cceEEeccccccCccccEEEE
Confidence            666654445577654222      2234578888988665543    1222222     237788899998888865433

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=87.97  E-value=8.6  Score=32.40  Aligned_cols=99  Identities=15%  Similarity=0.265  Sum_probs=64.7

Q ss_pred             cEEEeCCHHHHHHHHHHHhcCCCCEE--------------EEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHH
Q 020968          112 DVYLTLGCTQAIEVILTVLARPGANI--------------LLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE  177 (319)
Q Consensus       112 ~i~~~~G~t~ai~~~~~~l~~~gd~V--------------l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  177 (319)
                      -+.+-+|+-.+..++..++ +.|..|              ....|........++.+|+.+......-.  ..-..+++.
T Consensus         3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~   79 (223)
T COG2102           3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK   79 (223)
T ss_pred             EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence            4677888888877766665 344322              22222223345677889999887776431  223566777


Q ss_pred             hhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968          178 ALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI  220 (319)
Q Consensus       178 ~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  220 (319)
                      +++.. +...|+       +|.+++.-++..+-++|++.|+.++
T Consensus        80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~  116 (223)
T COG2102          80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY  116 (223)
T ss_pred             HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence            66653 223443       6999999999999999999998753

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=83.73  E-value=13  Score=31.12  Aligned_cols=95  Identities=18%  Similarity=0.213  Sum_probs=56.3

Q ss_pred             CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      +....+++..||..|...+ +.|++.|..|.+.+|....-.......| ++..+.-    .  +..+.++     +..+ 
T Consensus         7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl~-----~~~l-   72 (205)
T TIGR01470         7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADILE-----GAFL-   72 (205)
T ss_pred             cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHhC-----CcEE-
Confidence            4566899999998887755 5566788888888877654332233333 3333332    1  2222221     2334 


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEE-EeC
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI-ADE  223 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~D~  223 (319)
                      ++..++++       +.-..+...|++.++++- .|+
T Consensus        73 Vi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~  102 (205)
T TIGR01470        73 VIAATDDE-------ELNRRVAHAARARGVPVNVVDD  102 (205)
T ss_pred             EEECCCCH-------HHHHHHHHHHHHcCCEEEECCC
Confidence            44555554       335788999999998873 444

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=83.42  E-value=12  Score=31.54  Aligned_cols=91  Identities=16%  Similarity=0.165  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHhcCCCCEEE-EcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccc
Q 020968          119 CTQAIEVILTVLARPGANIL-LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG  197 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG  197 (319)
                      |..|-. ++++|.+.+-+|. +..+.-......++..|++++..+.+       |.+.|.++++. ...|+++.+.....
T Consensus         8 G~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g-~d~v~~~~~~~~~~   78 (233)
T PF05368_consen    8 GNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG-VDAVFSVTPPSHPS   78 (233)
T ss_dssp             SHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT-CSEEEEESSCSCCC
T ss_pred             cHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC-CceEEeecCcchhh
Confidence            444433 4445555664443 45555333345567789987755542       88899998884 44555555533222


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEE
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIA  221 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~  221 (319)
                      ..   +.-..+++.|++.|+-.++
T Consensus        79 ~~---~~~~~li~Aa~~agVk~~v   99 (233)
T PF05368_consen   79 EL---EQQKNLIDAAKAAGVKHFV   99 (233)
T ss_dssp             HH---HHHHHHHHHHHHHT-SEEE
T ss_pred             hh---hhhhhHHHhhhccccceEE
Confidence            22   5568888999988876554

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	319
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		7e-55
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		2e-54
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		4e-36
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		3e-28
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		2e-20
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		1e-17
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		1e-17
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		1e-17
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		1e-17
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		1e-17
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		2e-17
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		2e-17
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		2e-17
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		5e-17
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		1e-16
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-16
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		1e-15
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		1e-15
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		2e-14
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		2e-14
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		3e-14
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		8e-14
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		4e-13
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		6e-13
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		7e-13
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		1e-12
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		1e-12
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		1e-12
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		1e-12
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		3e-12
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		4e-12
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		9e-12
3ihj_A	498	Human Alanine Aminotransferase 2 In Complex With Pl		9e-12
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		2e-11
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		3e-11
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		5e-11
3l8a_A	421	Crystal Structure Of Metc From Streptococcus Mutans		6e-11
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		6e-11
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		1e-10
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		2e-10
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		5e-10
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		1e-09
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		3e-09
3b1c_A	392	Crystal Structure Of Betac-S Lyase From Streptococc		7e-09
3f6t_A	533	Crystal Structure Of Aspartate Aminotransferase (E.		1e-08
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		1e-08
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		3e-08
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		5e-08
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		6e-08
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		8e-08
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		1e-07
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		1e-07
1d2f_A	390	X-Ray Structure Of Maly From Escherichia Coli: A Py		2e-07
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		2e-07
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		2e-07
1c7n_A	399	Crystal Structure Of Cystalysin From Treponema Dent		3e-07
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		7e-07
3fdb_A	377	Crystal Structure Of A Putative Plp-Dependent Beta-		8e-07
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		8e-07
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		9e-07
3dzz_A	391	Crystal Structure Of A Putative Plp-Dependent Amino		1e-06
3g7q_A	417	Crystal Structure Of Valine-Pyruvate Aminotransfera		6e-06
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		7e-06
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		7e-06
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		9e-06
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		1e-05
3t32_B	383	Crystal Structure Of A Putative C-S Lyase From Baci		2e-05
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		3e-05
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		3e-05
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		5e-05
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		5e-05
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		5e-05
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		6e-05
3if2_A	444	Crystal Structure Of Putative Amino-Acid Aminotrans		1e-04
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-04
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		2e-04
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		2e-04
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		2e-04
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		2e-04
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		3e-04

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score =  210 bits (535), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 172/295 (58%), Gaps = 8/295 (2%)
Query: 28  VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV 87
           +R +++++    N N T  +I L  GDP+ F +  T      A+  ++ S ++N Y+ ++
Sbjct: 16  IRAIVDNMKVKPNPNKT--VISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSI 73
Query: 88  GILPARRAIADYLNR-DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
           G L +R  +A Y +  + P  L   DV LT GC+QAIE+ L VLA PG NIL+PRPGF  
Sbjct: 74  GYLSSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSL 131
Query: 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206
           Y   A    +EV+ ++LLP K WE+DL  +E+L DE T  LV+ NP NPCG+V++ +HLQ
Sbjct: 132 YRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQ 191
Query: 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
           KI   A++  + ++ADE+Y  + F +  + PM    + VP+L+ G ++ RW+VPGWRLGW
Sbjct: 192 KILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGW 251
Query: 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ-FLKSSRKLKRNSFLK-SLTF 319
           ++  D   I  +  I D +         P T +Q  LKS  +     F + +L+F
Sbjct: 252 ILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSF 305

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 162/274 (59%), Gaps = 6/274 (2%)
Query: 28  VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV 87
           +R +++++    N N T  +I L  GDP+ F +  T      A+  ++ S ++N Y+ ++
Sbjct: 39  IRAIVDNMKVKPNPNKT--MISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSI 96
Query: 88  GILPARRAIADYLNR-DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
           G L +R  IA Y +  + P  L   DV LT GC+QAI++ L VLA PG NIL+PRPGF  
Sbjct: 97  GFLSSREEIASYYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSL 154
Query: 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206
           Y+  A    +EV+ ++LLP K WE+DL  +E L DE T  L++ NP NPCG+V++ +HLQ
Sbjct: 155 YKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQ 214
Query: 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
           KI   A +  + ++ADE+Y  + F +  + P+    + VP+L+ G ++KRW+VPGWRLGW
Sbjct: 215 KILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGW 274
Query: 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           ++  D   I  +  I D +         P T +Q
Sbjct: 275 ILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQ 307

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 135/266 (50%), Gaps = 12/266 (4%)
Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           +P+I L  GDP+   +  T++  +  +  ++ S   N Y  TVG   AR A+A +     
Sbjct: 33  KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSF 92
Query: 105 PYK------LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEV 158
            +K      +  D+V L  G +  I + +T +   G   L+P+PGFP+YE       + +
Sbjct: 93  VHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGM 152
Query: 159 RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218
             ++  P   WE DLD +  L D+ T  L++ NP NPCG+ ++ +H++ I   A++L + 
Sbjct: 153 HFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLP 212
Query: 219 VIADEVYDHLAFG----NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274
           + +DE+Y  + F     N  F  +  F + VP + LG  +   +VPGWRLGWL+  DP+G
Sbjct: 213 LFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHG 272
Query: 275 ILQDSGIVDSIKSFLNISSDPATFIQ 300
                  ++ +K    +   P T +Q
Sbjct: 273 --NGPSFLEGLKRVGMLVCGPCTVVQ 296

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 5/255 (1%)
Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           +I L  GDP  F  F+      +A   +++    N Y  + G+   R+AI +   R    
Sbjct: 40  VIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
            ++PDDV +T   T+A+++I   L  PG  IL+P P +P Y         +   +  +  
Sbjct: 98  DITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEE 157
Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
           + W+ D+D +     + T A+ +INP NP G +Y  + L++I   A +  I VI+DE+YD
Sbjct: 158 EDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYD 217
Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286
            + +      P G     VPV+ +  +SK +   GWRLG++   DP   L  S + ++I 
Sbjct: 218 LMTYEGEHISP-GSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL--SEVREAID 274
Query: 287 SFLNISSDPATFIQF 301
               I   P T  QF
Sbjct: 275 RLARIRLCPNTPAQF 289

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 31/228 (13%)
Query: 50  LGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYK 107
           LG G PS  P           ++ +VR A  R + Y+   G+   R A+A+       + 
Sbjct: 30  LGQGFPSNPPP--------PFLLEAVRRALGRQDQYAPPAGLPALREALAEE------FA 75
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVR--HFDLLP 165
           + P+ V +T G T+A+ V+L  L  PG  +++  P F  Y   A  +  + R    DL P
Sbjct: 76  VEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP 135
Query: 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
            +G+ +DL A+E      T AL++  P NP G V+  + L+ IA  A+   + +I+DEVY
Sbjct: 136 -EGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVY 194
Query: 226 DHLAFGNTP-----FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           D L +G  P     F P   F       T+GS  KR    G+R+GW+V
Sbjct: 195 DELYYGERPRRLREFAPERTF-------TVGSAGKRLEATGYRVGWIV 235

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           + +I LG G+P           A +A+   +       Y   +G+L  R AIA+ L +  
Sbjct: 25  KDVISLGIGEPDFDTPQHIKEYAKEALDKGL-----THYGPNIGLLELREAIAEKLKKQN 79
Query: 105 PYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRH 160
             +  P  ++ + LG  QA  + L+   + G  +L+P P F  Y      A    +EV  
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
           ++      + +++D ++    + T AL+I +P NP G V T + L++IA+   +  ++VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 221 ADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279
           +DEVY+H  + +     +    G     +T+   SK + + GWRLG++    P+ I++  
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWIIE-- 252
Query: 280 GIVDSIKSFLNISSDPATFIQF-----LKSSRKLK 309
                +K  +  ++ P TFIQ+     LK  R  K
Sbjct: 253 ---RMVKFQMYNATCPVTFIQYAAAKALKDERSWK 284

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           + +I LG G+P           A +A+   +       Y   +G+L  R AIA+ L +  
Sbjct: 26  KDVISLGIGEPDFDTPQHIKEYAKEALDKGL-----THYGPNIGLLELREAIAEKLKKQN 80
Query: 105 PYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRH 160
             +  P  ++ + LG  QA  + L+   + G  +L+P P F  Y      A    +EV  
Sbjct: 81  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
           ++      + +++D ++    + T AL+I +P NP G V T + L++IA+   +  ++VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 221 ADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279
           +DEVY+H  + +     +    G     +T+   SK + + GWRLG++    P+ I++  
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWIIE-- 253
Query: 280 GIVDSIKSFLNISSDPATFIQF-----LKSSRKLK 309
                +K  +  ++ P TFIQ+     LK  R  K
Sbjct: 254 ---RMVKFQMYNATCPVTFIQYAAAKALKDERSWK 285

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 27/254 (10%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+   GI   R A+A+   R+    ++P++  +T+G +QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  Y      +   V   + LP +G+  D + V       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
           + L+ +A  A +    +++DE+Y+HL +    F P    G + P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLV----------------TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304
           GWR+G+                  T+ P+ I Q +    ++++  N  +  A F++  + 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWA----TLEALTNQEASRA-FVEMARE 294
Query: 305 SRKLKRNSFLKSLT 318
           + + +R+  L+ LT
Sbjct: 295 AYRRRRDLLLEGLT 308

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 27/254 (10%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+   GI   R A+A+   R+    ++P++  +T+G +QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  Y      +   V   + LP +G+  D + V       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
           + L+ +A  A +    +++DE+Y+HL +    F P    G + P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLV----------------TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304
           GWR+G+                  T+ P+ I Q +    ++++  N  +  A F++  + 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWA----TLEALTNQEASRA-FVEMARE 294
Query: 305 SRKLKRNSFLKSLT 318
           + + +R+  L+ LT
Sbjct: 295 AYRRRRDLLLEGLT 308

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 27/254 (10%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+   GI   R A+A+   R+    ++P++  +T+G +QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  Y      +   V   + LP +G+  D + V       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
           + L+ +A  A +    +++DE+Y+HL +    F P    G + P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLV----------------TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304
           GWR+G+                  T+ P+ I Q +    ++++  N  +  A F++  + 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWA----TLEALTNQEASRA-FVEMARE 294
Query: 305 SRKLKRNSFLKSLT 318
           + + +R+  L+ LT
Sbjct: 295 AYRRRRDLLLEGLT 308

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 27/254 (10%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+   GI   R A+A+   R+    ++P++  +T+G +QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  Y      +   V   + LP +G+  D + V       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
           + L+ +A  A +    +++DE+Y+HL +    F P    G + P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLV----------------TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304
           GWR+G+                  T+ P+ I Q +    ++++  N  +  A F++  + 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWA----TLEALTNQEASRA-FVEMARE 294
Query: 305 SRKLKRNSFLKSLT 318
           + + +R+  L+ LT
Sbjct: 295 AYRRRRDLLLEGLT 308

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
           P F T    V+  V  ++      Y+   GI   R  IA  +       +SPD V +T G
Sbjct: 51  PDFPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNG 109
Query: 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA 178
             QA+      L  PG  +++  P +  Y  +   +   V   +   +K ++  L+ VE 
Sbjct: 110 AKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG 169
Query: 179 LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238
           L    T A++I +P NP G VY  + L+ +   AKK    +I+DEVYD L + +     +
Sbjct: 170 LLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSIL 229
Query: 239 GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
            V      ++ +   SK   + GWR+G+L++S+
Sbjct: 230 DVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE 262

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 27/254 (10%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+   GI   R A+A+   R+    ++P++  +T+G  QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  Y      +   V   + LP +G+  D + V       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
           + L+ +A  A +    +++DE+Y+HL +    F P    G + P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLV----------------TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304
           GWR+G+                  T+ P+ I Q +    ++++  N  +  A F++  + 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWA----TLEALTNQEASRA-FVEMARE 294
Query: 305 SRKLKRNSFLKSLT 318
           + + +R+  L+ LT
Sbjct: 295 AYRRRRDLLLEGLT 308

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
           P  +T  V  + I  +     +  YS + GI   R A A Y  R     + P++V +T G
Sbjct: 53  PDLKTPEVFFERIYENKPEVVY--YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNG 110
Query: 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA 178
            ++AI     V+A PG  IL+  P +  Y A A  + +++        +G+ +  + +E+
Sbjct: 111 GSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRXEEGFAIPQN-LES 169
Query: 179 LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238
             +E T  +V+ NP NP G VY     + + E A++ G+ +I DEVY  + F        
Sbjct: 170 FINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVF-------R 222
Query: 239 GVFGSIV-----PVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275
           G F S +      V+ + S+S ++   G R+G L+T +   I
Sbjct: 223 GEFASALSIESDKVVVIDSVSXKFSACGARVGCLITRNEELI 264

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 27/254 (10%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           Y+   GI   R A+A+   R+    ++P++  +T+G  QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  Y      +   V   + LP +G+  D + V       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
           + L+ +A  A +    +++DE+Y+HL +    F P    G + P   LT+   +  + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 261 GWRLGWLV----------------TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304
           GWR+G+                  T+ P+ I Q +    ++++  N  +  A F++  + 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWA----TLEALTNQEASRA-FVEMARE 294
Query: 305 SRKLKRNSFLKSLT 318
           + + +R+  L+ LT
Sbjct: 295 AYRRRRDLLLEGLT 308

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 17/252 (6%)
Query: 33  NSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR-SARFNCYSSTVGILP 91
           N  +E +       ++ LG G    FP F     AV+A  H+V      N Y+ T G  P
Sbjct: 16  NPWVEFVKLASEHDVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP 71
Query: 92  ARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-- 148
             + +A +    L  ++ P  +V +T+G   A+      L   G  +++  P F  YE  
Sbjct: 72  LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPM 131
Query: 149 -----ARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
                 R     L+   +++ +L  +  W++D   +       T ALV+  P NP G V+
Sbjct: 132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVF 191
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIV 259
           + + L+ +A   ++  ++ I DEVY  + +     + +    G     LT+GS  K +  
Sbjct: 192 SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSA 251
Query: 260 PGWRLGWLVTSD 271
            GW++GW++  D
Sbjct: 252 TGWKVGWVLGPD 263

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 17/252 (6%)
Query: 33  NSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR-SARFNCYSSTVGILP 91
           N  +E +       ++ LG G    FP F     AV+A  H+V      N Y+ T G  P
Sbjct: 16  NPWVEFVKLASEHDVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP 71
Query: 92  ARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-- 148
             + +A +    L  ++ P  +V +T+G   A+      L   G  +++  P F  YE  
Sbjct: 72  LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPM 131
Query: 149 -----ARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
                 R     L+   +++ +L  +  W++D   +       T ALV+  P NP G V+
Sbjct: 132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVF 191
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIV 259
           + + L+ +A   ++  ++ I DEVY  + +     + +    G     LT+GS    +  
Sbjct: 192 SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSA 251
Query: 260 PGWRLGWLVTSD 271
            GW++GW++  D
Sbjct: 252 TGWKVGWVLGPD 263

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 17/252 (6%)
Query: 33  NSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR-SARFNCYSSTVGILP 91
           N  +E +       ++ LG G    FP F     AV+A  H+V      N Y+ T G  P
Sbjct: 16  NPWVEFVKLASEHDVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP 71
Query: 92  ARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-- 148
             + +A +    L  ++ P  +V +T+G   A+      L   G  +++  P F  YE  
Sbjct: 72  LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPM 131
Query: 149 -----ARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
                 R     L+   +++ +L  +  W++D   +       T ALV+  P NP G V+
Sbjct: 132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVF 191
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIV 259
           + + L+ +A   ++  ++ I DEVY  + +     + +    G     LT+GS    +  
Sbjct: 192 SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSA 251
Query: 260 PGWRLGWLVTSD 271
            GW++GW++  D
Sbjct: 252 TGWKVGWVLGPD 263

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWE 170
           +V +T+G T+AI   +  L  PG+ +LL  P +  Y      +        L+P  +G+ 
Sbjct: 88  EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFA 147
Query: 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
           +D DA+       T AL+I +P NP G V +   L  IAE A    ++VI DEVY+HL F
Sbjct: 148 LDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 231 GNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGW 266
            +   +P+  F G     +T+ S +  +   GW++GW
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW 244

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 17/237 (7%)
Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           R LI LG G    F S+     A+     ++     N YS T G      ++    +   
Sbjct: 57  RELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
             +L  ++V +T G  + I   L  L   G  +++  P F  Y         +V +  + 
Sbjct: 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPIN 172
Query: 165 PAKG----------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214
           P K           W +D +  E      T A++I  P NP G V+T + L  +     K
Sbjct: 173 PPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVK 232
Query: 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL--GSISKRWIVPGWRLGWLVT 269
             +++I+DEVY+HL F ++ F  +      +  LTL  GS    +   GWR+GW+++
Sbjct: 233 HNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLS 288

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 29/235 (12%)
Query: 53  GDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD 112
           G+PS  P+ +  +  +  +V    S   + Y+S  G +  R AIA++LN       + D+
Sbjct: 43  GNPS-IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADN 101
Query: 113 VYLTLGCTQAIEVILTVLARPGANILLP-RPGFPYYE-------ARATHSHLEVRHFDLL 164
           +Y T G   ++ +    L     +  +   P FP Y+       AR      +  HF   
Sbjct: 102 LYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHF--- 158
Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE----TAKKLG--IM 218
                ++D DA+E   + +T  ++I +P NP G VY+ + ++K+++     +K++G  I 
Sbjct: 159 -----QIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIF 213
Query: 219 VIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
           +IADE Y  + +     PFV      ++V      S SK   +PG R+G+++  D
Sbjct: 214 IIADEPYREIVYDGIKVPFVTKYYDNTLV----CYSYSKSLSLPGERIGYVLVPD 264

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK---- 167
           +V +T+G  +A+   +      G  +++  P F  YE     +    R   L P K    
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 168 ----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
                W +D + +EAL +E T  ++I  P NP G V     L+ +A   KK  ++ ++DE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 224 VYDHLAFGNTPFVPMGVF---GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280
           VY+H+ F   PF  + +    G     +T+GS  K + + GW++GW     P  +L++  
Sbjct: 223 VYEHMVF--EPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW--AYGPEALLKNLQ 278
Query: 281 IV 282
           +V
Sbjct: 279 MV 280

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK---- 167
           +V +T+G  +A+   +      G  +++  P F  YE     +    R   L P K    
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 168 ----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
                W +D + +EAL +E T  ++I  P NP G V     L+ +A   KK  ++ ++DE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 224 VYDHLAFGNTPFVPMGVF---GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280
           VY+H+ F   PF  + +    G     +T+GS    + + GW++GW     P  +L++  
Sbjct: 223 VYEHMVF--EPFEHIRICTLPGMWERTITIGSAGXTFSLTGWKIGW--AYGPEALLKNLQ 278
Query: 281 IV 282
           +V
Sbjct: 279 MV 280

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 17/191 (8%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPR 141
           YS + GI   R AIA  +     +  + DD++LT G +  + +++ +L R   + IL+P 
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 142 PGFPYYEAR-ATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGN 194
           P +P Y A  A H    V ++ L  + GW ++   V+   ++      N  ALV+INPGN
Sbjct: 190 PQYPLYSASIALHGGALVPYY-LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248
Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPF-------VPMGVFGSIVP 246
           P G V   ++   I +  K  G++++ADEVY +++   N  F         +G     +P
Sbjct: 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLP 308
Query: 247 VLTLGSISKRW 257
           +++  S+SK +
Sbjct: 309 LVSYQSVSKGY 319

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 4/217 (1%)
Query: 58  FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLT 116
           FP F       + + H V     N Y+   G+   R AIA    R   Y+   D D+ +T
Sbjct: 39  FPDFDGPRYLQERLAHHVAQGA-NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVT 97
Query: 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176
            G T+A+   +T L R G  ++   P +  Y      S   V+   L P   + VD    
Sbjct: 98  AGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEF 156
Query: 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236
            AL  E T  +++  P NP   V+       + +      I VI+DEVY+H+ F      
Sbjct: 157 AALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHA 216
Query: 237 PMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDP 272
            +     +    + + S  K + + GW++G+ V   P
Sbjct: 217 SVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP 253

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 36/248 (14%)
Query: 90  LPA-RRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
           LPA ++A+ D++   R       P+ + LT G T A E  +  LA PG  +L+P P +P 
Sbjct: 88  LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 147
Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
           ++      + +E+       + G+++   A+E    E          +++ NP NP G  
Sbjct: 148 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 207
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL----------- 248
            T   L  +    +  GI +I+DE+Y   AF +  F+      S++ VL           
Sbjct: 208 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI------SVMEVLKDRNCDENSEV 261
Query: 249 -----TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLK 303
                 + S+SK   +PG+R+G + ++D   +         + SF  +SS     +  + 
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV----AAATKMSSFGLVSSQTQHLLSAML 317
Query: 304 SSRKLKRN 311
           S +KL +N
Sbjct: 318 SDKKLTKN 325

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 36/248 (14%)
Query: 90  LPA-RRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
           LPA ++A+ D++   R       P+ + LT G T A E  +  LA PG  +L+P P +P 
Sbjct: 86  LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 145
Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
           ++      + +E+       + G+++   A+E    E          +++ NP NP G  
Sbjct: 146 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 205
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL----------- 248
            T   L  +    +  GI +I+DE+Y   AF +  F+      S++ VL           
Sbjct: 206 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI------SVMEVLKDRNCDENSEV 259
Query: 249 -----TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLK 303
                 + S+SK   +PG+R+G + ++D   +         + SF  +SS     +  + 
Sbjct: 260 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV----AAATKMSSFGLVSSQTQHLLSAML 315
Query: 304 SSRKLKRN 311
           S +KL +N
Sbjct: 316 SDKKLTKN 323

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 36/248 (14%)
Query: 90  LPA-RRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
           LPA ++A+ D++   R       P+ + LT G T A E  +  LA PG  +L+P P +P 
Sbjct: 88  LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 147
Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
           ++      + +E+       + G+++   A+E    E          +++ NP NP G  
Sbjct: 148 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 207
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL----------- 248
            T   L  +    +  GI +I+DE+Y   AF +  F+      S++ VL           
Sbjct: 208 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI------SVMEVLKDRNCDENSEV 261
Query: 249 -----TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLK 303
                 + S+SK   +PG+R+G + ++D   +         + SF  +SS     +  + 
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV----AAATKMSSFGLVSSQTQHLLSAML 317
Query: 304 SSRKLKRN 311
           S +KL +N
Sbjct: 318 SDKKLTKN 325

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
           P F T    VD  + S++  + + Y+ + GIL  R  I++         + PD++ +T G
Sbjct: 39  PDFNTPKPIVDEGIKSLKEGKTH-YTDSRGILELREKISELYKDKYKADIIPDNIIITGG 97
Query: 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD--LDAV 176
            +  +   L+ +   G  +L+  P +P Y+               L AK    D  ++++
Sbjct: 98  SSLGLFFALSSIIDDGDEVLIQNPCYPCYK----------NFIRFLGAKPVFCDFTVESL 147
Query: 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236
           E    + T A++I +P NP G V      ++I E A +    +I+DE+Y+ L +    + 
Sbjct: 148 EEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGKCYS 203
Query: 237 PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
            +    ++   + +   S  + + GWR+G+++++D
Sbjct: 204 AIEFDENLEKTILINGFSXLYAMTGWRIGYVISND 238

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           ++ LG G    FP     S   + +  +      N Y+   G     +A++    +    
Sbjct: 25  VVNLGQG----FPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQR 80
Query: 107 KLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARATHSHLEVRH 160
           ++ P +++ + +G   ++   +  L  PG  +++  P +  YE     A A    + +R 
Sbjct: 81  QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRS 140
Query: 161 FDLLPAKG-------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
               P  G       W  D   +E+     T A+++  P NP G VYT Q LQ IA+   
Sbjct: 141 ---KPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCV 197
Query: 214 KLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLV 268
           K   + I+DEVY+ L +     V +    G     +T+GS  K + V GW+LGW +
Sbjct: 198 KHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI 253

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 3/216 (1%)
Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
           P F T    V+A   ++   +   Y    G    R AIA  L RD       D++ +T G
Sbjct: 40  PDFNTPKHIVEAAKAALEQGKTR-YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNG 98
Query: 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA 178
             Q+I  ++  +  PG  +++P P +  Y      +              ++V  + +  
Sbjct: 99  GKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQ 158
Query: 179 LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238
                T  LV   P NP G VYT   ++ IA+ A + G+ V++DE+Y+ + + +   + +
Sbjct: 159 AITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSI 218
Query: 239 GVFG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           G     +    +     +K + + GWR+G+L    P
Sbjct: 219 GAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP 254

>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp Length = 498

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 59  PSF-RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR-DLPYKLSPDDVYLT 116
           PSF   A      I+ +        YS++ G+   R  +A Y+ R D      PD++YLT
Sbjct: 100 PSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLT 159
Query: 117 LGCTQAIEVILTVLARPGAN----ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172
            G +  I  IL +L   G      +++P P +P Y A  +       ++ L     W ++
Sbjct: 160 TGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALN 219
Query: 173 LD----AVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY-D 226
           ++    AV+   D  +   L IINPGNP G V + + ++ +   A +  + ++ADEVY D
Sbjct: 220 VNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD 279
Query: 227 HLAFGNTPF-------VPMG-VFGSIVPVLTLGSISKRWI-VPGWRLGWL 267
           ++   +  F         MG  + S V + +  S SK ++   G+R G++
Sbjct: 280 NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYM 329

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 21/236 (8%)
Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           ++ LG G    FP     S   + +  +      N Y+   G     +A++    +    
Sbjct: 25  VVNLGQG----FPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQR 80
Query: 107 KLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARATHSHLEVRH 160
           ++ P +++ + +G   ++   +  L  PG  +++  P +  YE     A A    + +R 
Sbjct: 81  QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRS 140
Query: 161 FDLLPAKG-------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
               P  G       W  D   +E+     T A+++  P NP G VYT Q LQ IA+   
Sbjct: 141 ---KPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCV 197
Query: 214 KLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLV 268
           K   + I+DEVY+ L +     V +    G     +T+GS    + V GW+LGW +
Sbjct: 198 KHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSI 253

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201
           PGF  Y      S  E+R + L  A GW++    +EAL   +   L +  P NP G +  
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPE 164
Query: 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261
              LQ IA+  K L I +I DE +       T F+P         +  L S++K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPG 222
Query: 262 WRLGWLVTSD 271
            RLG+LV SD
Sbjct: 223 LRLGYLVNSD 232

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 34/293 (11%)
Query: 10  NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPL-----------GHGDPSAF 58
           +Q G    E +K+  G   R      LE +  ++ R L+ L           G  +P  F
Sbjct: 33  SQEGIGMEENIKSMLGDVERFFSKKALE-MRASEVRELLKLVETSDIISLAGGLPNPKTF 91
Query: 59  PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTL 117
           P      + V+ +      A    Y +T G  P R  +  +L +   Y +S D D+ +T 
Sbjct: 92  PKEIIRDILVEIMEKYADKAL--QYGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITS 147
Query: 118 GCTQAIEVILTVLARPGANILLPRP-------GFPYYEARATHSHL--EVRHFDLLPAKG 168
           G  QA+++I  V   PG  +++  P        F +YE +     L  E    ++L  K 
Sbjct: 148 GSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEK- 206
Query: 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL 228
               L  +++   +  V   +    NP G        + + E A +   +V+ D+ Y  L
Sbjct: 207 ----LKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGEL 262
Query: 229 AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281
            +   P   +    +   V+ LG+ SK  + PG+R+GW+V  DP GI++   I
Sbjct: 263 RYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIRKMEI 312

>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans Length = 421

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 94  RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP-GFPYYEARAT 152
           +A+ D+  ++  Y +  +D+    G   AI + L   +  G  +L+  P  +P+      
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRL 162
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
           + H  V +   +    +E+D + +E  + D N    ++ +P NP G V+    L KIAE 
Sbjct: 163 NDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAEL 222
Query: 212 AKKLGIMVIADEVYDHLA-FGNT 233
            KK G+++++DE++  LA FGNT
Sbjct: 223 CKKHGVILVSDEIHQDLALFGNT 245

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 104/257 (40%), Gaps = 26/257 (10%)
Query: 33  NSLLENLNKNDTRPLIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
           + + E L   +T  +I L  G   P  FP      +AV+ +      A    Y +T G  
Sbjct: 29  SEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKAL--QYGTTKGFT 86
Query: 91  PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP-------G 143
           P R A+A ++ +     +S  ++    G  QA+++I  V   PG  I++  P        
Sbjct: 87  PLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQA 146
Query: 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT-----VALVIINPGNPCGN 198
           F YY+       L+         KG  VDL   +            +   +    NP G 
Sbjct: 147 FKYYDPEFISIPLD--------DKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGV 198
Query: 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258
             +    +K+ E A +   +++ D  Y  L +   P  P+  F     V+ LG+ SK  +
Sbjct: 199 TMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-IL 257
Query: 259 VPGWRLGWLVTSDPNGI 275
            PG+R+GW V + P+ I
Sbjct: 258 APGFRIGW-VAAHPHLI 273

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 24/261 (9%)
Query: 33  NSLLENLNKNDTRPLIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
           + + E L   +T  +I L  G  +P  FP      + V+ +      A    Y +T G  
Sbjct: 19  SEVRELLKLVETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKAL--QYGTTKGFT 76
Query: 91  PARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRP------- 142
           P R  +  +L +   Y +S D D+ +T G  QA+++I  V   PG  +++  P       
Sbjct: 77  PLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ 134
Query: 143 GFPYYEARATHSHL--EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
            F +YE +     L  E    ++L  K     L  +++   +  V   +    NP G   
Sbjct: 135 AFNFYEPQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVPTFQNPAGVTM 189
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260
                + + E A +   +V+ D+ Y  L +   P   +    +   V+ LG+ SK  + P
Sbjct: 190 NEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAP 248
Query: 261 GWRLGWLVTSDPNGILQDSGI 281
           G+R+GW+V  DP GI++   I
Sbjct: 249 GFRIGWMV-GDP-GIIRKMEI 267

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 47  LIPLGHGDP--SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           LI L  GDP     P      +A + +    +S     Y+   GI   R  +A +L +  
Sbjct: 36  LISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSV---MYTPANGIPELREELAAFLKKYD 92
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
             ++SP+++ +T+G T A++++  VL  PG  ++   P   Y         L  +  + +
Sbjct: 93  HLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPS--YINTLLAFEQLGAK-IEGV 149
Query: 165 PA--KGWEVDL--DAVEAL-ADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGI 217
           P    G  VDL  + ++ L A    V L+   P   NP G   + +  + + E A K  +
Sbjct: 150 PVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDL 209
Query: 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
           ++I D  Y+ + +     VP+    +   V+  G++SK  +  G+R+GW++  
Sbjct: 210 LIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSK-VLGTGFRIGWIIAE 261

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167
           + P+ +  T G T A  ++L  L  PG +++   P +            EV  + +    
Sbjct: 79  VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEEN 138
Query: 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
           GW  DL+ +  L    T  + I N  NP G V    +L+++ E A ++G  +++DEVY  
Sbjct: 139 GWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVGAYILSDEVYRS 198
Query: 228 LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP-NGILQD-------- 278
            +  + P + + V+   + V    S+S  + +PG R+GW+  +     IL+D        
Sbjct: 199 FSELDVPSI-IEVYDKGIAV---NSLSXTYSLPGIRIGWVAANHQVTDILRDYRDYTXIC 254
Query: 279 SGIVDSIKSFLNISSDPATFIQFLKSSRKL 308
           +G+ D + + L +    A + + L+ +R +
Sbjct: 255 AGVFDDLVAQLAL----AHYQEILERNRHI 280

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPR 141
           YS++ GI   RRAI+ +       ++ P+ +  +T+G  + +  ++      G  IL+P 
Sbjct: 71  YSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPN 130
Query: 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201
           P +P +   A  +  +VR   L+P   +  +L+     +      +++  P NP      
Sbjct: 131 PSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVE 190
Query: 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIV 259
               +++   AK+  +MV+ D  Y  + +     P + M V G+    +   ++SK + +
Sbjct: 191 LDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSI-MQVPGAKDIAVEFFTLSKSYNM 249
Query: 260 PGWRLGWLV 268
            GWR+G++V
Sbjct: 250 AGWRIGFMV 258

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR--DLP 105
           +PL  G+P   P+ +  + A+ A +H +       Y  T G+   R+A A++L R  D  
Sbjct: 33  VPLHIGEPK-HPTPKVITDALTASLHELEK-----YPLTAGLPELRQACANWLKRRYDGL 86
Query: 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGAN-----ILLPRPGFPYYEARATHSHLEVRH 160
              + +++   LG  +A+   +  +  P ++     I+ P P +  YE        E+ H
Sbjct: 87  TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEI-H 145
Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
           F   PA  +  D  ++     + T  + + +P NP G+V      +++ +   K G ++ 
Sbjct: 146 FANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIA 205
Query: 221 ADEVYDHLAF-GNTPFVPMGVFGSI----VPVLTLGSISKRWIVPGWRLGWL 267
           +DE Y  + F GN P   +     +      +L   S+S R  VPG R G++
Sbjct: 206 SDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFV 257

>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus Anginosus: Internal Aldimine Form Length = 392

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 10/191 (5%)
Query: 94  RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH 153
           +A+ D+   +  Y    +D+    G   AI + +    + G  +L+  P +P +      
Sbjct: 73  QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 154 SHLEVRHFDLLPAKG-WEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAET 211
           ++ ++    L    G +++D + +E    EN V L ++ NP NP G V+  + L++I   
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGW 266
            +K  +++++DE++  L       V    F ++ P      L L S +K + + G +  +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 267 LVTSDPNGILQ 277
            +  +P    Q
Sbjct: 250 AIIENPTLCAQ 260

>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C. 2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus Ncfm At 2.15 A Resolution Length = 533

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 75  VRSARFNCYSSTVGILPARRAIADYLNRDLPYK----LSPDDVYLTLGCTQAIEVILTVL 130
           V  A  N Y      L     I +Y  ++L YK        D++ T G T AI      L
Sbjct: 125 VNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSL 184
Query: 131 A-----RPGANILLPRPGFPYYEARATHSHLEVRHFDL--LPAKGWEVDLDAVEALADEN 183
           A     + G  I +  P F  Y         E+   DL       WE++ + +E L D +
Sbjct: 185 AENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPS 244
Query: 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVP-MGVF 241
             AL+++NP NP    +    L  I +  +K   + +I+DEVY         FVP     
Sbjct: 245 IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVY-------GAFVPNFKSI 297
Query: 242 GSIVPVLT--LGSISKRWIVPGWRLGWLVTSDPN 273
            S+VP  T  + S S  +   GWRLG +  ++ N
Sbjct: 298 YSVVPYNTXLVYSYSXLFGCTGWRLGVIALNEKN 331

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 15/192 (7%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
           YS T G  P R  +A+++       + P++V +T G  QA++++  V    G+ +LL  P
Sbjct: 70  YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG--NPCGNVY 200
               Y        L+   F  +PA     DLDA+E +        + + P   NP G + 
Sbjct: 124 S---YMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT---PFVPMGVFGSIVPVLTLGSISKRW 257
                +++ +   + G++V+ D+ Y  L FG         +        V+ LGS SK  
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 258 IVPGWRLGWLVT 269
           + PG R+ + V 
Sbjct: 240 LSPGLRVAFAVA 251

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 24/247 (9%)
Query: 88  GILPARRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP 145
           G+   R+AIA ++   R    +  P+ V +  G T A E I+  LA PG   L+P P +P
Sbjct: 84  GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 146 YYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADENTV-------ALVIINPGNPCG 197
            +       + +++       +  +++   AV+  A EN          L++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKE-AYENAQKSNIKVKGLILTNPSNPLG 202
Query: 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG--------VFGSIVPVLT 249
                  L+ +     +  I ++ DE+Y    F    FV +          + +   V  
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK 309
           + S+SK   +PG+R+G + + + + +         + SF  +S+    F+  + S  K  
Sbjct: 263 VYSLSKDMGLPGFRVGIIYSFNDDVV----NCARKMSSFGLVSTQTQYFLAAMLSDEKFV 318
Query: 310 RNSFLKS 316
            N FL+ 
Sbjct: 319 DN-FLRE 324

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R+ +AD+      Y+L  +++  T G  + IE++  VL     N +   P F  Y   A 
Sbjct: 73  RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
               EVR   LL  +  E DL+      DE T  + I NP NP GN      +Q   +  
Sbjct: 127 IEGAEVREIPLL--QDGEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 213 KKLGIMVIADEVY 225
               ++V+ DE Y
Sbjct: 185 PS-DVLVVLDEAY 196

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 26/249 (10%)
Query: 47  LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
           +I LG GD +   P   T+++A  A  H + +   ++ Y +  G  P R AIA      L
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
              +  DDV+++ G    I   L V+      I +  P +P Y   +             
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
             +  + +    P  G+  DL  V       T  +   +P NP G   T + L ++ E A
Sbjct: 173 QKYGNIEYMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           KK G +++ D  Y      + P     + G+    +   S SK     G RLGW V   P
Sbjct: 228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
             +L   G 
Sbjct: 286 KKLLYSDGF 294

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 22/249 (8%)
Query: 36  LENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARR 94
           LE++ K+    LI LG GD +  P     +  +    H + +   +  Y    G    R+
Sbjct: 61  LEHIEKHPNVQLISLGTGDTTE-PIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRK 119
Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE------ 148
           AIA+   RDL  K   ++V+++ G    I   L +L      I +  P FP Y       
Sbjct: 120 AIAETFYRDLHVK--SNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAYIDSSVII 176
Query: 149 ARATHSHLEVRHFDLL------PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
            +  H H + + +  +      P   +  DL          T  +   +P NP G V + 
Sbjct: 177 GQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTP-----RTDVIFFCSPNNPTGYVASR 231
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262
           + L ++ + AK  G ++I D  Y       +P     + G+    + + S SK     G 
Sbjct: 232 KQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGV 291
Query: 263 RLGWLVTSD 271
           RLGW +  D
Sbjct: 292 RLGWSIIPD 300

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 83/206 (40%), Gaps = 9/206 (4%)
Query: 67  AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126
           AV+A+  S+ +     Y+  +G+   R+ IA          L P  V +T G +    + 
Sbjct: 49  AVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLA 107
Query: 127 LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTV 185
            T L   G  + +  PG+P Y  R     L +   DL  A   E  L  V A  A  +  
Sbjct: 108 FTALFDSGDRVGIGAPGYPSY--RQILRALGLVPVDLPTAP--ENRLQPVPADFAGLDLA 163
Query: 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
            L + +P NP G    +     + E A+  G   I+DE+Y  + +       + +     
Sbjct: 164 GLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE-- 221
Query: 246 PVLTLGSISKRWIVPGWRLGWLVTSD 271
               + S SK +   GWR+GW V  +
Sbjct: 222 -CYVINSFSKYFSXTGWRVGWXVVPE 246

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 26/249 (10%)
Query: 47  LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
           +I LG GD +   P   T+++A  A  H + +   ++ Y +  G  P R AIA      L
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
              +  DDV+++ G    I   L V+      I +  P +P Y   +             
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
             +  + +    P  G+  DL  V       T  +   +P NP G   T + L ++ E A
Sbjct: 173 QKYGNIEYMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           KK G +++ D  Y      + P     + G+    +   S S+     G RLGW V   P
Sbjct: 228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
             +L   G 
Sbjct: 286 KKLLYSDGF 294

>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A Modulator In Mal Gene Expression Length = 390

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 166 AKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
           A GW  D+  +EA LA      +++ +P NP G V+T   L+ +A+  ++ G+ VI+DE+
Sbjct: 144 ADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEI 203
Query: 225 YDHLAFGNTPFVP 237
           +  + +G  P +P
Sbjct: 204 HMDMVWGEQPHIP 216

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 96/249 (38%), Gaps = 26/249 (10%)
Query: 47  LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
           +I LG GD +   P   T+++A  A  H + +   ++ Y +  G  P R AIA      L
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
              +  DDV+++ G    I   L V+      I +  P +P Y   +             
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
             +  + +    P  G+  DL  V       T  +   +P NP G   T + L ++ E A
Sbjct: 173 QKYGNIEYMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           KK G +++ D  Y      + P     + G+    +   S S      G RLGW V   P
Sbjct: 228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
             +L   G 
Sbjct: 286 KKLLYSDGF 294

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 44  TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRD 103
           T  L+P+   D      F+ A   +D++ + +       Y  T        +I ++L R 
Sbjct: 31  TNDLLPMWVADMD----FKAAPCIIDSLKNRLEQE---IYGYTTRPDSYNESIVNWLYRR 83
Query: 104 LPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE--VRHF 161
             +K+  + +  + G   AI +++  L +    I++  P +  + +   +++ E  +   
Sbjct: 84  HNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPL 143
Query: 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221
             L    + +D + +E    ++    ++ NP NP G V+T   L+K+ +   K  + +I+
Sbjct: 144 QKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIIS 202
Query: 222 DEVYDHLAFGNTPFVPMG 239
           DE++  +       +PM 
Sbjct: 203 DEIHSDIILKKHKHIPMA 220

>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola Contains A Pyridoxal 5'-Phosphate Cofactor Length = 399

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP-GFPYYEARA 151
           ++ +  ++     + +  D +  T G   A+   +    +PG  +++  P  +P++ A  
Sbjct: 72  KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMA-I 130
Query: 152 THSHLEVRHFDLLPAKGW-EVDLDAVEALA-DENTVALVIINPGNPCGNVYTYQHLQKIA 209
            +   ++   +LL   G+  +D   +E L+ D+N  AL+  +P NP G V+    LQKI 
Sbjct: 131 KNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIK 190
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL-----TLGSISKRWIVPGWRL 264
           +   K  +M+ +DE++  L     P     VF SI   L     T  + SK + + G  +
Sbjct: 191 DIVLKSDLMLWSDEIHFDLIM---PGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM 247
Query: 265 GWLVTSDPN 273
             ++  +P+
Sbjct: 248 SNIIIKNPD 256

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 94/249 (37%), Gaps = 26/249 (10%)
Query: 47  LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
           +I LG GD +   P   T++ A  A  H + +   ++ Y +  G  P R AIA      L
Sbjct: 58  VISLGIGDTTEPIPEVITSAXAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
              +  DDV+++ G    I   L V       I +  P +P Y   +             
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
             +  + +    P  G+  DL  V       T  +   +P NP G   T + L ++ E A
Sbjct: 173 QKYGNIEYXRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           KK G +++ D  Y      + P     + G+        S SK     G RLGW V   P
Sbjct: 228 KKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
             +L   G 
Sbjct: 286 KKLLYSDGF 294

>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium Diphtheriae At 1.99 A Resolution Length = 377

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/242 (21%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 36  LENLNKNDTRPLIPLGHGDPS---AFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA 92
           +E+L   +T      G G      A   F T    + AI  +V+   F  Y     +L  
Sbjct: 7   IEDLRARNTXKWTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFG-YQPDGSLL-- 63
Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
            +A A++      Y+  P+ ++      + + + +       + +++P P +P +    +
Sbjct: 64  SQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLS 123
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
            +  E    D   A G  ++L  VE        ++++ NP NP G V+  + L ++ + A
Sbjct: 124 ATQREGIFID---ATG-GINLHDVEKGFQAGARSILLCNPYNPLGXVFAPEWLNELCDLA 179
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV-LTLGSISKRWIVPGWRLGWLVTSD 271
            +    V+ DE++  L F     V  GV  +   V +T+ + S  W + G +   ++ S+
Sbjct: 180 HRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWNIAGLKCAQIIFSN 239
Query: 272 PN 273
           P+
Sbjct: 240 PS 241

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176
           +G  + +  +L  L  P   +LLP   +P Y   A  + L  R F +   +    DL AV
Sbjct: 94  IGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASL--RTFLIPLREDGLADLKAV 151
Query: 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPF 235
                     L++  P NP G V  + + ++    A+K G+ +I D  Y D +  G  P 
Sbjct: 152 PEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAP- 210
Query: 236 VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
            P+ + G+   V+ L S+SK + + G+RLG+ + S+
Sbjct: 211 SPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 32/250 (12%)
Query: 50  LGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS 109
           LG G+P     F T     DA+ +   S   N Y  +      R A   +  R    +L 
Sbjct: 28  LGIGEPQ----FETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIELK 81
Query: 110 PDDVYLTLGCTQAI----EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
            +++  TLG  + +      +L     P   I  P P +  YE  A      ++   LL 
Sbjct: 82  ENELISTLGSREVLFNFPSFVLFDYQNP--TIAYPNPFYQIYEGAAKF----IKAKSLLX 135
Query: 166 AKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
               E D        +   V LVI+N P NP G   + + L    + A K   ++I DE 
Sbjct: 136 PLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 225 YDHLAFGNTP------FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278
           Y  + + NTP         +    +   VL + S+SKR   PG R G+        I  D
Sbjct: 196 YSEI-YENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGF--------IAGD 246
Query: 279 SGIVDSIKSF 288
           S +++  K+F
Sbjct: 247 SRLLEKYKAF 256

>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent Aminotransferase (Lbul_1103) From Lactobacillus Delbrueckii Subsp. At 1.61 A Resolution Length = 391

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 94  RAIADYLNRDLPYKLSPDDVYLTL--GCTQAIEVILTVLARPGANILLPRPGFPYYEARA 151
           +A+AD+   ++ ++  P + +     G   AI   +     PG  IL+  P +  + +  
Sbjct: 69  KAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVI 126
Query: 152 THSHLEVRHFDLLPAKG-WEVDL-DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209
             +   V   DL+     + V+  D  E LA  +    V  NP NP G  ++ + +++IA
Sbjct: 127 EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIA 186
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259
           E   K  +++I+DE++  L   +           I P  T+   +K W+V
Sbjct: 187 ELCAKHQVLLISDEIHGDLVLTDE---------DITPAFTVDWDAKNWVV 227

>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta (Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A Resolution Length = 417

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 31/271 (11%)
Query: 18  EELKTASGITVRGVLNSLLENLNKNDTRP-LIPLGHGDPSAFPSFRTA-SVAVDAIVHSV 75
           ++    SGIT       L E+LN     P  I LG G+P+  P+ +      +   V S 
Sbjct: 9   DKFTRHSGIT------RLXEDLNDGLRTPGAIXLGGGNPAHIPAXQDYFQTLLTDXVESG 62
Query: 76  RSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG 134
           ++A   C Y    G      A+A  L   L + + P ++ LT G   A   +  + A   
Sbjct: 63  KAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRR 122
Query: 135 AN-----ILLP-RPGFPYYEARATHSHLEVR---HFDLLPAKGWEVDLDAVEALADENTV 185
           A+     +L P  P +  Y        L V    + +LLP   ++  +D       E T 
Sbjct: 123 ADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETG 182
Query: 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
            + +  P NP GNV T + L K+   A +  I ++ D  Y        PF P  +F    
Sbjct: 183 XICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAY------GVPF-PGIIFSEAR 235
Query: 246 P-----VLTLGSISKRWIVPGWRLGWLVTSD 271
           P     ++   S+SK  + PG R G ++ +D
Sbjct: 236 PLWNPNIILCXSLSKLGL-PGSRCGIIIAND 265

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
           + P+ V ++ G  + IE+++     PG + IL   P +  Y   A    +E R    L  
Sbjct: 73  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL-- 130
Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
             W++DL  +    D   V  V  +P NP G +   Q  + + E  +   I V+ADE Y 
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYVC-SPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 227 HLAFGNTPFVPMGVFGSIVPVLT-LGSISKRWIVPGWRLGWLVTSD 271
                  P   +  + +  P L  L ++SK + + G R G+ + ++
Sbjct: 189 EFC----PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
           + P+ V ++ G  + IE+++     PG + IL   P +  Y   A    +E R    L  
Sbjct: 73  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTL-- 130
Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
             W++DL  +    D   V  V  +P NP G +   Q  + + E  +   I V+ADE Y 
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYVC-SPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 227 HLAFGNTPFVPMGVFGSIVPVLT-LGSISKRWIVPGWRLGWLVTSD 271
                  P   +  + +  P L  L ++SK + + G R G+ + ++
Sbjct: 189 EFC----PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG-WE 170
           +V L  G  + I  +    ARPGA +  P PGF  Y   A  + LE   F  +P +  + 
Sbjct: 87  EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLE---FVGVPLRADFT 143
Query: 171 VDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDH 227
           +D  A  A   E+  A+V +  P NP GN++     + I   A+      +V+ DE Y  
Sbjct: 144 LDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQP 203
Query: 228 LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287
            A   +    +  FG++   L   ++SK  +  G RLG+ V  DP  + Q    +D ++ 
Sbjct: 204 FA-QESWXSRLTDFGNL---LVXRTVSKLGLA-GIRLGY-VAGDPQWLEQ----LDKVRP 253
Query: 288 FLNIS 292
             N++
Sbjct: 254 PYNVN 258

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
           +DL  +E          +  NP NP G VY+ + + +IA  A + G  VIAD++Y  L +
Sbjct: 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRY 226
Query: 231 GNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLG 265
               +  +    ++    V+T+   S    + G+RLG
Sbjct: 227 AGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 36/213 (16%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           D+ +T G  Q +  +  ++  PG N+LL  P +       T   L     +++     E 
Sbjct: 110 DLCVTSGSQQGLXKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            +               DA     +       + N  NP GN  T +  ++I E A+K  
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAF--GNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
            ++I D+ Y  L F  G  P F+ M V G ++   +   I    I  G R+G+L    P 
Sbjct: 225 FLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQFLKSS 305
                  +++ +   + +S+  P+TF Q + S 
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQ 305

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 18/195 (9%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKL-SPDDVYLTLGCTQAIEVILTVLARPGANILLPR 141
           Y +  G    ++AI D+  R     L   D+V +  G    +  + T +  PG  +LLP 
Sbjct: 81  YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPD 140
Query: 142 PGFPYY-------EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGN 194
           PG+  Y       + +    +LE  H+  LP      D   V++   + T  + +  P N
Sbjct: 141 PGYTDYLAGVLLADGKPVPLNLEPPHY--LP------DWSKVDSQIIDKTKLIYLTYPNN 192
Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSI 253
           P G+  T +   +     K     ++ D  Y    F    P +     G  V  + + S+
Sbjct: 193 PTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV-AIEIYSL 251
Query: 254 SKRWIVPGWRLGWLV 268
           SK +   G+R+G+ V
Sbjct: 252 SKGYNXSGFRVGFAV 266

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 36/213 (16%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           D+ +T G  Q +  +  ++  PG N+LL  P +       T   L     +++     E 
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            +               DA     +       + N  NP GN  T +  ++I E A+K  
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAF--GNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
            ++I D+ Y  L F  G  P F+ M V G ++   +   I    I  G R+G+L    P 
Sbjct: 225 FLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQFLKSS 305
                  +++ +   + +S+  P+TF Q + S 
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQ 305

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R  +A Y+ +     ++ D+++   G  + ++ +L     PG   L  +P +  +   A 
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 153 HSHLEVRHFDLLPAKG--WEVDLD-AVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209
            +H E     +  ++G  + +D+D A+E +  +    + +  P NP G+V +   +++I 
Sbjct: 135 GTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERII 190
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269
             A  +   VI DE Y    F  +P     +      ++   ++SK +   G RLG+ V 
Sbjct: 191 NVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA 245
Query: 270 S 270
           +
Sbjct: 246 N 246

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 100 LNRDLPYKLSPDDVYLTLG--CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE 157
           LN+ +   L   D+ + LG   ++ IE+ +++  +    IL+  P +  YE  A    + 
Sbjct: 66  LNKSIENYLKLKDIGIVLGNGASEIIELSISLFEK----ILIIVPSYAEYEINAKKHGVS 121
Query: 158 V--RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG---NVYTYQHLQKIAETA 212
           V   + D      +E   D +  + D ++V  +I NP NP G   N   + H+ K+AE  
Sbjct: 122 VVFSYLDENMCIDYE---DIISKIDDVDSV--IIGNPNNPNGGLINKEKFIHVLKLAEEK 176
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           KK    +I DE +     G+     +G   +   +  + +++K + +PG R G+ +T++ 
Sbjct: 177 KK---TIIIDEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK 232

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R  +A Y+ +     ++ D+++   G  + ++ +L     PG   L  +P +  +   A 
Sbjct: 72  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 153 HSHLEVRHFDLLPAKGWEVDLD-AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
            +H E     +     + +D+D A+E +  +    + +  P NP G+V +   +++I   
Sbjct: 132 GTHTEF--IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 189
Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
           A  +   VI DE Y    F  +P     +      ++   ++SK +   G RLG+ V +
Sbjct: 190 APGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 243

>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase (Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50 A Resolution Length = 444

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 27/170 (15%)
Query: 83  YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN------ 136
           YS+  G      A+  + NR   + L+ +++ LT G   A   +  +      N      
Sbjct: 79  YSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDK 138
Query: 137 --------ILLPRP----GFPYYEARATHSHLEVRHFDLLPAKGWE------VDLDAVE- 177
                   ILLP      G+        H    + H D +   G E      VD +A+E 
Sbjct: 139 ESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALEN 198
Query: 178 --ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
             AL +    A+    P NP GNV T +    +AE AK+  I +I D  Y
Sbjct: 199 LPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 36/213 (16%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           D+ +T G  Q +  +  ++  PG N+LL  P +       T   L     +++     E 
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            +               DA     +       + N  NP GN  T +  ++I E A+K  
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
            ++I D+ Y  L F       F+ M V G ++   +   I    I  G R+G+L    P 
Sbjct: 225 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQFLKSS 305
                  +++ +   + +S+  P+TF Q + S 
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQ 305

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 36/213 (16%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           D+ +T G  Q +  +  ++  PG N+LL  P +       T   L     +++     E 
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            +               DA     +       + N  NP GN  T +  ++I E A+K  
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
            ++I D+ Y  L F       F+ M V G ++   +   I    I  G R+G+L    P 
Sbjct: 225 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQFLKSS 305
                  +++ +   + +S+  P+TF Q + S 
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQ 305

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 36/213 (16%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           D+ +T G  Q +  +  ++  PG N+LL  P +       T   L     +++     E 
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            +               DA     +       + N  NP GN  T +  ++I E A+K  
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
            ++I D+ Y  L F       F+ M V G ++   +   I    I  G R+G+L    P 
Sbjct: 225 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQFLKSS 305
                  +++ +   + +S+  P+TF Q + S 
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQ 305

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 36/213 (16%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           D+ +T G  Q +  +  ++  PG N+LL  P +       T   L     +++     E 
Sbjct: 112 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 166
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            +               DA     +       + N  NP GN  T +  ++I E A+K  
Sbjct: 167 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 226
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
            ++I D+ Y  L F       F+ M V G ++   +   I    I  G R+G+L    P 
Sbjct: 227 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP- 281
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQFLKSS 305
                  +++ +   + +S+  P+TF Q + S 
Sbjct: 282 -------LIERVILHIQVSTLHPSTFNQLMISQ 307

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 36/213 (16%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
           D+ +T G  Q +  +  ++  PG N+LL  P +       T   L     +++     E 
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            +               DA     +       + N  NP GN  T +  ++I E A+K  
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
            ++I D+ Y  L F       F+ M V G ++   +   I    I  G R+G+L    P 
Sbjct: 225 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQFLKSS 305
                  +++ +   + +S+  P+TF Q + S 
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQ 305

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R  +A Y+ +     ++ D+++   G  + ++ +L     PG   L  +P +  +   A 
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 153 HSHLEVRHFDLLPAKG--WEVDLD-AVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209
            +H E     +  ++G  + +D+D A+E +  +    + +  P NP G+V +   +++I 
Sbjct: 135 GTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERII 190
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269
             A  +   VI DE Y    F  +P     +      ++   ++S  +   G RLG+ V 
Sbjct: 191 NVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVA 245
Query: 270 S 270
           +
Sbjct: 246 N 246

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-123
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	1e-113
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	5e-51
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	1e-44
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	1e-44
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	2e-44
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	5e-42
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-41
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	2e-41
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	9e-41
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	9e-41
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	2e-40
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	5e-40
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	5e-39
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	5e-39
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	5e-37
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	1e-35
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	2e-35
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	3e-34
3ele_A	398	Amino transferase; RER070207001803, structural gen	3e-34
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	6e-34
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	2e-33
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	8e-33
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	4e-32
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	4e-32
3nra_A	407	Aspartate aminotransferase; structural genomics, j	7e-32
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	9e-32
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	6e-31
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	2e-30
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	6e-30
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	1e-29
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	9e-28
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	1e-27
1vp4_A	425	Aminotransferase, putative; structural genomics, j	2e-27
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	4e-27
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	6e-27
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	6e-27
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	1e-26
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	2e-26
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	2e-25
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	1e-24
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	3e-24
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	2e-23
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	5e-22
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	7e-22
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	2e-21
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	3e-21
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	3e-20
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	3e-20
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	7e-20
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	4e-19
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	6e-19
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	9e-19
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	9e-19
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	2e-18
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	2e-18
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	2e-18
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	1e-17
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	3e-17
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	1e-16
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	2e-16
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	5e-16
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	3e-14
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	2e-13
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	7e-12
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	9e-11
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	3e-10
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	1e-09
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	7e-06
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	7e-06
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	2e-05
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	2e-04
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	3e-04
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	4e-04
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	5e-04
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  358 bits (921), Expect = e-123
 Identities = 106/293 (36%), Positives = 167/293 (56%), Gaps = 7/293 (2%)

Query: 10  NQWGFKANEELK-TASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAV 68
           + W  + ++  K T + I  R +++++      N  + +I L  GDP+ F +  T     
Sbjct: 22  SMWSVRPSDMAKKTFNPI--RAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVT 77

Query: 69  DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILT 128
            A+  ++ S ++N Y+ ++G L +R  IA Y +      L   DV LT GC+QAI++ L 
Sbjct: 78  QAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLA 136

Query: 129 VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188
           VLA PG NIL+PRPGF  Y+  A    +EV+ ++LLP K WE+DL  +E L DE T  L+
Sbjct: 137 VLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLI 196

Query: 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL 248
           + NP NPCG+V++ +HLQKI   A +  + ++ADE+Y  + F +  + P+    + VP+L
Sbjct: 197 VNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPIL 256

Query: 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQF 301
           + G ++KRW+VPGWRLGW++  D   I  +  I D +         P T +Q 
Sbjct: 257 SCGGLAKRWLVPGWRLGWILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQG 308

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  333 bits (857), Expect = e-113
 Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 18/303 (5%)

Query: 10  NQWGFKANEELK-TASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAV 68
           + W    +       + I  R V ++          +P+I L  GDP+   +  T++  +
Sbjct: 2   SSWDVSMSNHAGLVFNPI--RTVSDNAKP---SPSPKPIIKLSVGDPTLDKNLLTSAAQI 56

Query: 69  DAIVHSVRSARFNCYSSTVGILPARRAIADYLNR------DLPYKLSPDDVYLTLGCTQA 122
             +  ++ S   N Y  TVG   AR A+A +         +L   +  D+V L  G +  
Sbjct: 57  KKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHG 116

Query: 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE 182
           I + +T +   G   L+P+PGFP+YE       + +  ++  P   WE DLD +  L D+
Sbjct: 117 ILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD 176

Query: 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG----NTPFVPM 238
            T  L++ NP NPCG+ ++ +H++ I   A++L + + +DE+Y  + F     N  F  +
Sbjct: 177 KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSV 236

Query: 239 GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATF 298
             F + VP + LG  +K  +VPGWRLGWL+  DP+G       ++ +K    +   P T 
Sbjct: 237 ADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPS--FLEGLKRVGMLVCGPCTV 294

Query: 299 IQF 301
           +Q 
Sbjct: 295 VQA 297

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  172 bits (439), Expect = 5e-51
 Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 5/254 (1%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           I L  GDP  F  F+      +A   +++    N Y  + G+   R+AI +   R     
Sbjct: 41  IRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKNGVD 98

Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167
           ++PDDV +T   T+A+++I   L  PG  IL+P P +P Y         +   +  +  +
Sbjct: 99  ITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEE 158

Query: 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
            W+ D+D +     + T A+ +INP NP G +Y  + L++I   A +  I VI+DE+YD 
Sbjct: 159 DWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDL 218

Query: 228 LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287
           + +     +  G     VPV+ +  +SK +   GWRLG++   DP   L +  + ++I  
Sbjct: 219 MTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE--VREAIDR 275

Query: 288 FLNISSDPATFIQF 301
              I   P T  QF
Sbjct: 276 LARIRLCPNTPAQF 289

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  156 bits (397), Expect = 1e-44
 Identities = 50/260 (19%), Positives = 89/260 (34%), Gaps = 19/260 (7%)

Query: 24  SGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY 83
           + I  R ++  L+ NL K        +  G P          + ++  +  +R    + Y
Sbjct: 26  ASI--RDLVA-LVTNLEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIY 78

Query: 84  SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----PGANILL 139
            +  G+   ++  + +    +   +       T+G  Q   V   V  R         L 
Sbjct: 79  PNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLF 138

Query: 140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199
             PGF   + +      +   FDL   +G ++       L      +++  NP NP    
Sbjct: 139 IDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQC 198

Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-------VLTLGS 252
            T + L+ I E A K  ++VI D  Y  + F    +   G               +   S
Sbjct: 199 MTDEELRIIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALS 257

Query: 253 ISKRWIVPGWRLGWLVTSDP 272
            SK +   G R+G L+ S  
Sbjct: 258 SSKAFSYAGQRIGVLMISGK 277

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  158 bits (400), Expect = 1e-44
 Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 26/265 (9%)

Query: 59  PSFRT-ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLN-RDLPYKLSPDDVYLT 116
           PSF   A      I+ +        YS++ G+   R  +A Y+  RD      PD++YLT
Sbjct: 100 PSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLT 159

Query: 117 LGCTQAIEVILTVLARPG----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172
            G +  I  IL +L   G      +++P P +P Y A  +       ++ L     W ++
Sbjct: 160 TGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALN 219

Query: 173 LDAVEALADENTV-----ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
           ++ +     E         L IINPGNP G V + + ++ +   A +  + ++ADEVY  
Sbjct: 220 VNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD 279

Query: 228 LAF-GNTPFVPM--------GVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQ 277
             +  +  F             + S V + +  S SK ++   G+R G++   +      
Sbjct: 280 NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINL----- 334

Query: 278 DSGIVDSIKSFLNISSDPATFIQFL 302
              I   +   L++   P    Q  
Sbjct: 335 HPEIKGQLVKLLSVRLCPPVSGQAA 359

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  157 bits (398), Expect = 2e-44
 Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 21/248 (8%)

Query: 70  AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTV 129
            I+  +       YS + GI   R AIA  +     +  + DD++LT G +  + +++ +
Sbjct: 117 QILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQL 176

Query: 130 LAR-PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------ 182
           L R     IL+P P +P Y A        +  + L  + GW ++   V+   ++      
Sbjct: 177 LIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGI 236

Query: 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFV----- 236
           N  ALV+INPGNP G V   ++   I +  K  G++++ADEVY    +  N  F      
Sbjct: 237 NVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKI 296

Query: 237 --PMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS 293
              +G     +P+++  S+SK +    G R G+   +        + + + I    +++ 
Sbjct: 297 VRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGF-----SAPVREQIYKIASVNL 351

Query: 294 DPATFIQF 301
                 Q 
Sbjct: 352 CSNITGQI 359

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  148 bits (377), Expect = 5e-42
 Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 11/224 (4%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           R +I +  G P           AV+A+  S+ +     Y+  +G+   R+ IA       
Sbjct: 31  RRIIHMEVGQPG----TGAPRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWY 85

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
              L P  V +T G +    +  T L   G  + +  PG+P Y        L        
Sbjct: 86  GVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTA 145

Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
           P    +        L   +   L++ +P NP G +  +  +  + E A+  G   I+DE+
Sbjct: 146 PENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEI 202

Query: 225 YDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           Y  + +       + +         + S SK + + GWR+GW+V
Sbjct: 203 YHGIEYEAKAVTALELTDECY---VINSFSKYFSMTGWRVGWMV 243

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  147 bits (374), Expect = 2e-41
 Identities = 67/228 (29%), Positives = 100/228 (43%), Gaps = 16/228 (7%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           + LG G    FP        + A   ++     N Y    G  P RRAIA    R     
Sbjct: 28  VNLGQG----FPDEDGPPKMLQAAQDAIA-GGVNQYPPGPGSAPLRRAIAAQRRRHFGVD 82

Query: 108 LSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL-LP 165
             P+ +V +T+G T+AI   +  L  PG+ +LL  P +  Y      +        L   
Sbjct: 83  YDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPD 142

Query: 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
            +G+ +D DA+       T AL+I +P NP G V +   L  IAE A    ++VI DEVY
Sbjct: 143 GRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVY 202

Query: 226 DHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLV 268
           +HL F +   +P+  F           +T+ S +K +   GW++GW  
Sbjct: 203 EHLVFDHARHLPLAGF----DGMAERTITISSAAKMFNCTGWKIGWAC 246

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  146 bits (372), Expect = 2e-41
 Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 16/227 (7%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           I L  G    FP F       + + H V     N Y+   G+   R AIA    R   Y+
Sbjct: 33  INLSQG----FPDFDGPRYLQERLAHHVAQGA-NQYAPMTGVQALREAIAQKTERLYGYQ 87

Query: 108 LSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
              D D+ +T G T+A+   +T L R G  ++   P +  Y      S   V+   L P 
Sbjct: 88  PDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQP- 146

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
             + VD     AL  E T  +++  P NP   V+       + +      I VI+DEVY+
Sbjct: 147 PHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYE 206

Query: 227 HLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLV 268
           H+ F       +       P      + + S  K + + GW++G+ V
Sbjct: 207 HINFSQQGHASVLAH----PQLRERAVAVSSFGKTYHMTGWKVGYCV 249

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  145 bits (367), Expect = 9e-41
 Identities = 48/242 (19%), Positives = 98/242 (40%), Gaps = 17/242 (7%)

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
           F  +    +     ++  + N Y    G    +++++          + P+ +  T G T
Sbjct: 38  FALSGTNPEDFYKKLQGTKLN-YGWIEGSPAFKKSVSQLYTG-----VKPEQILQTNGAT 91

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
            A  ++L  L  PG +++   P +            EV  + +    GW  DL+ +  L 
Sbjct: 92  GANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI 151

Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
              T  + I N  NP G V    +L+++ E A ++G  +++DEVY   +  + P +   V
Sbjct: 152 RPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSII-EV 210

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
           +      + + S+SK + +PG R+GW+     + +      +   + +  I      F  
Sbjct: 211 YDK---GIAVNSLSKTYSLPGIRIGWVAA--NHQVTDI---LRDYRDYTMIC--AGVFDD 260

Query: 301 FL 302
            +
Sbjct: 261 LV 262

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  145 bits (367), Expect = 9e-41
 Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 19/224 (8%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           + LG G    FPS       ++A+  ++   R + Y+   G+   R A+A+    +    
Sbjct: 28  VNLGQG----FPSNPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEEFAVE---- 77

Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL-LPA 166
             P+ V +T G T+A+ V+L  L  PG  +++  P F  Y   A  +  + R   L L  
Sbjct: 78  --PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP 135

Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
           +G+ +DL A+E      T AL++  P NP G V+  + L+ IA  A+   + +I+DEVYD
Sbjct: 136 EGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYD 195

Query: 227 HLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLV 268
            L +G  P           P    T+GS  KR    G+R+GW+V
Sbjct: 196 ELYYGERPRRLR----EFAPERTFTVGSAGKRLEATGYRVGWIV 235

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  145 bits (369), Expect = 2e-40
 Identities = 68/310 (21%), Positives = 114/310 (36%), Gaps = 46/310 (14%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100
           KN  R LI LG G    F S+     A+     ++     N YS T G      ++    
Sbjct: 53  KNQGRELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLY 108

Query: 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH 160
           +     +L  ++V +T G  + I   L  L   G  +++  P F  Y         +V +
Sbjct: 109 SPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVY 168

Query: 161 FDLLP----------AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE 210
             + P           + W +D +  E      T A++I  P NP G V+T + L  +  
Sbjct: 169 VPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGN 228

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLG 265
              K  +++I+DEVY+HL F ++         ++ P      LT+GS  K +   GWR+G
Sbjct: 229 ICVKHNVVIISDEVYEHLYFTDSFTRIA----TLSPEIGQLTLTVGSAGKSFAATGWRIG 284

Query: 266 WLV-----------------TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL 308
           W++                        LQ++         +N +     F +  +     
Sbjct: 285 WVLSLNAELLSYAAKAHTRICFASPSPLQEACAN-----SINDALKIGYFEKMRQEYIN- 338

Query: 309 KRNSFLKSLT 318
           K   F     
Sbjct: 339 KFKIFTSIFD 348

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  143 bits (364), Expect = 5e-40
 Identities = 60/292 (20%), Positives = 110/292 (37%), Gaps = 36/292 (12%)

Query: 58  FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLT 116
           FP     S   + +  +      N Y+   G     +A++    +    ++ P+ ++ + 
Sbjct: 32  FPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVA 91

Query: 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK--------- 167
           +G   ++   +  L  PG  +++  P +  YE     +        L             
Sbjct: 92  VGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSS 151

Query: 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
            W  D   +E+     T A+++  P NP G VYT Q LQ IA+   K   + I+DEVY+ 
Sbjct: 152 DWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEW 211

Query: 228 LAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLVTSDP---------- 272
           L +     V +       P      +T+GS  K + V GW+LGW +              
Sbjct: 212 LVYTGHTHVKIATL----PGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQ 267

Query: 273 ------NGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKSLT 318
                    LQ + + ++    +    DP  +   L    ++KR+  ++ L 
Sbjct: 268 NSFYTCATPLQ-AALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLN 318

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  141 bits (358), Expect = 5e-39
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 24/237 (10%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLP 105
           + LG G    FP +     A++A+  +  S     N Y+   G     +A++   ++ + 
Sbjct: 40  LNLGQG----FPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVD 95

Query: 106 YKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
             ++P  +V +T+G  +A+   +      G  +++  P F  YE     +    R   L 
Sbjct: 96  RTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLK 155

Query: 165 PAKG--------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
           P K         W +D + +EAL +E T  ++I  P NP G V     L+ +A   KK  
Sbjct: 156 PNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWN 215

Query: 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLV 268
           ++ ++DEVY+H+ F     + +       P      +T+GS  K + + GW++GW  
Sbjct: 216 VLCVSDEVYEHMVFEPFEHIRICTL----PGMWERTITIGSAGKTFSLTGWKIGWAY 268

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  141 bits (357), Expect = 5e-39
 Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 42/304 (13%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRS-ARFNCYSSTVGILPARRAIADYLNRDLPY 106
           + LG G    FP F     AV+A  H+V      N Y+ T G  P  + +A +    L  
Sbjct: 31  VNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQ 86

Query: 107 KLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
           ++ P  +V +T+G   A+      L   G  +++  P F  YE     +        L P
Sbjct: 87  EIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKP 146

Query: 166 AK----------GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215
                        W++D   +       T ALV+  P NP G V++ + L+ +A   ++ 
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH 206

Query: 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLVTS 270
            ++ I DEVY  + +     + +       P      LT+GS  K +   GW++GW++  
Sbjct: 207 DVVCITDEVYQWMVYDGHQHISIASL----PGMWERTLTIGSAGKTFSATGWKVGWVLGP 262

Query: 271 DP----------------NGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314
           D                     Q   + +S +    +   P+++      + +  R+  +
Sbjct: 263 DHIMKHLRTVHQNSVFHCPTQSQA-AVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMI 321

Query: 315 KSLT 318
           +SL 
Sbjct: 322 RSLQ 325

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  135 bits (343), Expect = 5e-37
 Identities = 62/259 (23%), Positives = 95/259 (36%), Gaps = 23/259 (8%)

Query: 23  ASGITVRGVLNSLLENLNKNDTRP-LIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSAR 79
            SGIT       L+E+LN     P  I LG G             ++  D +     +  
Sbjct: 14  HSGIT------RLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADA 67

Query: 80  FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN--- 136
              Y    G      A+A  L   L + + P ++ LT G   A   +  + A   A+   
Sbjct: 68  LCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGST 127

Query: 137 ILLPRPGFPYYEARATHSHLEVRHF-------DLLPAKGWEVDLDAVEALADENTVALVI 189
             +  P  P Y      S LE   F       +LLP   ++  +D       E T  + +
Sbjct: 128 KKVLFPLAPEYIG-YADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICV 186

Query: 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249
             P NP GNV T + L K+   A +  I ++ D  Y    F    F       +   ++ 
Sbjct: 187 SRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVP-FPGIIFSEARPLWN-PNIIL 244

Query: 250 LGSISKRWIVPGWRLGWLV 268
             S+SK   +PG R G ++
Sbjct: 245 CMSLSK-LGLPGSRCGIII 262

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  132 bits (334), Expect = 1e-35
 Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 17/233 (7%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIAD 98
           K     +  L  G P      +T  V  + I       +     YS + GI   R A A 
Sbjct: 39  KKRGVRIHHLNIGQPD----LKTPEVFFERI----YENKPEVVYYSHSAGIWELREAFAS 90

Query: 99  YLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEV 158
           Y  R     + P++V +T G ++AI     V+A PG  IL+  P +  Y A A  + +++
Sbjct: 91  YYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKL 150

Query: 159 RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218
                   +G+ +    +E+  +E T  +V+ NP NP G VY    ++ + E A++ G+ 
Sbjct: 151 IPVTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLF 209

Query: 219 VIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLVT 269
           +I DEVY  + F       +    SI    V+ + S+SK++   G R+G L+T
Sbjct: 210 LIVDEVYSEIVFRGEFASAL----SIESDKVVVIDSVSKKFSACGARVGCLIT 258

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  132 bits (333), Expect = 2e-35
 Identities = 49/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-----YSSTVGILPARRAIADYLNR 102
           I +G  +           +  +           +      +    G+   R+AIA ++ +
Sbjct: 39  IQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEK 98

Query: 103 --DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVR 159
                 +  P+ V +  G T A E I+  LA PG   L+P P +P +       + +++ 
Sbjct: 99  TRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLI 158

Query: 160 HFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
                 +  +++   AV+   +           L++ NP NP G       L+ +     
Sbjct: 159 PIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTN 218

Query: 214 KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--------VLTLGSISKRWIVPGWRLG 265
           +  I ++ DE+Y    F    FV +                V  + S+SK   +PG+R+G
Sbjct: 219 QHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVG 278

Query: 266 WLVTSDPNGILQDSGIVDSIKSFLNISS 293
            + + + + +         + SF  +S+
Sbjct: 279 IIYSFNDDVV----NCARKMSSFGLVST 302

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  128 bits (325), Expect = 3e-34
 Identities = 57/271 (21%), Positives = 105/271 (38%), Gaps = 29/271 (10%)

Query: 48  IPLGHGDPSA---FPSFRTASVAVDAIVHSVRSARFN---CYSSTVGILPARRAIADYLN 101
           I +G  +            A     A       + F     +    G+   ++A+ D++ 
Sbjct: 41  IQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMA 100

Query: 102 --RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP-YYEARATHSHLEV 158
             R       P+ + LT G T A E  +  LA PG  +L+P P +P +       + +E+
Sbjct: 101 EIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEI 160

Query: 159 RHFDLLPAKGWEVDLDAVEA------LADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
                  + G+++   A+E         +     +++ NP NP G   T   L  +    
Sbjct: 161 VPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV 220

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP----------VLTLGSISKRWIVPGW 262
           +  GI +I+DE+Y   AF +  F+ +                  V  + S+SK   +PG+
Sbjct: 221 EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGF 280

Query: 263 RLGWLVTSDPNGILQDSGIVDSIKSFLNISS 293
           R+G + ++D   +         + SF  +SS
Sbjct: 281 RVGAIYSNDDMVV----AAATKMSSFGLVSS 307

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  128 bits (323), Expect = 3e-34
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 23/229 (10%)

Query: 59  PSFRTASVAVDAIVHSVR---SARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL 115
           PS     +  D I   V    S   + Y+S  G +  R AIA++LN       + D++Y+
Sbjct: 45  PSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYM 104

Query: 116 TLGCTQAIEVILTVLARPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174
           T+G   ++ +    L     +  +   P FP Y+     +   +        + +++D D
Sbjct: 105 TMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVP-ADTEHFQIDFD 163

Query: 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK------LGIMVIADEVYDHL 228
           A+E   + +T  ++I +P NP G VY+ + ++K+++  +K        I +IADE Y  +
Sbjct: 164 ALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREI 223

Query: 229 AFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLVTSDP 272
            +              V       L   S SK   +PG R+G+++  D 
Sbjct: 224 VYDGIKV-------PFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDE 265

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  127 bits (322), Expect = 6e-34
 Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
             +I L  G+P       T    V+ +    +    + YS++ GI   RRAI+ +     
Sbjct: 37  EDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRY 92

Query: 105 PYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163
             ++ P+    +T+G  + +  ++      G  IL+P P +P +   A  +  +VR   L
Sbjct: 93  DVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPL 152

Query: 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
           +P   +  +L+     +      +++  P NP          +++   AK+  +MV+ D 
Sbjct: 153 VPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDL 212

Query: 224 VYDHLAFGNTPFVPMGVFGSI--VP-----VLTLGSISKRWIVPGWRLGWLV 268
            Y  + +            SI  VP      +   ++SK + + GWR+G++V
Sbjct: 213 AYADIVYDGWKAP------SIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMV 258

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  125 bits (316), Expect = 2e-33
 Identities = 50/225 (22%), Positives = 82/225 (36%), Gaps = 7/225 (3%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
             LI L  G              + A+  ++       Y      LP     A +     
Sbjct: 25  VGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRY 80

Query: 105 PYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163
              L P       +G  + +  +L  L  P   +LLP   +P Y   A  + L      L
Sbjct: 81  GVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL 140

Query: 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
                   DL AV          L++  P NP G V  + + ++    A+K G+ +I D 
Sbjct: 141 RE--DGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDN 198

Query: 224 VYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            Y    +      P+ + G+   V+ L S+SK + + G+RLG+ +
Sbjct: 199 PYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFAL 243

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  125 bits (315), Expect = 8e-33
 Identities = 58/286 (20%), Positives = 99/286 (34%), Gaps = 43/286 (15%)

Query: 23  ASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFP----SFRTASVAVDAIVHSVRSA 78
            +GI    +++ L + L  +   P+  LG G+P+        F     A+     + ++ 
Sbjct: 14  PTGI--SQLMDDLGDALKSDQ--PVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKAN 69

Query: 79  RFNC-----YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP 133
                    YS+  G      A+  + NR   + L+ +++ LT G   A   +  +    
Sbjct: 70  SSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGA 129

Query: 134 GAN---------------ILLPRPGFPYYEARATHS---------HLEVRHFDLLPAKGW 169
             N               +L   P +  Y                  EV H        +
Sbjct: 130 FVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKY 189

Query: 170 EVDLDAVEALA---DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
            VD +A+E L    +    A+    P NP GNV T + +  +AE AK+  I +I D  Y 
Sbjct: 190 RVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYG 249

Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
                         + +    +   S+SK   +PG R G +V    
Sbjct: 250 MPFPNIIYSDAHLNWDN--NTILCFSLSK-IGLPGMRTGIIVADAK 292

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  121 bits (307), Expect = 4e-32
 Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 17/228 (7%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100
           +++ + +I L  G+P     F T    VD  + S++      Y+ + GIL  R  I++  
Sbjct: 25  ESEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELY 79

Query: 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH 160
                  + PD++ +T G +  +   L+ +   G  +L+  P +P Y+        +   
Sbjct: 80  KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139

Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
            D           +++E    + T A++I +P NP G V      ++I E A +    +I
Sbjct: 140 CDFTV--------ESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYII 187

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           +DE+Y+ L +    +  +    ++   + +   SK + + GWR+G+++
Sbjct: 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVI 235

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  121 bits (307), Expect = 4e-32
 Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 20/245 (8%)

Query: 32  LNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91
           L +LL+ +     +  + LG G+P     F T     DA+ +       N Y  +     
Sbjct: 12  LRALLKEITPK--KRGLDLGIGEPQ----FETPKFIQDALKNHT--HSLNIYPKSAFEES 63

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEA 149
            R A   +  R    +L  +++  TLG  + +    + +        I  P P +  YE 
Sbjct: 64  LRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG 123

Query: 150 RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKI 208
            A     +     L     +   L+      +   V LVI+N P NP G   + + L   
Sbjct: 124 AAKFIKAKSLLMPLTKENDFTPSLNE----KELQEVDLVILNSPNNPTGRTLSLEELISW 179

Query: 209 AETAKKLGIMVIADEVYDHLAFGNTP-----FVPMGVFGSIVPVLTLGSISKRWIVPGWR 263
            + A K   ++I DE Y  +     P        +    +   VL + S+SKR   PG R
Sbjct: 180 VKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLR 239

Query: 264 LGWLV 268
            G++ 
Sbjct: 240 SGFIA 244

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  121 bits (307), Expect = 7e-32
 Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 20/233 (8%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRD--LP 105
           +   HGD        T                   Y+   G L  R  +A  L      P
Sbjct: 42  VDFSHGDVD-AHE-PTPGAFDLFSAGVQS-GGVQAYTEYRGDLGIRDLLAPRLAAFTGAP 98

Query: 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARATHSHLEVRH 160
              + D + +T G   A+ + +      G  + + +P +                +++ +
Sbjct: 99  VD-ARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDY 157

Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
                     +DL  +E          +  NP NP G VY+ + + +IA  A + G  VI
Sbjct: 158 VSA-DETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVI 216

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLV 268
           AD++Y  L +    +       +        V+T+   SK   + G+RLG   
Sbjct: 217 ADQLYSRLRYAGASYTH---LRAEAAVDAENVVTIMGPSKTESLSGYRLGVAF 266

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  121 bits (306), Expect = 9e-32
 Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 6/225 (2%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
            PLI +  G P       T    +D    ++       Y +  G    ++AI D+  R  
Sbjct: 47  LPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQY 102

Query: 105 PYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163
              L  +D V +  G    +  + T +  PG  +LLP PG+  Y A    +  +    +L
Sbjct: 103 NVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNL 162

Query: 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
            P   +  D   V++   + T  + +  P NP G+  T +   +     K     ++ D 
Sbjct: 163 EP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDF 221

Query: 224 VYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            Y    F       +         + + S+SK + + G+R+G+ V
Sbjct: 222 AYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAV 266

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score =  119 bits (300), Expect = 6e-31
 Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 34/260 (13%)

Query: 28  VRGVLNSLLENLNKNDTRP-LIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYS 84
              +  S +  L K   RP ++    G   P  FP    A  A   +      A    YS
Sbjct: 14  AGRIQASTIRELLKLTQRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVA-LQ-YS 71

Query: 85  STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF 144
            T G  P R  +A+++       + P++V +T G  QA++++  V    G+ +LL  P +
Sbjct: 72  PTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSY 125

Query: 145 PY-------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP--GNP 195
                       R                +G   DLDA+E +        + + P   NP
Sbjct: 126 MGAIQAFRLQGPRFLTVPAG--------EEG--PDLDALEEVLKRERPRFLYLIPSFQNP 175

Query: 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---GSIVPVLTLGS 252
            G +      +++ +   + G++V+ D+ Y  L FG      +           V+ LGS
Sbjct: 176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGS 235

Query: 253 ISKRWIVPGWRLGWLVTSDP 272
            SK  + PG R+ + V    
Sbjct: 236 FSK-VLSPGLRVAFAVAHPE 254

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  117 bits (296), Expect = 2e-30
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 11/224 (4%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRD--LP 105
           I LG G+P     F T     +    ++       Y   +G+L  R AIA+ L +   + 
Sbjct: 29  ISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNGIE 83

Query: 106 YKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
               P   + + LG  QA  + L+   + G  +L+P P F  Y      +  +       
Sbjct: 84  AD--PKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTY 141

Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
               + +++D ++    + T AL+I +P NP G V T + L++IA+   +  ++VI+DEV
Sbjct: 142 EEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEV 201

Query: 225 YDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWL 267
           Y+H  + +     +     +    +T+   SK + + GWRLG++
Sbjct: 202 YEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFV 245

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  118 bits (297), Expect = 6e-30
 Identities = 57/302 (18%), Positives = 101/302 (33%), Gaps = 45/302 (14%)

Query: 24  SGITVRGVLNSLLENLNKNDTRPL---IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF 80
            GI  R     + EN ++   R L   +               A+   + +   +     
Sbjct: 81  DGIEGR-FERYIAENRDQEGVRFLGKSLSYVRDQLG----LDPAAFLHEMVDGILG---- 131

Query: 81  NCYSSTVGILPARRAIA-DYLNRDLPYKLSPD---DVYLTLGCTQAIEVILTVLAR---- 132
             Y     +L     I   Y+ R++     P    +++   G T A+  I   L      
Sbjct: 132 CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLL 191

Query: 133 -PGANILLPRPGF-PYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186
             G  + +  P F PY E    A+     + +      P+  W+     ++ L D     
Sbjct: 192 KAGDKVAIGMPVFTPYIEIPELAQYALEEVAIN---ADPSLNWQYPDSELDKLKDPAIKI 248

Query: 187 LVIINPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244
              +NP NP       + L+++     +    +M++ D+VY   A             +I
Sbjct: 249 FFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLF------AI 302

Query: 245 VP--VLTLGSISKRWIVPGWRLGWLVTSDPNGI------LQDSGIVDSIKSFLNISSDPA 296
            P   L + S SK +   GWRLG +     N        LQ+S  V     + ++  D  
Sbjct: 303 CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVR 362

Query: 297 TF 298
           + 
Sbjct: 363 SL 364

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  117 bits (294), Expect = 1e-29
 Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 34/243 (13%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI-ADYLNRDLPY 106
           +   H +           V  + +  +V     N Y      L     I   +L      
Sbjct: 106 VNYCHTELG----LNRDKVVAEWVNGAVA----NNYPVPDRCLVNTEKIINYFLQELSYK 157

Query: 107 KLSPD---DVYLTLGCTQAIEVILTVLAR-----PGANILLPRPGF-PYYE----ARATH 153
             +     D++ T G T AI      LA       G  I +  P F PY           
Sbjct: 158 DANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYEL 217

Query: 154 SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
             +++  +       WE++ + +E L D +  AL+++NP NP    +    L  I +  +
Sbjct: 218 VEVDLHSY---EKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVE 274

Query: 214 K-LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLVTS 270
           K   +M+I+DEVY                 S+VP   + + S SK +   GWRLG +  +
Sbjct: 275 KNPKLMIISDEVYGAFVPNFKSIY------SVVPYNTMLVYSYSKLFGCTGWRLGVIALN 328

Query: 271 DPN 273
           + N
Sbjct: 329 EKN 331

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  110 bits (277), Expect = 9e-28
 Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 21/250 (8%)

Query: 32  LNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91
           L+  ++ ++  +    +PL  G+P       T  V  DA+  S+       Y  T G+  
Sbjct: 17  LHEAMQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASL--HELEKYPLTAGLPE 70

Query: 92  ARRAIADYLNR--DLPYKLSPDD-VYLTLGCTQAIEVILTVLARPGAN-----ILLPRPG 143
            R+A A++L R  D    +  D+ +   LG  +A+   +  +  P ++     I+ P P 
Sbjct: 71  LRQACANWLKRRYDGL-TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPF 129

Query: 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203
           +  YE        E+ HF   PA  +  D  ++     + T  + + +P NP G+V    
Sbjct: 130 YQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLD 188

Query: 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTP-----FVPMGVFGSIVPVLTLGSISKRWI 258
             +++ +   K G ++ +DE Y  + F              +  S   +L   S+SKR  
Sbjct: 189 GWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSN 248

Query: 259 VPGWRLGWLV 268
           VPG R G++ 
Sbjct: 249 VPGLRSGFVA 258

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score =  110 bits (277), Expect = 1e-27
 Identities = 60/286 (20%), Positives = 107/286 (37%), Gaps = 33/286 (11%)

Query: 4   GGGANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRP-LIPLGHG--DPSAFPS 60
           G G   N      + E   +       +  S +  L K      +I L  G  +P  FP 
Sbjct: 36  GIGMEENIKSMLGDVERFFSKK--ALEMRASEVRELLKLVETSDIISLAGGLPNPKTFPK 93

Query: 61  FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
                + V+ +      A    Y +T G  P R  +  +L +        +D+ +T G  
Sbjct: 94  EIIRDILVEIMEKYADKA-LQ-YGTTKGFTPLRETLMKWLGKRYG-ISQDNDIMITSGSQ 150

Query: 121 QAIEVILTVLARPGANILLPRPGFPY-------YEARATHSHLEVRHFDLLPAKGWEVDL 173
           QA+++I  V   PG  +++  P +         YE +     L+         +G  + +
Sbjct: 151 QALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLD--------DEG--MKV 200

Query: 174 DAVEAL-----ADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
           + +E       +    V +V   P   NP G        + + E A +   +V+ D+ Y 
Sbjct: 201 EILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYG 260

Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
            L +   P   +    +   V+ LG+ SK  + PG+R+GW+V    
Sbjct: 261 ELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMVGDPG 305

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score =  110 bits (276), Expect = 2e-27
 Identities = 58/265 (21%), Positives = 98/265 (36%), Gaps = 33/265 (12%)

Query: 28  VRGVLNSLLENLNKNDTRP-LIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYS 84
            + + +S++  + K       I  G G  DP  FP    A +A + I           YS
Sbjct: 25  GQNMKSSIIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYT-LQ-YS 82

Query: 85  STVGILPARRAIADYLNRDL-PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPG 143
           +T G    ++ I   L R      L  D++  T+G  QA+++I  +     +  +L  P 
Sbjct: 83  TTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPA 142

Query: 144 FPY-------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP---- 192
           +         Y A      LE          G  +DL+ +E    E      I       
Sbjct: 143 YLGAINAFRQYLANFVVVPLE--------DDG--MDLNVLERKLSEFDKNGKIKQVKFIY 192

Query: 193 -----GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247
                 NP G   + +  + + E A+K  + ++ D+ Y  L +      P+   G    V
Sbjct: 193 VVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERV 252

Query: 248 LTLGSISKRWIVPGWRLGWLVTSDP 272
           + L + SK  + PG R+G +  S  
Sbjct: 253 VLLNTFSK-VLAPGLRIGMVAGSKE 276

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  108 bits (273), Expect = 4e-27
 Identities = 46/245 (18%), Positives = 85/245 (34%), Gaps = 41/245 (16%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR----SARFNCYSSTVGILPARRAI 96
           +N    +I L  GD +  P     +   +A   S+           Y    G+   R+ +
Sbjct: 29  ENPQHTVINLSIGDTT-QP---LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKL 84

Query: 97  ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARA 151
           ++   R     +   +++++ G    +  +L+    P   + +  P +P Y        A
Sbjct: 85  SEDFYRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGA 140

Query: 152 THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKIAE 210
                E+     L    +  +            + ++ +  P NP G V     L+ I  
Sbjct: 141 K----EIIALPCLQENAFFPEFPEDTH------IDILCLCSPNNPTGTVLNKDQLRAIVH 190

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI--VP-----VLTLGSISKRWIVPGWR 263
            A +  I+++ D  Y        P +P     SI  +P      + + S SK     G R
Sbjct: 191 YAIEHEILILFDAAYSTFISD--PSLPK----SIFEIPDARFCAIEINSFSKPLGFAGIR 244

Query: 264 LGWLV 268
           LGW V
Sbjct: 245 LGWTV 249

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  107 bits (271), Expect = 6e-27
 Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 45/262 (17%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
             +     G+P     F T    V+A   ++       Y    G    R AIA  L RD 
Sbjct: 30  IDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDN 84

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF-PYYEARATHSHLEVRHFDL 163
                 D++ +T G  Q+I  ++  +  PG  +++P P +  Y E         V+  + 
Sbjct: 85  GLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEM--------VKLAEG 136

Query: 164 LP-------AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
            P          ++V  + +       T  LV   P NP G VYT   ++ IA+ A + G
Sbjct: 137 TPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAG 196

Query: 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLV--- 268
           + V++DE+Y+ + + +   + +   G+  P      +     +K + + GWR+G+L    
Sbjct: 197 LWVLSDEIYEKILYDDAQHLSI---GAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPV 253

Query: 269 -------------TSDPNGILQ 277
                        TS+     Q
Sbjct: 254 PLVKAATKIQGHSTSNVCTFAQ 275

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score =  108 bits (271), Expect = 6e-27
 Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 30/242 (12%)

Query: 47  LIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           LI L  G  DP   P      +A + +    +S     Y+   GI   R  +A +L +  
Sbjct: 36  LISLAAGDPDPELIPRAVLGEIAKEVLEKEPKS--VM-YTPANGIPELREELAAFLKKYD 92

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY-------YEARATHSHLE 157
             ++SP+++ +T+G T A++++  VL  PG  ++   P +           A+     ++
Sbjct: 93  HLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVD 152

Query: 158 VRHFDLLPAKGWEVDLDAVEAL-----ADENTVALVIINP--GNPCGNVYTYQHLQKIAE 210
                     G  + +D +E       A    V L+   P   NP G   + +  + + E
Sbjct: 153 --------NDG--MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLE 202

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
            A K  +++I D  Y+ + +     VP+    +   V+  G++SK  +  G+R+GW++  
Sbjct: 203 IASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKV-LGTGFRIGWIIAE 261

Query: 271 DP 272
             
Sbjct: 262 GE 263

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  107 bits (269), Expect = 1e-26
 Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 23/254 (9%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100
                 +I L  G+P     F T    V+  V  ++      Y+   GI   R  IA  +
Sbjct: 37  IKKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRI 91

Query: 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH 160
                  +SPD V +T G  QA+      L  PG  +++  P +  Y  +   +   V  
Sbjct: 92  GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNV 151

Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
            +   +K ++  L+ VE L    T A++I +P NP G VY  + L+ +   AKK    +I
Sbjct: 152 VETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYII 211

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLV----------- 268
           +DEVYD L + +  F  +         ++ +   SK   + GWR+G+L+           
Sbjct: 212 SDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSK 270

Query: 269 -----TSDPNGILQ 277
                TS  N + Q
Sbjct: 271 IQSHTTSCINTVAQ 284

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  106 bits (267), Expect = 2e-26
 Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 27/251 (10%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
             L+ L  G+P     F T     +A   ++       Y+   GI   R A+A+   R+ 
Sbjct: 31  VDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRREN 85

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
              ++P++  +T+G +QA+  +   +  PG  +++  P +  Y      +   V   + L
Sbjct: 86  GLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETL 145

Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
           P +G+  D + V       T ALV+ +P NP G VY  + L+ +A  A +    +++DE+
Sbjct: 146 PEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEI 205

Query: 225 YDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLV-------------- 268
           Y+HL +    F P    G + P   LT+   +K + + GWR+G+                
Sbjct: 206 YEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261

Query: 269 --TSDPNGILQ 277
             T+ P+ I Q
Sbjct: 262 QSTTSPDTIAQ 272

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  104 bits (261), Expect = 2e-25
 Identities = 55/252 (21%), Positives = 84/252 (33%), Gaps = 44/252 (17%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR----SARFNCYSSTVGILPARRAI 96
           K     +I LG GD +  P      V   A+            ++ Y +  G  P R AI
Sbjct: 52  KYPDAQVISLGIGDTT-EP---IPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAI 107

Query: 97  ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY--------- 147
           A          +  DDV+++ G    I  +  +       I +  P +P Y         
Sbjct: 108 AKTFYGG--LGIGDDDVFVSDGAKCDISRLQVMFG-SNVTIAVQDPSYPAYVDSSVIMGQ 164

Query: 148 ---EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQ 203
                     +  + +    P  G+  DL  V          ++    P NP G   T +
Sbjct: 165 TGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG------RTDIIFFCSPNNPTGAAATRE 218

Query: 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI--VP-----VLTLGSISKR 256
            L ++ E AKK G +++ D  Y      + P        SI  +P      +   S S  
Sbjct: 219 QLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-------RSIFEIPGAEEVAMETASFSNY 271

Query: 257 WIVPGWRLGWLV 268
               G RLGW V
Sbjct: 272 AGFTGVRLGWTV 283

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  102 bits (255), Expect = 1e-24
 Identities = 33/266 (12%), Positives = 80/266 (30%), Gaps = 47/266 (17%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA----RRAIADYLNRD 103
             +  GD      +        A++  V       Y              + I +     
Sbjct: 59  ADVASGDGLFLEEYWKQHKEASAVL--VSPWHRMSYFFNPVSNFISFELEKTIKELHEVV 116

Query: 104 LPYKLSPDDVYLTLGCTQAIEVILTVLA--------RPGANILLPRPGFPYYEARATHSH 155
                    +   +G TQ I  ++  L+         P + ++   P +P +        
Sbjct: 117 GNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE------ 170

Query: 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215
            + ++FD      W  +      +++      ++ +P NP G +                
Sbjct: 171 -QTKYFDK-KGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-------------- 214

Query: 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275
            ++     +YD + +    + P  +       + L ++SK     G R GW +  D +  
Sbjct: 215 AVIKGCKSIYDMVYYWPH-YTP--IKYKADEDILLFTMSKFTGHSGSRFGWALIKDES-- 269

Query: 276 LQDSGIVDSIKSFL-NISSDPATFIQ 300
                + +++ +++   +       Q
Sbjct: 270 -----VYNNLLNYMTKNTEGTPRETQ 290

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  101 bits (253), Expect = 3e-24
 Identities = 51/250 (20%), Positives = 84/250 (33%), Gaps = 41/250 (16%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYSSTVGILPARRAI 96
           KN    +I LG GD +  P         DA+  +         ++ Y +  G    R A+
Sbjct: 65  KNPDAKIISLGIGDTT-EP---LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAV 120

Query: 97  ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARA 151
           A           + D+++++ G    I  I  +       + +  P +P Y         
Sbjct: 121 ASTFYGH--AGRAADEIFISDGSKCDIARIQMMFG-SKPTVAVQDPSYPVYVDTSVMMGM 177

Query: 152 THSHLE-----VRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHL 205
           T  H       + +    P   +  DL   +         ++    P NP G   T   L
Sbjct: 178 TGDHNGTGFDGIEYMVCNPDNHFFPDLSKAK------RTDIIFFCSPNNPTGAAATRAQL 231

Query: 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI--VP-----VLTLGSISKRWI 258
            ++   A+K G +++ D  Y        P  P     +I  +P      +   S SK   
Sbjct: 232 TELVNFARKNGSILVYDAAYALYISN--PDCPK----TIYEIPGADEVAIETCSFSKYAG 285

Query: 259 VPGWRLGWLV 268
             G RLGW V
Sbjct: 286 FTGVRLGWTV 295

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score = 98.5 bits (245), Expect = 2e-23
 Identities = 37/234 (15%), Positives = 72/234 (30%), Gaps = 33/234 (14%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHS--VRSARFNCYSSTVGILPA--RRAIADYLNRD 103
           + L HGDP+A+  +         +        + F+  ++    L      AI D     
Sbjct: 25  VNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVV 84

Query: 104 LPYKLSPDDVYLTLGCTQAIEVILTVLARPGA----NILLPRPGFPYYEARATHSHLEVR 159
                    + +  G TQ  +  +  L+        +++   P +  Y            
Sbjct: 85  GNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEET-------- 136

Query: 160 HFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219
               + +  ++ + DA      +     ++ +P NP G +      + +          V
Sbjct: 137 --TYVRSGMYKWEGDA-WGFDKKGPYIELVTSPNNPDGTI-----RETVVNRPDDDEAKV 188

Query: 220 IADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDP 272
           I D  Y    +  TP              + L + SK     G R+GW +  D 
Sbjct: 189 IHDFAYYWPHY--TPITRRQ------DHDIMLFTFSKITGHAGSRIGWALVKDK 234

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score = 94.7 bits (236), Expect = 5e-22
 Identities = 48/250 (19%), Positives = 77/250 (30%), Gaps = 45/250 (18%)

Query: 54  DPSAFP-SFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY------ 106
             + F  S    +V     V        N      G+  AR   A YL+           
Sbjct: 36  ADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNN 95

Query: 107 -KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
             L    + LT      +             +++  PG+              RHF LL 
Sbjct: 96  SSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGY-------------DRHFLLLQ 142

Query: 166 AKGWEV----------DLDAVE-ALADENTVALVIINP--GNPCGNVYTYQHLQKIAE-T 211
             G+E+          D+DAVE     + +V  ++  P   NP G   + +  +++A   
Sbjct: 143 TLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQ 202

Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-------VLTLGSISKRWIV-PGWR 263
           A      + AD+ Y               F  +              S SK  I   G  
Sbjct: 203 AAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK--ITFAGAG 260

Query: 264 LGWLVTSDPN 273
           LG++ +S+ N
Sbjct: 261 LGFVASSEDN 270

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 94.0 bits (234), Expect = 7e-22
 Identities = 47/281 (16%), Positives = 76/281 (27%), Gaps = 54/281 (19%)

Query: 28  VRGVLNSLLENLNKNDTRPL-IPLGHG--DPSAFP-SFRTASVAVDAIVHSVRSARFNCY 83
           +  V   +     +   + L + L  G         S    S+              N Y
Sbjct: 14  LAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRN-Y 72

Query: 84  SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL--------------TV 129
              +GI   R   A+ L       L  D V    G +  I   L                
Sbjct: 73  GGLLGIADIRELWAEALG------LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPW 126

Query: 130 LARPGANILLPRPG-------FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE 182
            A      L P PG         ++                +P      D+  V  L  +
Sbjct: 127 SAEEKVKWLCPVPGYDRHFTITEHFGFE----------MINVPMTDEGPDMGVVRELVKD 176

Query: 183 NTVALVIINP--GNPCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFGNTPFVPMG 239
             V  +   P  GNP G  ++ Q  +++AE +       ++ D  Y      +   +   
Sbjct: 177 PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHN 236

Query: 240 VFGSIVP------VLTLGSISKRWIV-PGWRLGWLVTSDPN 273
           V               + S SK  I   G  + +  +S  N
Sbjct: 237 VIEFAQAAGNPNRFWFMSSTSK--ITHAGSGVSFFASSKEN 275

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 54/258 (20%), Positives = 84/258 (32%), Gaps = 43/258 (16%)

Query: 47  LIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNC---YSSTVGILPARRAIADYLN 101
           +I L  G  +P+ FP         +                YS + GI      +     
Sbjct: 33  MISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQLQI 92

Query: 102 R-------DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           +         P      D+ +T G  Q +  +  ++  PG N+LL  P +          
Sbjct: 93  KLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGT------- 145

Query: 155 HLEVRHFDLLPAKGWEVDLDA----VEALAD--------------ENTVALVIINP--GN 194
            L+      L      V  D      ++L D              +NT   +   P   N
Sbjct: 146 -LQS--LHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNN 202

Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254
           P GN  T +  ++I E A+K   ++I D+ Y  L F                V+   S S
Sbjct: 203 PTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFS 262

Query: 255 KRWIVPGWRLGWLVTSDP 272
           K  I  G R+G+L    P
Sbjct: 263 KI-ISSGLRIGFLTGPKP 279

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score = 91.8 bits (229), Expect = 3e-21
 Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 25/187 (13%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
            +A+A +        +    +    G T++I  +           ++  PGF  Y     
Sbjct: 65  HQALARHHQ------VPASWILAGNGETESIFTV--ASGLKPRRAMIVTPGFAEYGRALA 116

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
            S  E+R + L  A GW+   DA+      +   L +  P NP G +     LQ IA+  
Sbjct: 117 QSGCEIRRWSLREADGWQ-LTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRC 175

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-------VLTLGSISKRWIVPGWRLG 265
           K L I +I DE     AF    F+P       +P       +  L S++K + +PG RLG
Sbjct: 176 KSLNINLILDE-----AF--IDFIPHET--GFIPALKDNPHIWVLRSLTKFYAIPGLRLG 226

Query: 266 WLVTSDP 272
           +LV SD 
Sbjct: 227 YLVNSDD 233

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 88.7 bits (221), Expect = 3e-20
 Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 30/189 (15%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
            ++I +Y       KL    + L  G   A E+I  +       IL+  P +  YE  A 
Sbjct: 67  NKSIENY------LKLKDIGIVLGNG---ASEII-ELSISLFEKILIIVPSYAEYEINAK 116

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAET 211
              + V    L   +   +D + + +  D+     VII NP NP G +   +    + + 
Sbjct: 117 KHGVSVVFSYLD--ENMCIDYEDIISKIDDVD--SVIIGNPNNPNGGLINKEKFIHVLKL 172

Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-------VLTLGSISKRWIVPGWRL 264
           A++    +I DE +         F       S V        +  + +++K + +PG R 
Sbjct: 173 AEEKKKTIIIDEAFIE-------FTGDPSS-SFVGEIKNYSCLFIIRAMTKFFAMPGIRF 224

Query: 265 GWLVTSDPN 273
           G+ +T++  
Sbjct: 225 GYGITNNKE 233

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 89.4 bits (222), Expect = 3e-20
 Identities = 41/274 (14%), Positives = 75/274 (27%), Gaps = 39/274 (14%)

Query: 28  VRGVLNSLLENLNKNDTRPL-IPLGHG--DPSAFP-SFRTASVAVDAIVHSVRSARFNCY 83
           +      +    ++  ++ L + L  G         +    ++       +        Y
Sbjct: 15  IGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNY 74

Query: 84  SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI--------------EVILTV 129
               GI+  R+  AD L          + V      +  I              + +   
Sbjct: 75  GGLDGIVDIRQIWADLLGVP------VEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPW 128

Query: 130 LARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189
                   + P PG  Y    +            +P      D+DAVE L     V  + 
Sbjct: 129 SKEETVKWICPVPG--YDRHFSITERFGFE-MISVPMNEDGPDMDAVEELVKNPQVKGMW 185

Query: 190 INP--GNPCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246
           + P   NP G   T    ++++          V+ D  Y      +     + + G    
Sbjct: 186 VVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEA 245

Query: 247 ------VLTLGSISKRWIV-PGWRLGWLVTSDPN 273
                      S SK  I   G  + + +TS  N
Sbjct: 246 AGNPNRFWAFTSTSK--ITLAGAGVSFFLTSAEN 277

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score = 88.6 bits (220), Expect = 7e-20
 Identities = 36/245 (14%), Positives = 90/245 (36%), Gaps = 21/245 (8%)

Query: 41  KNDTRPL-IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADY 99
             + +        G  +     +  + ++DA+ + +       Y+   GI   R      
Sbjct: 42  SAEAKSTTYNATIGMAT-NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQK 100

Query: 100 L---NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSH- 155
           +   N +L    +     +T   T  + ++  +       ILLP   +  Y+      + 
Sbjct: 101 MLRDNPELSID-NMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNG 159

Query: 156 LEVRHFDLLPAKGWEVDLDAVEAL---ADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
             ++ + +    G     D++       +++ V +++  P NP G   T++ +  I E  
Sbjct: 160 ANLQTYPIFDKDG-HYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAI 218

Query: 213 KKLG-----IMVIADEVYDHLAFGNTPFVPM-----GVFGSIVPVLTLGSISKRWIVPGW 262
           K L      ++ + D+ Y  L + +     +      +  + +  + L   +K +   G+
Sbjct: 219 KALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGF 278

Query: 263 RLGWL 267
           R+G++
Sbjct: 279 RVGFM 283

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 85.3 bits (212), Expect = 6e-19
 Identities = 35/183 (19%), Positives = 76/183 (41%), Gaps = 7/183 (3%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           AIA + +      +    V         +  ++   +  G  +++  P +  +      +
Sbjct: 72  AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGN 131

Query: 155 HLEVRHFDLLPAKG-WEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
              V    L      W  D+  +EA LA      +++ +P NP G V+T   L+ +A+  
Sbjct: 132 QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLC 191

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLVTS 270
           ++ G+ VI+DE++  + +G  P +P   + ++       L S SK + +P     + +  
Sbjct: 192 ERHGVRVISDEIHMDMVWGEQPHIP---WSNVARGDWALLTSGSKSFNIPALTGAYGIIE 248

Query: 271 DPN 273
           + +
Sbjct: 249 NSS 251

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 84.9 bits (211), Expect = 9e-19
 Identities = 32/184 (17%), Positives = 75/184 (40%), Gaps = 13/184 (7%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           A A++      Y+  P+ ++      + + + +       + +++P P +P +    + +
Sbjct: 66  ATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSAT 125

Query: 155 HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214
             E    D        ++L  VE        ++++ NP NP G V+  + L ++ + A +
Sbjct: 126 QREGIFIDA----TGGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHR 181

Query: 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWLVT 269
               V+ DE++  L F             +        +T+ + SK W + G +   ++ 
Sbjct: 182 YDARVLVDEIHAPLVFDGQ-HTV---AAGVSDTAASVCITITAPSKAWNIAGLKCAQIIF 237

Query: 270 SDPN 273
           S+P+
Sbjct: 238 SNPS 241

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 84.9 bits (211), Expect = 9e-19
 Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           A+ D+   +  Y    +D+    G   AI + +    + G  +L+  P +P +      +
Sbjct: 74  AVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLN 133

Query: 155 HLEVRHFDLLPAKG-WEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
           + ++    L    G +++D + +E  + + +    ++ NP NP G V+  + L++I    
Sbjct: 134 NRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLC 193

Query: 213 KKLGIMVIADEVYDH--LAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLG 265
           +K  +++++DE+  H  L       V    F ++ P      L L S +K + + G +  
Sbjct: 194 QKHHVILVSDEI--HQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNS 248

Query: 266 WLVTSDPN 273
           + +  +P 
Sbjct: 249 YAIIENPT 256

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 83.7 bits (208), Expect = 2e-18
 Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 14/188 (7%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           A+AD+   +   +   D      G   AI  ++     PG  IL+  P +  + +    +
Sbjct: 70  AVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGN 129

Query: 155 HLEVRHFDLLPAKG-WEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
              V   DL+     + V+   +E  LA  +   +V  NP NP G  ++ + +++IAE  
Sbjct: 130 GRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELC 189

Query: 213 KKLGIMVIADEVYDH--LAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLG 265
            K  +++I+DE+  H  L   +    P     ++       V++L S SK + +      
Sbjct: 190 AKHQVLLISDEI--HGDLVLTDEDITP---AFTVDWDAKNWVVSLISPSKTFNLAALHAA 244

Query: 266 WLVTSDPN 273
             +  +P+
Sbjct: 245 CAIIPNPD 252

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 84.1 bits (209), Expect = 2e-18
 Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 14/188 (7%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           A+ D+  ++  Y +  +D+    G   AI + L   +  G  +L+  P +  +      +
Sbjct: 104 AVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLN 163

Query: 155 HLEVRHFDLLPAKG-WEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
              +    L    G +E+D + +E  + D N    ++ +P NP G V+    L KIAE  
Sbjct: 164 DHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELC 223

Query: 213 KKLGIMVIADEVYDH--LAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLG 265
           KK G+++++DE+  H  LA             ++        + L S +K + + G +  
Sbjct: 224 KKHGVILVSDEI--HQDLALFGNTHHS---LNTLDASYKDFTIILSSATKTFNIAGTKNS 278

Query: 266 WLVTSDPN 273
           + +  + +
Sbjct: 279 FAIIQNES 286

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 83.7 bits (208), Expect = 2e-18
 Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 14/188 (7%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
            +  ++     + +  D +  T G   A+   +    +PG  +++  P +  +     + 
Sbjct: 74  TVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQ 133

Query: 155 HLEVRHFDLLPAKG-WEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
             ++   +LL   G + +D   +E    D+N  AL+  +P NP G V+    LQKI +  
Sbjct: 134 ERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIV 193

Query: 213 KKLGIMVIADEVYDH--LAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLG 265
            K  +M+ +DE+  H  L            F SI        +T  + SK + + G  + 
Sbjct: 194 LKSDLMLWSDEI--HFDLIMPGYEHTV---FQSIDEQLADKTITFTAPSKTFNIAGMGMS 248

Query: 266 WLVTSDPN 273
            ++  +P+
Sbjct: 249 NIIIKNPD 256

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 8/177 (4%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R  +A Y+ +     ++ D+++   G  + ++ +L     PG   L  +P +  +   A 
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAET 211
            +H E           + +D+D            +V +  P NP G+V +   +++I   
Sbjct: 135 GTHTEFIAVSR--GADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192

Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           A  +   VI DE Y    F  +P     +      ++   ++SK +   G RLG+ V
Sbjct: 193 APGI---VIVDEAY--AEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV 244

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 80.6 bits (200), Expect = 3e-17
 Identities = 35/186 (18%), Positives = 84/186 (45%), Gaps = 11/186 (5%)

Query: 95  AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS 154
           +I ++L R   +K+  + +  + G   AI +++  L +    I++  P +  + +   ++
Sbjct: 75  SIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNN 134

Query: 155 HLEVRHFDLLPAKG--WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
           + E+    L   +   + +D + +E    +  +  ++ NP NP G V+T   L+K+ +  
Sbjct: 135 NRELIISPLQKLENGNYIMDYEDIENKIKDVKL-FILCNPHNPVGRVWTKDELKKLGDIC 193

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGWL 267
            K  + +I+DE++  +       +P     SI        +T  + +K + + G +  ++
Sbjct: 194 LKHNVKIISDEIHSDIILKKHKHIP---MASISKEFEKNTITCMAPTKTFNIAGLQSSYV 250

Query: 268 VTSDPN 273
           V  D  
Sbjct: 251 VLPDEK 256

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 13/174 (7%)

Query: 67  AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126
               +   +     N Y         R  + + +        +  +V L  G  + I ++
Sbjct: 48  LRSELAARLGEVALNRYPVPSS-EALRAKLKEVMQVP-----AGMEVLLGNGSDEIISML 101

Query: 127 LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186
               ARPGA ++ P PGF  Y   A  + LE     L     + +D  A+ A   E+  A
Sbjct: 102 ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPA 159

Query: 187 LVII-NPGNPCGNVYTYQHLQKIAETA--KKLGIMVIADEVYDHLAFGNTPFVP 237
           +V +  P NP GN++    ++ I   A       +V+ DE Y    F    ++ 
Sbjct: 160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP--FAQESWMS 211

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 42/184 (22%), Positives = 72/184 (39%), Gaps = 24/184 (13%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA-NILLPRPGFPYYEARA 151
               A Y        + P+ V ++ G  + IE+++     PG   IL   P +  Y   A
Sbjct: 64  IENYAQYAG------VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA 117

Query: 152 THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAE 210
               +E R    L    W++DL  +    D   V +V + +P NP G +   Q  + + E
Sbjct: 118 ETIGVECRTVPTLD--NWQLDLQGISDKLDG--VKVVYVCSPNNPTGQLINPQDFRTLLE 173

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP----VLTLGSISKRWIVPGWRLGW 266
             +   I+V  DE Y         F P       +     +  L ++SK + + G R G+
Sbjct: 174 LTRGKAIVVA-DEAY-------IEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGF 225

Query: 267 LVTS 270
            + +
Sbjct: 226 TLAN 229

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 76.8 bits (190), Expect = 5e-16
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 21/178 (11%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R+ +A          +  + + +T G T A   I    A  G+  L+  P F  YE    
Sbjct: 56  RQMLAKR------NSVDNNAILVTNGPTAAFYQI--AQAFRGSRSLIAIPSFAEYEDACR 107

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
               EV  +            + +      N     + NP NP G +     + ++    
Sbjct: 108 MYEHEVCFYPS---------NEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDH 158

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
                  + D+ Y  ++F     +          ++ + S S  + +PG R+G++V +
Sbjct: 159 P--DTTFVLDQSY--VSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN 212

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 10/178 (5%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           R+ +AD+        L  +++  T G  + IE++  VL     N ++  P F  Y   A 
Sbjct: 73  RKEVADFYQ------LEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNAL 126

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
               EVR   L   +  E DL+ +    DE T  + I NP NP GN      +Q   +  
Sbjct: 127 IEGAEVREIPL--LQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
               ++V+ DE Y              +  +   ++   + SK + +   R+G+ +  
Sbjct: 185 PS-DVLVVLDEAYIEYVTPQPE-KHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD 240

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 16/183 (8%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
              +A +        +    + LT G ++ I   +   A   A +++P   +   E  A 
Sbjct: 57  GNKLAAHHQ------VEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAK 110

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA-LVII-NPGNPCGNVYTYQHLQKIAE 210
            + ++V    +     W  D++ ++A     +   +V + NP NP G +     ++    
Sbjct: 111 IAGMKVTKVKM--LDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIA 168

Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMG---VFGSIVPVLTLGSISKRWIVPGWRLGWL 267
           +      M I DE Y    F N P        +      ++ L + SK   + G R+G+ 
Sbjct: 169 SKPA-NTMFIVDEAYAE--FVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYA 225

Query: 268 VTS 270
           V  
Sbjct: 226 VAH 228

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score = 64.5 bits (158), Expect = 7e-12
 Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 14/182 (7%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
           +  +A        YK+  +++ +  G  Q IE  +          L     F  YE  A 
Sbjct: 71  KSTLAQK------YKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAK 124

Query: 153 HSHLEVRHFDLLPAKGWEV-DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
               +        +    + +   +     +    + +  P NP G         +  + 
Sbjct: 125 QCGAKCYK---TQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKG 181

Query: 212 AKKLGIMVIADEVYDHLAFGNTP---FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
             +   +V+ D  Y+  A          P  +      VL LG+ SK + + G R+G+ +
Sbjct: 182 VNE-DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240

Query: 269 TS 270
            +
Sbjct: 241 AN 242

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score = 61.0 bits (149), Expect = 9e-11
 Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 21/178 (11%)

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
            R +A++      +    D++ L  G  +  + I           +   PGF  Y AR  
Sbjct: 57  MRKLAEH------FSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIA 108

Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
            S L      L       +D +            +V+ NP NP G   +   L ++ +  
Sbjct: 109 VSGLRHFEIGL--TDDLLLDPND--LAQVSRDDCVVLANPSNPTGQALSAGELDQLRQ-- 162

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
            + G ++I DE Y    + +     +    + +   +    SK + + G RLG L   
Sbjct: 163 -RAGKLLI-DETYVD--YSSFRARGLAYGENELVFRSF---SKSYGLAGLRLGALFGP 213

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 31/161 (19%), Positives = 47/161 (29%), Gaps = 18/161 (11%)

Query: 67  AVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124
            V AI+  +         Y S       R    +           P  + +  G  + + 
Sbjct: 44  VVKAILEELGPDGAALRIYPSASS-QKLREVAGELYG------FDPSWIIMANGSDEVLN 96

Query: 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184
            ++   A  G  I    P + YY   A      VR F L        D            
Sbjct: 97  NLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGL------TGDFRIAGFPERYEG 150

Query: 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
               +  P  P G       L+ I E A++   M++ DE Y
Sbjct: 151 KVFFLTTPNAPLG---PSFPLEYIDELARRCAGMLVLDETY 188

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 21/171 (12%)

Query: 67  AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126
            VD +   + S     Y  +         I  YL+ D    LS ++V +  G  +    I
Sbjct: 37  LVDEVFRRLNSDALRIYYDSPD-EELIEKILSYLDTD---FLSKNNVSVGNGADE----I 88

Query: 127 LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186
           + V+       +   P +  Y   A     +     L        DL  +  +       
Sbjct: 89  IYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK------DLR-IPEVNVGEGDV 141

Query: 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237
           + I NP NP G+V+  + +++I +T       V  DE Y    F    +V 
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAY--YEFHGESYVD 186

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus} Length = 412

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 13/77 (16%)

Query: 164 LPAKGWEV-----DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218
           L   G  V     + +AV       T A+ +    NP   V     L+ +A  A++ G+ 
Sbjct: 116 LSLMGVTVRYVDPEPEAVREALSAKTRAVFVETVANPALLVP---DLEALATLAEEAGVA 172

Query: 219 VIADEVYDHLAFGNTPF 235
           ++ D       FG    
Sbjct: 173 LVVDN-----TFGAAGA 184

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 26/144 (18%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA 151
               +  +L  D           +T G  +A   ++  LA+  A +++           +
Sbjct: 59  IHNQLPKFLGCD--------VARVTNGAREAKFAVMHSLAKKDAWVVMDE-----NCHYS 105

Query: 152 TH-----SHLEVRHFDLLPAKGWEVDLDAVEALADENT----VALVIIN-PGNPCGNVYT 201
           ++     + L +          + +  +      +E      V L +I  P    GN+  
Sbjct: 106 SYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNL-- 163

Query: 202 YQHLQKIAETAKKLGIMVIADEVY 225
              ++KIA+   +  + ++ +  Y
Sbjct: 164 -PDVKKIAKVCSEYDVPLLVNGAY 186

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes} Length = 430

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 164 LPAKGWEV------DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217
           LP+ G EV      D  AVE   DE T  L +    NP   V     L+ +++     GI
Sbjct: 142 LPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVA---DLEALSKVVHAKGI 198

Query: 218 MVIAD 222
            ++ D
Sbjct: 199 PLVVD 203

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A* Length = 398

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 122 AIEVILTVLARPGANILLPRP--G--FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
           AI   L  L + G +I+      G    +         + VR  D           + + 
Sbjct: 91  AITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA-------AKPEEIR 143

Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222
           A     T  + I  P NP  ++     ++ +A  A + G +++ D
Sbjct: 144 AAMRPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVD 185

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3 Length = 421

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 164 LPAKGWEV-------DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
           L   G EV         +   AL DE T A  + + GNP  N+     L+ +A+ A++ G
Sbjct: 118 LKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIP---DLEALAQAAREKG 174

Query: 217 IMVIAD 222
           + +I D
Sbjct: 175 VALIVD 180

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A* Length = 398

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 14/105 (13%)

Query: 122 AIEVILTVLARPGANILLPRP--G--FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
           AI   L  L RPG  +LL     G  F +         +++RH D+        DL A+E
Sbjct: 92  AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144

Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222
           A     T  +   +P NP  ++     +  +A+ A+K G  V+ D
Sbjct: 145 AAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVD 186

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis} Length = 414

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 18/107 (16%)

Query: 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV------DLDA 175
           A+   L  L   G  ++  R  F      +          ++LP  G +       DL  
Sbjct: 108 AVFTSLGALLGAGDRLVAARSLFG-----SCFVVCS----EILPRWGVQTVFVDGDDLSQ 158

Query: 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222
            E      T A+    P NP  ++     +  + E A   G  V+ D
Sbjct: 159 WERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLD 202

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A* Length = 415

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 14/107 (13%), Positives = 33/107 (30%), Gaps = 16/107 (14%)

Query: 122 AIEVILTVLARPGANILLP----RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
           A+   +      G ++L+      P   +     +   +    FD L           + 
Sbjct: 109 AVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-------IGADIV 161

Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIAD 222
                NT  + + +PG+    V     +  I    + +    +++ D
Sbjct: 162 KHLQPNTKIVFLESPGSITMEV---HDVPAIVAAVRSVVPDAIIMID 205

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 6e-04
 Identities = 55/354 (15%), Positives = 106/354 (29%), Gaps = 114/354 (32%)

Query: 24  SGITVRGVLNSLLENLNKNDTRPLIP--LGHGDPSAFPS--FRTASVAVDAIVHSVRS-- 77
           +  T    L+     L  ++ + L+   L    P   P     T    +  I  S+R   
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDC-RPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 78  ARFNCYSSTVGILPARRAIADYLN-------RDLPYKLS--PDDVYLTLGC--------- 119
           A ++     V        I   LN       R +  +LS  P   ++             
Sbjct: 342 ATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Query: 120 TQAIEVILTVLARPGANILLPRPGFPYY---------------EARATHSHLEVRHFDLL 164
              + V++  L +     L+ +                        A H  + V H+++ 
Sbjct: 401 KSDVMVVVNKLHKYS---LVEKQPKESTISIPSIYLELKVKLENEYALHRSI-VDHYNIP 456

Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ---KIAETAKKLGIMVIA 221
             K ++ D                  +   P  + Y Y H+    K  E  +++ +    
Sbjct: 457 --KTFDSD------------------DLIPPYLDQYFYSHIGHHLKNIEHPERMTLF--- 493

Query: 222 DEVYDHLAFGNTPFV---------PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
             V+  L F    F+              GSI+  L      K +I           +DP
Sbjct: 494 RMVF--LDFR---FLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD---------NDP 539

Query: 273 NGILQDSGIVDSIKSFL-----NISSDPAT-FIQ----------FLKSSRKLKR 310
               +   +V++I  FL     N+     T  ++          F ++ ++++R
Sbjct: 540 ----KYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.98
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.98
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.97
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.97
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.96
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.95
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.95
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.95
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.94
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.94
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.94
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.94
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.94
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.94
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.94
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.93
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.93
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.93
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.93
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.93
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.92
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.92
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.92
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.92
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.92
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.92
1svv_A	359	Threonine aldolase; structural genomics, structura	99.92
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.92
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.92
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.92
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.92
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.92
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.92
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.92
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.92
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.91
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.91
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.91
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.91
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.91
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.91
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.91
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.9
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.9
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.9
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.9
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.9
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.9
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.9
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.9
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.9
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.9
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.9
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.9
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.9
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.89
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.89
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.89
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.89
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.89
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.89
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.89
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.89
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.89
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.89
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.89
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.89
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.89
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.89
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.89
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.89
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.89
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.89
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.88
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.88
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.88
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.88
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.88
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.88
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.88
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.88
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.88
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.88
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.88
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.88
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.87
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.87
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.87
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.87
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.87
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.87
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.87
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.87
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.87
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.87
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.87
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.87
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.87
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.86
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.86
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.86
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.86
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.86
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.86
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.86
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.86
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.86
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.86
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.85
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.85
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.85
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.85
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.85
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.85
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.85
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.85
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.85
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.85
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.85
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.84
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.84
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.84
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.84
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.84
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.83
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.83
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.83
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.83
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.83
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.81
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.81
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.81
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.8
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.8
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.79
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.79
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.78
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.77
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.76
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.75
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.6
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.74
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.74
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.73
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.71
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.7
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.7
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.67
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.65
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.46
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.44
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.43
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.36
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.32
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.2
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.09
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.04
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.03
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.01
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	85.65
2yvq_A	143	Carbamoyl-phosphate synthase; conserved hypothetic	81.83
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	81.03

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=7.5e-42  Score=314.20  Aligned_cols=276  Identities=22%  Similarity=0.401  Sum_probs=239.3

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|.+++.++++.++.+.....+...  .++++|+|+.|+|+    +++++.+.+++.+.+.... ..|++..|..++|++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~   76 (385)
T 1b5p_A            4 LSRRVQAMKPSATVAVNAKALELRR--QGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREA   76 (385)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred             hhhHHhhcCcchHHHHHHHHHHHHh--cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence            5778999999999888776544322  35789999999986    5678899999988876543 479887899999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..+++++|++|+|+++++++++++++++||+|+++.|+|..+...++..|.+++.++.+++++|.+|+++
T Consensus        77 ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  156 (385)
T 1b5p_A           77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER  156 (385)
T ss_dssp             HHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence            99999988888888999999999999999999999999999999999999999999999999999998765678899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +++++++++++|++++||||||.++|.+++++|+++|+++|++||+||+|+++.+++ +..++..+.. +++++++||||
T Consensus       157 l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK  234 (385)
T 1b5p_A          157 VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAK  234 (385)
T ss_dssp             HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTT
T ss_pred             HHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechh
Confidence            999998888999999999999999999999999999999999999999999998876 5556666655 78999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      .|+++|+|+||+++++        +++++++..... ..+++.+.|.++..++.
T Consensus       235 ~~~~~G~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~  280 (385)
T 1b5p_A          235 AFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALT  280 (385)
T ss_dssp             TTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred             hcCCcccceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHh
Confidence            9999999999999853        578888776653 45678999998877553

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=2.1e-41  Score=315.54  Aligned_cols=295  Identities=35%  Similarity=0.701  Sum_probs=238.1

Q ss_pred             CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcC
Q 020968            9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG   88 (319)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g   88 (319)
                      .+.|.+.+|.. ...+++.||++++.+...  ..++.++|+|+.|+|+....+++++.+.+++.+.+.......|++..|
T Consensus        21 ~~~w~~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g   97 (427)
T 3dyd_A           21 QSMWSVRPSDM-AKKTFNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIG   97 (427)
T ss_dssp             ---CCCCCCC-----------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTC
T ss_pred             ccccCcchhhH-hhcccchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCC
Confidence            45799988854 444556799888766321  233567899999998755567899999999999987766668998889


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG  168 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  168 (319)
                      ..++|+++++++.+. +..+++++|++|+|+++|+..++..++++||+|+++.|+|..+...++..|.+++.++.++..+
T Consensus        98 ~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  176 (427)
T 3dyd_A           98 FLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKS  176 (427)
T ss_dssp             CHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGT
T ss_pred             cHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccC
Confidence            999999999999764 6667889999999999999999999999999999999999999999999999999999877777


Q ss_pred             CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeE
Q 020968          169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL  248 (319)
Q Consensus       169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi  248 (319)
                      +.+|++++++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++..+.++..+....+++
T Consensus       177 ~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi  256 (427)
T 3dyd_A          177 WEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPIL  256 (427)
T ss_dssp             TEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEE
T ss_pred             CCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEE
Confidence            88999999999988889999999999999999999999999999999999999999999999887777777777777899


Q ss_pred             EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      +++|+||.|+++|+|+||++++++.... .+++++.++.......+++++.|.++..++.
T Consensus       257 ~~~S~sK~~~~~G~riG~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~  315 (427)
T 3dyd_A          257 SCGGLAKRWLVPGWRLGWILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGALKSILC  315 (427)
T ss_dssp             EEEESTTTSSCGGGCCEEEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred             EEeeccccCCCcCcceEEEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence            9999999999999999999998643222 1246666766554446788999999888554

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=1.4e-40  Score=307.27  Aligned_cols=281  Identities=14%  Similarity=0.094  Sum_probs=221.4

Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHh-hcCCCCCCCCCcCCHHHHHH
Q 020968           18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSV-RSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~-~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++++.++++.|+.+.+.+.+    ...+++|+|+.|.+ +..+.+++++.+.++.. .+ ......+|++..|.++||++
T Consensus         6 ~~~~~~~~~~i~~~~~~~~~----~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a   80 (405)
T 3k7y_A            6 SSLENIEVDNILKTAREFKE----DTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL   80 (405)
T ss_dssp             GGCCCCCCCHHHHHHHHHTT----SSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred             hcCCCCCCChHHHHHHHHhc----CCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence            36788889999988876643    23578999999973 32233567899999877 43 33445689999999999999


Q ss_pred             HHHHHhhhCCCCCCCCc--EEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           96 IADYLNRDLPYKLSPDD--VYLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~--i~~~~G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      +++++.+..+..+++++  +++|+|+++|+.+++..+.+  + |+|++++|+|..|...++..|.+++.++..+++++++
T Consensus        81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  159 (405)
T 3k7y_A           81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI  159 (405)
T ss_dssp             HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred             HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence            99999776665566665  59999999999999999987  8 9999999999999999999999999999855567899


Q ss_pred             CHHHHHhhhcc--CceEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC--CCCCccc-CCCC
Q 020968          172 DLDAVEALADE--NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP--FVPMGVF-GSIV  245 (319)
Q Consensus       172 d~~~l~~~l~~--~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~~~-~~~~  245 (319)
                      |++.+++.+.+  .+++++++.| |||||.+++.+++++|+++|+++|++||+||+|.++.+++..  ..++..+ ...+
T Consensus       160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~  239 (405)
T 3k7y_A          160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI  239 (405)
T ss_dssp             CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTC
T ss_pred             CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCC
Confidence            99999998863  4567777765 899999999999999999999999999999999999886422  1122222 2346


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH----Hhh-hhcCCcchHHHHHHHHHHhc
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK----SFL-NISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~q~~~~~~l~~  309 (319)
                      ++|+++||||+|+++|+|+||++++..+     +++++++.    ... ..+.+++.+.|.+++.++.+
T Consensus       240 ~~i~~~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~  303 (405)
T 3k7y_A          240 AFSVCQSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNN  303 (405)
T ss_dssp             CEEEEEECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHC
T ss_pred             cEEEEeeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCC
Confidence            8999999999999999999999764321     34544443    332 23456678999888875543

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1.5e-39  Score=302.10  Aligned_cols=275  Identities=23%  Similarity=0.388  Sum_probs=240.1

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-CCCCCCCcCCHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPAR   93 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr   93 (319)
                      .++++++.++++.++.+.+...       ++++|+|+.|+|+    +++++.+.+++.+.+.... ...|++..|..++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr   73 (422)
T 3fvs_A            5 LQARRLDGIDYNPWVEFVKLAS-------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLT   73 (422)
T ss_dssp             CSCGGGTTCCCCHHHHHHHHHH-------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHH
T ss_pred             hHHHHhhccCccHHHHHHHHhh-------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHH
Confidence            3577888999999988876543       5789999999976    6889999999999887654 45899888999999


Q ss_pred             HHHHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-------
Q 020968           94 RAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-------  165 (319)
Q Consensus        94 ~~ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-------  165 (319)
                      +++++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.++       
T Consensus        74 ~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~  153 (422)
T 3fvs_A           74 KILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGE  153 (422)
T ss_dssp             HHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSS
T ss_pred             HHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccc
Confidence            99999999888888888 7999999999999999999999999999999999999999999999999999875       


Q ss_pred             ---CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          166 ---AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       166 ---~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                         ..+|.+|++++++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+.
T Consensus       154 ~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  233 (422)
T 3fvs_A          154 LGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLP  233 (422)
T ss_dssp             CCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGST
T ss_pred             cccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcc
Confidence               23577999999999988899999999999999999999999999999999999999999999999887666666665


Q ss_pred             C-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          243 S-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       243 ~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      . .+++++++|+||.|+++|+|+||+++++        ++++.+..... ...+++++.|.++..++.
T Consensus       234 ~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  293 (422)
T 3fvs_A          234 GMWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFE  293 (422)
T ss_dssp             TTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             cccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHh
Confidence            3 4689999999999999999999999854        57777776655 355678899999888654

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=1.8e-39  Score=304.25  Aligned_cols=278  Identities=19%  Similarity=0.280  Sum_probs=237.7

Q ss_pred             CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCC
Q 020968            9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSST   86 (319)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~   86 (319)
                      ...|..++|++.+.+.++.+|.+++...       .+++|+|+.|.|+.  .+.+++.+.+++.+.+...  ...+|++.
T Consensus        47 ~~~~~~~~s~~~~~~~~s~~~~~~~~~~-------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~  117 (448)
T 3aow_A           47 LGDVERFFSKKALEMRASEVRELLKLVE-------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTT  117 (448)
T ss_dssp             TSCGGGGCCHHHHHCCCCHHHHHHHHHH-------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCT
T ss_pred             ccchHHHhhHHHhcCCCcHHHHHHHhcc-------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCC
Confidence            3568888899999999999999886442       56899999999872  2457888999998887653  23579988


Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA  166 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  166 (319)
                      .|..+||+++++++.+.+|.. ++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++
T Consensus       118 ~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~  196 (448)
T 3aow_A          118 KGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE  196 (448)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred             CCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC
Confidence            899999999999997777766 7899999999999999999999999999999999999999999999999999998642


Q ss_pred             CCCcCCHHHHHhhhc----c--CceEE-EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc
Q 020968          167 KGWEVDLDAVEALAD----E--NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       167 ~~~~~d~~~l~~~l~----~--~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                         ++|++.|++.++    +  ++++| ++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++..+.++.
T Consensus       197 ---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~  273 (448)
T 3aow_A          197 ---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK  273 (448)
T ss_dssp             ---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred             ---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence               489999999887    5  67887 4689999999999999999999999999999999999999998876666777


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      .++..+++++++||||.|+ +|+|+||++++.        ++++++...... ..+++++.|.++..++.
T Consensus       274 ~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~  334 (448)
T 3aow_A          274 ALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--------GIIRKMEIAKQSTDLCTNVFGQVVAWRYVD  334 (448)
T ss_dssp             GGCTTSCEEEEEESTTTTC-GGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEccchhhcc-ccccEEEEEeCH--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence            7776678999999999998 999999999863        588888766543 45678999999888553

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=7e-39  Score=295.28  Aligned_cols=281  Identities=20%  Similarity=0.321  Sum_probs=234.0

Q ss_pred             chHHHHhc--ccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC---CCCCCCCcCCH
Q 020968           16 ANEELKTA--SGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR---FNCYSSTVGIL   90 (319)
Q Consensus        16 ~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~Y~~~~g~~   90 (319)
                      +|++++++  .++.++.++....+..+..++.++|+|+.|+|+    +++++.+.+++.+.+....   ...|++..|..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~   79 (398)
T 3ele_A            4 VNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDV   79 (398)
T ss_dssp             SCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCH
T ss_pred             hhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCCCCcH
Confidence            57788887  688999988765544444456789999999876    5788999999999887632   45798888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCC
Q 020968           91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW  169 (319)
Q Consensus        91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  169 (319)
                      ++|+++++++.+.+|..+++++|++|+|+++++..++++++++| |+|+++.|+|..+...++..|.+++.++.++ +++
T Consensus        80 ~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~  158 (398)
T 3ele_A           80 ETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHF  158 (398)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTS
T ss_pred             HHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCC
Confidence            99999999999888888899999999999999999999999999 9999999999999999999999999999864 468


Q ss_pred             cCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH------cCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK------LGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       170 ~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      .+|+++++++++++++++++++|+||||.+++.+++++|+++|++      +|+++|+||+|.++.+++...+...  ..
T Consensus       159 ~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~  236 (398)
T 3ele_A          159 QIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT--KY  236 (398)
T ss_dssp             SCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG--GT
T ss_pred             cCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH--hh
Confidence            899999999998889999999999999999999999999999999      9999999999999998765433332  23


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh--cCCcchHHHHHHHH
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQFLKSS  305 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~  305 (319)
                      .+++++++|+||.|+++|+|+||++++++...  ...+...+......  ...++.+.|.+++.
T Consensus       237 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  298 (398)
T 3ele_A          237 YDNTLVCYSYSKSLSLPGERIGYVLVPDEVYD--KAELYAAVCGAGRALGYVCAPSLFQKMIVK  298 (398)
T ss_dssp             CSSEEEEEESTTTSSCTTTCCEEEECCTTSTT--HHHHHHHHHHHHHHTTCCCSCHHHHHHHTT
T ss_pred             cCCeEEEEehhhcCCCccceeEEEEEcchhhh--HHHHHHHHHHHhhhccccCCCHHHHHHHHH
Confidence            46789999999999999999999998764211  11244444443332  34567788888776

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=6.5e-39  Score=297.29  Aligned_cols=291  Identities=29%  Similarity=0.558  Sum_probs=235.9

Q ss_pred             CCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCH
Q 020968           11 QWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL   90 (319)
Q Consensus        11 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~   90 (319)
                      +|.++.|...+. ..+.++.+.+...+.   ....++|+|+.|+|+.++.+++++.+.+++.+.+.......|++..|..
T Consensus         3 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~   78 (416)
T 1bw0_A            3 SWDVSMSNHAGL-VFNPIRTVSDNAKPS---PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP   78 (416)
T ss_dssp             -CCCCCCHHHHT-CCCHHHHHHHTCCCC---CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCH
T ss_pred             ccccCchhhhhc-cccHHHHHHHHHHHh---hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCH
Confidence            599988864444 445677766533211   1236799999999865445789999999999988765556898878999


Q ss_pred             HHHHHHHHHHhh------hCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           91 PARRAIADYLNR------DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        91 ~lr~~ia~~~~~------~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      ++|+++++++.+      ..|..+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+
T Consensus        79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~  158 (416)
T 1bw0_A           79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCR  158 (416)
T ss_dssp             HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecC
Confidence            999999999982      25666788999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC----CCCCCcc
Q 020968          165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT----PFVPMGV  240 (319)
Q Consensus       165 ~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~----~~~~~~~  240 (319)
                      +++++.+|++++++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++.    ...++..
T Consensus       159 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~  238 (416)
T 1bw0_A          159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD  238 (416)
T ss_dssp             GGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred             cccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence            655678999999999988889999999999999999999999999999999999999999999988775    4555655


Q ss_pred             cCCCCCeEEEecCccccCCCcceeeEEEeeCC-CCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP-NGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      +....++++++|+||.|+++|+|+||++++++ .. .  ..+...++.......+++++.|.++..++.
T Consensus       239 ~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  304 (416)
T 1bw0_A          239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGN-G--PSFLEGLKRVGMLVCGPCTVVQAALGEALL  304 (416)
T ss_dssp             SCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCS-C--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecchhhCCCCCceEEEEEeeCchhh-H--HHHHHHHHHHhccccCCCcHHHHHHHHHHh
Confidence            65556789999999999999999999999764 21 1  124434444332334678899999888553

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=8.5e-39  Score=293.77  Aligned_cols=278  Identities=21%  Similarity=0.328  Sum_probs=236.9

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|++++.+.++.++.+.....+..  ..++++++|+.|+++    +++++.+.+++.+.+... ...|++..|..++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~   75 (388)
T 1j32_A            3 LAARVESVSPSMTLIIDAKAKAMK--AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREA   75 (388)
T ss_dssp             CCHHHHTSCCCSSTTTHHHHHHHH--TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred             hhhHhHhCCccHHHHHHHHHHHHH--hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence            467888888888888776555433  236789999999975    567899999999888654 3479888899999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..+++++|++|+|+++|+..++++++++||+|+++.|+|..+...++..|.+++.++.++++++.+|+++
T Consensus        76 la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  155 (388)
T 1j32_A           76 IAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQ  155 (388)
T ss_dssp             HHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHH
T ss_pred             HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHH
Confidence            99999887887788899999999999999999999999999999999999999999999999999988655567899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEecC
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSI  253 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~  253 (319)
                      +++.+++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++.++.++..+..  .++++++.|+
T Consensus       156 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  235 (388)
T 1j32_A          156 IRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGF  235 (388)
T ss_dssp             HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEES
T ss_pred             HHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeec
Confidence            99999888899999999999999999999999999999999999999999999887765556655543  4578999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      ||.++++|+|+||+++++        +++++++.... ...+++.+.|.++..++.
T Consensus       236 sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~  283 (388)
T 1j32_A          236 AKTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYE  283 (388)
T ss_dssp             TTTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred             hhccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence            999999999999999853        57777776654 345678889988776554

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=1.1e-38  Score=293.07  Aligned_cols=275  Identities=24%  Similarity=0.458  Sum_probs=236.0

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      ++|+++..++++.++.+.+...+      .+++|+|+.|+++    +++++.+.+++.+.+.... ..|++..|..++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~   70 (389)
T 1gd9_A            2 ALSDRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLLELRE   70 (389)
T ss_dssp             CHHHHHHHSCCCHHHHHHHHHHT------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred             chhhHhHhCChhHHHHHHHHHhh------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcHHHHH
Confidence            35888999999999988876642      2689999999976    5678999999999886643 47988779999999


Q ss_pred             HHHHHHhhhCCCCCCCCc-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           95 AIADYLNRDLPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~-i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      ++++++.+.+|..+++++ +++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.++++++.+|+
T Consensus        71 ~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  150 (389)
T 1gd9_A           71 AIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNV  150 (389)
T ss_dssp             HHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCH
T ss_pred             HHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCH
Confidence            999999887787778889 9999999999999999999999999999999999999999999999999986545678999


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEec
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS  252 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s  252 (319)
                      +.+++.+++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++.++.++..+.. .+++++++|
T Consensus       151 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  230 (389)
T 1gd9_A          151 DELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNG  230 (389)
T ss_dssp             HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEE
T ss_pred             HHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEec
Confidence            9999999888899999999999999999999999999999999999999999999887654445555543 467899999


Q ss_pred             CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      +||.++++|+|+||+++++        +++++++..... ..+++++.|.++..++.
T Consensus       231 ~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~  279 (389)
T 1gd9_A          231 FSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALK  279 (389)
T ss_dssp             STTTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHT
T ss_pred             ChhhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHh
Confidence            9999999999999999853        578888776553 45678899988877553

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=3.6e-39  Score=298.26  Aligned_cols=272  Identities=21%  Similarity=0.346  Sum_probs=235.1

Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      ++++.++++.++.+.+..       .++++|+|+.|+|+    +++++.+.+++.+.+.......|++..|..++|++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la   71 (410)
T 3e2y_A            3 KRIEGLDSNVWVEFTKLA-------ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALS   71 (410)
T ss_dssp             GGGTTCCCCHHHHTTTTT-------TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHH
T ss_pred             hhhccCCccHHHHHHHHh-------cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHH
Confidence            466777777777765422       36789999999976    6889999999999987655668998888999999999


Q ss_pred             HHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC---------CC
Q 020968           98 DYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP---------AK  167 (319)
Q Consensus        98 ~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~  167 (319)
                      +++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.++         ..
T Consensus        72 ~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~  151 (410)
T 3e2y_A           72 CLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSS  151 (410)
T ss_dssp             HHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGG
T ss_pred             HHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccccccccc
Confidence            9999888888888 8999999999999999999999999999999999999999999999999998763         24


Q ss_pred             CCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCC
Q 020968          168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVP  246 (319)
Q Consensus       168 ~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~  246 (319)
                      ++.+|++++++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+. ..++
T Consensus       152 ~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  231 (410)
T 3e2y_A          152 DWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER  231 (410)
T ss_dssp             GEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred             CCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCe
Confidence            567899999999988899999999999999999999999999999999999999999999998877666666654 3468


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      +++++|+||.|+++|+|+||+++++        ++++.++.... ...+++++.|.+++.++.
T Consensus       232 ~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  286 (410)
T 3e2y_A          232 TITIGSAGKTFSVTGWKLGWSIGPA--------HLIKHLQTVQQNSFYTCATPLQAALAEAFW  286 (410)
T ss_dssp             EEEEEEHHHHSSCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             EEEEecchhhcCCCCceEEEEEECH--------HHHHHHHHHHHhhccCCChHHHHHHHHHHH
Confidence            9999999999999999999999853        57777776655 355678999998888554

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.4e-38  Score=294.81  Aligned_cols=280  Identities=17%  Similarity=0.284  Sum_probs=220.7

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++.+++.+.++.++.+.....+ +. ..+.++|+|+.|+++    +++++.+.+++.+.+.......|++..|..++|++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~   83 (412)
T 2x5d_A           10 RFARIDRLPPYVFNITAELKMA-AR-RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRA   83 (412)
T ss_dssp             -----------CHHHHHHHHHH-HH-HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHH
T ss_pred             hhHHHhhcCchHHHHHHHHHHH-Hh-hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHH
Confidence            4667777777777776654432 22 246789999999975    56789999999988765434579878899999999


Q ss_pred             HHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      +++++.+.+|..+++ ++|++|+|+++++.+++++++++||+|+++.|+|..+...++..|.+++.++.+++++|.+|++
T Consensus        84 ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  163 (412)
T 2x5d_A           84 ISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELE  163 (412)
T ss_dssp             HHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHH
Confidence            999998877877777 7999999999999999999999999999999999999999999999999999875546678999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI  253 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~  253 (319)
                      .+++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++..+.++..+.. .+++++++|+
T Consensus       164 ~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~  243 (412)
T 2x5d_A          164 RAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTL  243 (412)
T ss_dssp             HHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEEC
T ss_pred             HHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecC
Confidence            999999888899999999999999999999999999999999999999999999987655556655543 4678999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      ||.|+++|+|+||++++.        +++++++.... ...+++++.|.++..++..
T Consensus       244 sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  292 (412)
T 2x5d_A          244 SKSYNMAGWRIGFMVGNP--------ELVSALARIKSYHDYGTFTPLQVAAIAALEG  292 (412)
T ss_dssp             C-CCSCTTSCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS
T ss_pred             ccccCCcccceEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence            999989999999999842        57888877655 3567789999988875543

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=1.4e-38  Score=292.95  Aligned_cols=276  Identities=22%  Similarity=0.338  Sum_probs=233.2

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +.+++.+.++.++.+.+.. +.+...++.++|+|+.|+++    +++++.+.+++.+.+.  ....|++..|..++|+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~l   75 (396)
T 3jtx_A            3 NTLLKQLKPYPFARLHEAM-QGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQAC   75 (396)
T ss_dssp             HHHHHHCCSCHHHHHHHHT-TTCCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHH
T ss_pred             hhhhccCCCChHHHHHHHH-HhhhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHH
Confidence            5678888888888877533 44444567899999999976    6789999999998875  345899888999999999


Q ss_pred             HHHHhhhCCCC-CCCC-cEEEeCCHHHHHHHHHHHhcCCC-----CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCC
Q 020968           97 ADYLNRDLPYK-LSPD-DVYLTLGCTQAIEVILTVLARPG-----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW  169 (319)
Q Consensus        97 a~~~~~~~g~~-~~~~-~i~~~~G~t~ai~~~~~~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  169 (319)
                      ++++.+.+|.. ++++ +|++|+|+++++..++++++++|     |+|+++.|+|..+...++..|.+++.++. +.+++
T Consensus        76 a~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~  154 (396)
T 3jtx_A           76 ANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSF  154 (396)
T ss_dssp             HHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTC
T ss_pred             HHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCC
Confidence            99999888877 7788 99999999999999999999996     79999999999999999999999999998 45677


Q ss_pred             cCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc----cC-CC
Q 020968          170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV----FG-SI  244 (319)
Q Consensus       170 ~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~----~~-~~  244 (319)
                      .+|++.+++++.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.+...    +. ..
T Consensus       155 ~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (396)
T 3jtx_A          155 NPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSR  234 (396)
T ss_dssp             CCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCC
T ss_pred             ccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhccccc
Confidence            89999999998888999999999999999999999999999999999999999999999887743333211    11 24


Q ss_pred             CCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       245 ~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      ++++++.|+||.|+++|+|+||++++.        ++++.++..... ..+++++.|.++..++.
T Consensus       235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  291 (396)
T 3jtx_A          235 QKLLMFTSLSKRSNVPGLRSGFVAGDA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWD  291 (396)
T ss_dssp             TTEEEEEESTTTSSCGGGCCEEEEECH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             CcEEEEeccccccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhC
Confidence            679999999999999999999998743        588888776653 55778999999888554

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-38  Score=298.35  Aligned_cols=274  Identities=23%  Similarity=0.357  Sum_probs=227.2

Q ss_pred             cccccHHHHHHHHHHHh--hhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHH
Q 020968           23 ASGITVRGVLNSLLENL--NKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL  100 (319)
Q Consensus        23 ~~~~~i~~~~~~~~~~~--~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~  100 (319)
                      ++++.++.+.+...+.-  .+..++++|+|+.|.|+    +++++.+.+++.+++......+|++..|..++|+++++++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l  108 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLY  108 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHH
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHH
Confidence            55666666654332110  01236789999999976    5688999999999887533458998889999999999999


Q ss_pred             hhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC----------CCc
Q 020968          101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK----------GWE  170 (319)
Q Consensus       101 ~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~  170 (319)
                      .+.+|..+++++|++|+|+++|+..++++++++||+|+++.|+|..+...++..|.+++.++.++.+          +|.
T Consensus       109 ~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~  188 (447)
T 3b46_A          109 SPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT  188 (447)
T ss_dssp             TTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSE
T ss_pred             HHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcc
Confidence            8888888888999999999999999999999999999999999999999999999999999886543          578


Q ss_pred             CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC--CCCCeE
Q 020968          171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG--SIVPVL  248 (319)
Q Consensus       171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~~~vi  248 (319)
                      +|++++++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++ +..++..+.  ..++++
T Consensus       189 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i  267 (447)
T 3b46_A          189 IDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTL  267 (447)
T ss_dssp             ECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEE
T ss_pred             cCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEE
Confidence            99999999998888999999999999999999999999999999999999999999998876 334444441  236789


Q ss_pred             EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      +++|+||.|+++|+|+||+++.+       +++++.+..... ...+++++.|.+++.++.
T Consensus       268 ~i~S~sK~~~~~G~riG~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~  321 (447)
T 3b46_A          268 TVGSAGKSFAATGWRIGWVLSLN-------AELLSYAAKAHTRICFASPSPLQEACANSIN  321 (447)
T ss_dssp             EEEEHHHHTTCTTSCCEEEECSC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             EEecCchhcCCcchhhEEEEeCC-------HHHHHHHHHHHhhccCCCChHHHHHHHHHHh
Confidence            99999999999999999999832       257887776554 345678899988877553

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=2e-38  Score=291.66  Aligned_cols=271  Identities=20%  Similarity=0.310  Sum_probs=224.0

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++ +++.+.++.++.+++...+.-  .++.++|+|+.|+++    +++++.+.+++.+.+.... ..|++..|..++|++
T Consensus         5 ~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~   76 (391)
T 3h14_A            5 NS-SRSAVDPFIVMDVMEAARRAE--EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQR   76 (391)
T ss_dssp             CC-STTCCCCCTTHHHHHHHHHHH--HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHH
T ss_pred             hh-hHhhcCcchHHHHHHHHHHHH--hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHH
Confidence            34 677788888888887554322  246789999999976    6778999999999886543 479888899999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..+++++|++|+|+++|++.++++++++||+|+++.|+|..+...++..|.+++.++.+++++|.+|+++
T Consensus        77 ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  156 (391)
T 3h14_A           77 IARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPAD  156 (391)
T ss_dssp             HHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHH
T ss_pred             HHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence            99999988888889999999999999999999999999999999999999999999999999999999877778899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +++.   ++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++.. .+...+  .+++++++|+||
T Consensus       157 l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~--~~~~i~~~s~sK  230 (391)
T 3h14_A          157 FAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA-VTALEL--TDECYVINSFSK  230 (391)
T ss_dssp             HTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC-CCGGGT--CSSSEEEEESSS
T ss_pred             HHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC-cChhhc--CCCEEEEEechh
Confidence            9887   6889999999999999999999999999999999999999999999887753 233222  467899999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      .++++|+|+||+++++        ++++.++..... ..+++.+.|.++..++.
T Consensus       231 ~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  276 (391)
T 3h14_A          231 YFSMTGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD  276 (391)
T ss_dssp             TTCCTTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT
T ss_pred             ccCCccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC
Confidence            9999999999999864        467777766553 45678889988866443

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=1e-37  Score=286.97  Aligned_cols=276  Identities=24%  Similarity=0.370  Sum_probs=234.6

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      .+.+++.++++.++.+.+...+...  +++++|+|+.|+++    ++.++.+.+++.+.+.... ..|++..|..++|++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~   86 (389)
T 1o4s_A           14 VSRRISEIPISKTMELDAKAKALIK--KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREG   86 (389)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHH
T ss_pred             HHHHHhhcCccHHHHHHHHHHHHHh--cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence            4567889999999998876654432  36789999999975    5668999999998886543 478887789999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..++++++++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++++|.+|+++
T Consensus        87 la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  166 (389)
T 1o4s_A           87 IAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEE  166 (389)
T ss_dssp             HHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHH
Confidence            99999887787778899999999999999999999999999999999999999999999999999998654567899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSIS  254 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~s  254 (319)
                      +++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++ ...++..+.. .+++++++|+|
T Consensus       167 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~s  245 (389)
T 1o4s_A          167 VEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFS  245 (389)
T ss_dssp             HHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEEST
T ss_pred             HHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeech
Confidence            999998888999999999999999999999999999999999999999999988866 3334444433 46789999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      |+++++|+|+||+++++        +++++++..... ..+++++.|.++..++
T Consensus       246 K~~~~~G~r~G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l  291 (389)
T 1o4s_A          246 KSHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKAL  291 (389)
T ss_dssp             TTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHT
T ss_pred             hhcCCcccceEEEEeCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHH
Confidence            99989999999999853        577777766543 4567888898877744

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=2.2e-38  Score=294.41  Aligned_cols=281  Identities=17%  Similarity=0.167  Sum_probs=226.2

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCC---CCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHG---DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA   92 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l   92 (319)
                      ++++++..+++.|+.+...+.+.    ..+++|+|+.|   +|+  ...++++.+.+++.+.+.......|++..|.+++
T Consensus        24 ~~~~~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~l   97 (420)
T 4f4e_A           24 LFSAVELAPRDPILGLNEAFNAD----TRPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAY   97 (420)
T ss_dssp             TTTTCCCCCCCHHHHHHHHHHHC----CCSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHH
T ss_pred             HhhcCCcCCCChHHHHHHHHHhc----CCCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHH
Confidence            36688899999999998766542    35789999999   555  2245569999999998877555689998999999


Q ss_pred             HHHHHHHHhhhCCCCCCCC--cEEEeCCHHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968           93 RRAIADYLNRDLPYKLSPD--DVYLTLGCTQAIEVIL--TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG  168 (319)
Q Consensus        93 r~~ia~~~~~~~g~~~~~~--~i~~~~G~t~ai~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  168 (319)
                      |+++++++....+..++++  +|++|+|+++|+..++  .+++++||+|+++.|+|.++...++..|.+++.++..++++
T Consensus        98 r~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~  177 (420)
T 4f4e_A           98 DASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKT  177 (420)
T ss_dssp             HHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTT
T ss_pred             HHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeecccc
Confidence            9999999976544334677  8999999999999994  45678999999999999999999999999999999855567


Q ss_pred             CcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCCccc-CC
Q 020968          169 WEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVF-GS  243 (319)
Q Consensus       169 ~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~-~~  243 (319)
                      +.+|++.+++.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ ..
T Consensus       178 ~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~  257 (420)
T 4f4e_A          178 NGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAA  257 (420)
T ss_dssp             TEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHT
T ss_pred             CccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhc
Confidence            8899999999987   5678899999999999999999999999999999999999999999998752 22233333 24


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH----HHHhh-hhcCCcchHHHHHHHHHH
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS----IKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      .+++++++|+||.|+++|+|+||+++...+     ++++.+    ++... ..+..++.+.|.+++.++
T Consensus       258 ~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  321 (420)
T 4f4e_A          258 NLNVFVSSSFSKSFSLYGERVGALSIITDS-----KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVL  321 (420)
T ss_dssp             TCCEEEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHH
T ss_pred             CCCEEEEEeCCccCcCcCCCcEEEEEEcCC-----HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHh
Confidence            568999999999999999999999753321     234433    33332 234567889998888744

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=6.6e-38  Score=289.80  Aligned_cols=284  Identities=26%  Similarity=0.469  Sum_probs=229.9

Q ss_pred             CCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHH
Q 020968           13 GFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA   92 (319)
Q Consensus        13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~l   92 (319)
                      +.+++++++++.++.++.+. ... .+.. +++++|+|+.|++..+ .++.++.+.+++.+.+.... ..|++..|..++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l   83 (406)
T 1xi9_A            9 SIRASKRALSVEYAIRDVVL-PAR-ELEK-KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPEL   83 (406)
T ss_dssp             CCCCCHHHHTCCC--------CHH-HHHH-TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHH
T ss_pred             hhhHHHHHhcCChhHHHHHH-HHH-HHHH-cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHH
Confidence            36789999999999888877 443 3322 3678999999997310 15678999999998886543 478887889999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968           93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD  172 (319)
Q Consensus        93 r~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  172 (319)
                      |+++++++.+.+|..+++++|++|+|+++|+..++++++++||+|+++.|+|..+...++..|.+++.++.+++++|.+|
T Consensus        84 ~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d  163 (406)
T 1xi9_A           84 RKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPD  163 (406)
T ss_dssp             HHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEEC
T ss_pred             HHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCC
Confidence            99999999988888888999999999999999999999999999999999999999999999999999998654567899


Q ss_pred             HHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEe
Q 020968          173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLG  251 (319)
Q Consensus       173 ~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~  251 (319)
                      ++.+++.+++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++ .+.++..+. .++ +++++
T Consensus       164 ~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~  241 (406)
T 1xi9_A          164 IDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMN  241 (406)
T ss_dssp             HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEE
T ss_pred             HHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEe
Confidence            999999998888999999999999999999999999999999999999999999988843 334455554 566 89999


Q ss_pred             cCccccCCCcceeeEEE--eeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          252 SISKRWIVPGWRLGWLV--TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      |+||.++++|+|+||++  ++++.    ..+++++++.......+++++.|.++..++
T Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l  295 (406)
T 1xi9_A          242 GLSKVYFATGWRLGYMYFVDPENK----LSEVREAIDRLARIRLCPNTPAQFAAIAGL  295 (406)
T ss_dssp             ESTTTTCCGGGCCEEEEEECTTCT----THHHHHHHHHHHHHTCCSCSHHHHHHHHHH
T ss_pred             ccccccCCCccEEEEEEEecCchh----HHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence            99999989999999998  64310    014777777655432567889998888855

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.7e-37  Score=287.42  Aligned_cols=273  Identities=26%  Similarity=0.405  Sum_probs=229.7

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|++++.+.++.++.+.+...       ..++|+|+.|.++    +++++.+.+++.+.+... ...|++..|..++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~   70 (411)
T 2o0r_A            3 TVSRLRPYATTVFAEMSALAT-------RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRA   70 (411)
T ss_dssp             CCGGGGGGSSCHHHHHHHHHH-------TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred             hhhHhHhcCccHHHHHHHHhh-------cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence            356777777777766554332       4578999999875    567899999999988764 4579888889999999


Q ss_pred             HHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCH
Q 020968           96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDL  173 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~  173 (319)
                      +++++.+.+|..++++ +|++|+|+++|+..++++++++||+|+++.|+|..+...++..|.+++.++.+.+ .++.+|+
T Consensus        71 la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~  150 (411)
T 2o0r_A           71 IAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDA  150 (411)
T ss_dssp             HHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCH
T ss_pred             HHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCH
Confidence            9999988778777888 9999999999999999999999999999999999999999999999999987653 3567999


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEec
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS  252 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s  252 (319)
                      +.+++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++..+.++..+.. .++++++.|
T Consensus       151 ~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s  230 (411)
T 2o0r_A          151 DALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISS  230 (411)
T ss_dssp             HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEE
T ss_pred             HHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEee
Confidence            9999999888899999999999999999999999999999999999999999999887765556655543 467899999


Q ss_pred             CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      +||.++++|+|+||++++.        ++++.+..... ...+.+++.|.++..++.
T Consensus       231 ~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~  279 (411)
T 2o0r_A          231 AAKMFNCTGWKIGWACGPA--------ELIAGVRAAKQYLSYVGGAPFQPAVALALD  279 (411)
T ss_dssp             HHHHTTCTTTCEEEEECCH--------HHHHHHHHHHHHHTSCCCTTHHHHHHHHHH
T ss_pred             chhhcCCccceEEEEeeCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHh
Confidence            9999999999999999842        57777776554 344567788888777553

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=1.4e-37  Score=285.65  Aligned_cols=272  Identities=23%  Similarity=0.347  Sum_probs=226.4

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +++++.+..+.++.+.....       ..++|+|+.|.++    +++++.+.+++.+.+... ...|++..|..++|+++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~l   76 (386)
T 1u08_A            9 QSKLPQLGTTIFTQMSALAQ-------QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAI   76 (386)
T ss_dssp             CCSCCCCCCCHHHHHHHHHH-------HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred             chhhhcCCccHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHH
Confidence            33555565555555443221       3579999999975    567899999999988653 35788877899999999


Q ss_pred             HHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        97 a~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      ++++.+.+|..++++ +|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+.+ ++.+|+++
T Consensus        77 a~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~  155 (386)
T 1u08_A           77 AQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQE  155 (386)
T ss_dssp             HHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHH
T ss_pred             HHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHH
Confidence            999988778778888 9999999999999999999999999999999999999999999999999998543 57899999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSIS  254 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~s  254 (319)
                      +++.+++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++....++..+. ..+++++++|+|
T Consensus       156 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~s  235 (386)
T 1u08_A          156 FAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFG  235 (386)
T ss_dssp             HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHH
T ss_pred             HHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecch
Confidence            9999988889999999999999999999999999999999999999999999988776555554442 245789999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      |.|+++|+|+||+++++        +++++++.... ...+++++.|.++..++..
T Consensus       236 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  283 (386)
T 1u08_A          236 KTYHMTGWKVGYCVAPA--------PISAEIRKVHQYLTFSVNTPAQLALADMLRA  283 (386)
T ss_dssp             HHTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             hhcCCcccceEEEEcCH--------HHHHHHHHHHHhhccCCChHHHHHHHHHHhC
Confidence            99999999999999853        57777776654 3456788889888775543

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=1.9e-37  Score=288.67  Aligned_cols=277  Identities=22%  Similarity=0.365  Sum_probs=229.8

Q ss_pred             CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHH
Q 020968           14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILP   91 (319)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~   91 (319)
                      +++|.++..+..+.++.+.+...       .+++|+|+.|.++    +++++.+.+++.+.+...  ....|++..|..+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~   81 (429)
T 1yiz_A           13 FDLPKRYQGSTKSVWVEYIQLAA-------QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPR   81 (429)
T ss_dssp             CCSSSSCCCCTTCHHHHHHHHHH-------HHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHH
T ss_pred             cchhHHhhhCCchHHHHHHHHhc-------cCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHH
Confidence            44566666666555544433221       3579999999976    567899999999988652  2357888778999


Q ss_pred             HHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC---
Q 020968           92 ARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK---  167 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~---  167 (319)
                      +|+++++++.+.+|..++++ +|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+..+   
T Consensus        82 l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  161 (429)
T 1yiz_A           82 LVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGG  161 (429)
T ss_dssp             HHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSS
T ss_pred             HHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccc
Confidence            99999999988778777888 99999999999999999999999999999999999999999999999999986543   


Q ss_pred             -----CCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          168 -----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       168 -----~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                           +|.+|++.+++.+++++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.+..++..+.
T Consensus       162 ~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~  241 (429)
T 1yiz_A          162 TISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP  241 (429)
T ss_dssp             SEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGST
T ss_pred             cccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhcc
Confidence                 578999999999988889999999999999999999999999999999999999999999998776555665553


Q ss_pred             -CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          243 -SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       243 -~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                       ..++++++.|+||.|+++|+|+||+++++        ++++.+..... ...+.+++.|.++..++..
T Consensus       242 ~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  302 (429)
T 1yiz_A          242 GMWERTITIGSAGKTFSLTGWKIGWAYGPE--------ALLKNLQMVHQNCVYTCATPIQEAIAVGFET  302 (429)
T ss_dssp             TTGGGEEEEEEHHHHHTCGGGCCEEEESCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             CCcCceEEEecchhccCCCCcceEEEEeCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHhc
Confidence             34678999999999999999999999853        57777776554 3456788999888775543

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=6.1e-38  Score=290.03  Aligned_cols=275  Identities=19%  Similarity=0.280  Sum_probs=225.4

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +++++.++++.++.+.+...+    ..+.++|+|+.|+++    +++++.+.+++.+.+.......|++..|..++|+++
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~----~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i   94 (404)
T 2o1b_A           23 SNKLANIPDSYFGKTMGRKIE----HGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAI   94 (404)
T ss_dssp             CHHHHTSCCCTTC-------C----CCSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHH
T ss_pred             hhHhhhCCchHHHHHHHHHHh----cCCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence            667888888777766553321    235679999999976    567899999999987553344788877999999999


Q ss_pred             HHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           97 ADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        97 a~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      ++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.++ +++.+|+++
T Consensus        95 a~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~  173 (404)
T 2o1b_A           95 VDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSK  173 (404)
T ss_dssp             HHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGG
T ss_pred             HHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHH
Confidence            99998877877776 7999999999999999999999999999999999999999999999999999865 567789999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSIS  254 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~s  254 (319)
                      +++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ .+.++..+. ..+++++++|+|
T Consensus       174 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~s  252 (404)
T 2o1b_A          174 VDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLS  252 (404)
T ss_dssp             SCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEEST
T ss_pred             HHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecc
Confidence            998887778899999999999999999999999999999999999999999998866 333444443 235789999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      |.|+++|+|+||++++.        +++++++.... ...+++.+.|.++..++..
T Consensus       253 K~~g~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  300 (404)
T 2o1b_A          253 KGYNMSGFRVGFAVGNK--------DMIQALKKYQTHTNAGMFGALQDAAIYALNH  300 (404)
T ss_dssp             TTTTCGGGCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred             hhccCchhheEeEecCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence            99999999999998742        57888877655 3457789999988875533

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=1.3e-37  Score=287.09  Aligned_cols=279  Identities=15%  Similarity=0.151  Sum_probs=220.4

Q ss_pred             HHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968           20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD   98 (319)
Q Consensus        20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   98 (319)
                      +...+++.++...+.+.+    ...+++|+|+.|.| +.....+..+.+.+++.+........+|.+..|.+++|+++++
T Consensus         7 ~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   82 (401)
T 7aat_A            7 VEMGPPDPILGVTEAFKR----DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAE   82 (401)
T ss_dssp             CCCCCCCHHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCCCCChhHHHHHHHhh----CCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHH
Confidence            445566777777665543    34677999999997 5333344557888888877654345689988899999999999


Q ss_pred             HHhhhCCCCCCCCcEEE--eCCHHHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           99 YLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA---RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        99 ~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      ++.+.+|..+++++|++  |+|++++++.++..+.   ++||+|+++.|+|..+...++..|.+++.++.+..+++++|+
T Consensus        83 ~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  162 (401)
T 7aat_A           83 LALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDF  162 (401)
T ss_dssp             HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred             HhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCH
Confidence            99887777777999987  9999999999887765   899999999999999999999999999999986656788999


Q ss_pred             HHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC--CCCCccc-CCCCCe
Q 020968          174 DAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP--FVPMGVF-GSIVPV  247 (319)
Q Consensus       174 ~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~~~-~~~~~v  247 (319)
                      +.+++.+.   ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..  ..++..+ ...+++
T Consensus       163 ~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~  242 (401)
T 7aat_A          163 TGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDV  242 (401)
T ss_dssp             HHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCC
T ss_pred             HHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcE
Confidence            97777664   46788999999999999999999999999999999999999999999876531  1122222 345678


Q ss_pred             EEEecCccccCCCcceeeEEEeeCCCCCccchH----HHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG----IVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       248 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      |+++|+||.|+++|+|+||++++..+     ++    +...++.... ...+++.+.|.+++.++
T Consensus       243 i~~~S~sK~~~~~G~RiG~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  302 (401)
T 7aat_A          243 VLSQSYAKNMGLYGERAGAFTVICRD-----AEEAKRVESQLKILIRPMYSNPPMNGARIASLIL  302 (401)
T ss_dssp             EEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             EEEecCCcccccccCceEEEEEEeCC-----HHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHh
Confidence            99999999999999999999874322     23    4455555443 34566778888877644

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.2e-37  Score=285.13  Aligned_cols=252  Identities=20%  Similarity=0.294  Sum_probs=213.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~  121 (319)
                      ++.++|+|+.|+++    +++++.+.+++.+.+.......|++..+..++|+++++++.+.+|..++++ +|++|+|+++
T Consensus        23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~   98 (376)
T 2dou_A           23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE   98 (376)
T ss_dssp             TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred             cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence            46789999999975    567899999999988654455788766889999999999988778777776 9999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccC
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  201 (319)
                      ++..++++++++||+|+++.|+|..+...++..|.+++.++.  .+++.+|++++++.++++++++++++|+||||.+++
T Consensus        99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  176 (376)
T 2dou_A           99 GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD  176 (376)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence            999999999999999999999999999999999999999887  456778999999888777899999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      .+++++|+++|+++|+++|+||+|..+.+++.....+......+++++++|+||.|+++|+|+||++++.        ++
T Consensus       177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~  248 (376)
T 2dou_A          177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------EA  248 (376)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------HH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------HH
Confidence            9999999999999999999999999998866322222222334678999999999999999999998743        57


Q ss_pred             HHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          282 VDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      +++++..... ..+++++.|.++..++.
T Consensus       249 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~  276 (376)
T 2dou_A          249 LARLERVKGVIDFNQYAGVLRMGVEALK  276 (376)
T ss_dssp             HHHHHHHHHHHCCCSCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence            8888776553 44678899988887553

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=2.4e-37  Score=287.87  Aligned_cols=276  Identities=19%  Similarity=0.231  Sum_probs=223.0

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHH---------HHHhhcCCCCC
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAI---------VHSVRSARFNC   82 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~---------~~~~~~~~~~~   82 (319)
                      |...+|++++.++++.++.+.+...+     ..+++|+|+.|.|+..  ..+...+..++         .....  ...+
T Consensus         3 ~~~~~s~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~p~~~--~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~   73 (425)
T 2r2n_A            3 YARFITAASAARNPSPIRTMTDILSR-----GPKSMISLAGGLPNPN--MFPFKTAVITVENGKTIQFGEEMMK--RALQ   73 (425)
T ss_dssp             GGGGSCHHHHTCCCCSGGGHHHHHHH-----SCTTCEECCCCCCCGG--GCSEEEEEEEETTSCCEEECHHHHH--HHTS
T ss_pred             hhHHHHHHHhcCCCchHHHHHHHhhc-----CCCCeEEcCCcCCCch--hCCHHHHHHHHhhcccccccccchh--hhcC
Confidence            55557999999999999998876542     1368999999998731  11111100000         00000  1247


Q ss_pred             CCCCcCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCC
Q 020968           83 YSSTVGILPARRAIADYLNRDLPYKLS-------PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSH  155 (319)
Q Consensus        83 Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g  155 (319)
                      |++..|+++||+++++++.+.+|...+       +++|++|+|+++++.+++++++++||+|+++.|+|..+...++..|
T Consensus        74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g  153 (425)
T 2r2n_A           74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLG  153 (425)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGT
T ss_pred             CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcC
Confidence            999999999999999999887787664       3799999999999999999999999999999999999999999999


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhc------------cCceEEEE-cCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALAD------------ENTVALVI-INPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~------------~~~~~v~l-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      .+++.++.+..   ++|++.+++.++            +++++|++ ++|+||||.+++.+++++|+++|+++|++||+|
T Consensus       154 ~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~D  230 (425)
T 2r2n_A          154 CNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIED  230 (425)
T ss_dssp             CEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence            99999987542   589999999886            35677765 689999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHH
Q 020968          223 EVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQF  301 (319)
Q Consensus       223 ~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~  301 (319)
                      |+|+++.+++..+.++..++..+++++++|+||+|+ +|+|+||+++++        ++++++..... ...+++++.|.
T Consensus       231 e~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~  301 (425)
T 2r2n_A          231 DPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTLHPSTFNQL  301 (425)
T ss_dssp             CTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTCSSCHHHHH
T ss_pred             CCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcCCCCHHHHH
Confidence            999999988766667777766678999999999997 999999999864        57888877665 34577999999


Q ss_pred             HHHHHHh
Q 020968          302 LKSSRKL  308 (319)
Q Consensus       302 ~~~~~l~  308 (319)
                      ++..++.
T Consensus       302 a~~~~l~  308 (425)
T 2r2n_A          302 MISQLLH  308 (425)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9888553

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.9e-37  Score=289.04  Aligned_cols=278  Identities=18%  Similarity=0.208  Sum_probs=231.4

Q ss_pred             hcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHh
Q 020968           22 TASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLN  101 (319)
Q Consensus        22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~  101 (319)
                      ....+.+|.++..... +....++++|+|+.|+++    +++++.+.+++.+.+.......|++..|..++|+++++++.
T Consensus        22 ~~~~~~~~~~~~~~~~-~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~   96 (437)
T 3g0t_A           22 DLGMASIRDLVALVTN-LEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAK   96 (437)
T ss_dssp             CGGGCCHHHHHHHHHH-HHHHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHHHHHH-HHHhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHH
Confidence            4556788888765543 333447889999999976    67889999999998875443689988889999999999999


Q ss_pred             hhCCCCCCCCcEEEeCCHHHHHHHHHHHhc--CCCC--EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHH
Q 020968          102 RDLPYKLSPDDVYLTLGCTQAIEVILTVLA--RPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE  177 (319)
Q Consensus       102 ~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~--~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  177 (319)
                      +.+|..+++++|++|+|+++++.+++++++  ++||  +|+++.|+|..+...++..|.+++.++.+ .+++.+|++.++
T Consensus        97 ~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~  175 (437)
T 3g0t_A           97 LFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLE  175 (437)
T ss_dssp             HHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHH
T ss_pred             HhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHH
Confidence            888888899999999999999999999998  9999  99999999999999999999999999986 456788999999


Q ss_pred             hhh-ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC----CC-cccCC-CCCeEEE
Q 020968          178 ALA-DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV----PM-GVFGS-IVPVLTL  250 (319)
Q Consensus       178 ~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~----~~-~~~~~-~~~vi~~  250 (319)
                      +++ ++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++....    ++ ..+.. .++++++
T Consensus       176 ~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  255 (437)
T 3g0t_A          176 SYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILA  255 (437)
T ss_dssp             HHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEE
T ss_pred             HHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEE
Confidence            999 67889999999999999999999999999999999999999999999888643221    11 33332 5788999


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHH-H-----------------HHHhhh-hcCCcchHHHHHHHHHHhccc
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD-S-----------------IKSFLN-ISSDPATFIQFLKSSRKLKRN  311 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~-~-----------------~~~~~~-~~~~~~~~~q~~~~~~l~~~~  311 (319)
                      +|+||.++++|+|+||+++++        ++++ .                 +..... ...+++.+.|.++..++....
T Consensus       256 ~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  327 (437)
T 3g0t_A          256 LSSSKAFSYAGQRIGVLMISG--------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACN  327 (437)
T ss_dssp             EESTTTTSCGGGCCEEEEECH--------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHH
T ss_pred             EcCccCCCCccceeEEEEECH--------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcH
Confidence            999999999999999999853        4666 5                 554443 345778899999888664444


Q ss_pred             cc
Q 020968          312 SF  313 (319)
Q Consensus       312 ~~  313 (319)
                      .|
T Consensus       328 ~~  329 (437)
T 3g0t_A          328 DG  329 (437)
T ss_dssp             TT
T ss_pred             hH
Confidence            33

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=1.5e-36  Score=288.11  Aligned_cols=271  Identities=23%  Similarity=0.359  Sum_probs=222.7

Q ss_pred             HHHHHHHhhhcCCC----CeEeccCCCCCCCCCCC-------------------------CcHHHHHHHHHHhhcC---C
Q 020968           32 LNSLLENLNKNDTR----PLIPLGHGDPSAFPSFR-------------------------TASVAVDAIVHSVRSA---R   79 (319)
Q Consensus        32 ~~~~~~~~~~~~~~----~~i~l~~g~~~~~~~~~-------------------------~~~~~~~a~~~~~~~~---~   79 (319)
                      .+++.+.+++..+.    .+|+.++|+|......+                         .|+.+++++.+.+...   .
T Consensus        47 a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~  126 (500)
T 3tcm_A           47 AQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRA  126 (500)
T ss_dssp             HHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSC
T ss_pred             HHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCc
Confidence            34555555444444    89999999985332211                         4555666666666652   4


Q ss_pred             CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHhhCCCeE
Q 020968           80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPYYEARATHSHLEV  158 (319)
Q Consensus        80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~  158 (319)
                      ...|++..|..++|+++++++.+.+|..+++++|++|+|+++++..++.+++ ++||+|+++.|+|..+...++..|.++
T Consensus       127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~  206 (500)
T 3tcm_A          127 TGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGAL  206 (500)
T ss_dssp             SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEE
T ss_pred             CCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEE
Confidence            5689999999999999999999888888899999999999999999999998 799999999999999999999999999


Q ss_pred             EEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC
Q 020968          159 RHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN  232 (319)
Q Consensus       159 ~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~  232 (319)
                      +.++.+++++|.+|+++|++++++      ++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++
T Consensus       207 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~  286 (500)
T 3tcm_A          207 VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVD  286 (500)
T ss_dssp             EEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCT
T ss_pred             EEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCC
Confidence            999998877899999999999876      67899999999999999999999999999999999999999999999864


Q ss_pred             -CCCCCCcc----c---CCCCCeEEEecCcccc-CCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHH
Q 020968          233 -TPFVPMGV----F---GSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLK  303 (319)
Q Consensus       233 -~~~~~~~~----~---~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~  303 (319)
                       ....++..    +   ....++|+++|+||+| +++|+|+||+++.+..     +++++.+........+++.+.|.++
T Consensus       287 ~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~q~~~  361 (500)
T 3tcm_A          287 NKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITGQILA  361 (500)
T ss_dssp             TCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred             CCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHHHHHH
Confidence             34444332    2   2334689999999998 8999999999984211     2488888877766667889999988


Q ss_pred             HHHH
Q 020968          304 SSRK  307 (319)
Q Consensus       304 ~~~l  307 (319)
                      +.++
T Consensus       362 ~~~l  365 (500)
T 3tcm_A          362 SLVM  365 (500)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8744

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=2.2e-36  Score=283.18  Aligned_cols=282  Identities=17%  Similarity=0.210  Sum_probs=227.0

Q ss_pred             CchHHHHhcccccH-HHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc----CCCCCCCCCcCC
Q 020968           15 KANEELKTASGITV-RGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS----ARFNCYSSTVGI   89 (319)
Q Consensus        15 ~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~   89 (319)
                      +++.+++.+.++.. +.+.++........++.++|+|+.|+++    ++.++.+.+++.+.+..    .....|++..|.
T Consensus        38 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~  113 (449)
T 3qgu_A           38 QRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQ  113 (449)
T ss_dssp             CCCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCC
T ss_pred             hhhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCc
Confidence            45667777777644 5666666666655678899999999876    67899999999988874    234579888899


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCe----------EE
Q 020968           90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE----------VR  159 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~----------~~  159 (319)
                      ++||+++++++.  +|..+++++|++|+|+++++..+ .+++++||+|+++.|+|.++...++..|.+          ++
T Consensus       114 ~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~  190 (449)
T 3qgu_A          114 GALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIE  190 (449)
T ss_dssp             HHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEE
T ss_pred             HHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeE
Confidence            999999999997  77778899999999999999998 888899999999999999999999999998          99


Q ss_pred             EEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc
Q 020968          160 HFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       160 ~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                      .++.+..+++..+++++     +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++.
T Consensus       191 ~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~  265 (449)
T 3qgu_A          191 YMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIY  265 (449)
T ss_dssp             EEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGG
T ss_pred             EEecccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHh
Confidence            99987666666665432     4688999999999999999999999999999999999999999999998876666666


Q ss_pred             ccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          240 VFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       240 ~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      .+.. .+++++++|+||+|+++|+|+||++++++-.......+...+..... .+.+++++.|.++..++.
T Consensus       266 ~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  336 (449)
T 3qgu_A          266 EIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQ  336 (449)
T ss_dssp             GSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTS
T ss_pred             hccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHh
Confidence            6643 46789999999999999999999998764311000012223444433 345678999998887554

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=3.7e-36  Score=274.52  Aligned_cols=264  Identities=22%  Similarity=0.392  Sum_probs=224.0

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|++++.++++.++.+.+...+.-  ..++++|+|+.|+++    +++++.+.+++.+.+... ...|++..|..++|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~   74 (370)
T 2z61_A            2 LSKRLLNFESFEVMDILALAQKLE--SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREK   74 (370)
T ss_dssp             CCHHHHHCCCCTTHHHHHHHHHHH--HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred             hhhhhhhccccHHHHHHHHHHHHH--hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHH
Confidence            467889999999999887654332  236789999999976    456899999999888654 3479887899999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..++++++++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++        +|+++
T Consensus        75 la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~  146 (370)
T 2z61_A           75 ISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVES  146 (370)
T ss_dssp             HHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHH
T ss_pred             HHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHH
Confidence            9999998888888899999999999999999999999999999999999999999999999988877        58999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSIS  254 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~s  254 (319)
                      +++.+++++++|++++|+||||.+++.+    |.++|+++|+++|+||+|..+.+++. +.++..+. ..+++++++|+|
T Consensus       147 l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~s  221 (370)
T 2z61_A          147 LEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFS  221 (370)
T ss_dssp             HHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEEST
T ss_pred             HHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecCh
Confidence            9999988889999999999999999965    99999999999999999999888763 34444442 346789999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      |.++++|+|+||+++++        +++++++.... ...+++++.|.++..++
T Consensus       222 K~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  267 (370)
T 2z61_A          222 KLYAMTGWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAF  267 (370)
T ss_dssp             TTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGG
T ss_pred             hccCCccceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHH
Confidence            99989999999999864        57788777655 34567889998877744

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=2.7e-37  Score=284.52  Aligned_cols=278  Identities=17%  Similarity=0.157  Sum_probs=220.6

Q ss_pred             HHhcccccHHHHHHHHHHHhhhcCCCCeEeccCC---CCCCCCCCCCcHHHHHHHHH-HhhcCCCCCCCCCcCCHHHHHH
Q 020968           20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHG---DPSAFPSFRTASVAVDAIVH-SVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +...+++.++.+.+.+.+    ...+++|+|+.|   +++  ...+.++.+.+++.+ .+.......|++..|..++|++
T Consensus         5 ~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~   78 (397)
T 3fsl_A            5 VDAYAGDPILTLMERFKE----DPRSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHA   78 (397)
T ss_dssp             CCCCCCCHHHHHHHHHHT----CCCSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHH
T ss_pred             CCCCCCCchhhHHHHHhc----CCCCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHH
Confidence            456677888888776643    346789999999   554  224555999999999 8876555689988899999999


Q ss_pred             HHHHHhhhCCCCCCCC--cEEEeCCHHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           96 IADYLNRDLPYKLSPD--DVYLTLGCTQAIEVIL--TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~--~i~~~~G~t~ai~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      +++++....+..++++  +|++|+|++++++.++  .+++++||+|+++.|+|..+...++..|.+++.++..+++++.+
T Consensus        79 la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  158 (397)
T 3fsl_A           79 IAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGV  158 (397)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEE
T ss_pred             HHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcC
Confidence            9999976544344678  8999999999999995  45578999999999999999999999999999999855567889


Q ss_pred             CHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCCccc-CCCCC
Q 020968          172 DLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVF-GSIVP  246 (319)
Q Consensus       172 d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~-~~~~~  246 (319)
                      |++.+++.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ ...++
T Consensus       159 d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~  238 (397)
T 3fsl_A          159 RFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLP  238 (397)
T ss_dssp             CHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred             cHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCC
Confidence            9999999987   5678888999999999999999999999999999999999999999988632 22233333 34578


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH----Hhh-hhcCCcchHHHHHHHHHHh
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK----SFL-NISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~q~~~~~~l~  308 (319)
                      +++++|+||.|+++|+|+||++++...     ++.+.++.    ... ..+..++.+.|.+++.++.
T Consensus       239 ~i~~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  300 (397)
T 3fsl_A          239 ALVSNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN  300 (397)
T ss_dssp             EEEEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHT
T ss_pred             EEEEecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhc
Confidence            999999999999999999999864321     23444332    222 2345668899988887443

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=3.5e-37  Score=281.75  Aligned_cols=265  Identities=20%  Similarity=0.295  Sum_probs=217.8

Q ss_pred             ccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhh
Q 020968           24 SGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRD  103 (319)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~  103 (319)
                      +++.++.+...+ +.++. .+ ++|+|+.|+++    +++++.+.+++.+.+.  ....|++..|..++|+++++++.+.
T Consensus         5 ~~~~~~~~~~~~-~~~~~-~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~   75 (376)
T 3ezs_A            5 EPYPFERLRALL-KEITP-KK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRR   75 (376)
T ss_dssp             CCCHHHHHHHHH-TTCCC-SS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHH-Hhhhc-cC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHH
Confidence            445566666533 22222 23 99999999976    5778999999998773  3458998889999999999999888


Q ss_pred             CCCCCCCCcEEEeCCHHHHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc
Q 020968          104 LPYKLSPDDVYLTLGCTQAIEVILTVLARP--GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD  181 (319)
Q Consensus       104 ~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~  181 (319)
                      +|..+++++|++|+|+++++..++++++++  ||+|+++.|+|..+...++..|.+++.++.++.+++.+   ++++.+.
T Consensus        76 ~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~~~~~  152 (376)
T 3ezs_A           76 FKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLNEKEL  152 (376)
T ss_dssp             HSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCCHHHH
T ss_pred             hCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHHhhhc
Confidence            887778999999999999999999999999  99999999999999999999999999999876544433   5566666


Q ss_pred             cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-C-----CCCCeEEEecCcc
Q 020968          182 ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-G-----SIVPVLTLGSISK  255 (319)
Q Consensus       182 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~-----~~~~vi~~~s~sK  255 (319)
                      ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. .++... .     ..+++++++|+||
T Consensus       153 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK  231 (376)
T 3ezs_A          153 QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPP-PSLLEACMLAGNEAFKNVLVIHSLSK  231 (376)
T ss_dssp             HHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCC-CCHHHHHHHTTCTTCTTEEEEEESTT
T ss_pred             cCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCC-CCHHHccccccccccCcEEEEecchh
Confidence            67899999999999999999999999999999999999999999999887733 232221 1     4578999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~  309 (319)
                      .++++|+|+||++++        +++++.++..... ..+++++.|.++..++..
T Consensus       232 ~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  278 (376)
T 3ezs_A          232 RSSAPGLRSGFIAGD--------SRLLEKYKAFRAYLGYTSANAIQKASEAAWLD  278 (376)
T ss_dssp             TTTCGGGCCEEEEEC--------HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC
T ss_pred             ccCCccceeEEEeeC--------HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC
Confidence            999999999999974        3588888776653 456789999998885543

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=5e-36  Score=277.02  Aligned_cols=280  Identities=18%  Similarity=0.306  Sum_probs=230.9

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCC
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGI   89 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~   89 (319)
                      |..++|++++.+.++.++.+++...+.  +.++.++|+|+.|.|+.  ...+++.+.+++.+.+...  ... |++..|.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~   77 (407)
T 2zc0_A            3 YTKYLAGRANWIKGSALADVMKKASEL--QKKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGI   77 (407)
T ss_dssp             GGGGSCGGGGGCCCCHHHHHHHHHHHH--HHSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCC
T ss_pred             chhhhhhhhccCCchHHHHHHHhhhcc--cCCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCCCCC
Confidence            344467788888888898888755422  12345899999998763  2346788999998887653  234 8887899


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCC
Q 020968           90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW  169 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  169 (319)
                      .++|+++++++.+.+|..+++++|++|+|+++|+..++++++++||+|+++.|+|..+...++..|.+++.++.+++   
T Consensus        78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---  154 (407)
T 2zc0_A           78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---  154 (407)
T ss_dssp             HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---
Confidence            99999999999887787778899999999999999999999999999999999999999999999999999988542   


Q ss_pred             cCCHHHHHhhhc----c--CceEE-EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          170 EVDLDAVEALAD----E--NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       170 ~~d~~~l~~~l~----~--~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      ++|++.++++++    +  ++++| ++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++..+.++..+.
T Consensus       155 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  234 (407)
T 2zc0_A          155 GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD  234 (407)
T ss_dssp             EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC
T ss_pred             CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC
Confidence            389999999887    5  67776 4779999999999999999999999999999999999999988766555666665


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      ..+++++++|+||.++ +|+|+||++++.        +++++++..... ..+++++.|.++..++.
T Consensus       235 ~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  292 (407)
T 2zc0_A          235 NEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLK  292 (407)
T ss_dssp             SSCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHH
T ss_pred             CCCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence            5568999999999998 999999999852        577887766543 34568899988887543

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.5e-36  Score=279.51  Aligned_cols=273  Identities=24%  Similarity=0.385  Sum_probs=228.1

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++.++..++++.++.+.....+.- . .++++|+|+.|+++    ++.++.+.+++ +.+... ...|++..|..++|++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~   87 (409)
T 2gb3_A           16 FSDRVLLTEESPIRKLVPFAEMAK-K-RGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELREA   87 (409)
T ss_dssp             CCHHHHSCCCCTTGGGHHHHHHHH-H-TTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHH
T ss_pred             HHHHhhcCCccHHHHHHHHHHHHH-h-cCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHH
Confidence            577889999999988876554332 2 36789999999975    56678899999 877653 3478887889999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..++++++++|+|+++|+..++++++++||+|+++.|+|..+...++..|.+++.++.++.+++.+ +++
T Consensus        88 la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~  166 (409)
T 2gb3_A           88 FASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQN  166 (409)
T ss_dssp             HHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTT
T ss_pred             HHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHH
Confidence            9999998888888889999999999999999999999999999999999999999999999999999865445555 889


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSIS  254 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~s  254 (319)
                      +++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++. +.++  +. ..+++++++|+|
T Consensus       167 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~~~~~~~~i~~~s~s  243 (409)
T 2gb3_A          167 LESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--LSIESDKVVVIDSVS  243 (409)
T ss_dssp             GGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--GGSCCTTEEEEEEST
T ss_pred             HHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--cccCCCCEEEEecch
Confidence            9998888889999999999999999999999999999999999999999999887663 2232  21 135689999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      |.++++|+|+||+++++       ++++++++.....+.+++++.|.++..++
T Consensus       244 K~~g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~a~~~~l  289 (409)
T 2gb3_A          244 KKFSACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGSVGLL  289 (409)
T ss_dssp             TTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred             hccCCccceEEEEEECc-------HHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence            99999999999999864       14777777665432167889998887755

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=4.1e-37  Score=281.24  Aligned_cols=249  Identities=17%  Similarity=0.278  Sum_probs=217.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+.++|+|+.|++.    +++++.+.+++.+.+.... ..|++ .+ .++|+++++++.+.+|..+++++|++|+|++++
T Consensus        21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a   93 (377)
T 3fdb_A           21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQREA-FGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG   93 (377)
T ss_dssp             SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTTC-CSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcCC-CCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence            47889999999865    6789999999999887643 47888 67 899999999999888888889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ++.++++++++||+|+++.|+|..+...++..|.+++.++.+..    +|+++++++++++++++++++|+||||.+++.
T Consensus        94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~  169 (377)
T 3fdb_A           94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP  169 (377)
T ss_dssp             HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred             HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999998643    89999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCC-CCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGN-TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      +++++|+++|+++|+++|+|++|..+.+++ ..+.++..+...+++++++|+||.++++|+|+||+++++       +++
T Consensus       170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~  242 (377)
T 3fdb_A          170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD  242 (377)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence            999999999999999999999999999877 555555554445678999999999999999999998754       357


Q ss_pred             HHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          282 VDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       282 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      ++.++.... ...+++++.|.++..++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  271 (377)
T 3fdb_A          243 AEHWQQLSPVIKDGASTLGLIAAEAAYRY  271 (377)
T ss_dssp             HHHHHHSCHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCHHHHHHHHHHHhc
Confidence            787776654 3457788999887775554

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=4.8e-37  Score=285.00  Aligned_cols=289  Identities=13%  Similarity=0.079  Sum_probs=226.8

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCC-CCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCH
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPS-AFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL   90 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~   90 (319)
                      |.+.++.+.....++.+..+.+...+..++.++.++|+|+.|+|. ..+.+++++.+.+++.+..... ...|++..|.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   83 (418)
T 3rq1_A            5 TSVAAKHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIAGIP   83 (418)
T ss_dssp             CCCSCTTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTTCCH
T ss_pred             hhhhHhhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCCChH
Confidence            444445556667778888888877776666667799999999871 1234788999999887654322 34799888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968           91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE  170 (319)
Q Consensus        91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  170 (319)
                      ++|+++++++....+.. .+++|++|+|+++|+..++++++++||+|+++.|+|..|...++..|.+++.++.++++ +.
T Consensus        84 ~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~  161 (418)
T 3rq1_A           84 DFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NN  161 (418)
T ss_dssp             HHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SS
T ss_pred             HHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CC
Confidence            99999999997654422 13399999999999999999999999999999999999999999999999999986543 78


Q ss_pred             CCHHHHHhhhcc----Cce-EEEEcCC-CCccccccCHHHHHHHHHHHH------HcCCEEEEeCCCCCccCCCCCCCCC
Q 020968          171 VDLDAVEALADE----NTV-ALVIINP-GNPCGNVYTYQHLQKIAETAK------KLGIMVIADEVYDHLAFGNTPFVPM  238 (319)
Q Consensus       171 ~d~~~l~~~l~~----~~~-~v~l~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~D~a~~~~~~~~~~~~~~  238 (319)
                      +|++.+++.+++    +++ ++++++| +||||.+++.+++++|+++|+      ++|+++|+||+|.++.+++....++
T Consensus       162 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~  241 (418)
T 3rq1_A          162 FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF  241 (418)
T ss_dssp             BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred             cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence            999999998874    555 7888999 999999999999999999999      8999999999999988765432222


Q ss_pred             cc-cC-CCCC--eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-----cCCcchHHHHHHHHHHh
Q 020968          239 GV-FG-SIVP--VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-----SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       239 ~~-~~-~~~~--vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~q~~~~~~l~  308 (319)
                      .. .. ..++  +|+++|+||.|+++|+|+||++++.+     +++++++++.....     +..++.++|.++..++.
T Consensus       242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  315 (418)
T 3rq1_A          242 FNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVA  315 (418)
T ss_dssp             GGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHT
T ss_pred             HHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhC
Confidence            22 21 1234  58999999999999999999998311     13577777765432     34578899998887443

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=2.6e-36  Score=277.10  Aligned_cols=252  Identities=17%  Similarity=0.230  Sum_probs=218.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|+++    +++++.+.+++.+.+.... ..|++.  ..++++++++++.+.+|..+++++|++|+|+++++
T Consensus        26 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~   98 (391)
T 3dzz_A           26 KEKELPMWIAEMD----FKIAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI   98 (391)
T ss_dssp             CTTCEECCSSCCS----SCCCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCCC----CCCCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence            5689999999866    7889999999999887643 467664  68999999999999888888899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc-CCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccC
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~  201 (319)
                      .+++++++++||+|+++.|+|..+...++..|.+++.++.+ ..++|.+|++.++++++ +++++|++++|+||||.+++
T Consensus        99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~  178 (391)
T 3dzz_A           99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS  178 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence            99999999999999999999999999999999999999886 34557799999999997 68899999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                      .+++++|+++|+++|+++|+|++|.++.+++..+.++..+..  .++++++.|+||.++++|+|+||+++++       +
T Consensus       179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~  251 (391)
T 3dzz_A          179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P  251 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence            999999999999999999999999999988766666666653  4679999999999999999999999864       3


Q ss_pred             HHHHHHHHhhh--hcCCcchHHHHHHHHHHhc
Q 020968          280 GIVDSIKSFLN--ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       280 ~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~  309 (319)
                      +++++++....  ...+++++.|.++..++..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  283 (391)
T 3dzz_A          252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE  283 (391)
T ss_dssp             HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence            57788776643  2346788888887775544

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.1e-36  Score=281.15  Aligned_cols=251  Identities=22%  Similarity=0.289  Sum_probs=217.3

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIE  124 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~  124 (319)
                      .+|+|+.|++..   +++++.+.+++.+.+.......|++..|..++++++++++.+.+|..+++ +++++|+|+++++.
T Consensus        40 ~~id~~~g~~~~---~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~  116 (407)
T 3nra_A           40 RPVDFSHGDVDA---HEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF  116 (407)
T ss_dssp             CCEETTSCCTTT---SCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             ceeeecCcCCCC---CCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence            489999998762   57889999999998875444468888899999999999999888877766 79999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC----CCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP----AKGWEVDLDAVEALADENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  200 (319)
                      .++.+++++||+|+++.|+|..+...++..|.+++.++.+.    ++++.+|++.+++++++++++|++++|+||||.++
T Consensus       117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~  196 (407)
T 3nra_A          117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY  196 (407)
T ss_dssp             HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence            99999999999999999999999999999999999999842    35678999999999988889999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC--CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                      +.+++++|+++|+++|+++|+|++|..+.+++..+.++..+.  ..+++++++|+||.|+++|+|+||++++.       
T Consensus       197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------  269 (407)
T 3nra_A          197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR-------  269 (407)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH-------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH-------
Confidence            999999999999999999999999999999877666666653  45689999999999999999999999843       


Q ss_pred             hHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          279 SGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       279 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                       ++++.++.... ...+++++.|.++..++
T Consensus       270 -~~~~~l~~~~~~~~~~~~~~~~~a~~~~l  298 (407)
T 3nra_A          270 -AIIARMEKLQAIVSLRAAGYSQAVLRGWF  298 (407)
T ss_dssp             -HHHHHHHHHHHHHTSSSCHHHHGGGGGTT
T ss_pred             -HHHHHHHHHHhhhccCCChHHHHHHHHHH
Confidence             57888777655 34556778888776644

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.2e-36  Score=285.62  Aligned_cols=257  Identities=23%  Similarity=0.370  Sum_probs=203.6

Q ss_pred             CeEeccCCCCCCCCCCC---------------------CcHHHHHHHHHHhhcC---CCCCCCCCcCCHHHHHHHHHHHh
Q 020968           46 PLIPLGHGDPSAFPSFR---------------------TASVAVDAIVHSVRSA---RFNCYSSTVGILPARRAIADYLN  101 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~---------------------~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~  101 (319)
                      .+|++++|+|......+                     .|..+.+++.+.+...   ....|++..|..++|+++++++.
T Consensus        64 ~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~  143 (498)
T 3ihj_A           64 EVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYIT  143 (498)
T ss_dssp             SCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHH
T ss_pred             hhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            89999999985422111                     2455556666666542   34589999999999999999999


Q ss_pred             hhC-CCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968          102 RDL-PYKLSPDDVYLTLGCTQAIEVILTVLARPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV  176 (319)
Q Consensus       102 ~~~-g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  176 (319)
                      +.+ |+.+++++|++|+|+++++..++++++++||    +|+++.|+|+.|...++..|.+++.++.+++++|.+|+++|
T Consensus       144 ~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l  223 (498)
T 3ihj_A          144 RRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNEL  223 (498)
T ss_dssp             HHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHH
T ss_pred             HhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHH
Confidence            887 4888999999999999999999999998875    99999999999999999999999999998888899999999


Q ss_pred             Hhhhcc-----CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCCcccC--------
Q 020968          177 EALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFG--------  242 (319)
Q Consensus       177 ~~~l~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~--------  242 (319)
                      ++++++     ++++|++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.+++. .+.++..+.        
T Consensus       224 e~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~  303 (498)
T 3ihj_A          224 RRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS  303 (498)
T ss_dssp             HHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHH
T ss_pred             HHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhccccc
Confidence            999876     588999999999999999999999999999999999999999999999764 455554431        


Q ss_pred             CCCCeEEEecCcccc-CCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          243 SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ...++|+++|+||.| |++|+|+||+++.+.     ++++++.+........+++.+.|.+++.++
T Consensus       304 ~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~-----~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l  364 (498)
T 3ihj_A          304 SNVELASFHSTSKGYMGECGYRGGYMEVINL-----HPEIKGQLVKLLSVRLCPPVSGQAAMDIVV  364 (498)
T ss_dssp             TTCCEEEEEESSSSTTCCSSSCCEEEEEESC-----CHHHHHHHHHHHHHSCCCCHHHHHHHHHHT
T ss_pred             CceeEEEEeccccccccCcccceEEEEEecC-----CHHHHHHHHHHHhccCCCCHHHHHHHHHHh
Confidence            234589999999999 789999999985221     146888888777766678899999888733

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=9.2e-37  Score=283.90  Aligned_cols=272  Identities=19%  Similarity=0.231  Sum_probs=224.7

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPAR   93 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr   93 (319)
                      +|.+++.++++.++.+.+..       .++++|+|+.|.|+.  ...+++.+.+++.+.+....  ...|++..|..++|
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~-------~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr   91 (425)
T 1vp4_A           21 ISKIGQNMKSSIIREILKFA-------ADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLK   91 (425)
T ss_dssp             CCHHHHTCCCCCHHHHTTTT-------TSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHH
T ss_pred             hhhhhhcCCCcHHHHHHHhc-------cCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHH
Confidence            45677777777777765422       357899999998762  13467889999988876531  35788888999999


Q ss_pred             HHHHHHHhhhCCCC-CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968           94 RAIADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD  172 (319)
Q Consensus        94 ~~ia~~~~~~~g~~-~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  172 (319)
                      +++++++.+.+|.. +++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++   ++|
T Consensus        92 ~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d  168 (425)
T 1vp4_A           92 QQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMD  168 (425)
T ss_dssp             HHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EEC
T ss_pred             HHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCC
Confidence            99999997765766 77899999999999999999999999999999999999999999999999999988642   389


Q ss_pred             HHHHHhhhcc--------CceEE-EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          173 LDAVEALADE--------NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       173 ~~~l~~~l~~--------~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      ++.+++.+++        ++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..+..
T Consensus       169 ~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~  248 (425)
T 1vp4_A          169 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG  248 (425)
T ss_dssp             HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC
T ss_pred             HHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCC
Confidence            9999998865        67787 47899999999999999999999999999999999999999887765556655555


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      .+++++++|+||.|+ +|+|+||+++++        +++++++.... ...+++++.|.++..++.
T Consensus       249 ~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~  305 (425)
T 1vp4_A          249 PERVVLLNTFSKVLA-PGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRLAARYLE  305 (425)
T ss_dssp             TTTEEEEEESTTTTC-GGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeccccccc-cccceEEEeeCH--------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHh
Confidence            567899999999998 999999999853        57777776554 334568899998888553

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=3.5e-36  Score=276.22  Aligned_cols=256  Identities=17%  Similarity=0.312  Sum_probs=220.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+.++|+|+.|+++    +++++.+.+++.+.+.... ..|++  +..++++++++++.+.+|..+++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a  102 (391)
T 4dq6_A           30 GTNDLLPMWVADMD----FKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPA  102 (391)
T ss_dssp             SCSCSEECCSSSCS----SCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             CCCCceeccccCCC----CCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHH
Confidence            36899999999866    6889999999999887543 35665  56999999999999988877889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc--CCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL--PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  200 (319)
                      +..++++++++||+|+++.|+|..+...++..|.+++.++.+  .+++|.+|++++++++++ ++++++++|+||||.++
T Consensus       103 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~  181 (391)
T 4dq6_A          103 ISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVW  181 (391)
T ss_dssp             HHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCC
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCc
Confidence            999999999999999999999999999999999999999987  455678999999999987 89999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                      +.+++++|+++|+++|+++|+|++|.++.+++..+.++..+..  .+++++++|+||.++++|+|+||+++++       
T Consensus       182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------  254 (391)
T 4dq6_A          182 TKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD-------  254 (391)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------
T ss_pred             CHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------
Confidence            9999999999999999999999999999988776666666654  3688999999999999999999999865       


Q ss_pred             hHHHHHHHHhhhh--cCCcchHHHHHHHHHHhccccc
Q 020968          279 SGIVDSIKSFLNI--SSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       279 ~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      ++++++++.....  ..+++++.|.++..++...++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  291 (391)
T 4dq6_A          255 EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESW  291 (391)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHH
Confidence            2477777766542  3467888888877766543333

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=4.7e-36  Score=274.91  Aligned_cols=264  Identities=25%  Similarity=0.373  Sum_probs=217.4

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      ++++++.+.++.++.+.+...       .+++|+|+.|.++    +++++.+.+++.+.+..  ...|++..+..++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~   69 (381)
T 1v2d_A            3 LHPRTEAAKESIFPRMSGLAQ-------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREA   69 (381)
T ss_dssp             CCGGGGGC---CHHHHHHHHH-------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHH
T ss_pred             hhhhhhhcCccHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHH
Confidence            466777777777777665332       2568999999976    56889999999998865  4579887789999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLD  174 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~  174 (319)
                      +++++      +++++++++|+|+++++..+++++.++||+|+++.|+|..+...++..|.+++.++.+. ..++.+|++
T Consensus        70 la~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~  143 (381)
T 1v2d_A           70 LAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLS  143 (381)
T ss_dssp             HHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHH
T ss_pred             HHHhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHH
Confidence            99997      45678999999999999999999999999999999999999999999999999998751 124679999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                      ++++.+++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+ +....++..+ ..++++++.|+|
T Consensus       144 ~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~s  221 (381)
T 1v2d_A          144 ALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAG  221 (381)
T ss_dssp             HHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHH
T ss_pred             HHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeech
Confidence            99999988889999999999999999999999999999999999999999999887 4443444444 446789999999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      |.|+++|+|+||++++.        ++++.++.... ...+++++.|.++..++.
T Consensus       222 K~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  268 (381)
T 1v2d_A          222 KRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALK  268 (381)
T ss_dssp             HHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             hhcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHh
Confidence            99999999999999854        36666665544 345678888988777553

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=2.6e-36  Score=278.16  Aligned_cols=251  Identities=16%  Similarity=0.261  Sum_probs=213.9

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      +++++|+.|+++    +++++.+.+++.+.+... ...|++.  ..++|+++++++.+.+|..+++++|++|+|+++|+.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~  103 (399)
T 1c7n_A           31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (399)
T ss_dssp             TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence            589999999865    578899999999887643 3478764  899999999999887777778899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +++++++++||+|+++.|+|.++...++..|.+++.++.++. ++|.+|++.++++++ +++++|++++|+||||.+++.
T Consensus       104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  183 (399)
T 1c7n_A          104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK  183 (399)
T ss_dssp             HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred             HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence            999999999999999999999999999999999999887533 346799999999987 678899999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                      +++++|+++|+++|+++|+||+|..+.+++..+.++..+..  .+++++++|+||.++++|+|+||+++++       ++
T Consensus       184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~  256 (399)
T 1c7n_A          184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD  256 (399)
T ss_dssp             HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence            99999999999999999999999999887765556665543  4678999999999999999999999864       24


Q ss_pred             HHHHHHHhhhhc--CCcchHHHHHHHHHHhc
Q 020968          281 IVDSIKSFLNIS--SDPATFIQFLKSSRKLK  309 (319)
Q Consensus       281 ~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~  309 (319)
                      ++++++.....+  .+++++.|.++..++..
T Consensus       257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~  287 (399)
T 1c7n_A          257 IRERFTKSRDATSGMPFTTLGYKACEICYKE  287 (399)
T ss_dssp             HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence            777777665532  35788999888775543

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=1.6e-35  Score=275.94  Aligned_cols=280  Identities=20%  Similarity=0.258  Sum_probs=219.7

Q ss_pred             chHHHHhcccc-cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc----CCCCCCCCCcCCH
Q 020968           16 ANEELKTASGI-TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS----ARFNCYSSTVGIL   90 (319)
Q Consensus        16 ~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~g~~   90 (319)
                      ++.+++.++++ .+..+.++.........+.++|+|+.|+++    ++.++.+.+++.+.+..    .....|++..|..
T Consensus        26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~  101 (432)
T 3ei9_A           26 RNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAK  101 (432)
T ss_dssp             CCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCH
T ss_pred             cChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCH
Confidence            45577778775 566676766666666677899999999976    68899999999988763    2234788888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCC------------eE
Q 020968           91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHL------------EV  158 (319)
Q Consensus        91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~------------~~  158 (319)
                      +||+++++++.+  +..+++++|++|+|+++++.. +..++++||+|+++.|+|.++...++..|.            ++
T Consensus       102 ~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  178 (432)
T 3ei9_A          102 PLRAAIAKTFYG--GLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNI  178 (432)
T ss_dssp             HHHHHHHHHHHT--TTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTC
T ss_pred             HHHHHHHHHHHc--cCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCce
Confidence            999999999974  556788999999999999997 477788999999999999999888887774            67


Q ss_pred             EEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCC
Q 020968          159 RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM  238 (319)
Q Consensus       159 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~  238 (319)
                      +.++.+..+++..|++.     .++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. .++
T Consensus       179 ~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~  252 (432)
T 3ei9_A          179 EYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSI  252 (432)
T ss_dssp             EEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSG
T ss_pred             EEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CCh
Confidence            77887655555566443     246789999999999999999999999999999999999999999999877543 344


Q ss_pred             cccC-CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          239 GVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       239 ~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      ..+. ..+++|+++|+||+|+++|+|+||++++++........+++.+..... ...+++++.|.++..++.
T Consensus       253 ~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  324 (432)
T 3ei9_A          253 FEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLT  324 (432)
T ss_dssp             GGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSS
T ss_pred             hhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence            4443 246789999999999999999999998764200000112566665554 345678899988777553

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=5.6e-36  Score=277.22  Aligned_cols=281  Identities=16%  Similarity=0.147  Sum_probs=221.6

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhc-CCCCCCCCCcCCHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRS-ARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~i   96 (319)
                      ++..++++.++.+.+...+    .+++++|+|+.|.+ +......+++.+.+++.+.+.. .....|++..|..++|+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l   83 (412)
T 1ajs_A            8 EVPQAQPVLVFKLIADFRE----DPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA   83 (412)
T ss_dssp             TCCCCCCCHHHHHHHHHHT----CCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred             hCcccCCchHHHHHHHHhh----cCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence            5667888899998876653    24678999999986 3222245779999999988732 2345798888999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEE--eCCHHHHHHHHHH--HhcCCC-----CEEEEcCCCCcchHHHHhhCCCe-EEEEeccCC
Q 020968           97 ADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILT--VLARPG-----ANILLPRPGFPYYEARATHSHLE-VRHFDLLPA  166 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~--~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~  166 (319)
                      ++++...+|..+++++|++  |+|+++|+.++++  .++++|     |+|+++.|+|..+...++..|.+ ++.++..++
T Consensus        84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  163 (412)
T 1ajs_A           84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT  163 (412)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred             HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence            9999665555557889999  9999999999964  445789     99999999999999999999999 999988655


Q ss_pred             CCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC--CCCCCCccc
Q 020968          167 KGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN--TPFVPMGVF  241 (319)
Q Consensus       167 ~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~  241 (319)
                      +++.+|++++++.+.+   +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++  ....++..+
T Consensus       164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~  243 (412)
T 1ajs_A          164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF  243 (412)
T ss_dssp             TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred             CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence            6788999999998864   56777789999999999999999999999999999999999999988764  122233323


Q ss_pred             C-CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH----HHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          242 G-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG----IVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       242 ~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      . ..+++|+++|+||.|+++|+|+||++++..+     ++    +++.++.... .+..++++.|.++..++.
T Consensus       244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  311 (412)
T 1ajs_A          244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKE-----PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLS  311 (412)
T ss_dssp             HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHH
T ss_pred             hccCCcEEEEEecccccCCCCcceEEEEEecCC-----HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHc
Confidence            2 3467899999999999999999999983111     23    4444555333 344568899998887553

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=2.6e-36  Score=279.34  Aligned_cols=275  Identities=16%  Similarity=0.170  Sum_probs=205.9

Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      ++++..+++.|+.+.+.+.+    ...+++|+|+.|+| +    ++.++.+.+++.++.. .....|.+..|.++||+++
T Consensus        18 ~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d----~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr~~i   88 (409)
T 4eu1_A           18 GPGSMGKPDPILGLGQDFRM----DPAKRKVNLSIGVYRD----DADQPFVLECVKQATL-GTNMDYAPVTGIASFVEEA   88 (409)
T ss_dssp             ---------CHHHHHHHHHH----CCCSSCEECCCSSCCC----TTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHHHHH
T ss_pred             hcCCCCCCChHHHHHHHHhh----CCCcCceeeeeeEEEC----CCCCEeecHHHHhcCc-cccccCCCCCCcHHHHHHH
Confidence            36788888888887776643    34678999999997 5    3445556666666532 3345898888999999999


Q ss_pred             HHHHhhhCCCCCCCCcEE--EeCCHHHHHHHHH---HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           97 ADYLNRDLPYKLSPDDVY--LTLGCTQAIEVIL---TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i~--~~~G~t~ai~~~~---~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      ++++....+..+++++|.  .+.|+++++..+.   ++++++||+|+++.|+|..+...++..|.+++.++...++++.+
T Consensus        89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  168 (409)
T 4eu1_A           89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL  168 (409)
T ss_dssp             HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred             HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence            999843222112267884  5999999988754   45568999999999999999999999999999999866667899


Q ss_pred             CHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCCCccc-CCCC
Q 020968          172 DLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVF-GSIV  245 (319)
Q Consensus       172 d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~-~~~~  245 (319)
                      |++++++.++   +.++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++.  ...++..+ ...+
T Consensus       169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~  248 (409)
T 4eu1_A          169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP  248 (409)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred             cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence            9999999885   2456667799999999999999999999999999999999999999988652  11222222 3456


Q ss_pred             CeEEEecCccccCCCcceeeEE--EeeCCCCCccchH----HHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          246 PVLTLGSISKRWIVPGWRLGWL--VTSDPNGILQDSG----IVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i--~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      ++++++|+||+|+++|+|+||+  ++++       ++    ++++++.... .+..++.+.|.+++.++.
T Consensus       249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  311 (409)
T 4eu1_A          249 NLIVAQSFSKNFGLYGHRCGALHISTAS-------AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILK  311 (409)
T ss_dssp             CCEEEEECTTTSSCGGGCCEEEEEECSS-------HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             cEEEEecCcccccCccCCceEEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhC
Confidence            7899999999999999999998  6554       24    5566665543 355678899988887554

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=4.5e-36  Score=281.19  Aligned_cols=281  Identities=15%  Similarity=0.137  Sum_probs=217.8

Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHh--hcCCCCCCCCCcCCHHHHH
Q 020968           18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSV--RSARFNCYSSTVGILPARR   94 (319)
Q Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~--~~~~~~~Y~~~~g~~~lr~   94 (319)
                      ++++..+++.|+.+.+.+.+    ...+.+|+|+.|.+ +.....+..+.+.+++.+..  .......|.+..|.+++|+
T Consensus        26 ~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~  101 (448)
T 3meb_A           26 SGFPASPPDAILNLTVLYNA----DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLE  101 (448)
T ss_dssp             TTCCCCCCCTTHHHHHHHHH----CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHH
T ss_pred             hcCCCCCCChHHHHHHHHHh----CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHH
Confidence            36677788888888876643    34667899999998 53333456788888876654  2233458998889999999


Q ss_pred             HHHHHHhhhCCCC---CCCCcEEE--eCCHHHHHHH--HHHHhcCCCCEEEEcCCCCcchHHHHh----hCCCeEEEEec
Q 020968           95 AIADYLNRDLPYK---LSPDDVYL--TLGCTQAIEV--ILTVLARPGANILLPRPGFPYYEARAT----HSHLEVRHFDL  163 (319)
Q Consensus        95 ~ia~~~~~~~g~~---~~~~~i~~--~~G~t~ai~~--~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~  163 (319)
                      ++++++.   |..   +++++|++  |+|+++|+++  .+.+++.+||+|++++|+|..+...++    ..|.+++.++.
T Consensus       102 ~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~  178 (448)
T 3meb_A          102 AAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTY  178 (448)
T ss_dssp             HHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECC
T ss_pred             HHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEec
Confidence            9999983   322   22689999  9999999988  455667899999999999999999999    99999999998


Q ss_pred             cCCC-CCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCC
Q 020968          164 LPAK-GWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVP  237 (319)
Q Consensus       164 ~~~~-~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~  237 (319)
                      .+.+ ++.+|++++++.+++   +++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++.  ...+
T Consensus       179 ~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~  258 (448)
T 3meb_A          179 LRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFA  258 (448)
T ss_dssp             BCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHH
T ss_pred             cccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchh
Confidence            5444 689999999998873   567788899999999999999999999999999999999999999887651  1122


Q ss_pred             Cccc-CCCCCeEEEecCccccCCCcceeeEE--Ee--------eCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          238 MGVF-GSIVPVLTLGSISKRWIVPGWRLGWL--VT--------SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       238 ~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i--~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                      +..+ ...+++++++|+||.|+++|+|+||+  ++        +++.   ...+++..++.... .+..++.+.|.+++.
T Consensus       259 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~---~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~  335 (448)
T 3meb_A          259 VRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA---LSAAMVSGMTLQIRKTWSMSAIHGAYIVQV  335 (448)
T ss_dssp             HHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH---HHHHHHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred             HHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH---HHHHHHHHHHHHHhcccCCccHHHHHHHHH
Confidence            2222 23467899999999999999999998  65        3310   00135666665443 455778899999888


Q ss_pred             HHh
Q 020968          306 RKL  308 (319)
Q Consensus       306 ~l~  308 (319)
                      ++.
T Consensus       336 ~l~  338 (448)
T 3meb_A          336 IVH  338 (448)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            543

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=1.7e-35  Score=272.06  Aligned_cols=251  Identities=20%  Similarity=0.295  Sum_probs=208.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH-HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP-ARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+++|+|+.|+++    +++++.+.+++.+.+... ...|++.  ..+ +|+++++++.+.+|..+++++|++|+|++++
T Consensus        27 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~a   99 (390)
T 1d2f_A           27 TADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM   99 (390)
T ss_dssp             ---CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHH
T ss_pred             CCCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHH
Confidence            3579999999865    578899999999988653 3478764  678 9999999999888877889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC-CCcCCHHHHHhhhcc-CceEEEEcCCCCcccccc
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALADE-NTVALVIINPGNPCGNVY  200 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~  200 (319)
                      +.+++++++++||+|+++.|+|..+...++..|.+++.++.+.++ +|.+|++.+++++++ ++++|++++|+||||.++
T Consensus       100 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~  179 (390)
T 1d2f_A          100 VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVW  179 (390)
T ss_dssp             HHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCC
T ss_pred             HHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCc
Confidence            999999999999999999999999999999999999999986543 567999999999875 788999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                      +.+++++|+++|+++|+++|+||+|..+.+++..+.++..+...-.-+ +.|+||.++++|+|+||++++++       +
T Consensus       180 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~-------~  251 (390)
T 1d2f_A          180 TCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS-------S  251 (390)
T ss_dssp             CTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH-------H
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCH-------H
Confidence            999999999999999999999999999988776655665554321013 99999999999999999998642       4


Q ss_pred             HHHHHHHhhh--h-cCCcchHHHHHHHHHHhc
Q 020968          281 IVDSIKSFLN--I-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       281 ~~~~~~~~~~--~-~~~~~~~~q~~~~~~l~~  309 (319)
                      ++++++....  . +.+++++.|.++..++..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  283 (390)
T 1d2f_A          252 SRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ  283 (390)
T ss_dssp             HHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc
Confidence            7777776554  2 336788888877765543

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=2.6e-36  Score=278.17  Aligned_cols=271  Identities=21%  Similarity=0.292  Sum_probs=222.3

Q ss_pred             CCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCc
Q 020968           10 NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTV   87 (319)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~   87 (319)
                      +.|..++|++.+.+.++.++.++...       .++++|+|+.|.++.  ...+++.+.+++.+.+...  ....|++..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~   74 (397)
T 2zyj_A            4 LSWSEAFGKGAGRIQASTIRELLKLT-------QRPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTE   74 (397)
T ss_dssp             CCHHHHSCGGGGGCCCCHHHHHHHHH-------TSTTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTT
T ss_pred             ccHHHHhhhhhcccCchHHHHHHhhc-------cCCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCC
Confidence            34554467788888878788776543       256899999998762  1346788999998877642  134788878


Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK  167 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  167 (319)
                      |..++|+++++++      ++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++ 
T Consensus        75 ~~~~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-  147 (397)
T 2zyj_A           75 GYAPLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-  147 (397)
T ss_dssp             CCHHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-
T ss_pred             CCHHHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-
Confidence            9999999999999      356789999999999999999999999999999999999999999999999999987542 


Q ss_pred             CCcCCHHHHHhhhcc-CceEE-EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC-
Q 020968          168 GWEVDLDAVEALADE-NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-  244 (319)
Q Consensus       168 ~~~~d~~~l~~~l~~-~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~-  244 (319)
                        ++|++++++.+++ ++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..+..+ 
T Consensus       148 --~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~  225 (397)
T 2zyj_A          148 --GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREA  225 (397)
T ss_dssp             --EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHH
T ss_pred             --CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCccc
Confidence              3899999999875 67877 478999999999999999999999999999999999999998877655555555444 


Q ss_pred             --CCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          245 --VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       245 --~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                        +++++++|+||+++ +|+|+||++++.        +++++++.... ...+.+++.|.++..++
T Consensus       226 ~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l  282 (397)
T 2zyj_A          226 GYPGVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELL  282 (397)
T ss_dssp             TCCCEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             CCCeEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence              67899999999998 999999999853        57777776554 33456889998887744

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=1.6e-35  Score=275.26  Aligned_cols=257  Identities=18%  Similarity=0.250  Sum_probs=221.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|+++    ++.++.+.+++.+.+.... ..|++.  ..++++++++++.+.+|..+++++|++|+|+++|+
T Consensus        60 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~  132 (421)
T 3l8a_A           60 NPELLQMWVADMD----FLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI  132 (421)
T ss_dssp             CTTCEECCSSCCC----SCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCeeecccCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence            5789999999865    7889999999999887543 367653  38999999999999888888899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc-CCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccC
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~  201 (319)
                      +.+++++.++||+|+++.|+|.++...++..|.+++.++.+ ...+|.+|+++++++++ +++++|++++|+||||.+++
T Consensus       133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~  212 (421)
T 3l8a_A          133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD  212 (421)
T ss_dssp             HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999986 45667899999999997 68999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                      .+++++|+++|+++|+++|+||+|.++.+++..+.++..+..  .++++++.|+||+++++|+|+||+++++       +
T Consensus       213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~  285 (421)
T 3l8a_A          213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E  285 (421)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence            999999999999999999999999999998877667766654  4678999999999999999999999874       2


Q ss_pred             HHHHHHHHhhh--hcCCcchHHHHHHHHHHhcccccc
Q 020968          280 GIVDSIKSFLN--ISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       280 ~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      ++++.++....  ...++++++|.++..++...++|.
T Consensus       286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~  322 (421)
T 3l8a_A          286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWL  322 (421)
T ss_dssp             HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHH
Confidence            57777776653  234678899988887665444443

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=6.7e-36  Score=276.79  Aligned_cols=280  Identities=14%  Similarity=0.130  Sum_probs=218.8

Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHH-HhhcCCCCCCCCCcCCHHHHHH
Q 020968           18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVH-SVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +++....++.++.+.+.+.+.    .++++|+|+.|++ +.....++++.+.+++.+ .+.......|++..|.+++|++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~   81 (412)
T 1yaa_A            6 NNIELLPPDALFGIKQRYGQD----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN   81 (412)
T ss_dssp             TTCCCCCCCTTHHHHHHHHTC----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred             ccCcccCCCcHHHHHHHHhcC----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence            456677778888888766432    4678999999986 322334678999999998 8764445579888899999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEE--eCCHHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           96 IADYLNRDLPYKLSPDDVYL--TLGCTQAIEVIL--TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      +++++...+|..+++++|++  |+|+++|+.+++  ..+.++||+|+++.|+|..+...++..|.+++.++....+++.+
T Consensus        82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~  161 (412)
T 1yaa_A           82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL  161 (412)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred             HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCcc
Confidence            99999765665567889999  999999999884  34456999999999999999999999999999998733346789


Q ss_pred             CHHHHHhhhccC---ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC--CCCCCCcccC-CCC
Q 020968          172 DLDAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN--TPFVPMGVFG-SIV  245 (319)
Q Consensus       172 d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~-~~~  245 (319)
                      |++++++.++++   +.++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++  ....++..+. ..+
T Consensus       162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~  241 (412)
T 1yaa_A          162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLS  241 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCC
Confidence            999999988653   3445559999999999999999999999999999999999999988764  1222232221 123


Q ss_pred             ---CeEEEecCccccCCCcceeeEEE--e-e---CCCCCccchH----HHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          246 ---PVLTLGSISKRWIVPGWRLGWLV--T-S---DPNGILQDSG----IVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       246 ---~vi~~~s~sK~~~~~G~r~G~i~--~-~---~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                         ++++++|+||.|+.+|+|+||++  + +   +       ++    ++++++.... .+..++.+.|.++..++.
T Consensus       242 ~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~  311 (412)
T 1yaa_A          242 TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN-------KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLE  311 (412)
T ss_dssp             TTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH-------HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred             CCcceEEEeccCCCCCCcCCcceEEEEEecCCCCC-------HHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhC
Confidence               78999999999998899999998  6 1   2       23    6666666433 345668899998887553

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=1e-34  Score=267.90  Aligned_cols=278  Identities=16%  Similarity=0.219  Sum_probs=211.6

Q ss_pred             hHHHHhccccc-HHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----CCCCCCCCcCCHH
Q 020968           17 NEELKTASGIT-VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILP   91 (319)
Q Consensus        17 ~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~   91 (319)
                      +.++..+.++. +..+.++......+..++++|+|+.|+++    +++++.+.+++.+.+...    ....|++..|..+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~   79 (400)
T 3asa_A            4 NPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPA   79 (400)
T ss_dssp             CHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHH
T ss_pred             chhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHH
Confidence            56777776644 45566666655555567899999999975    577899999998877541    2357887789999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCe-EEEEeccCCCCCc
Q 020968           92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE-VRHFDLLPAKGWE  170 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~  170 (319)
                      +|+++++++.  +|. +++++|++|+|+++++..++. ++++||+|+++.|+|..+...++..|.+ ++.++.++++++.
T Consensus        80 lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  155 (400)
T 3asa_A           80 LRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFF  155 (400)
T ss_dssp             HHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTC
T ss_pred             HHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcc
Confidence            9999999974  343 678899999999999998765 4578999999999999999999999998 9999886544555


Q ss_pred             CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEE
Q 020968          171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLT  249 (319)
Q Consensus       171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~  249 (319)
                      .++++    + +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+.. .+++++
T Consensus       156 ~~l~~----~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (400)
T 3asa_A          156 PEFPE----D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE  230 (400)
T ss_dssp             CCCCT----T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEE
T ss_pred             cChhh----c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEE
Confidence            55432    1 46789999999999999999999999999999999999999999998876654445555542 357899


Q ss_pred             EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH-hhh-hcCCcchHHHHHHHHHHh
Q 020968          250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      ++|+||.|+++|+|+||++++++-....... +..+.. ... .+.+++.+.|.++..++.
T Consensus       231 ~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  290 (400)
T 3asa_A          231 INSFSKPLGFAGIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLS  290 (400)
T ss_dssp             EEECCGGGTTTTCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_pred             EecchhhcCCcchheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhC
Confidence            9999999999999999999865310000000 333322 222 234678999998887543

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=4.2e-36  Score=276.44  Aligned_cols=281  Identities=19%  Similarity=0.167  Sum_probs=205.9

Q ss_pred             HHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968           20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD   98 (319)
Q Consensus        20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   98 (319)
                      ++.++++.++.+...+.+.    .++++|+|+.|++ +.....++++.+.+++.+.+.......|++..|..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~   80 (396)
T 2q7w_A            5 ITAAPADPILGLADLFRAD----ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE   80 (396)
T ss_dssp             CCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred             cccCCCchHHHHHHHHhcc----CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHH
Confidence            4566677777776655432    2568999999984 2112246779999999887654445589888899999999999


Q ss_pred             HHhhhCCCCCCCCcEEE--eCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           99 YLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        99 ~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      ++....+..+++++|++  |+|+++|++.+++.+.  .+||+|+++.|+|..+...++..|.+++.++..+.+++.+|++
T Consensus        81 ~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  160 (396)
T 2q7w_A           81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD  160 (396)
T ss_dssp             HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred             HHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence            99654332245789998  9999999999987763  6999999999999999999999999999998865456789999


Q ss_pred             HHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC-CCCCCCcccC-CCCCeEE
Q 020968          175 AVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN-TPFVPMGVFG-SIVPVLT  249 (319)
Q Consensus       175 ~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~-~~~~vi~  249 (319)
                      ++++.+++   +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ....++..+. ..+++++
T Consensus       161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~  240 (396)
T 2q7w_A          161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV  240 (396)
T ss_dssp             HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred             HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEE
Confidence            99998864   35678889999999999999999999999999999999999999988753 1222333232 2357899


Q ss_pred             EecCccccCCCcceeeEEEe--eCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          250 LGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       250 ~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++|+||.|+++|+|+||+++  +++..   ..+++..+..... .+..++++.|.++..++
T Consensus       241 ~~s~sK~~~~~G~riG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  298 (396)
T 2q7w_A          241 ASSYSXNFGLYNERVGACTLVAADSET---VDRAFSQMKAAIRANYSNPPAHGASVVATIL  298 (396)
T ss_dssp             EEECTTTTTCGGGCCEEEEEECSSHHH---HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred             EEeccccccccccccceEEEEcCCHHH---HHHHHHHHHHHHhhccCCCCcHHHHHHHHHh
Confidence            99999999999999999986  33200   0124555554332 34456889998888744

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=3.4e-36  Score=280.36  Aligned_cols=254  Identities=16%  Similarity=0.214  Sum_probs=209.1

Q ss_pred             CCCeEeccCCCC-CCCCCCCCcHHH--HHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCc---EEEeC
Q 020968           44 TRPLIPLGHGDP-SAFPSFRTASVA--VDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD---VYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~-~~~~~~~~~~~~--~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~---i~~~~  117 (319)
                      .+++|+|+.|++ +    ++.++.+  .+++.+.+.......|++..|..++|+++++++.+.. .++++++   |++|+
T Consensus        46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~  120 (430)
T 2x5f_A           46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN  120 (430)
T ss_dssp             TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred             CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence            467999999997 6    3445555  6666655543235689888899999999999998764 6677888   99999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh-CCCeEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATH-SHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPG  193 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~  193 (319)
                      |+++|+..++++++++||+|+++.|+|..+...++. .|.+++.++.++.+ +.+|++++++.+++   +++++++++|+
T Consensus       121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~  199 (430)
T 2x5f_A          121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPN  199 (430)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred             CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence            999999999999999999999999999999999999 99999999886543 78999999999876   78899999999


Q ss_pred             CccccccCHHHHHHHHHHHHH-----cCCEEEEeCCCCCccCCCCCCCCCc-ccCC-CCC---eEEEecCccccCCCcce
Q 020968          194 NPCGNVYTYQHLQKIAETAKK-----LGIMVIADEVYDHLAFGNTPFVPMG-VFGS-IVP---VLTLGSISKRWIVPGWR  263 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~-----~~~~li~D~a~~~~~~~~~~~~~~~-~~~~-~~~---vi~~~s~sK~~~~~G~r  263 (319)
                      ||||.+++.+++++|+++|++     +|+++|+||+|.++.+++..+.++. .+.. .++   +++++|+||.|+++|+|
T Consensus       200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  279 (430)
T 2x5f_A          200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFR  279 (430)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred             CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCC
Confidence            999999999999999999999     9999999999999988775444544 4432 467   89999999999999999


Q ss_pred             eeEEEeeCCCCCccchHHHHHHHHhhh-----hcCCcchHHHHHHHHHHh
Q 020968          264 LGWLVTSDPNGILQDSGIVDSIKSFLN-----ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       264 ~G~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~~~~~~l~  308 (319)
                      +||+++.++     ++++++++.....     ...+++++.|.++..++.
T Consensus       280 iG~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~  324 (430)
T 2x5f_A          280 VGFMTFGTS-----DQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK  324 (430)
T ss_dssp             CEEEEEBCC-----CHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred             eEEEEEecC-----CHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence            999998211     1357777766543     345678999999888554

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=3.1e-35  Score=271.95  Aligned_cols=283  Identities=14%  Similarity=0.070  Sum_probs=207.9

Q ss_pred             chHHHHh---cccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968           16 ANEELKT---ASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP   91 (319)
Q Consensus        16 ~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (319)
                      .+++.+.   .+++.|.++.+.+++    .+. +.|||++|.+ +.....+..+.+++|.+..++......|.|..|.++
T Consensus        17 ~~~~~~~v~~~p~d~i~~l~~~~~~----d~~-~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~   91 (420)
T 4h51_A           17 TAERWQKIQAQAPDVIFDLAKRAAA----AKG-PKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQP   91 (420)
T ss_dssp             HHHHHHTCCCCCCCHHHHHHHHHHH----CCS-SCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHH
T ss_pred             hhHHHhCCCCCCCChHHHHHHHHhc----CCC-CCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHH
Confidence            3555544   456678877766543    333 4899999942 222345677999999888777666567999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCc--EEEeCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcchHHHHhhCCCe-EEEEecc
Q 020968           92 ARRAIADYLNRDLPYKLSPDD--VYLTLGCTQAIEVILTVL----ARPGANILLPRPGFPYYEARATHSHLE-VRHFDLL  164 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~~--i~~~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~  164 (319)
                      ||+++++++...   ....+.  .+-|.|+|.|+..++..+    .++||+|++++|+|++|..+++..|.+ +..++..
T Consensus        92 lr~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~  168 (420)
T 4h51_A           92 FIDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYY  168 (420)
T ss_dssp             HHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECE
T ss_pred             HHHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccc
Confidence            999999998442   333333  355889998887776654    469999999999999999999999997 4445555


Q ss_pred             CCCCCcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc--
Q 020968          165 PAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG--  239 (319)
Q Consensus       165 ~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~--  239 (319)
                      +.+.+.+|.+.+.+.+.   ++++++++++||||||.+++.+++++|+++|+++++++|+|++|.+|.+++....+..  
T Consensus       169 ~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~  248 (420)
T 4h51_A          169 DPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAAR  248 (420)
T ss_dssp             EGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred             cccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHH
Confidence            55667889888887664   4567778889999999999999999999999999999999999999998753322211  


Q ss_pred             -ccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          240 -VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       240 -~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                       .....++++++.||||.|+++|+|+||++++.+.... ...+...+.... ..+++++...|.+++.++
T Consensus       249 ~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l  317 (420)
T 4h51_A          249 LFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLIL  317 (420)
T ss_dssp             HHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred             hHHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHh
Confidence             1234467899999999999999999999987653100 011222233232 245677888888888744

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=6.5e-35  Score=265.52  Aligned_cols=240  Identities=21%  Similarity=0.281  Sum_probs=204.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +.+++|+|+.|++.    +++++.+.+++.+.+..  ...|+ ..+..++|+++++++      +++++++++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a   96 (363)
T 3ffh_A           30 GLTKITKLSSNENP----LGTSKKVAAIQANSSVE--TEIYP-DGWASSLRKEVADFY------QLEEEELIFTAGVDEL   96 (363)
T ss_dssp             TCSCCEECSSCSCT----TCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHHHHH--hhcCC-CcchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence            45789999999875    67899999999887643  44665 468899999999999      4578899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +..++++++++||+|+++.|+|..+...++..|.+++.++.++  ++.+|++++++++++++++|++++|+||||.+++.
T Consensus        97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~  174 (363)
T 3ffh_A           97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL  174 (363)
T ss_dssp             HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence            9999999999999999999999999999999999999999864  57899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++.++++.|++ |+++|+|++|.++.+ +............+++++++|+||.++++|+|+||++++        ++++
T Consensus       175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~  244 (363)
T 3ffh_A          175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD--------KEII  244 (363)
T ss_dssp             HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC--------HHHH
T ss_pred             HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC--------HHHH
Confidence            999999998888 999999999999887 444444444455678999999999999999999999984        3588


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ++++..... .+++.+.|.++..++.
T Consensus       245 ~~l~~~~~~-~~~~~~~~~~~~~~l~  269 (363)
T 3ffh_A          245 RQLNIVRPP-FNTTSIGQKLAIEAIK  269 (363)
T ss_dssp             HHHHHTCCS-CCCBHHHHHHHHHHHH
T ss_pred             HHHHHhCCC-CCCCHHHHHHHHHHhc
Confidence            888776653 4678899988888553

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=3.2e-35  Score=266.51  Aligned_cols=242  Identities=17%  Similarity=0.224  Sum_probs=207.8

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      ..+.++|+|+.|++.    +++++.+.+++.+.+..  ...|+ ..+.+++|+++++++      +++++++++|+|+++
T Consensus        13 ~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~~~   79 (354)
T 3ly1_A           13 PSTDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYA-KNEILMLGNKLAAHH------QVEAPSILLTAGSSE   79 (354)
T ss_dssp             CCSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCC-HHHHHHHHHHHHHHT------TSCGGGEEEESHHHH
T ss_pred             CCCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCC-CCchHHHHHHHHHHh------CCChHHEEEeCChHH
Confidence            457789999999865    67899999999998764  45775 457899999999998      457889999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcCCCCccccc
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINPGNPCGNV  199 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~  199 (319)
                      ++..++++++++||+|+++.|+|..+...++..|.+++.++.++  ++.+|+++++++++  +++++|++++|+||||.+
T Consensus        80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~  157 (354)
T 3ly1_A           80 GIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTI  157 (354)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCC
Confidence            99999999999999999999999999999999999999998753  47899999999998  789999999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC-CCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~-~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                      ++.+++.+|+++| ++|+++|+|++|.++.+++.....+...... +++++++|+||.++++|+|+||++++        
T Consensus       158 ~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------  228 (354)
T 3ly1_A          158 TPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH--------  228 (354)
T ss_dssp             CCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC--------
T ss_pred             cCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC--------
Confidence            9999999999999 8999999999999988876544444434444 78899999999999999999999984        


Q ss_pred             hHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          279 SGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ++++++++..... .+++++.|.++..++.
T Consensus       229 ~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~  257 (354)
T 3ly1_A          229 PTVIALMGRYVAG-EKINFSGVDAALASMN  257 (354)
T ss_dssp             HHHHHHHGGGTTC-SCCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCC-CCCCHHHHHHHHHHhc
Confidence            2577777766654 5678899988888543

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=2e-35  Score=271.85  Aligned_cols=279  Identities=19%  Similarity=0.188  Sum_probs=215.1

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCC-CCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPS-AFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      +++.++++.++.+.+.+.+.    .++++|+|+.|.+. .....++++.+.+++.+.+.......|++..|..++|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la   79 (394)
T 2ay1_A            4 NLKPQAPDKILALMGEFRAD----PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMG   79 (394)
T ss_dssp             GCCCCCCCSHHHHHHHHHHC----CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHH
T ss_pred             cCccCCCccHHHHHHHHHhC----CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHH
Confidence            46678888898888766532    36789999999852 11224678999999988775444568988889999999999


Q ss_pred             HHHhhhCCCCCCCCcEEE--eCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           98 DYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        98 ~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      +++...   .+++++|++  |+|+++|+..+++.+..  +||+|+++.|+|..+...++..|.+++.++.++.+++.+|+
T Consensus        80 ~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  156 (394)
T 2ay1_A           80 ELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF  156 (394)
T ss_dssp             HHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECH
T ss_pred             HHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCH
Confidence            998431   236789999  99999999999988754  99999999999999999999999999999986545678999


Q ss_pred             HHHHhhhccC---ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCCcccC-CCCCeE
Q 020968          174 DAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFG-SIVPVL  248 (319)
Q Consensus       174 ~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~-~~~~vi  248 (319)
                      +++++.+++.   ++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+. ..++++
T Consensus       157 ~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i  236 (394)
T 2ay1_A          157 EGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVL  236 (394)
T ss_dssp             HHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEE
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEE
Confidence            9999988643   56677899999999999999999999999999999999999999887531 111222221 135689


Q ss_pred             EEecCccccCCCcceeeEEEe--eCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          249 TLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       249 ~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      +++|+||.|+++|+|+||+++  +++..   ...+...++... ..+..++++.|.++..++
T Consensus       237 ~~~s~sK~~~~~G~riG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l  295 (394)
T 2ay1_A          237 IAASCSKNFGIYRERTGCLLALCADAAT---RELAQGAMAFLNRQTYSFPPFHGAKIVSTVL  295 (394)
T ss_dssp             EEEECTTTTTCGGGCEEEEEEECSSHHH---HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHH
T ss_pred             EEEeccCCCcCcCCccceEEEEeCCHHH---HHHHHHHHHHHHhhhcCCCChHHHHHHHHHh
Confidence            999999999999999999997  33210   001233333322 234456889998887754

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=6.2e-35  Score=265.87  Aligned_cols=241  Identities=15%  Similarity=0.245  Sum_probs=204.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +.+++|+|+.|++.    +++++.+.+++.+.+..  ...|++..+ .++|+++++++      ++++++|++|+|++++
T Consensus        28 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a   94 (365)
T 3get_A           28 GVKEVIKLASNENP----FGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQV   94 (365)
T ss_dssp             TCSCCEECSSCCCT----TCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred             CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence            34789999999866    67899999999998763  457877655 89999999999      4578899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ++.++.+++++||+|+++.|+|..+...++..|.+++.++. ..+++ +|++++++++++++++|++++|+||||.+++.
T Consensus        95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~  172 (365)
T 3get_A           95 IEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDA  172 (365)
T ss_dssp             HHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCH
Confidence            99999999999999999999999999999999999999987 34567 99999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccC--CCCCCC-CCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~--~~~~~~-~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                      +++.+++++| ++|+++|+|++|.++.+  .+..+. ........+++++++|+||.|+++|+|+||++++        +
T Consensus       173 ~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~  243 (365)
T 3get_A          173 SEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN--------A  243 (365)
T ss_dssp             HHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC--------H
T ss_pred             HHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC--------H
Confidence            9999999998 56999999999998874  333222 2222334567899999999999999999999984        3


Q ss_pred             HHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          280 GIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      +++++++..... .+++.+.|.++..++.
T Consensus       244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  271 (365)
T 3get_A          244 NIISAFYKLRAP-FNVSNLALKAAVAAMD  271 (365)
T ss_dssp             HHHHHHHHHSCT-TCSCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCC-CCcCHHHHHHHHHHhC
Confidence            588888776654 3578899998888554

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=2e-34  Score=268.23  Aligned_cols=250  Identities=21%  Similarity=0.364  Sum_probs=204.0

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhh---------c-CCCCCCCCCcCCHHHHHHHHHHHhhhCCCC--CCCCc
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR---------S-ARFNCYSSTVGILPARRAIADYLNRDLPYK--LSPDD  112 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~---------~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~--~~~~~  112 (319)
                      .++|+|+.+...    + .++.+.+++.+...         . .....|++..|..++|+++++++.+.+|..  +++++
T Consensus        36 ~~~i~l~~~~~~----~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~  110 (428)
T 1iay_A           36 NGVIQMGLAENQ----L-CLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER  110 (428)
T ss_dssp             TSBEECSSCCCC----S-SHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred             Cceeeeccccch----h-hHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence            478999987643    2 34678888775321         0 113578887789999999999999877765  77899


Q ss_pred             EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-hhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------Cce
Q 020968          113 VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA-THSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV  185 (319)
Q Consensus       113 i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~  185 (319)
                      |++|+|+++++..++++++++||+|+++.|+|..+...+ ...|.+++.++.+.+++|.+|++++++++++      +++
T Consensus       111 i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~  190 (428)
T 1iay_A          111 VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVK  190 (428)
T ss_dssp             CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred             EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceE
Confidence            999999999999999999999999999999999987644 4689999999886556788999999998863      678


Q ss_pred             EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--------CCCeEEEecCcccc
Q 020968          186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--------IVPVLTLGSISKRW  257 (319)
Q Consensus       186 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--------~~~vi~~~s~sK~~  257 (319)
                      +|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+..        .++++++.|+||.|
T Consensus       191 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~  270 (428)
T 1iay_A          191 GLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM  270 (428)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred             EEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence            8999999999999999999999999999999999999999998876654444444332        47899999999999


Q ss_pred             CCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       258 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      +++|+|+||+++++       ++++++++..... ...++++|.++..++
T Consensus       271 g~~Glr~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~a~~~~l  312 (428)
T 1iay_A          271 GLPGFRVGIIYSFN-------DDVVNCARKMSSF-GLVSTQTQYFLAAML  312 (428)
T ss_dssp             SCGGGCEEEEEESC-------HHHHHHHHHHHTT-SCCCHHHHHHHHHHT
T ss_pred             CCCCceEEEEEeCC-------HHHHHHHHHHHhc-ccCCHHHHHHHHHHh
Confidence            99999999999854       2477777765443 457889999888744

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=3.7e-34  Score=267.61  Aligned_cols=277  Identities=20%  Similarity=0.281  Sum_probs=213.5

Q ss_pred             CchHHHHhc-ccccHHHHHHHHHHHhhhcCCCCeE-eccCCCCCCCCCCCCcHHHHHHHHHHhhc-------CC----CC
Q 020968           15 KANEELKTA-SGITVRGVLNSLLENLNKNDTRPLI-PLGHGDPSAFPSFRTASVAVDAIVHSVRS-------AR----FN   81 (319)
Q Consensus        15 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-------~~----~~   81 (319)
                      ++|.+.+++ .++.++.++..+.+..   ..+++| +|+.|.|+..  ....+.+.+++.+.+..       ..    ..
T Consensus         3 ~~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (444)
T 3if2_A            3 KFSKFGQKFTQPTGISQLMDDLGDAL---KSDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAIISMA   77 (444)
T ss_dssp             CCCHHHHHHHSCCHHHHHHHHHHHHH---HSSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHH
T ss_pred             CcchhhhhccCchhHHHHHHHHHhhh---cCchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhhhhh
Confidence            456665444 4468888887776554   247899 9999998720  11125566666666544       21    24


Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC--------------EEEEc-CCCCcc
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA--------------NILLP-RPGFPY  146 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd--------------~Vl~~-~p~~~~  146 (319)
                      .|++..|.+++|+++++++.+.+|..+++++|++|+|+++|+++++++++++||              +|+++ .|+|..
T Consensus        78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~  157 (444)
T 3if2_A           78 NYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIG  157 (444)
T ss_dssp             SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGG
T ss_pred             ccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccc
Confidence            799888999999999999998889889999999999999999999999998887              78876 899998


Q ss_pred             hHHH------HhhCCCeEEEEeccCCC---CCcCCHHHHHhh---hccCceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968          147 YEAR------ATHSHLEVRHFDLLPAK---GWEVDLDAVEAL---ADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK  214 (319)
Q Consensus       147 ~~~~------~~~~g~~~~~~~~~~~~---~~~~d~~~l~~~---l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  214 (319)
                      +...      +...|..++.++.+.++   +|.+|++.++++   +.+++++|++++|+||||.+++.+++++|+++|++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~  237 (444)
T 3if2_A          158 YSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKR  237 (444)
T ss_dssp             GTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             hhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            8763      34567788878765422   367999999998   67788999999999999999999999999999999


Q ss_pred             cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcC
Q 020968          215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISS  293 (319)
Q Consensus       215 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~  293 (319)
                      +|+++|+|++|+.+.... ...... ....+++++++|+||. +++|+|+||++++.        ++++++..... ...
T Consensus       238 ~~~~li~De~~~~~~~~~-~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~  306 (444)
T 3if2_A          238 YDIPLIIDNAYGMPFPNI-IYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNAVVNL  306 (444)
T ss_dssp             TTCCEEEECTTCTTTTCC-BCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCccccc-cccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHHhccC
Confidence            999999999998643211 111110 1224678999999997 89999999999853        57888877665 345


Q ss_pred             CcchHHHHHHHHHH
Q 020968          294 DPATFIQFLKSSRK  307 (319)
Q Consensus       294 ~~~~~~q~~~~~~l  307 (319)
                      .++++.|.+++..+
T Consensus       307 ~~~~~~~~a~~~~l  320 (444)
T 3if2_A          307 APTRFGAAIATPLV  320 (444)
T ss_dssp             SCCCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHH
Confidence            67889998888744

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=3.5e-34  Score=267.20  Aligned_cols=251  Identities=22%  Similarity=0.367  Sum_probs=207.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----------CCCCCCCcCCHHHHHHHHHHHhhhCC--CCCCC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----------FNCYSSTVGILPARRAIADYLNRDLP--YKLSP  110 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~  110 (319)
                      ...+|+|+.+...     ...+.+.+++.+......           ...|++..|.++||+++++++.+.++  ..+++
T Consensus        37 p~~~i~lg~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~  111 (435)
T 3piu_A           37 TNGIIQMGLAENQ-----LCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP  111 (435)
T ss_dssp             TTSBEECSSCCCC-----SSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred             CCCeEEecccccc-----ccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH
Confidence            4458899997633     346778887776543211           14699888999999999999985444  55678


Q ss_pred             CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhcc------C
Q 020968          111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------N  183 (319)
Q Consensus       111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~  183 (319)
                      ++|++|+|+++|+..++.+++++||+|+++.|+|..+...+. ..|.+++.++.++.++|.+|++.+++++++      +
T Consensus       112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  191 (435)
T 3piu_A          112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR  191 (435)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred             HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999888777 789999999988777788999999999875      7


Q ss_pred             ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC----------CCCeEEEecC
Q 020968          184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS----------IVPVLTLGSI  253 (319)
Q Consensus       184 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~----------~~~vi~~~s~  253 (319)
                      +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..+..          .+++++++|+
T Consensus       192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~  271 (435)
T 3piu_A          192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL  271 (435)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred             eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence            889999999999999999999999999999999999999999998887766555444322          4678999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ||.|+++|+|+||++++++       .+.+.++..... ...+++.|.+++.++
T Consensus       272 sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~l  317 (435)
T 3piu_A          272 SKDLGLPGFRVGAIYSNDD-------MVVAAATKMSSF-GLVSSQTQHLLSAML  317 (435)
T ss_dssp             SSSSCCGGGCEEEEEESCH-------HHHHHHHHHGGG-SCCCHHHHHHHHHHH
T ss_pred             ecccCCCceeEEEEEeCCH-------HHHHHHHHHhhc-CCCCHHHHHHHHHHh
Confidence            9999999999999998652       466666655543 356788898887744

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=1.1e-33  Score=257.90  Aligned_cols=240  Identities=20%  Similarity=0.318  Sum_probs=204.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCC-CCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKL-SPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~~~G~t~  121 (319)
                      ..+++|+|+.|++.    +++++.+.+++.+.+.......|+. .+..++|+++++++      ++ ++++|++|+|+++
T Consensus        28 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~   96 (367)
T 3euc_A           28 DSHGLVKLDAMENP----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDE   96 (367)
T ss_dssp             CCTTCEECCSSCCC----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHH
T ss_pred             CCCCeeEccCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHH
Confidence            35689999999965    6789999999999887544557876 48899999999998      33 6789999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCcccccc
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVY  200 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~  200 (319)
                      +++.++++++++||+|+++.|+|..+...++..|.+++.++.++  ++.+|++++++++++ ++++|++++|+||||.++
T Consensus        97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~  174 (367)
T 3euc_A           97 IISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF  174 (367)
T ss_dssp             HHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999864  578999999999987 899999999999999999


Q ss_pred             CHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          201 TYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                      +.+++++|+++|+++  |+++|+|++|.++...+    ....+...+++++++|+||. +++|+|+||++++.       
T Consensus       175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~----~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~-------  242 (367)
T 3euc_A          175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES----WMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP-------  242 (367)
T ss_dssp             CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC----SGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECH-------
T ss_pred             CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc----hHHHHhhCCCEEEEecchhh-cccccCceeeeeCH-------
Confidence            999999999999999  99999999999976432    12233445678999999999 99999999999843       


Q ss_pred             hHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          279 SGIVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                       +++++++..... .+.+++.|.++..++..
T Consensus       243 -~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~  271 (367)
T 3euc_A          243 -QWLEQLDKVRPP-YNVNVLTEATALFALEH  271 (367)
T ss_dssp             -HHHHHHGGGCCS-SCCCHHHHHHHHHHHTT
T ss_pred             -HHHHHHHHhCCC-CCCCHHHHHHHHHHhcC
Confidence             577777665543 45788999888885543

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=7.8e-35  Score=270.98  Aligned_cols=246  Identities=17%  Similarity=0.148  Sum_probs=198.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHH--HHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAI--VHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      .+.+|+|+.|.|+. ..++.++.+.+++  .+.+...  ...+|++..|.++||+++++++      ++++++|++|+|+
T Consensus        32 ~~~~i~~~~G~p~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~  104 (427)
T 3ppl_A           32 KNLKLDLTRGKPSS-EQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS  104 (427)
T ss_dssp             TCCCEECCCCSCCH-HHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCCh-HHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence            45789999999872 1112223455555  4444332  3568998889999999999999      4688999999999


Q ss_pred             HHHH--HHHHHHhcC--C----------CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCc
Q 020968          120 TQAI--EVILTVLAR--P----------GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENT  184 (319)
Q Consensus       120 t~ai--~~~~~~l~~--~----------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~  184 (319)
                      ++++  .++++++++  +          ||+|+++.|+|..+...++..|.+++.++.+.+   ++|++.++++++ +++
T Consensus       105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~  181 (427)
T 3ppl_A          105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV  181 (427)
T ss_dssp             HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred             HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence            9999  588888876  6          899999999999999999999999999998653   499999999984 567


Q ss_pred             eEEEEc-CCCCccccccCHHHHHHHHHHH-HHcCCEEEEeCCCCCccCCCCCCC--CCccc----CCCCCeEEEecCccc
Q 020968          185 VALVII-NPGNPCGNVYTYQHLQKIAETA-KKLGIMVIADEVYDHLAFGNTPFV--PMGVF----GSIVPVLTLGSISKR  256 (319)
Q Consensus       185 ~~v~l~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~D~a~~~~~~~~~~~~--~~~~~----~~~~~vi~~~s~sK~  256 (319)
                      ++|+++ +||||||.+++.+++++|+++| +++|++||+||+|.++.|++....  ++..+    +..+++++++||||+
T Consensus       182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~  261 (427)
T 3ppl_A          182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI  261 (427)
T ss_dssp             EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred             eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence            777755 7799999999999999999999 999999999999999887665432  33332    245789999999999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                       ++||+|+||++++.        ++++.+..... ...+++++.|.+++.++.
T Consensus       262 -~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~  305 (427)
T 3ppl_A          262 -TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFG  305 (427)
T ss_dssp             -SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHC
T ss_pred             -cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHh
Confidence             89999999999853        57888877665 356789999999888443

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=3.4e-33  Score=254.45  Aligned_cols=237  Identities=20%  Similarity=0.298  Sum_probs=195.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|++.    +++++.+.+++.+.+..  ...|+. .+..++|+++++++      ++++++|++|+|+++++
T Consensus        23 ~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~al   89 (364)
T 1lc5_A           23 PDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESI   89 (364)
T ss_dssp             GGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             ccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHHH
Confidence            4579999999854    56789999999988754  357865 48899999999999      45678999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..+++++  +||+|+++.|+|..+...++..|.+++.++.+..+++.+ ++++.+.+.++++++++++|+||||.+++.+
T Consensus        90 ~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~  166 (364)
T 1lc5_A           90 FTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERP  166 (364)
T ss_dssp             HHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence            9999998  779999999999999999999999999998865345444 5656666666788999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE-eeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~~~~  282 (319)
                      ++++|+++|+++|+++|+||+|..+.+++..  .+......+++++++|+||.++++|+|+||++ ++        ++++
T Consensus       167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~  236 (364)
T 1lc5_A          167 LLQAIADRCKSLNINLILDEAFIDFIPHETG--FIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--------DAAM  236 (364)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCC--SGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--------HHHH
T ss_pred             HHHHHHHHhhhcCcEEEEECcChhhccCccc--hhhHhccCCCEEEEEECchhhcCCccceEEEEECC--------HHHH
Confidence            9999999999999999999999998875322  22223445678999999999999999999999 63        3577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++..... .++++++|.++..++
T Consensus       237 ~~l~~~~~~-~~~~~~~~~~~~~~l  260 (364)
T 1lc5_A          237 ARMRRQQMP-WSVNALAALAGEVAL  260 (364)
T ss_dssp             HHHHHHSCT-TCSCHHHHHHHHHGG
T ss_pred             HHHHHhCCC-CCCCHHHHHHHHHHH
Confidence            777765543 467889998888744

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=2.8e-33  Score=254.35  Aligned_cols=236  Identities=19%  Similarity=0.304  Sum_probs=198.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +++++|+|+.|.+.    +++++.+.+++.+.+..  ...|+ ..+..++|+++++++      +++++++++|+|++++
T Consensus        24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a   90 (361)
T 3ftb_A           24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYP-DVNYRRLNKSIENYL------KLKDIGIVLGNGASEI   90 (361)
T ss_dssp             ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCC-CTTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred             CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCC-CccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence            46789999999865    57889999999998875  34675 468899999999999      4578899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ++.+++++    |+|+++.|+|..+...++..|.+++.++.++..  .++++++++++++ ++++++++|+||||.+++.
T Consensus        91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~  163 (361)
T 3ftb_A           91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINK  163 (361)
T ss_dssp             HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred             HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence            99999888    899999999999999999999999999986543  4777999999987 8999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++++|+++|+++|+++|+|++|.++.++ ............+++++++|+||.++++|+|+||+++.+       ++++
T Consensus       164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~  235 (361)
T 3ftb_A          164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA  235 (361)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred             HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence            99999999999999999999999998876 333344444556789999999999999999999998433       3577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++..... .+++++.|.++..++
T Consensus       236 ~~~~~~~~~-~~~~~~~~~~~~~~l  259 (361)
T 3ftb_A          236 AKIKAKQNP-WNINCFAEMAAINCL  259 (361)
T ss_dssp             HHHHTTSCT-TCSCHHHHHHHHHTS
T ss_pred             HHHHhhCCC-CCCCHHHHHHHHHHh
Confidence            877766553 467888888888744

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=6.8e-37  Score=281.72  Aligned_cols=256  Identities=16%  Similarity=0.283  Sum_probs=214.1

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      +++++|+.|+++    +++++.+.+++.+.+... ...|++.  ..++|+++++++.+.+|..+++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~  103 (392)
T 3b1d_A           31 PQLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAIS  103 (392)
Confidence            489999999976    678899999999887543 3467754  789999999999887787788899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ++++++.++||+|+++.|+|..+...++..|.+++.++.++. ++|.+|++.+++.++ .+++++++++|+||||.+++.
T Consensus       104 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  183 (392)
T 3b1d_A          104 IAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWER  183 (392)
Confidence            999999999999999999999999999999999988887533 347799999999887 577889999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                      +++++|+++|+++|+++|+||+|.++.+++..+.++..+..  .+++++++|+||.|+++|+|+||++++++       +
T Consensus       184 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~  256 (392)
T 3b1d_A          184 EVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------T  256 (392)
Confidence            99999999999999999999999999987765556655544  56889999999999999999999998753       2


Q ss_pred             HHHHHHHhhhhc--CCcchHHHHHHHHHHhcccccc
Q 020968          281 IVDSIKSFLNIS--SDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       281 ~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      +++.++.....+  .+++++.|.++..++...+++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~  292 (392)
T 3b1d_A          257 LCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWL  292 (392)
Confidence            667776655432  3568888888777554333343

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=7.1e-34  Score=263.26  Aligned_cols=265  Identities=22%  Similarity=0.278  Sum_probs=192.7

Q ss_pred             ccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC----CCCCCCCcCCHHHHHHHHHH
Q 020968           24 SGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYSSTVGILPARRAIADY   99 (319)
Q Consensus        24 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~   99 (319)
                      .++.++..+..+.+   ...++++|+|+.|.|+..  ..+.+.+.+++.+.+....    ...|++..|.++||++++++
T Consensus        13 ~~~~~~~~~~~~~~---~~~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~   87 (417)
T 3g7q_A           13 RHSGITRLMEDLND---GLRTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVL   87 (417)
T ss_dssp             ---CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHh---hccCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHH
Confidence            34566666554432   234578999999998721  1112567777776654421    23799888999999999999


Q ss_pred             HhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC-----EEEEc-CCCCcchHHHHhhC------CCeEEEEeccCCC
Q 020968          100 LNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA-----NILLP-RPGFPYYEARATHS------HLEVRHFDLLPAK  167 (319)
Q Consensus       100 ~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd-----~Vl~~-~p~~~~~~~~~~~~------g~~~~~~~~~~~~  167 (319)
                      +.+.+|..+++++|++|+|+++|+++++++++++||     +|+++ .|+|..+...+...      +..+..++.+ ..
T Consensus        88 ~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  166 (417)
T 3g7q_A           88 LRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG-QF  166 (417)
T ss_dssp             HHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGG-EE
T ss_pred             HHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCc-cc
Confidence            998888889999999999999999999999999987     89997 99999887665322      2333333321 12


Q ss_pred             CCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCe
Q 020968          168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV  247 (319)
Q Consensus       168 ~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~v  247 (319)
                      ++.+|++.++  +.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+..+. ...... ....+++
T Consensus       167 ~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~-~~~~~~~  242 (417)
T 3g7q_A          167 KYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEAR-PLWNPNI  242 (417)
T ss_dssp             EEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCC-CCCCTTE
T ss_pred             ccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccc-cCCCCCE
Confidence            4678998887  66788999999999999999999999999999999999999999998643211 111111 1224679


Q ss_pred             EEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       248 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++++|+|| ++++|+|+||++++.        +++++++.... ...+++++.|.+++.++
T Consensus       243 i~~~s~sK-~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  294 (417)
T 3g7q_A          243 ILCMSLSK-LGLPGSRCGIIIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMI  294 (417)
T ss_dssp             EEEEESGG-GTCTTSCCEEEECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHH
T ss_pred             EEEEechh-ccCCCcceEEEEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHH
Confidence            99999999 599999999999853        58888877665 34567889999888844

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=2.2e-33  Score=255.25  Aligned_cols=227  Identities=19%  Similarity=0.329  Sum_probs=189.6

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .++|+|+.|.+.    +++++.+      .+  ....+|++. +..++|+++++++      ++++++|++|+|+++++.
T Consensus        29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~   89 (356)
T 1fg7_A           29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE   89 (356)
T ss_dssp             TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred             CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence            468999999865    4555554      12  234678765 5899999999999      457789999999999999


Q ss_pred             HHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          125 VILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       125 ~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      .++++++++| |+|+++.|+|..+...++..|.+++.++.+  ++|.+|++++++.++ +++++++++|+||||.+++.+
T Consensus        90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~  166 (356)
T 1fg7_A           90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ  166 (356)
T ss_dssp             HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999 999999999999999999999999988875  457899999999887 889999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++++++++|+ +|+++|+||+|.++.. +   .++..+ ...+++++++|+||.|+++|+|+||++++        ++++
T Consensus       167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~  233 (356)
T 1fg7_A          167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI  233 (356)
T ss_dssp             HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred             HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC--------HHHH
Confidence            9999999999 9999999999998762 1   222222 44567999999999999999999999984        2578


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++.....+ ++++++|.++..++
T Consensus       234 ~~l~~~~~~~-~~~~~~~~a~~~~l  257 (356)
T 1fg7_A          234 NLLMKVIAPY-PLSTPVADIAAQAL  257 (356)
T ss_dssp             HHHHHHSCSS-CSCHHHHHHHHHHT
T ss_pred             HHHHHhcCCC-CCCHHHHHHHHHHh
Confidence            8887765543 67889998887744

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=5.4e-34  Score=265.04  Aligned_cols=244  Identities=19%  Similarity=0.189  Sum_probs=195.9

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHh--hc-CCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSV--RS-ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~--~~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+|+|+.|+|+. ..+++++.+.+++.+.+  .. ....+|++..|.++||+++++++      ++++++|++|+|++++
T Consensus        33 ~~i~l~~g~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a  105 (422)
T 3d6k_A           33 LSLDLTRGKPSA-EQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN  105 (422)
T ss_dssp             CCEECCCCSCCH-HHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred             CeEeCCCCCCCh-hhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence            489999999751 01355667777776542  12 23568999889999999999999      4678999999999999


Q ss_pred             H--HHHHHHhcCC------------CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEE
Q 020968          123 I--EVILTVLARP------------GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVAL  187 (319)
Q Consensus       123 i--~~~~~~l~~~------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v  187 (319)
                      +  .++++.+.++            +|+|+++.|+|..+...++..|.+++.++.+.+   ++|++.+++.+++ ++++|
T Consensus       106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v  182 (422)
T 3d6k_A          106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM  182 (422)
T ss_dssp             HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred             HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence            7  6777877655            357999999999999999999999999998653   3899999999875 67887


Q ss_pred             E-EcCCCCccccccCHHHHHHHHHHHH-HcCCEEEEeCCCCC--ccCCCCCCCCCcc----cCCCCCeEEEecCccccCC
Q 020968          188 V-IINPGNPCGNVYTYQHLQKIAETAK-KLGIMVIADEVYDH--LAFGNTPFVPMGV----FGSIVPVLTLGSISKRWIV  259 (319)
Q Consensus       188 ~-l~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~D~a~~~--~~~~~~~~~~~~~----~~~~~~vi~~~s~sK~~~~  259 (319)
                      + +++||||||.+++.+++++|+++|+ ++|++||+||+|..  +.+++....++..    .+..+++++++||||+ ++
T Consensus       183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~  261 (422)
T 3d6k_A          183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH  261 (422)
T ss_dssp             EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence            7 6899999999999999999999999 99999999999986  4444333334422    2445789999999999 89


Q ss_pred             CcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       260 ~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                      ||+|+||++++.        +++++++.... ...+++.+.|.+++.++.
T Consensus       262 ~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~  303 (422)
T 3d6k_A          262 AGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFG  303 (422)
T ss_dssp             TTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHC
T ss_pred             cccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHh
Confidence            999999999853        58888887665 355789999999888543

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.7e-33  Score=269.28  Aligned_cols=214  Identities=19%  Similarity=0.298  Sum_probs=178.2

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHH-hhhCCCCC---CCCcEEEeCCHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL-NRDLPYKL---SPDDVYLTLGCTQA  122 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~-~~~~g~~~---~~~~i~~~~G~t~a  122 (319)
                      +|+|+.|.+.    + +++.+.+++.+.+..   ..|++..|..++|+++++++ .+..+...   ++++|++|+|++++
T Consensus       106 ~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~ea  177 (546)
T 2zy4_A          106 SLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAA  177 (546)
T ss_dssp             HHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHH
T ss_pred             hhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHH
Confidence            7899999976    4 456677777776642   47999889999999987765 44443322   46899999999999


Q ss_pred             HHHHHHH-----hcCCCCEEEEcCCCCcchHHHHhh--CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968          123 IEVILTV-----LARPGANILLPRPGFPYYEARATH--SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP  195 (319)
Q Consensus       123 i~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np  195 (319)
                      +..++++     ++++||+|++++|+|..|...+..  .|++++.++.+++++|.+|++.+++.+.++++++++++|+||
T Consensus       178 l~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NP  257 (546)
T 2zy4_A          178 MAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNP  257 (546)
T ss_dssp             HHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSS
T ss_pred             HHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCC
Confidence            9999988     578999999999999999887654  468888898877778899999999988778899999999999


Q ss_pred             cccccCHHHHHHHHHHH--HHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          196 CGNVYTYQHLQKIAETA--KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       196 tG~~~~~~~l~~i~~~~--~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ||.+++.+++++|+++|  +++|++||+||+|.++.++   +.++.... .+++|+++||||.|+++|+|+||++++++
T Consensus       258 tG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~  332 (546)
T 2zy4_A          258 PSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQ  332 (546)
T ss_dssp             SCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred             CCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCH
Confidence            99999999999999999  7899999999999998753   23333332 35799999999999999999999999764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=8.9e-34  Score=263.37  Aligned_cols=247  Identities=19%  Similarity=0.273  Sum_probs=200.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHH--HHhhcC-CCCCC-CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIV--HSVRSA-RFNCY-SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      ...+|+|+.|.|+. ..++.++.+.+++.  +.+... ....| ++..|.++||+++++++      ++++++|++|+|+
T Consensus        24 ~~~~i~l~~g~p~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~   96 (423)
T 3ez1_A           24 RGLNLNMQRGQPAD-ADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNS   96 (423)
T ss_dssp             HTCCEESCCCCCCH-HHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCCh-HhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCc
Confidence            46789999999762 01356667888775  444322 24689 88889999999999998      4678899999999


Q ss_pred             HHHHH--HHHHHhcC--C---------CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh--ccCc
Q 020968          120 TQAIE--VILTVLAR--P---------GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENT  184 (319)
Q Consensus       120 t~ai~--~~~~~l~~--~---------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~  184 (319)
                      +++++  ++++++++  +         ||+|+++.|+|..+...++..|.+++.++.+.+   ++|++.+++++  .+++
T Consensus        97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~  173 (423)
T 3ez1_A           97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV  173 (423)
T ss_dssp             HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence            99998  88888877  7         599999999999999999999999999998653   49999999999  4677


Q ss_pred             eEEEEc-CCCCccccccCHHHHHHHHHHH-HHcCCEEEEeCCCCCccCCC---CCCCCCccc----CCCCCeEEEecCcc
Q 020968          185 VALVII-NPGNPCGNVYTYQHLQKIAETA-KKLGIMVIADEVYDHLAFGN---TPFVPMGVF----GSIVPVLTLGSISK  255 (319)
Q Consensus       185 ~~v~l~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~D~a~~~~~~~~---~~~~~~~~~----~~~~~vi~~~s~sK  255 (319)
                      ++|++. +|+||||.+++.+++++|+++| +++|+++|+||+|..+.+.+   ..+.++..+    +..+++++++|+||
T Consensus       174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  253 (423)
T 3ez1_A          174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK  253 (423)
T ss_dssp             EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred             eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence            888654 8899999999999999999999 99999999999999765544   222233332    34578999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      . +++|+|+||+++++        +++++++.... ...+++++.|.+++.++..
T Consensus       254 ~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  299 (423)
T 3ez1_A          254 I-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTE  299 (423)
T ss_dssp             T-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred             h-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence            9 79999999999863        58888887765 3567889999988884443

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=2.7e-32  Score=248.99  Aligned_cols=240  Identities=18%  Similarity=0.286  Sum_probs=197.5

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .|+|+.|++.    +++++.+.+++.+.+...  ....|++..+ .++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus        32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~  106 (369)
T 3cq5_A           32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ  106 (369)
T ss_dssp             SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence            4899999875    578899999999887642  2457876555 89999999999888787888899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~  203 (319)
                      .++++++++||+|+++.|+|..+...++..|.+++.++.+  +++.+|++++++.+++ ++++|++++|+||||.+++.+
T Consensus       107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~  184 (369)
T 3cq5_A          107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD  184 (369)
T ss_dssp             HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999999999999999864  4568999999999877 789999999999999999966


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC-CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV-PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~-~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      ++.++++.|   ++++|+||+|..+.++   ...+......+ ++++++|+||.++++|+|+||+++++        +++
T Consensus       185 ~l~~l~~~~---~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~  250 (369)
T 3cq5_A          185 DVERIINVA---PGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI  250 (369)
T ss_dssp             HHHHHHHHC---SSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred             HHHHHHHhC---CCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence            666666554   5999999999988753   11222223345 78999999999998999999999864        477


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ++++..... .+++++.|.++..++.
T Consensus       251 ~~l~~~~~~-~~~~~~~~~a~~~~l~  275 (369)
T 3cq5_A          251 DAVMLVRLP-YHLSALSQAAAIVALR  275 (369)
T ss_dssp             HHHHTTSCT-TCSCHHHHHHHHHHHH
T ss_pred             HHHHHcCCC-CCCCHHHHHHHHHHhc
Confidence            777765543 3578899988877554

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=2.9e-32  Score=249.03  Aligned_cols=221  Identities=20%  Similarity=0.352  Sum_probs=187.1

Q ss_pred             HHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH
Q 020968           70 AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA  149 (319)
Q Consensus        70 a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~  149 (319)
                      ++.+.+.... ..|++..|..+||+++++++.     .++++++++|+|+++|+..++++++++||+|+++.|+|..+..
T Consensus        47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~  120 (375)
T 3op7_A           47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD  120 (375)
T ss_dssp             HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred             HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence            3444444443 479888899999999999873     3577899999999999999999999999999999999999999


Q ss_pred             HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968          150 RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA  229 (319)
Q Consensus       150 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~  229 (319)
                      .++..|.+++.++.+.+++|.+|++++++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.
T Consensus       121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~  200 (375)
T 3op7_A          121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS  200 (375)
T ss_dssp             HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred             HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence            99999999999998776778899999999999889999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          230 FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       230 ~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      ++  +...+..  ..+++++++|+||.++++|+|+||++++        ++++++++..... ..+++++.|.++..++.
T Consensus       201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  268 (375)
T 3op7_A          201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAAN--------HQVTDILRDYRDYTMICAGVFDDLVAQLALA  268 (375)
T ss_dssp             SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECC--------HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred             cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeC--------HHHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence            65  2222222  2456899999999999999999999983        3688888776653 45567888877776543

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=3.6e-32  Score=246.28  Aligned_cols=235  Identities=15%  Similarity=0.184  Sum_probs=192.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|++.    +++++.+.+++.+.+.  ....|++..+ .++|+++++++      ++++++|++|+|+++++
T Consensus        14 g~~~id~~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~al   80 (350)
T 3fkd_A           14 SSEIVNFSTTVWT----DGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAAF   80 (350)
T ss_dssp             --CCEECSCCSCC----CSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHHH
T ss_pred             cccEEEccCCCCC----CCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            5789999999866    6789999999998873  2457887666 89999999998      45788999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEec-cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL-LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      .++++++.  ||+|+++.|+|..+...++..|.+++.++. ++.++  +++        +++++|++++|+||||.+++.
T Consensus        81 ~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~  148 (350)
T 3fkd_A           81 YQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQR  148 (350)
T ss_dssp             HHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCH
Confidence            99999987  999999999999999999999999999998 44333  332        468899999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++.+|+++|+++  ++|+|++|.++.+++...  ...+...+++++++|+||.++++|+|+||++++        ++++
T Consensus       149 ~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~--------~~~~  216 (350)
T 3fkd_A          149 TEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN--------KDFM  216 (350)
T ss_dssp             HHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC--------HHHH
T ss_pred             HHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeC--------HHHH
Confidence            9999999988765  999999999988765432  244555678999999999999999999999983        3588


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHhcccccccc
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKS  316 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~  316 (319)
                      ++++..... ..++.+.|.++..++...+.|.++
T Consensus       217 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~  249 (350)
T 3fkd_A          217 KRVAAFSTP-WAVNALAIEAAKFILIHPAQFTLP  249 (350)
T ss_dssp             HHHHTTCCT-TCSCHHHHHHHHHHHHCTTTTCCC
T ss_pred             HHHHHhCCC-CCCCHHHHHHHHHHHhCHHHHHHH
Confidence            888776653 467889999988866544435543

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=7.5e-33  Score=264.46  Aligned_cols=215  Identities=23%  Similarity=0.356  Sum_probs=182.4

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC-CCcCCHHHHHHHHHHHhhh-CC-CCCC-CCcEEEeCCHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-STVGILPARRAIADYLNRD-LP-YKLS-PDDVYLTLGCTQ  121 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~-~g-~~~~-~~~i~~~~G~t~  121 (319)
                      ++++|+.|.++    ++ ++.+++++.+.+...   .|+ +..|.+++|+++++++.+. .+ ..+. +++|++|+|+++
T Consensus       104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~  175 (533)
T 3f6t_A          104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA  175 (533)
T ss_dssp             HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred             hheeccCCCCC----cC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence            47899999987    34 566767666666542   454 7789999999999999665 33 4444 469999999999


Q ss_pred             HHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC--CCCCcCCHHHHHhhhccCceEEEEcCCCC
Q 020968          122 AIEVILTV-----LARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP--AKGWEVDLDAVEALADENTVALVIINPGN  194 (319)
Q Consensus       122 ai~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~n  194 (319)
                      ++..++.+     ++++||+|+++.|+|.++...++..|.+++.++++.  ++++.+|++++++++++++++|++++|+|
T Consensus       176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N  255 (533)
T 3f6t_A          176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN  255 (533)
T ss_dssp             HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred             HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence            99999998     789999999999999999998999999999998865  56789999999999988899999999999


Q ss_pred             ccccccCHHHHHHHHHHHH-HcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          195 PCGNVYTYQHLQKIAETAK-KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~-~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      |||.+++.+++++|+++|+ ++|+++|+||+|+++.++.   .++.... .+++++++||||.|+++|+|+||++++++
T Consensus       256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~  330 (533)
T 3f6t_A          256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF---KSIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEK  330 (533)
T ss_dssp             TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC---CCHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred             CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc---cCHhhcC-CCCEEEEecCcccCCCcccceEEEEECcH
Confidence            9999999999999999999 5899999999999988643   2333332 36899999999999999999999999875

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.2e-31  Score=239.51  Aligned_cols=229  Identities=19%  Similarity=0.227  Sum_probs=186.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ...++|+|+.+++.    +++++.+.+++.+....  ...|+ ..+..++|+++++++      ++++++|++|+|++++
T Consensus        14 ~~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~   80 (337)
T 3p1t_A           14 AAAQAVCLAFNENP----EAVEPRVQAAIAAAAAR--INRYP-FDAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC   80 (337)
T ss_dssp             CCCCCEECSSCCCC----SCCCHHHHHHHHHHGGG--TTSCC-TTHHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCceEeeCCCCC----CCCCHHHHHHHHHhhhh--hccCC-CCchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence            45689999999754    67899999999988764  45785 568899999999999      4577899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +.+++..+  +||+|+++.|+|..+...++..|.+++.++.+  .++.+|++++++.  .+++++++++|+||||.+++.
T Consensus        81 l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~  154 (337)
T 3p1t_A           81 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA  154 (337)
T ss_dssp             HHHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCH
Confidence            99999988  89999999999999999999999999999875  3578999999886  457899999999999999996


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++.++   |+++++ +|+||+|+++.+.+..  .   ....+++++++|+||.|+++|+|+||+++++        +++
T Consensus       155 ~~l~~l---~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~  217 (337)
T 3p1t_A          155 GELDQL---RQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------ELI  217 (337)
T ss_dssp             HHHHHH---HHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HHH
T ss_pred             HHHHHH---HHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HHH
Confidence            665554   556676 5669999987654321  1   2234678999999999999999999999853        577


Q ss_pred             HHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          283 DSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       283 ~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ++++.... ...++.+.|.++..++.
T Consensus       218 ~~l~~~~~-~~~~~~~~~~a~~~~l~  242 (337)
T 3p1t_A          218 AAMKRKQW-FCNVGTLDLHALEAALD  242 (337)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHHHHHHT
T ss_pred             HHHHhhcC-CCCCCHHHHHHHHHHhC
Confidence            77766543 34678888888887543

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.98  E-value=4.3e-31  Score=240.20  Aligned_cols=234  Identities=17%  Similarity=0.313  Sum_probs=188.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .+.++|+|+.|+++    +++++.+.+++.+.+...  ....|+.. +..++|+++++++      ++++++|++|+|++
T Consensus        24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~   92 (360)
T 3hdo_A           24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSD   92 (360)
T ss_dssp             CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred             cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence            35679999999976    688999999999988764  13467654 6799999999999      35788999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  200 (319)
                      +|++.++++++++||+|+++.|+|..+...++..|.+++.++.+.  ++.+  +++++..  +++++++++|+||||.++
T Consensus        93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~  166 (360)
T 3hdo_A           93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF  166 (360)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence            999999999999999999999999999999999999999998853  3344  4443332  356999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                      +.+   ++.++|+++|+++|+|++|.++.  +...  .......+++++++|+||.|+++|+|+||++++        ++
T Consensus       167 ~~~---~l~~l~~~~~~~li~De~~~~~~--~~~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~  231 (360)
T 3hdo_A          167 PLE---YIDELARRCAGMLVLDETYAEFA--ESNA--LELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR--------PE  231 (360)
T ss_dssp             CHH---HHHHHHHHBSSEEEEECTTGGGS--SCCC--THHHHHCSSEEEEEESTTTTSCTTSCCEEEECC--------HH
T ss_pred             CHH---HHHHHHHHCCCEEEEECChHhhC--Ccch--hHHhccCCCEEEEecchHhhcCCccceeeEeeC--------HH
Confidence            954   56666778899999999999864  2222  222233467899999999999999999999984        35


Q ss_pred             HHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          281 IVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      ++++++..... .+++++.|.++..++..
T Consensus       232 ~~~~~~~~~~~-~~~~~~~~~a~~~~l~~  259 (360)
T 3hdo_A          232 VIAALDKIRDH-YNLDRLAQAACVAALRD  259 (360)
T ss_dssp             HHHHHHHHSCS-CCSCHHHHHHHHHHHHC
T ss_pred             HHHHHHHhCCC-CCCCHHHHHHHHHHhcC
Confidence            88888776654 46788999988885543

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.98  E-value=2.5e-31  Score=239.54  Aligned_cols=229  Identities=20%  Similarity=0.276  Sum_probs=186.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      +++|+|+.|.++    +++++.+.+++.+.+.......|+. .+..++|+++++++.+.   .+++++|++|+|++++++
T Consensus        19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~   90 (335)
T 1uu1_A           19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY   90 (335)
T ss_dssp             CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred             CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence            468999999865    5778999999998874333457865 47899999999999542   357789999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      .+++++   ||+|+++ |+|..+...++..|.+++.++.+  +++.+|++++     +++++|++++|+||||.+++.++
T Consensus        91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~  159 (335)
T 1uu1_A           91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE  159 (335)
T ss_dssp             HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred             HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence            999998   8999999 99999999999999999988874  3467887766     46889999999999999999998


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968          205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS  284 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  284 (319)
                      +++++++|   | ++|+||+|.++.++  .  .+..+...+++++++|+||.|+++|+|+||++++        ++++++
T Consensus       160 l~~l~~~~---~-~li~De~~~~~~~~--~--~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~~  223 (335)
T 1uu1_A          160 IERILKTG---A-FVALDEAYYEFHGE--S--YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFIDA  223 (335)
T ss_dssp             HHHHHHTT---C-EEEEECTTHHHHCC--C--CGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC--------HHHHHH
T ss_pred             HHHHHHhC---C-EEEEECcchhhcch--h--HHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC--------HHHHHH
Confidence            88888877   7 89999999987642  1  1222344567899999999999999999999984        257777


Q ss_pred             HHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          285 IKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       285 ~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      ++..... .+++++.|.++..++..
T Consensus       224 l~~~~~~-~~~~~~~~~~~~~~l~~  247 (335)
T 1uu1_A          224 YNRVRLP-FNVSYVSQMFAKVALDH  247 (335)
T ss_dssp             HHHHSCT-TCSCHHHHHHHHHHHHT
T ss_pred             HHHhcCC-CCcCHHHHHHHHHHhCC
Confidence            7766543 36788999998885543

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.97  E-value=2.7e-32  Score=251.23  Aligned_cols=232  Identities=17%  Similarity=0.186  Sum_probs=179.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHh--hc-CCCCCCCCCcCC-----HHHHHHHHHHHhhhCCCCCCC-CcE
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSV--RS-ARFNCYSSTVGI-----LPARRAIADYLNRDLPYKLSP-DDV  113 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~--~~-~~~~~Y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~-~~i  113 (319)
                      .++++|+|+.|+|+    ++.++.+.+++.+..  .. .....|++..|.     ++||+++++++. .+|..+++ ++|
T Consensus        20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i   94 (391)
T 3bwn_A           20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI   94 (391)
T ss_dssp             TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence            46789999999987    555666666553322  11 134579998898     999999999998 46777777 599


Q ss_pred             EEeCCHHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEE
Q 020968          114 YLTLGCTQAIEVILTVLARPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI  189 (319)
Q Consensus       114 ~~~~G~t~ai~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l  189 (319)
                      ++|+|+++++.+++++++++||    +|+++.|+|..|...++..|.+++.++.+.+ +  ++        .++++++++
T Consensus        95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l  163 (391)
T 3bwn_A           95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV  163 (391)
T ss_dssp             EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred             EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence            9999999999999999999999    9999999999999999999999988887532 2  22        246789999


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      ++||||||.+++     +|++.++.++++||+|++|..    + ...++..  ..+++|+++||||.|+++|+|+||+++
T Consensus       164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~  231 (391)
T 3bwn_A          164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV  231 (391)
T ss_dssp             ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred             CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence            999999999986     344422233499999999974    2 1223332  346799999999999999999999997


Q ss_pred             eCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968          270 SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~  309 (319)
                      ++       +++++++...+. ...+++.+.|.+++.++..
T Consensus       232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~  265 (391)
T 3bwn_A          232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNV  265 (391)
T ss_dssp             CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhC
Confidence            33       258888887765 3467899999998886644

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.97  E-value=7.1e-31  Score=244.37  Aligned_cols=230  Identities=15%  Similarity=0.156  Sum_probs=186.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCc-C---CHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTV-G---ILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~-g---~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ...+|+|+.|+|+    +++++.+.+++.+.+.....  ..|++.. |   .++||+++++++.+..+..+++++|++|+
T Consensus        55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~  130 (427)
T 2hox_A           55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (427)
T ss_dssp             TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence            4468999999986    56778888888877632222  2498877 8   89999999999988777678899999999


Q ss_pred             CHHHHHHHHHHHh--------cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEE
Q 020968          118 GCTQAIEVILTVL--------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI  189 (319)
Q Consensus       118 G~t~ai~~~~~~l--------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l  189 (319)
                      |+++++.+++.++        +++||+|+++.|+|..|...++..|.+++.+        .+|++.++++++++++++++
T Consensus       131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~l  202 (427)
T 2hox_A          131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEMV  202 (427)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEEE
T ss_pred             CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEEEE
Confidence            9999999999999        8999999999999999999999999887643        45788888888778899999


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      ++||||||.+++ +.       ++  ++..++|++|.+      +..++..+. .+++|+++||||.|+++|+|+||+++
T Consensus       203 ~~p~NPtG~~~~-~~-------l~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~  265 (427)
T 2hox_A          203 TSPNNPEGLLRH-AV-------IK--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI  265 (427)
T ss_dssp             ESSCTTTCCCCC-CS-------ST--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred             cCCCCCcccccH-HH-------Hc--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence            999999999999 42       22  567788887753      122333333 56789999999999999999999998


Q ss_pred             eCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968          270 SDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~  309 (319)
                      ++       ++++++++..... ..+++.+.|.+++.++..
T Consensus       266 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~  299 (427)
T 2hox_A          266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKE  299 (427)
T ss_dssp             CC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             CC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhc
Confidence            64       3588888887764 467899999998875543

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.96  E-value=3.6e-28  Score=223.70  Aligned_cols=233  Identities=15%  Similarity=0.127  Sum_probs=182.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +.++++|+.|++.   .+++++.+.+++.+.+....  ...|.+..|..++++++++++.+.+|    .+++++|+|+++
T Consensus        42 g~~~idl~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt~  114 (398)
T 3a2b_A           42 GRRVLMFGSNSYL---GLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGFQ  114 (398)
T ss_dssp             TEEEEECSCSCTT---CGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred             CceEEEeeccccc---CCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHHH
Confidence            4568999999861   25578999999998876432  22455566778888888888887665    358999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCCCccc
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPCG  197 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG  197 (319)
                      |+..++++++++||.|+++.|+|..+...++..|.+++.++.       +|++++++.+++    ++++|++++|+||||
T Consensus       115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG  187 (398)
T 3a2b_A          115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG  187 (398)
T ss_dssp             HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred             HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence            999999999999999999999999999999999999998875       589999998876    688999999999999


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEecCccccCCCcceeeEEEeeCCCCCc
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGIL  276 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~  276 (319)
                      .+++   +++|.++|+++|+++|+||+|+.+.++.........+...++ +++++|+||+++.+|   ||++++.     
T Consensus       188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~-----  256 (398)
T 3a2b_A          188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA-----  256 (398)
T ss_dssp             CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH-----
T ss_pred             CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH-----
Confidence            9987   899999999999999999999987764322111111222234 599999999998778   9999853     


Q ss_pred             cchHHHHHHHHh-hh-hcCCcchHHHHHHH
Q 020968          277 QDSGIVDSIKSF-LN-ISSDPATFIQFLKS  304 (319)
Q Consensus       277 ~~~~~~~~~~~~-~~-~~~~~~~~~q~~~~  304 (319)
                         +++++++.. .. ...+.+.+.|.+++
T Consensus       257 ---~~~~~l~~~~~~~~~~~~~~~~~~a~~  283 (398)
T 3a2b_A          257 ---DVIDFLKHNARSVMFSASMTPASVAST  283 (398)
T ss_dssp             ---HHHHHHHHHCHHHHSSBCCCHHHHHHH
T ss_pred             ---HHHHHHHHhcccceecCCCCHHHHHHH
Confidence               577777764 22 23445667776543

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.95  E-value=2.5e-27  Score=218.94  Aligned_cols=223  Identities=15%  Similarity=0.105  Sum_probs=175.2

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhh----cCCCCCCCCCcCCH---HHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVR----SARFNCYSSTVGIL---PARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~Y~~~~g~~---~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      +..+++.++|+    ++.++.+.+++.+.++    ......|+. .+.+   ++|++++++++        .+++++++|
T Consensus        19 ~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g--------~~~~i~~~~   85 (404)
T 1e5e_A           19 KDQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK--------TEACVATSS   85 (404)
T ss_dssp             CCTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT--------CSEEEEESS
T ss_pred             CCCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC--------CCcEEEeCC
Confidence            34578888887    4555555555444432    222346776 4555   89999999982        247888888


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGN  194 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~n  194 (319)
                      +++|+..++.+++++||+|+++.|.|..+..    .++..|.+++.++.+       |++++++.+++++++|++++|+|
T Consensus        86 g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~N  158 (404)
T 1e5e_A           86 GMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPAN  158 (404)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCT
T ss_pred             hHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCC
Confidence            8999999999999999999999999998877    678899999988863       78899999988899999999999


Q ss_pred             ccccccCHHHHHHHHHHHHH-cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee-eEEEeeCC
Q 020968          195 PCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDP  272 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~-~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~  272 (319)
                      |||.+++   +++|+++|++ +|+++|+|++|..+.+..    ++ .   .++++++.|+||+|+++|+|+ ||+++++ 
T Consensus       159 ptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~----~~-~---~~~di~~~S~sK~~~~~g~ri~G~~~~~~-  226 (404)
T 1e5e_A          159 PTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN----PV-D---FGVDVVVHSATKYINGHTDVVAGLICGKA-  226 (404)
T ss_dssp             TTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC----GG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECH-
T ss_pred             CCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC----cc-c---cCCEEEEEcCccccCCCCCCeEEEEEECH-
Confidence            9999986   8999999999 999999999999876531    22 1   246799999999999999998 9999864 


Q ss_pred             CCCccchHHHH-HHHHhhhh--cCCcchHHHHHHHHHH
Q 020968          273 NGILQDSGIVD-SIKSFLNI--SSDPATFIQFLKSSRK  307 (319)
Q Consensus       273 ~~~~~~~~~~~-~~~~~~~~--~~~~~~~~q~~~~~~l  307 (319)
                             ++++ +++.....  ....+++.|.++...+
T Consensus       227 -------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l  257 (404)
T 1e5e_A          227 -------DLLQQIRMVGIKDITGSVISPHDAWLITRGL  257 (404)
T ss_dssp             -------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhH
Confidence                   4555 67665543  3456788887766544

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.95  E-value=5.1e-27  Score=213.63  Aligned_cols=203  Identities=15%  Similarity=0.154  Sum_probs=161.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--------CCCCCCCcCCHHHHHH-HHHHHhhhCCCCCCCCcEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSSTVGILPARRA-IADYLNRDLPYKLSPDDVY  114 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~~~~~~g~~~~~~~i~  114 (319)
                      ++++++|+.|.+.    .++++.+.+++.+.+....        ...|.+..+..++|++ +++++.      .+  +++
T Consensus         6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~   73 (371)
T 2e7j_A            6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR   73 (371)
T ss_dssp             --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred             CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence            5678999987644    4678999999998775431        1234566788999999 999983      23  999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEe--ccCCCCCcCCHHHHHhhhc-----cCceEE
Q 020968          115 LTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFD--LLPAKGWEVDLDAVEALAD-----ENTVAL  187 (319)
Q Consensus       115 ~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~-----~~~~~v  187 (319)
                      +|+|+++|+..++++++++||+|+++.|+|..+...++..|++++.++  .+  .++.+|++++++.++     ++++++
T Consensus        74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v  151 (371)
T 2e7j_A           74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLA  151 (371)
T ss_dssp             EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEE
T ss_pred             EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEE
Confidence            999999999999999999999999999999999888999999999998  54  347899999999987     678999


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      ++++|+||||.+++   +++|.++|+++|+++|+|++|+.+...    .++..+.   ..++++|+||+++.++ |+||+
T Consensus       152 ~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~~-~~G~~  220 (371)
T 2e7j_A          152 LITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIG---ADFIVGSGHKSMAASG-PIGVM  220 (371)
T ss_dssp             EEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHT---CSEEEEEHHHHSSCCS-SCEEE
T ss_pred             EEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcC---CCEEEecCCcCCCCCC-CcEEE
Confidence            99999999999988   689999999999999999999985431    1222222   3499999999976654 99999


Q ss_pred             EeeC
Q 020968          268 VTSD  271 (319)
Q Consensus       268 ~~~~  271 (319)
                      ++++
T Consensus       221 ~~~~  224 (371)
T 2e7j_A          221 GMKE  224 (371)
T ss_dssp             EECT
T ss_pred             EEec
Confidence            9875

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.95  E-value=1.6e-26  Score=213.72  Aligned_cols=212  Identities=19%  Similarity=0.293  Sum_probs=170.5

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC------CCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR------FNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      .++++|+.|.++     +.++.+.+++.+.+....      ...|++  ..+..++|+++++++..    . +++++++|
T Consensus        27 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~----~-~~~~v~~~   96 (420)
T 1t3i_A           27 HPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINA----R-SPREIVYT   96 (420)
T ss_dssp             EECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTC----S-CGGGEEEE
T ss_pred             CceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCC----C-CCCeEEEc
Confidence            458999999975     567899999998876521      223543  35678999999999832    1 56899999


Q ss_pred             CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968          117 LGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       117 ~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      +|+++|+..++.++    .++||+|+++.|+|..    +...++..|.+++.++.+  .++.+|++++++++++++++|+
T Consensus        97 ~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~  174 (420)
T 1t3i_A           97 RNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLVT  174 (420)
T ss_dssp             SSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEEE
T ss_pred             CChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEEE
Confidence            99999999999999    8999999999999988    566777889999998875  4567999999999988899999


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +++|+||||.+++   +++|.++|+++|+++|+|++|+....    +..+..+   +.++++.|+||.++.+|  +||++
T Consensus       175 ~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~---~~di~~~s~sK~~~~~g--~G~~~  242 (420)
T 1t3i_A          175 VVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLI---DCDWLVASGHKMCAPTG--IGFLY  242 (420)
T ss_dssp             EESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEEEE
T ss_pred             EeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhc---CCCEEEEehhhhcCCCc--eEEEE
Confidence            9999999999988   89999999999999999999986432    1122222   34689999999988777  99999


Q ss_pred             eeCCCCCccchHHHHHHHHh
Q 020968          269 TSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~  288 (319)
                      +++        +++++++..
T Consensus       243 ~~~--------~~~~~~~~~  254 (420)
T 1t3i_A          243 GKE--------EILEAMPPF  254 (420)
T ss_dssp             ECH--------HHHHHSCCC
T ss_pred             Ech--------HHHhhcCce
Confidence            853        466666543

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.94  E-value=2.8e-25  Score=203.03  Aligned_cols=218  Identities=14%  Similarity=0.104  Sum_probs=169.9

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR  141 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~  141 (319)
                      +.++.+.+++.+.+.    ..|++.  ..++++++++++.+.+|.. +++++++|+|+++|+..++.+++++||+|+++.
T Consensus        30 ~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~  102 (386)
T 2dr1_A           30 ACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI  102 (386)
T ss_dssp             CCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence            567888887766543    246542  3677888888887766654 467899999999999999999999999999999


Q ss_pred             CCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh--ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968          142 PGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI  217 (319)
Q Consensus       142 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~  217 (319)
                      |+|.+  +...++..|++++.++.+.  ++.+|++++++++  .+++++|++++|+||||.+.+   +++|.++|+++|+
T Consensus       103 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  177 (386)
T 2dr1_A          103 IGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDK  177 (386)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred             CCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCC
Confidence            99988  8888899999999998754  4679999999998  457899999999999999976   8999999999999


Q ss_pred             EEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH-----------
Q 020968          218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK-----------  286 (319)
Q Consensus       218 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~-----------  286 (319)
                      ++|+|++|+.+.+.    .++   ...+.++++.|+||+++.++ ++||+++++        +++++++           
T Consensus       178 ~li~D~a~~~~~~~----~~~---~~~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~~  241 (386)
T 2dr1_A          178 LVFVDAVSAMGGAD----IKF---DKWGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFDI  241 (386)
T ss_dssp             EEEEECTTTBTTBC----CCT---TTTTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTCH
T ss_pred             eEEEEccccccCcc----ccc---cccCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEeH
Confidence            99999999975431    122   22245799999999988763 399999854        4555552           


Q ss_pred             -----Hhh---hhcCCcchHHHHHHHHHH
Q 020968          287 -----SFL---NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       287 -----~~~---~~~~~~~~~~q~~~~~~l  307 (319)
                           ...   ....+++.+.|.++..++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  270 (386)
T 2dr1_A          242 PLYVKYLKEKESTPSTPPMPQVFGINVAL  270 (386)
T ss_dssp             HHHHHHHHHHSSCSSCCCHHHHHHHHHHH
T ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHHH
Confidence                 221   223456788888777654

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.94  E-value=3.9e-26  Score=208.46  Aligned_cols=229  Identities=17%  Similarity=0.143  Sum_probs=172.2

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +.|+.+...     ++++.+.+++.+.+......       .|....+..++|+++++++      +++++++++|+|++
T Consensus         3 ~yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t   71 (384)
T 1eg5_A            3 VYFDNNATT-----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT   71 (384)
T ss_dssp             EECBTTTCC-----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred             EEEecCccC-----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence            567776643     67899999999987642100       1222345688999999998      35678999999999


Q ss_pred             HHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968          121 QAIEVILTVLA----RPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG  193 (319)
Q Consensus       121 ~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  193 (319)
                      +|+..+++++.    ++||+|+++.|+|+.+...+   +..|.+++.++.+.  ++.+|++++++.+++++++|++++|+
T Consensus        72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~  149 (384)
T 1eg5_A           72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN  149 (384)
T ss_dssp             HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred             HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence            99999999997    79999999999998876555   67899999888753  46799999999998889999999999


Q ss_pred             CccccccCHHHHHHHHHHHHHcC--CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLG--IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~--~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ||||.+++   +++|.++|+++|  +++|+|++|+.   +. .+..+..   .+..+++.|+||+++.+|  +||+++++
T Consensus       150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~-~~~~~~~---~~~di~~~s~sK~~g~~G--~G~~~~~~  217 (384)
T 1eg5_A          150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GK-IPFSLEK---LEVDYASFSAHKFHGPKG--VGITYIRK  217 (384)
T ss_dssp             TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TT-SCCCCTT---TCCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred             CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CC-cccCchh---cCCCEEEecHHHhcCCCc--eEEEEEcC
Confidence            99999988   788999999999  99999999972   22 1222222   235699999999988888  79999875


Q ss_pred             CCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          272 PNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      +- .     +...+...    ......++.+.|.++..++
T Consensus       218 ~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al  251 (384)
T 1eg5_A          218 GV-P-----IRPLIHGGGQERGLRSGTQNVPGIVGAARAM  251 (384)
T ss_dssp             TS-C-----CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHH
T ss_pred             CC-c-----cccccccCcccccccCCCCChHHHHHHHHHH
Confidence            31 0     01111110    1123456788887766644

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.94  E-value=1.1e-25  Score=206.48  Aligned_cols=217  Identities=13%  Similarity=0.126  Sum_probs=171.6

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLP  140 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~  140 (319)
                      ++++.+.+++.+.+..    .|++.  ..++++++++++.+.+|.  +++ ++++|+|+++|+..++.+++++||+|+++
T Consensus        44 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~  115 (393)
T 1vjo_A           44 NAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG  115 (393)
T ss_dssp             CCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence            6778898888765532    46542  457777777777776664  566 89999999999999999999999999999


Q ss_pred             CCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968          141 RPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI  217 (319)
Q Consensus       141 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~  217 (319)
                      .|+|..  +...++..|.+++.++.+.  ++.+|++++++.+++ ++++|++++|+||||.+++   +++|.++|+++|+
T Consensus       116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  190 (393)
T 1vjo_A          116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGT  190 (393)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred             cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCC
Confidence            999998  8888999999999998854  467999999999987 8899999999999999977   8899999999999


Q ss_pred             EEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh---------
Q 020968          218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF---------  288 (319)
Q Consensus       218 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~---------  288 (319)
                      ++|+|++|..   +. .+..   +...++.++++|+||+++.+| |+||+++++        +++++++..         
T Consensus       191 ~li~Dea~~~---g~-~~~~---~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~~  254 (393)
T 1vjo_A          191 LLLVDTVTSL---GG-VPIF---LDAWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWYL  254 (393)
T ss_dssp             EEEEECTTTT---TT-SCCC---TTTTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCSTT
T ss_pred             EEEEECCccc---cC-cCCc---ccccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCceec
Confidence            9999999992   22 2222   223345699999999988888 999999854        466666432         


Q ss_pred             ----------h-hhcC-CcchHHHHHHHHHH
Q 020968          289 ----------L-NISS-DPATFIQFLKSSRK  307 (319)
Q Consensus       289 ----------~-~~~~-~~~~~~q~~~~~~l  307 (319)
                                . .... +++.+.|.++..++
T Consensus       255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al  285 (393)
T 1vjo_A          255 DMNLLGKYWGSERVYHHTAPINLYYALREAL  285 (393)
T ss_dssp             CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHH
T ss_pred             CcHhhhhhhccCCCCCCCCCHHHHHHHHHHH
Confidence                      0 1122 56788888777654

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.94  E-value=4.2e-25  Score=202.20  Aligned_cols=231  Identities=14%  Similarity=0.104  Sum_probs=172.1

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc-CC---CCCC--CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-AR---FNCY--SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..+++|+.|++   ..+++++.+.+++.+.+.. ..   ...|  +...+..++|+++++++      +++  +.++++
T Consensus        38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~--~~i~~~  106 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL------GYS--RALLFI  106 (384)
T ss_dssp             TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH------TCS--EEEEES
T ss_pred             CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh------CCC--cEEEeC
Confidence            456899999874   1246789999999988765 21   1223  44467789999999998      232  455555


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccC---ceEEEEcCCCC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN---TVALVIINPGN  194 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~v~l~~p~n  194 (319)
                      ++++++..+++++.++||.|+++.|+|..+...++..|.+++.++.       .|++++++.+++.   ++++++++|+|
T Consensus       107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n  179 (384)
T 1bs0_A          107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  179 (384)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            5589999999999999999999999999999999999999988873       4889999888653   67888899999


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG  274 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~  274 (319)
                      |||.+++   +++|.++|+++|+++|+|++|+.+.++.........+.. ...++++|+||+++.+|   ||+++++   
T Consensus       180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~---  249 (384)
T 1bs0_A          180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSS---  249 (384)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECH---
T ss_pred             CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCH---
Confidence            9999988   789999999999999999999876543111111122222 23499999999998777   9999853   


Q ss_pred             CccchHHHHHHHHhh-hh--cCCcchHHHHHHHHHH
Q 020968          275 ILQDSGIVDSIKSFL-NI--SSDPATFIQFLKSSRK  307 (319)
Q Consensus       275 ~~~~~~~~~~~~~~~-~~--~~~~~~~~q~~~~~~l  307 (319)
                           +++++++... ..  ...++++.|.++..++
T Consensus       250 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al  280 (384)
T 1bs0_A          250 -----TVADYLLQFARHLIYSTSMPPAQAQALRASL  280 (384)
T ss_dssp             -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHH
T ss_pred             -----HHHHHHHHhchhhhcCCCCCHHHHHHHHHHH
Confidence                 5777776643 22  2246777776655433

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.94  E-value=6.9e-26  Score=208.35  Aligned_cols=212  Identities=20%  Similarity=0.250  Sum_probs=168.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      +.++++|+.+.++     +.++.+.+++.+.+....  ...      |.+..+..++|+++++++..    . ++++|++
T Consensus        21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~-~~~~v~~   90 (406)
T 1kmj_A           21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINA----R-SAEELVF   90 (406)
T ss_dssp             TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTC----S-CGGGEEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCC----C-CCCeEEE
Confidence            3468999999875     467899999998876531  111      22345678899999998832    1 5689999


Q ss_pred             eCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          116 TLGCTQAIEVILTVL----ARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      |+|+++|+..+++++    +++||+|+++.|+|.+.    ...++..|.+++.++.+.  ++.+|++++++++++++++|
T Consensus        91 ~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~v  168 (406)
T 1kmj_A           91 VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRLL  168 (406)
T ss_dssp             ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEEE
T ss_pred             eCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeEE
Confidence            999999999999999    88999999999998653    345677899999988753  46789999999998889999


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      ++++|+||||.+++   +++|.++|+++|+++|+|++|.....    +..+..   .++++++.|+||.++.+|  +||+
T Consensus       169 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~---~~~d~~~~s~~K~~g~~G--~G~~  236 (406)
T 1kmj_A          169 AITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQA---LDCDFYVFSGHKLYGPTG--IGIL  236 (406)
T ss_dssp             EEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHH---HTCSEEEEEGGGTTSCTT--CEEE
T ss_pred             EEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCcccc---cCCCEEEEEchhccCCCC--cEEE
Confidence            99999999999988   89999999999999999999986321    112222   235699999999998888  8999


Q ss_pred             EeeCCCCCccchHHHHHHHH
Q 020968          268 VTSDPNGILQDSGIVDSIKS  287 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~  287 (319)
                      ++++        +++++++.
T Consensus       237 ~~~~--------~~~~~~~~  248 (406)
T 1kmj_A          237 YVKE--------ALLQEMPP  248 (406)
T ss_dssp             EECH--------HHHHHCCC
T ss_pred             EEeH--------HHHhhcCC
Confidence            9853        46666543

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.94  E-value=5.2e-26  Score=208.19  Aligned_cols=205  Identities=16%  Similarity=0.111  Sum_probs=163.8

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-CC-----CCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FN-----CYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~-----~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ++.++|+.+.+.     +.++.+.+++.+.+.... ..     .|+. ..+..++|+++++++      ++++++|++|+
T Consensus        15 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   83 (390)
T 1elu_A           15 ANKTYFNFGGQG-----ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD   83 (390)
T ss_dssp             TTSEECCTTTCC-----CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred             CCeEEecCCccC-----CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence            568999998743     567889999988776421 01     3433 256789999999998      35677999999


Q ss_pred             CHHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          118 GCTQAIEVILTVL-ARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       118 G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      |+++++..+++++ .++||+|+++.|+|..+...    ++..|.+++.++.+...++.+|++.+++.+++++++|++++|
T Consensus        84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~  163 (390)
T 1elu_A           84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL  163 (390)
T ss_dssp             SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred             ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence            9999999999999 79999999999999986543    567799999998864356789999999999888999999999


Q ss_pred             CCccccccCHHHHHHHHHHHH----HcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          193 GNPCGNVYTYQHLQKIAETAK----KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +||||.+++   +++|.++|+    ++|+++|+|++|....    .+..+   ......+++.|+||+ ..+|.++||++
T Consensus       164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~---~~~~~d~~~~s~~K~-~~~~~g~G~~~  232 (390)
T 1elu_A          164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDF---SRLEVDYYAFTGHKW-FAGPAGVGGLY  232 (390)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCT---TTSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred             ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCCh---hhcCCCEEEcccccc-ccCCCceEEEE
Confidence            999999988   888999999    9999999999998521    11122   222446999999995 45667799999


Q ss_pred             eeC
Q 020968          269 TSD  271 (319)
Q Consensus       269 ~~~  271 (319)
                      +++
T Consensus       233 ~~~  235 (390)
T 1elu_A          233 IHG  235 (390)
T ss_dssp             ECT
T ss_pred             ECH
Confidence            864

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.94  E-value=5.9e-25  Score=202.54  Aligned_cols=226  Identities=16%  Similarity=0.123  Sum_probs=165.5

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC--CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      ..++.++|+........+.+.+++...........|+  +.....++++.+++++.        .++.++++++++|+..
T Consensus        23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~a~~~   94 (398)
T 2rfv_A           23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER--------GEAGLATASGISAITT   94 (398)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHH
Confidence            3577888763222333344444444111111112333  34456788888888772        2266677777799999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccC
Q 020968          126 ILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       126 ~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  201 (319)
                      +++++.++||+|+++.|.|.++...+    +..|.+++.++.+       |++++++.+++++++|++++|+||||.+++
T Consensus        95 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~  167 (398)
T 2rfv_A           95 TLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD  167 (398)
T ss_dssp             HHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC
Confidence            99999999999999999999887665    7889999888762       899999999888999999999999999986


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchH
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSG  280 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~  280 (319)
                         +++|.++|+++|+++|+|++|..+.+..    ++ .+   +.++++.|+||+++++|+|+ ||+++++        +
T Consensus       168 ---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~--------~  228 (398)
T 2rfv_A          168 ---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ--------E  228 (398)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------H
T ss_pred             ---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH--------H
Confidence               8999999999999999999999766531    11 12   35699999999999999999 9999864        3


Q ss_pred             HHH-HHHHhhhh--cCCcchHHHHHHHHHH
Q 020968          281 IVD-SIKSFLNI--SSDPATFIQFLKSSRK  307 (319)
Q Consensus       281 ~~~-~~~~~~~~--~~~~~~~~q~~~~~~l  307 (319)
                      +++ .++.....  ....+++.|.++..++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  258 (398)
T 2rfv_A          229 FIDQARFVGLKDITGGCMSPFNAWLTLRGV  258 (398)
T ss_dssp             HHHHHHHTHHHHTTCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCHHHHHHHHhhh
Confidence            554 55544432  3466788888776654

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.93  E-value=6.9e-25  Score=201.43  Aligned_cols=230  Identities=13%  Similarity=0.098  Sum_probs=167.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC----CC--CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF----NC--YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~--Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .++|+|+.++|-   .+..++.+.+++.+.+.....    ..  |+...+..++|+.+++++.      . ++.+++ ++
T Consensus        43 ~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~i~~-~s  111 (399)
T 3tqx_A           43 KEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDTILY-SS  111 (399)
T ss_dssp             EEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEEEEE-SC
T ss_pred             eeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcEEEE-Cc
Confidence            458999999653   135688999999888765211    11  2233446889999998883      2 234444 55


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p  192 (319)
                      +++++..++.+++++||.|+++.|+|..+...++..|.+++.++.       .|++.+++.+++      ++++|++++|
T Consensus       112 Gt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~  184 (399)
T 3tqx_A          112 CFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGV  184 (399)
T ss_dssp             HHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESE
T ss_pred             hHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCC
Confidence            578999999999999999999999999999999999999988875       467788887765      7889999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||||.+++   +++|.++|+++|+++|+|++|+...++........... ..++.++++|+||+++  |++.||+++++
T Consensus       185 ~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~  259 (399)
T 3tqx_A          185 FSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHK  259 (399)
T ss_dssp             ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECH
T ss_pred             CCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCH
Confidence            999999988   89999999999999999999974333322211122222 1245699999999987  44559999853


Q ss_pred             CCCCccchHHHHHHHHhhh-h--cCCcchHHHHHHHH
Q 020968          272 PNGILQDSGIVDSIKSFLN-I--SSDPATFIQFLKSS  305 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~q~~~~~  305 (319)
                              ++++.+..... .  ....+++.+.++..
T Consensus       260 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (399)
T 3tqx_A          260 --------EIIEWLRNRSRPYLFSNTVAPVIVATSLK  288 (399)
T ss_dssp             --------HHHHHHHHHCHHHHSSCCCCHHHHHHHHH
T ss_pred             --------HHHHHHHHhCcceeccCCCcHHHHHHHHH
Confidence                    57777776532 1  22445555555444

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.93  E-value=8.1e-25  Score=203.23  Aligned_cols=213  Identities=17%  Similarity=0.172  Sum_probs=173.2

Q ss_pred             hcCCCCeE--eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           41 KNDTRPLI--PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        41 ~~~~~~~i--~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ..++..++  +|+.|+|+    +++|+.+.+++.+.+...   .|++ ..+..++|+++++++.        .+++++|+
T Consensus        10 ~~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~   74 (424)
T 2po3_A           10 FFGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATC   74 (424)
T ss_dssp             GGTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEES
T ss_pred             hhcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeC
Confidence            34455555  68899877    677899999999887653   4776 6788999999999993        35899999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccc
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG  197 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG  197 (319)
                      |+++|+.++++++. +||+|+++.|+|..+...+...|++++.++.++ +++.+|++++++.+++++++|++++   |||
T Consensus        75 ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG  149 (424)
T 2po3_A           75 NATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWG  149 (424)
T ss_dssp             CHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGG
T ss_pred             CHHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCC
Confidence            99999999999985 789999999999999999999999999999864 4678999999999988888888764   899


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCc
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL  276 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~  276 (319)
                      ..   .++++|.++|+++|+++|+|++|. ++.+++..   +..+.  +  +++.||||.++++|.|+||+++++     
T Consensus       150 ~~---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~~--d--i~~~S~sk~K~l~~~~~G~~v~~~-----  214 (424)
T 2po3_A          150 RP---CAADQLRKVADEHGLRLYFDAAHALGCAVDGRP---AGSLG--D--AEVFSFHATKAVNAFEGGAVVTDD-----  214 (424)
T ss_dssp             CC---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS--S--EEEEECCTTSSSCCSSCEEEEESC-----
T ss_pred             Cc---CCHHHHHHHHHHcCCEEEEECccccCCeECCee---ccccc--C--EEEEeCCCCCCccCCCCeEEEeCC-----
Confidence            87   459999999999999999999999 46665432   22221  2  899999977778889999999864     


Q ss_pred             cchHHHHHHHHhhh
Q 020968          277 QDSGIVDSIKSFLN  290 (319)
Q Consensus       277 ~~~~~~~~~~~~~~  290 (319)
                        ++++++++....
T Consensus       215 --~~l~~~l~~~~~  226 (424)
T 2po3_A          215 --ADLAARIRALHN  226 (424)
T ss_dssp             --HHHHHHHHHHHB
T ss_pred             --HHHHHHHHHHHh
Confidence              247777776543

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.93  E-value=9.7e-25  Score=202.19  Aligned_cols=206  Identities=17%  Similarity=0.165  Sum_probs=160.4

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC----------CcCCHHHHHHHHHHHhhhCCCCCCCC
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS----------TVGILPARRAIADYLNRDLPYKLSPD  111 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~----------~~g~~~lr~~ia~~~~~~~g~~~~~~  111 (319)
                      ..+++.+.|+.+.+.     ++++.+.+++.+.+.......++.          .....++++.+++++      +.+++
T Consensus        18 ~~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~   86 (423)
T 3lvm_A           18 RAMKLPIYLDYSATT-----PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPR   86 (423)
T ss_dssp             --CCSSEECBTTTCC-----CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGG
T ss_pred             cccCCCEeecCCCcC-----CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCCCC
Confidence            357889999988764     678999999988766111111111          123467788888877      34678


Q ss_pred             cEEEeCCHHHHHHHHHHHhcC----CCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968          112 DVYLTLGCTQAIEVILTVLAR----PGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENT  184 (319)
Q Consensus       112 ~i~~~~G~t~ai~~~~~~l~~----~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  184 (319)
                      ++++|+|+++|+.++++++.+    +||+|+++.|+|..+...+   ...|++++.++.+.  ++.+|++++++++++++
T Consensus        87 ~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~  164 (423)
T 3lvm_A           87 EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDT  164 (423)
T ss_dssp             GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTE
T ss_pred             eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCCc
Confidence            999999999999999998874    7999999999999887666   45599999998754  56789999999999889


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +++++++|+||||.+++   +++|.++|+++|+++|+|++|+...    .+..+.   ..+..+++.|+||.++.+|  +
T Consensus       165 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~---~~~~di~~~s~sK~~g~~g--~  232 (423)
T 3lvm_A          165 ILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLS---QLKVDLMSFSGHKIYGPKG--I  232 (423)
T ss_dssp             EEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCTT---TSCCSEEEEESTTTTSCSS--C
T ss_pred             EEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCC----CCcChh---hcCCCEEEechHHhcCCCC--e
Confidence            99999999999999988   8889999999999999999987622    111222   2234599999999887777  8


Q ss_pred             eEEEeeCC
Q 020968          265 GWLVTSDP  272 (319)
Q Consensus       265 G~i~~~~~  272 (319)
                      ||++++++
T Consensus       233 G~~~~~~~  240 (423)
T 3lvm_A          233 GALYVRRK  240 (423)
T ss_dssp             EEEEECBT
T ss_pred             EEEEEecc
Confidence            99998653

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.93  E-value=4.9e-25  Score=201.01  Aligned_cols=235  Identities=14%  Similarity=0.104  Sum_probs=169.8

Q ss_pred             CCCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           43 DTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      .+..+++|+.|.+..  .+. +++.+.+++.+.+...  ....|+ ..+..++++++++++    |  + ++++++|+|+
T Consensus        26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~l~~~la~~~----g--~-~~~v~~~~g~   95 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYE-NPWQEELAHKLVKHF----W--T-EGKVFFANSG   95 (375)
T ss_dssp             TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBC-CHHHHHHHHHHHHTS----S--S-CEEEEEESSH
T ss_pred             CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccC-CHHHHHHHHHHHhhc----C--C-CCeEEEeCch
Confidence            356789999987532  144 7899999999887643  123563 456788998888886    2  3 3899999999


Q ss_pred             HHHHHHHHHH---hc---CCC-CEEEEcCCCCcchHHHHhhCCCe-------------EEEEeccCCCCCcCCHHHHHhh
Q 020968          120 TQAIEVILTV---LA---RPG-ANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAKGWEVDLDAVEAL  179 (319)
Q Consensus       120 t~ai~~~~~~---l~---~~g-d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~  179 (319)
                      ++|+..+++.   +.   ++| |+|++++|+|+.+...+...+..             +..++.       .|+++++++
T Consensus        96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  168 (375)
T 2eh6_A           96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL  168 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence            9999999875   35   678 99999999998876555443321             222221       489999999


Q ss_pred             hccCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968          180 ADENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       180 l~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                      +++++++|++++++||||.+ .+.+++++|.++|+++|+++|+|++|.++...+.. ..+..+....+++   |+||.++
T Consensus       169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~d~~---s~SK~~~  244 (375)
T 2eh6_A          169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHFNLKPDVI---ALAKGLG  244 (375)
T ss_dssp             CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG
T ss_pred             hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhcCCCCCEE---EEccccc
Confidence            98888999999999999998 56888999999999999999999999986544322 2233333223333   7889987


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                       +|+|+||+++++        +++++++... ....+.+++.|.++..++
T Consensus       245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (375)
T 2eh6_A          245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVV  285 (375)
T ss_dssp             -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHH
T ss_pred             -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHH
Confidence             699999999864        3555554421 123355778887765533

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.93  E-value=1.9e-25  Score=207.17  Aligned_cols=243  Identities=13%  Similarity=0.067  Sum_probs=171.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +..+++|+.+.......+ +++.+.+++.+.+.....  ..|.+..+..+||+++++++.   | . .+++|++|+|+++
T Consensus        40 g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~~  113 (426)
T 1sff_A           40 GREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGSE  113 (426)
T ss_dssp             CCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHHH
T ss_pred             CCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchHH
Confidence            556788887763211112 678999999998865322  246667788999999999983   2 1 3489999999999


Q ss_pred             HHHHHHH---HhcCCCCEEEEcCCCCcchH-HHHhhCCCe-------------EEEEeccC---CCCCcCCHHHHHhhhc
Q 020968          122 AIEVILT---VLARPGANILLPRPGFPYYE-ARATHSHLE-------------VRHFDLLP---AKGWEVDLDAVEALAD  181 (319)
Q Consensus       122 ai~~~~~---~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~-------------~~~~~~~~---~~~~~~d~~~l~~~l~  181 (319)
                      |+..+++   .+.++| +|++++|+|+.+. ..+...|.+             +..++...   ..++.+|++.++++++
T Consensus       114 a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~  192 (426)
T 1sff_A          114 AVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFK  192 (426)
T ss_dssp             HHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHH
Confidence            9999988   677776 8999999998754 455555543             55566532   1134578999998886


Q ss_pred             -----cCceEEEEc-CCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          182 -----ENTVALVII-NPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       182 -----~~~~~v~l~-~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                           +++++|+++ +++| || .+++.+++++|.++|+++|+++|+||+|.++.+.+.. ..+.....   .+.+.|||
T Consensus       193 ~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~---~~di~s~s  267 (426)
T 1sff_A          193 NDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTL-FAMEQMGV---APDLTTFA  267 (426)
T ss_dssp             HTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTS---CCSEEEEC
T ss_pred             hccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccch-hhhhhcCC---CCCEEEEc
Confidence                 345566553 4467 99 7889999999999999999999999999987665532 11222221   22344999


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      |+++. |+|+||+++++        ++++.+..... .....+++.|.++..++
T Consensus       268 K~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal  312 (426)
T 1sff_A          268 KSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVL  312 (426)
T ss_dssp             GGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHH
T ss_pred             ccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHH
Confidence            99986 99999999864        45555543222 24456888888877544

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.92  E-value=7.3e-25  Score=201.96  Aligned_cols=233  Identities=16%  Similarity=0.192  Sum_probs=166.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +..+++|+.+.+..+..+ .+|.+.+++.+.+.....  ..| +.....++++.+++++        ..+++++|+|+++
T Consensus        38 g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------~~~~v~~~~gg~~  107 (406)
T 4adb_A           38 GKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT--------FADRVFFCNSGAE  107 (406)
T ss_dssp             CCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS--------SCSEEEEESSHHH
T ss_pred             CCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC--------CCCeEEEeCcHHH
Confidence            566889988832211222 578999999998865321  122 2223455555555554        3459999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcCCHHHHHhhh
Q 020968          122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       122 ai~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                      |+..+++.+..       +| |+|++++|+|+.+...+...+.             ++..++.       .|++++++++
T Consensus       108 a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l  180 (406)
T 4adb_A          108 ANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALI  180 (406)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHh
Confidence            99999998864       66 9999999999887554443332             3333332       4899999999


Q ss_pred             ccCceEEEEcCCCCcccccc--CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968          181 DENTVALVIINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       181 ~~~~~~v~l~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                      ++++++|+++ |+||+|.++  +.+++++|.++|+++|+++|+||+|.++.+.+... .........+++   +|||.++
T Consensus       181 ~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~  255 (406)
T 4adb_A          181 DDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKALG  255 (406)
T ss_dssp             STTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG
T ss_pred             cCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhhc
Confidence            8888888888 999999988  99999999999999999999999999876655432 222233333444   6799998


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                       +|+|+||+++++        ++++.+..... ...+.+++.|.++..++
T Consensus       256 -~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  296 (406)
T 4adb_A          256 -GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVL  296 (406)
T ss_dssp             -TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred             -CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHH
Confidence             999999998853        46666655432 34567888888877654

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.92  E-value=5.6e-25  Score=206.31  Aligned_cols=226  Identities=18%  Similarity=0.169  Sum_probs=168.9

Q ss_pred             CCeEeccCC-CCCCCCCCCCcHHHHHHHHHH---hhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           45 RPLIPLGHG-DPSAFPSFRTASVAVDAIVHS---VRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        45 ~~~i~l~~g-~~~~~~~~~~~~~~~~a~~~~---~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      .++|+|+.| +++    ++.++.+.++....   ........|+ ..+.+ +++++++++.+.+|    .+++++++|++
T Consensus        89 ~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g----~~~~i~~~sGt  158 (464)
T 1ibj_A           89 TLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDK----ADRAFCFTSGM  158 (464)
T ss_dssp             HHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred             CeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhC----CCeEEEECCHH
Confidence            457899987 654    56666676665532   1112234576 34554 67777777776555    24788888889


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC  196 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt  196 (319)
                      +|+..++. ++++||+|+++.|.|..+...    ++..|.+++.++..       |++++++++++++++|++++|+|||
T Consensus       159 ~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Npt  230 (464)
T 1ibj_A          159 AALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPR  230 (464)
T ss_dssp             HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTT
T ss_pred             HHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCC
Confidence            99998885 778999999999999988653    46779998888752       8999999998889999999999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCC
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGI  275 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~  275 (319)
                      |.+++   +++|+++|+++|+++|+|++|....    ...++.    .++++++.|+||+++.+ |+|+||+++++    
T Consensus       231 G~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~----  295 (464)
T 1ibj_A          231 QQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKG----  295 (464)
T ss_dssp             CCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG----TTCSEEEEETTTTTTCSSCCCCEEEEECS----
T ss_pred             CEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh----cCCEEEEECCcccccCCCCCcEEEEEECh----
Confidence            99986   8999999999999999999997622    111221    24579999999998765 99999999864    


Q ss_pred             ccchHHHHHHHHhhh-hcCCcchHHHHHHHHH
Q 020968          276 LQDSGIVDSIKSFLN-ISSDPATFIQFLKSSR  306 (319)
Q Consensus       276 ~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~  306 (319)
                         ++++++++.... .....+++.|.++...
T Consensus       296 ---~~l~~~l~~~~~~~g~~~~~~~~~a~~~a  324 (464)
T 1ibj_A          296 ---EKLAKEVYFLQNSEGSGLAPFDCWLCLRG  324 (464)
T ss_dssp             ---HHHHHHHHHHHHHTTCBCCHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence               247777776654 3345577788775553

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.92  E-value=1.8e-24  Score=197.94  Aligned_cols=202  Identities=12%  Similarity=0.005  Sum_probs=156.7

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC-------
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP-------  133 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~-------  133 (319)
                      .++++.+.+++.+.+..... .+....+..++++.+++++.+.+|  .+++++++|+|+++|+..++.++..+       
T Consensus        40 ~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~  116 (397)
T 3f9t_A           40 SNVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRK  116 (397)
T ss_dssp             CCCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence            35567889999888765321 222222445666666666666555  46789999999999999999998765       


Q ss_pred             ------CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHH
Q 020968          134 ------GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQ  206 (319)
Q Consensus       134 ------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~  206 (319)
                            ||+|+++.|+|..+...++..|++++.++.+.  ++.+|++++++++++ +++++++++|+||||.+.+   ++
T Consensus       117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~  191 (397)
T 3f9t_A          117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IE  191 (397)
T ss_dssp             TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HH
T ss_pred             cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HH
Confidence                  99999999999999999999999999998854  467999999999988 8999999999999999966   88


Q ss_pred             HHHHHHHHcCCEEEEeCCCCCccCCCCCC-------CCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          207 KIAETAKKLGIMVIADEVYDHLAFGNTPF-------VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       207 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~-------~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      +|.++|+++|+++|+|++|+.+..+....       .....+.. +..+++.|++|+ +.+|.|+||++++++
T Consensus       192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~  262 (397)
T 3f9t_A          192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI  262 (397)
T ss_dssp             HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG
T ss_pred             HHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccc-cCCCCCceEEEEeCH
Confidence            89999999999999999998764421110       00111112 345889999997 567889999998764

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.92  E-value=1.5e-24  Score=199.61  Aligned_cols=231  Identities=13%  Similarity=0.096  Sum_probs=172.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC----CCCC--CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF----NCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..+++|+.|+|-   .+..++.+.+++.+.+.....    ..|.  ...+..++|+++++++      +.+ +.++ ++
T Consensus        44 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~-~~  112 (401)
T 1fc4_A           44 GSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAIL-YS  112 (401)
T ss_dssp             SCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEEE-ES
T ss_pred             CccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEEE-eC
Confidence            5678899999642   123589999999988764211    1221  2456789999999998      233 4454 45


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIIN  191 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~  191 (319)
                      ++++++..++++++++||.|+++.|+|..+...++..|.+++.++.       .|++++++.+++      ++++|++++
T Consensus       113 sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~  185 (401)
T 1fc4_A          113 SCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDG  185 (401)
T ss_dssp             CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEES
T ss_pred             ChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeC
Confidence            5577999999999999999999999998888888999999888763       488899988764      688999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccC-CCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEE
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAF-GNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLV  268 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~  268 (319)
                      |+||||.+++   +++|.++|+++|+++|+|++|+ ++.+ ++........+.. +.+++++|+||++ +.+|   ||++
T Consensus       186 ~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~~  258 (401)
T 1fc4_A          186 VFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYTA  258 (401)
T ss_dssp             EETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEEE
T ss_pred             CcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEEE
Confidence            9999999988   8999999999999999999996 7653 3332211122222 3469999999998 5565   9999


Q ss_pred             eeCCCCCccchHHHHHHHHhhh---hcCCcchHHHHHHHHHH
Q 020968          269 TSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l  307 (319)
                      ++.        +++++++....   .....+++.|.++..++
T Consensus       259 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l  292 (401)
T 1fc4_A          259 ARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVL  292 (401)
T ss_dssp             ECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             cCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHH
Confidence            842        57777776442   23466888888777644

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.92  E-value=3.6e-24  Score=195.79  Aligned_cols=220  Identities=14%  Similarity=0.023  Sum_probs=163.8

Q ss_pred             CC-CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TR-PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~-~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +. ++++++.+.++    .++++.+.+++.         .|.   +...+++.+++++.+.+|.. +++++++++|+++|
T Consensus        26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~---~~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a   88 (374)
T 2aeu_A           26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYI---GSSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA   88 (374)
T ss_dssp             CGGGCEECSSCCCC----CCCCHHHHHHHT---------STT---HHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred             CccceeeecccCCC----CCCCHHHHHHHH---------Hhc---CchHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence            45 78999998865    688899999885         121   11345555666555544433 34789999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceE-EEEcCCCCcccc
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA-LVIINPGNPCGN  198 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-v~l~~p~nptG~  198 (319)
                      +..++.++  +||+|+++.|+|.++..   .++..|.+++.+         .|++++++. ++++++ |++++|+||||.
T Consensus        89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~  156 (374)
T 2aeu_A           89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI  156 (374)
T ss_dssp             HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred             HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence            99999988  99999999998876433   677889988877         288999988 778899 999999999996


Q ss_pred             ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968          199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD  278 (319)
Q Consensus       199 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  278 (319)
                        +..++++|.++|+++|+++|+|++|+.+..+.....+....   ...++++|+||+  ++|+|+||+++++       
T Consensus       157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~di~~~S~sK~--l~g~~~G~~~~~~-------  222 (374)
T 2aeu_A          157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL---GADLVVTSTDKL--MEGPRGGLLAGKK-------  222 (374)
T ss_dssp             --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH---TCSEEEEETTSS--SSSCSCEEEEEEH-------
T ss_pred             --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc---CCcEEEecCccc--ccCcceEEEEECH-------
Confidence              56899999999999999999999998764200000001112   235899999999  5678999998853       


Q ss_pred             hHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          279 SGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                       +++++++..... ...++++.|.++..++
T Consensus       223 -~~~~~l~~~~~~~~~~~~~~~~~a~~~al  251 (374)
T 2aeu_A          223 -ELVDKIYIEGTKFGLEAQPPLLAGIYRAL  251 (374)
T ss_dssp             -HHHHHHHHHHHTTTCBCCHHHHHHHHHHH
T ss_pred             -HHHHHHHHhhccccCCCCHHHHHHHHHHH
Confidence             588888776653 3356778887776644

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.92  E-value=7.8e-24  Score=196.82  Aligned_cols=204  Identities=17%  Similarity=0.148  Sum_probs=157.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCC----cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSST----VGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +.++|+|+.|++-   .+..++.+.+++.+.+....  ...|...    ....++++.+++++.      .  ++.++++
T Consensus        63 g~~~id~~~~~~l---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~  131 (427)
T 2w8t_A           63 GKDTILLGTYNYM---GMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFS  131 (427)
T ss_dssp             TEEEEECSCCCTT---CGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEES
T ss_pred             CceEEEEECcccc---cCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEec
Confidence            3557899999741   24578899999998876521  1223222    334788888888872      2  3567777


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPG  193 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~  193 (319)
                      ++++++..++.++.++||.|+++.|+|..+...++..|.+++.++.       .|++.+++++++    ++++|++++++
T Consensus       132 sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~  204 (427)
T 2w8t_A          132 TGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVY  204 (427)
T ss_dssp             CHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEE
T ss_pred             CcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence            7778999999999999999999999999999999999999887763       589999998875    67899999999


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ||||.+++   +++|.++|+++|+++|+||+|..+.++.........++ ..+.++++.|+||+++++|   ||++++.
T Consensus       205 n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~  277 (427)
T 2w8t_A          205 SMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH  277 (427)
T ss_dssp             TTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence            99999987   89999999999999999999999876532211111122 1234799999999998777   9999864

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.92  E-value=5.8e-24  Score=192.29  Aligned_cols=209  Identities=14%  Similarity=0.096  Sum_probs=163.1

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      .+.+|+|+.+.+.     ++++.+.+++.+.+.     .|....|..++++++++++.+.+|  .+++++++|+|+++|+
T Consensus        12 ~p~~i~l~~~~~~-----~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~   79 (359)
T 1svv_A           12 KPKPYSFVNDYSV-----GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN   79 (359)
T ss_dssp             ---CEECSCSCSS-----CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred             CCeeEEecCCCcC-----CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence            4668999996643     678999999998865     355556777888888888877666  4678999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHH--HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccC-------ceEEEEcCCCC
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEA--RATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN-------TVALVIINPGN  194 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-------~~~v~l~~p~n  194 (319)
                      ..+++++.++||+|+++.|+|..+..  .++..|.+++.++.+   ++.+|++++++.++++       +++|++++| |
T Consensus        80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~  155 (359)
T 1svv_A           80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T  155 (359)
T ss_dssp             HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred             HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence            99999999999999999999998876  478899999999863   5789999999998765       789999999 7


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |||.+++.+++++|+++|+++|+++|+|++|..+.++..+. ....+. .....+++.|.+|. +.+ .++|+++++.
T Consensus       156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~  230 (359)
T 1svv_A          156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND  230 (359)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG
T ss_pred             CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc
Confidence            99999999999999999999999999999995543222111 111100 00113788899997 443 5678888743

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.92  E-value=2.9e-24  Score=197.98  Aligned_cols=202  Identities=13%  Similarity=0.106  Sum_probs=158.3

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC---CCCC----CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYS----STVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ++.+.|+.+.+.     ++++.+.+++.+.+.....   ..|.    ...+..++|+++++++      +.++++|++|+
T Consensus        25 ~~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   93 (406)
T 3cai_A           25 DGWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGA   93 (406)
T ss_dssp             SSCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEES
T ss_pred             CCeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeC
Confidence            358889888754     6688999999988764211   1232    2345678999999988      34678999999


Q ss_pred             CHHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHhh----CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEc
Q 020968          118 GCTQAIEVILTVL---ARPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII  190 (319)
Q Consensus       118 G~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~  190 (319)
                      |+++++.+++.++   .++||+|+++.|+|..+...+..    .|.+++.++.++ .++.+|++++++.+++++++|+++
T Consensus        94 g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~  172 (406)
T 3cai_A           94 DRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVN  172 (406)
T ss_dssp             CHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEE
T ss_pred             ChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEe
Confidence            9999999999988   78999999999999876554443    699999998763 345789999999998889999999


Q ss_pred             CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee-EEEe
Q 020968          191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG-WLVT  269 (319)
Q Consensus       191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G-~i~~  269 (319)
                      +|+||||.+++   +++|.++|+++|+++|+|++|..    +..+..+..+   +..+++.|+||.++ ++  +| |+++
T Consensus       173 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~---~~d~~~~s~~K~~g-~~--~G~~~~~  239 (406)
T 3cai_A          173 SASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAA----PYRLLDIRET---DADVVTVNAHAWGG-PP--IGAMVFR  239 (406)
T ss_dssp             SBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTT----TTCCCCHHHH---CCSEEEEEGGGGTS-CS--CEEEEES
T ss_pred             CCcCCccccCC---HHHHHHHHHHcCCEEEEEccccc----CCCCCCchhc---CCCEEEeehhhhcC-CC--cCeEEEE
Confidence            99999999987   78999999999999999999985    2111222222   34588999999864 54  89 9987


Q ss_pred             eC
Q 020968          270 SD  271 (319)
Q Consensus       270 ~~  271 (319)
                      ++
T Consensus       240 ~~  241 (406)
T 3cai_A          240 DP  241 (406)
T ss_dssp             CH
T ss_pred             eh
Confidence            53

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.92  E-value=2.9e-24  Score=199.69  Aligned_cols=202  Identities=17%  Similarity=0.168  Sum_probs=144.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc---------CCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV---------GILPARRAIADYLNRDLPYKLSPDDVY  114 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~~~~~~g~~~~~~~i~  114 (319)
                      ..+.+.|+.+.+.     ++++.+.+++.+.+...  ..|+...         ...++|+++++++      ++++++|+
T Consensus        16 ~~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~   82 (432)
T 3a9z_A           16 PNRKVYMDYNATT-----PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDII   82 (432)
T ss_dssp             --CCEECBTTTCC-----CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEE
T ss_pred             CCCcEEeeCCccC-----CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEE
Confidence            3578899988764     67899999999887642  2343321         1368999999988      34678999


Q ss_pred             EeCCHHHHHHHHHHHhc--------CCCCEEEEcCCCCcch-----------------HHHHhhCCCeEEEEeccCCCCC
Q 020968          115 LTLGCTQAIEVILTVLA--------RPGANILLPRPGFPYY-----------------EARATHSHLEVRHFDLLPAKGW  169 (319)
Q Consensus       115 ~~~G~t~ai~~~~~~l~--------~~gd~Vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~  169 (319)
                      +|+|+++++..++.++.        ++||+|+++.|+|..+                 ...++..|.+++.++.+. .++
T Consensus        83 ~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~-~~~  161 (432)
T 3a9z_A           83 FTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK-VNG  161 (432)
T ss_dssp             EESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCT-TTS
T ss_pred             EeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCc-ccC
Confidence            99999999999999886        5899999999999765                 344456799999998754 245


Q ss_pred             cCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcC----------CEEEEeCCCCCccCCCCCCCCCc
Q 020968          170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG----------IMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       170 ~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                      .+|++++++++++++++|++++|+||||.+++   +++|.++|++++          +++|+|++|+...    .+..+.
T Consensus       162 ~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~  234 (432)
T 3a9z_A          162 QVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVE  234 (432)
T ss_dssp             SCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHH
T ss_pred             CcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChh
Confidence            78999999999888999999999999999998   567888899998          9999999997632    222222


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ....   .+++.|+||++   |.|+||++++++
T Consensus       235 ~~~~---d~~~~s~~K~~---g~~~G~~~~~~~  261 (432)
T 3a9z_A          235 DLGV---DFLTIVGHKFY---GPRIGALYVRGV  261 (432)
T ss_dssp             HHCC---SEEEEEGGGTT---CCSCEEEEETTB
T ss_pred             hcCC---CEEEEehhHhc---CCcceEEEEccc
Confidence            2222   26689999986   467999998753

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.92  E-value=9.1e-25  Score=200.97  Aligned_cols=235  Identities=13%  Similarity=0.108  Sum_probs=164.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..+++|+.+.......+ .++.+.+++.+.+.....  ++. ....++++.+++.+.+..|    .+++++++|+++|+
T Consensus        39 g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a~  110 (397)
T 2ord_A           39 GNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEAN  110 (397)
T ss_dssp             CCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHHH
T ss_pred             CCEEEECCccccccccCC-CCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHH
Confidence            566889987721111112 578999999988765321  111 1112444445555444333    57999999999999


Q ss_pred             HHHHHHhcC------C-CCEEEEcCCCCcch-HHHHhhCCCe------------EEEEeccCCCCCcCCHHHHHhhhccC
Q 020968          124 EVILTVLAR------P-GANILLPRPGFPYY-EARATHSHLE------------VRHFDLLPAKGWEVDLDAVEALADEN  183 (319)
Q Consensus       124 ~~~~~~l~~------~-gd~Vl~~~p~~~~~-~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~  183 (319)
                      ..+++++..      + ++.|++.+|+|.+. ...+...|.+            +..++.       .|++++++.++++
T Consensus       111 ~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~  183 (397)
T 2ord_A          111 EAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSED  183 (397)
T ss_dssp             HHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTT
T ss_pred             HHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcC
Confidence            999998763      4 47899999999664 4466677765            555553       3899999999888


Q ss_pred             ceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968          184 TVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW  262 (319)
Q Consensus       184 ~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~  262 (319)
                      +++|++++|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+.. .++..+....+++   |+||.++ +|+
T Consensus       184 ~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G~  258 (397)
T 2ord_A          184 VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GGV  258 (397)
T ss_dssp             EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TTS
T ss_pred             eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CCc
Confidence            999999999999999 999999999999999999999999999987665532 2222233222333   7899987 899


Q ss_pred             eeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          263 RLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       263 r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      |+||++++++        ++ .++... ......+++.|.++..++
T Consensus       259 r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l  295 (397)
T 2ord_A          259 PIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVI  295 (397)
T ss_dssp             CCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred             CeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHH
Confidence            9999998753        33 332211 223456788888777654

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.92  E-value=1.2e-24  Score=203.93  Aligned_cols=244  Identities=14%  Similarity=0.139  Sum_probs=173.5

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC--CCCCC---CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP--SAFPS---FRTASVAVDAIVHSVRSARFNCYSSTVGILPAR   93 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~--~~~~~---~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr   93 (319)
                      +++.+.++.+..+..+..+ + +..+.++++|+.|.+  +....   .++++.+.+++.    .. ...|.+..+..+||
T Consensus         9 ~~~~~~~~~~~~~~~~~~~-~-~~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~~~~~~l~   81 (456)
T 2ez2_A            9 RIKSVETVSMIPRDERLKK-M-QEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGSENFYHLE   81 (456)
T ss_dssp             CCCCCCCCCCCCHHHHHHH-H-HHTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSCHHHHHHH
T ss_pred             eeeeecccCCCCHHHHHHH-H-HHCCCCcccCCcccceeeeccccCCccCCHHHHHHhh----cc-hhhcccChhHHHHH
Confidence            4556666655444332221 2 123566777777755  32111   244567766665    22 23677777889999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC-cchHHHHhhCCCeEEEEeccCC----C-
Q 020968           94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF-PYYEARATHSHLEVRHFDLLPA----K-  167 (319)
Q Consensus        94 ~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~----~-  167 (319)
                      +++++++.        .+++++++|+++|+..++++++++||  +++.|+| ..+...+...|.+++.++++..    . 
T Consensus        82 ~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~  151 (456)
T 2ez2_A           82 RTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLN  151 (456)
T ss_dssp             HHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCC
T ss_pred             HHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEeccccccccccc
Confidence            99999992        35899999999999999999999999  7888999 7778888999999999887631    2 


Q ss_pred             ---CCcCCHHHHHhhhccCc----eEEEEcCCCC-ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC----------cc
Q 020968          168 ---GWEVDLDAVEALADENT----VALVIINPGN-PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH----------LA  229 (319)
Q Consensus       168 ---~~~~d~~~l~~~l~~~~----~~v~l~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~----------~~  229 (319)
                         ++.+|++++++++++++    ++|++++|+| |||.+++.+++++|+++|+++|+++|+|++|..          +.
T Consensus       152 ~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~  231 (456)
T 2ez2_A          152 IAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQG  231 (456)
T ss_dssp             CSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTT
T ss_pred             ccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccc
Confidence               36789999999987654    7899999998 999999999999999999999999999999986          34


Q ss_pred             CCCCCCCCCc-ccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          230 FGNTPFVPMG-VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       230 ~~~~~~~~~~-~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      +.+....++. ......+++++ |++|. +++| |.||+++++       ++++++++...
T Consensus       232 ~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~-------~~~~~~~~~~~  282 (456)
T 2ez2_A          232 FENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND-------DEMFSSAKELV  282 (456)
T ss_dssp             CTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-------HHHHHHHHHHH
T ss_pred             cCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-------HHHHHHHHHHH
Confidence            4443211100 01111235555 78887 4567 789999843       24777666544

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.92  E-value=2.2e-23  Score=192.55  Aligned_cols=204  Identities=13%  Similarity=0.133  Sum_probs=157.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--C----CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--F----NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~----~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..+++|+.+++   ..+..++.+.+++.+.+....  .    ..|+......++++++++++.        .+..++++
T Consensus        58 g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~  126 (409)
T 3kki_A           58 SPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLSQ  126 (409)
T ss_dssp             CTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEES
T ss_pred             CCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEec
Confidence            456888888763   235678999999999887621  1    122333456788999998882        23456666


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCcc
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPC  196 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~npt  196 (319)
                      ++++++..++++++++||.|+++.|.|..+...+...|.+++.++.       .|++++++.+.+ ++++|++++|+|||
T Consensus       127 sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~npt  199 (409)
T 3kki_A          127 SGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYSTL  199 (409)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTTT
T ss_pred             chHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCC
Confidence            6789999999999999999999999999999999999999887764       589999998875 57899999999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |.+++   +++|.++|+++|+++|+||+|....++.........+.. .+..|++.|+||+++++|   ||++++.
T Consensus       200 G~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~  269 (409)
T 3kki_A          200 GTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN  269 (409)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS
T ss_pred             CCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH
Confidence            99988   899999999999999999999985543221111111111 133589999999998775   9998865

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.92  E-value=4e-24  Score=196.03  Aligned_cols=208  Identities=16%  Similarity=0.092  Sum_probs=162.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGC  119 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~  119 (319)
                      ..+..++++.|.      +++++.+.+++.+.+..    .|.+  ..+..++|+++++++      +.+++ ++++|+|+
T Consensus        16 ~~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~   79 (393)
T 2huf_A           16 VTPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASG   79 (393)
T ss_dssp             CCCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCH
T ss_pred             CCCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcH
Confidence            456778888775      46788999888766543    2322  345678888888888      34554 89999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCcc
Q 020968          120 TQAIEVILTVLARPGANILLPRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPC  196 (319)
Q Consensus       120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~npt  196 (319)
                      ++|+..+++++.++||+|+++.|+|.++  ...++..|.+++.++.+.  ++.+|++++++.+++ ++++|++++|+|||
T Consensus        80 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~npt  157 (393)
T 2huf_A           80 HGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSST  157 (393)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred             HHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCc
Confidence            9999999999999999999999999874  344567899999998754  357999999999987 88999999999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc-cCCCcceeeEEEeeCCCCC
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR-WIVPGWRLGWLVTSDPNGI  275 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~-~~~~G~r~G~i~~~~~~~~  275 (319)
                      |.+++   +++|.++|+++|+++|+|+++...    ..+..+   ...+..+++.|+||+ ++.+|+  ||+++++    
T Consensus       158 G~~~~---l~~i~~~~~~~~~~li~D~a~~~~----~~~~~~---~~~~~d~~~~s~sK~l~g~~G~--G~~~~~~----  221 (393)
T 2huf_A          158 GVLQG---LEGVGALCHQHNCLLIVDTVASLG----GAPMFM---DRWEIDAMYTGSQKVLGAPPGI--TPVSFSH----  221 (393)
T ss_dssp             TEECC---CTTHHHHHHHTTCEEEEECTTTBT----TBCCCT---TTTTCSEEECCSSSTTCCCSSC--EEEEECH----
T ss_pred             cccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCcch---hhcCccEEEECCCcccccCCCe--EEEEECH----
Confidence            99988   889999999999999999997642    111122   222456899999997 456786  9999853    


Q ss_pred             ccchHHHHHHHHh
Q 020968          276 LQDSGIVDSIKSF  288 (319)
Q Consensus       276 ~~~~~~~~~~~~~  288 (319)
                          +++++++..
T Consensus       222 ----~~~~~~~~~  230 (393)
T 2huf_A          222 ----RAVERYKRR  230 (393)
T ss_dssp             ----HHHHHHHTC
T ss_pred             ----HHHHHHhhc
Confidence                577776643

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.92  E-value=7.5e-24  Score=195.02  Aligned_cols=231  Identities=16%  Similarity=0.128  Sum_probs=166.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .++++|..++..   .++.+|.+.+++.+.+....      ...|+...+..++|+++++++.      . ++++++++|
T Consensus        46 ~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG  115 (401)
T 2bwn_A           46 QDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSSA  115 (401)
T ss_dssp             EEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESCH
T ss_pred             CcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECCc
Confidence            345777776532   14456789999998876521      1235555678899999999983      2 467888777


Q ss_pred             HHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCC
Q 020968          119 CTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p  192 (319)
                      ++ ++..++..+.  .+||+|+++.|+|..+...++..|.+++.++.+       |++.+++.++    +++++|++++|
T Consensus       116 ~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~~  187 (401)
T 2bwn_A          116 YN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFESV  187 (401)
T ss_dssp             HH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEESB
T ss_pred             HH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEecC
Confidence            66 7776666653  589999999999999998899999999888852       7888888776    57889999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||||.+++   +++|.++|+++|+++|+|++|....++......+..... ...+++++|+||+|+++|   ||++++.
T Consensus       188 ~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~  261 (401)
T 2bwn_A          188 YSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASA  261 (401)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECH
T ss_pred             cCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCH
Confidence            999999988   889999999999999999999965443221111111111 123689999999999888   9998742


Q ss_pred             CCCCccchHHHHHHHHhhh---hcCCcchHHHHHHHHHH
Q 020968          272 PNGILQDSGIVDSIKSFLN---ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l  307 (319)
                              ++++.++....   ...+.+++.|.++..++
T Consensus       262 --------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al  292 (401)
T 2bwn_A          262 --------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASI  292 (401)
T ss_dssp             --------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHH
T ss_pred             --------HHHHHHHHhCcCceecCCCCHHHHHHHHHHH
Confidence                    46666664322   12233456666555443

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.92  E-value=2.3e-24  Score=194.51  Aligned_cols=214  Identities=18%  Similarity=0.196  Sum_probs=157.3

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .++|+|+.+...     .+++.+.+++.+.....  ..|++..+..+||++++++++        .+++++++|+++++.
T Consensus         3 ~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~~--~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~   67 (347)
T 1jg8_A            3 HMMIDLRSDTVT-----KPTEEMRKAMAQAEVGD--DVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQ   67 (347)
T ss_dssp             --CEECSCGGGC-----CCCHHHHHHHHTCCCCC--GGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHH
T ss_pred             ceEEEeccccCC-----CCCHHHHHHHhcCCCCC--cccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHHH
Confidence            467899999754     35688888887653221  257777788999999999983        347888899999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCc
Q 020968          125 VILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNP  195 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~np  195 (319)
                      +++.++.++||+|+++.|+|....   ..+...|.+++.+ ..  .++.+|++++++++++      ++++|++++|+||
T Consensus        68 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~np  144 (347)
T 1jg8_A           68 VSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNR  144 (347)
T ss_dssp             HHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTT
T ss_pred             HHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccccc
Confidence            999999999999999999996532   2567789998887 32  2456899999999875      5789999999999


Q ss_pred             c-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc--cCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          196 C-GNVYTYQHLQKIAETAKKLGIMVIADEVYDHL--AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       196 t-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~--~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      | |.+++.+++++|+++|+++|+++|+|++|...  .+.+.....+.  ...+  .++.|+||+++++   +||+++.+ 
T Consensus       145 t~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d--~~~~s~sK~l~~~---~G~~~~~~-  216 (347)
T 1jg8_A          145 SGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA--GYAD--SVMFCLSKGLCAP---VGSVVVGD-  216 (347)
T ss_dssp             TTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH--HTCS--EEEEESSSTTCCS---SCEEEEEC-
T ss_pred             cCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc--cccc--EEEEecccccCCC---ceEEEEcC-
Confidence            9 99999999999999999999999999987531  11121111111  1112  3445899998654   67544333 


Q ss_pred             CCCccchHHHHHHHHhhh
Q 020968          273 NGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~  290 (319)
                            ++++++++..+.
T Consensus       217 ------~~~~~~~~~~~~  228 (347)
T 1jg8_A          217 ------RDFIERARKARK  228 (347)
T ss_dssp             ------HHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHH
Confidence                  246776665544

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.91  E-value=6.3e-24  Score=194.66  Aligned_cols=207  Identities=14%  Similarity=0.061  Sum_probs=156.5

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      +.+.|+.+.+.     ++++.+.+++.+.+..  ...|....+..++|+++++++      +.+++++++|+|+++++..
T Consensus         8 ~~~yl~~~~~~-----~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~   74 (392)
T 2z9v_A            8 DPVITLTAGPV-----NAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEA   74 (392)
T ss_dssp             CCSEECSSSCC-----CCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHH
T ss_pred             CcceeecCCCc-----CCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHH
Confidence            44666666543     6778999988776543  111222335678888888887      3457899999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcCCCCccccccC
Q 020968          126 ILTVLARPGANILLPRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       126 ~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~  201 (319)
                      +++++.++||+|+++.|+|.++  ...++..|.+++.++.+.  ++.+|+++++++++  +++++|++++|+||||.+++
T Consensus        75 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~  152 (392)
T 2z9v_A           75 AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP  152 (392)
T ss_dssp             HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred             HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence            9999999999999999999775  344566799999998754  34689999999984  47889999999999999987


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEeeCCCCCccchH
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                         +++|.++|+++|+++|+|++|+..    ..+..+..+   +..++++|+||++ +.+|  +||+++++        +
T Consensus       153 ---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~~--------~  212 (392)
T 2z9v_A          153 ---IDAIGALVSAHGAYLIVDAVSSFG----GMKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVSE--------R  212 (392)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTBT----TBSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEECH--------H
T ss_pred             ---HHHHHHHHHHcCCeEEEEcccccC----Ccccccccc---cceEEEecCcccccCCCc--eeEEEECH--------H
Confidence               789999999999999999999742    111222222   2458999999964 3456  49999853        4


Q ss_pred             HHHHHHH
Q 020968          281 IVDSIKS  287 (319)
Q Consensus       281 ~~~~~~~  287 (319)
                      ++++++.
T Consensus       213 ~~~~l~~  219 (392)
T 2z9v_A          213 AWAKMKA  219 (392)
T ss_dssp             HHHHHHT
T ss_pred             HHHHhhh
Confidence            6666653

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.91  E-value=4.6e-23  Score=188.91  Aligned_cols=185  Identities=17%  Similarity=0.241  Sum_probs=151.0

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCC
Q 020968           65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG  143 (319)
Q Consensus        65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~  143 (319)
                      +.+.+++.+.+....+ .|.+..+..++|+++++++..      + +.|++++| ++|++++++++ .++||+|+++.|+
T Consensus        17 ~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~~------~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~   87 (388)
T 1b9h_A           17 DAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHGA------A-HALAVTNG-THALELALQVMGVGPGTEVIVPAFT   87 (388)
T ss_dssp             HHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTTC------S-EEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred             HHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhCC------C-eEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCc
Confidence            8999999998876533 566667889999999999832      2 45666665 99999999999 8999999999999


Q ss_pred             CcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968          144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE  223 (319)
Q Consensus       144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~  223 (319)
                      |..+...++..|++++.++.++ +++.+|++++++++++++++|+   |+||||.+.+   +++|.++|+++|+++|+|+
T Consensus        88 ~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D~  160 (388)
T 1b9h_A           88 FISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQDA  160 (388)
T ss_dssp             CTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEEC
T ss_pred             cHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEec
Confidence            9999999999999999999864 3478999999999987777665   9999999965   8999999999999999999


Q ss_pred             CCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          224 VYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       224 a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      +|+. ..+.+.   .+..+.    ++.+.||||.++++|.|+||++++++
T Consensus       161 a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~  203 (388)
T 1b9h_A          161 AHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDG  203 (388)
T ss_dssp             TTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred             chhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCH
Confidence            9986 333332   122222    48899999877787889999998763

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.91  E-value=8.7e-24  Score=194.73  Aligned_cols=207  Identities=18%  Similarity=0.184  Sum_probs=165.9

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      .++++|+.|.+.      .++.+.+++.+.+...   .|.+..+..++|+++++++..        +++++++|+++|+.
T Consensus        30 ~~~id~~~~~~~------~~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~~--------~~~v~~~~Gt~a~~   92 (399)
T 2oga_A           30 VPFLDLKAAYEE------LRAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCET--------DHAVGVNSGMDALQ   92 (399)
T ss_dssp             BCSCCHHHHHHH------THHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTTS--------SEEEEESCHHHHHH
T ss_pred             CcccccCcCCCC------CCHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHCC--------CeEEEecCHHHHHH
Confidence            468899998854      2388999998887652   576667789999999999832        36788888899999


Q ss_pred             HHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          125 VILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       125 ~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      .+++++ +++||+|+++.|+|..+...++..|.+++.++.++ +++.+|++++++.+++++++|+   |+||||.+.+  
T Consensus        93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~--  166 (399)
T 2oga_A           93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD--  166 (399)
T ss_dssp             HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred             HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence            999999 89999999999999999999999999999998864 3578999999999987777665   5789999866  


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                       +++|.++|+++|+++|+|++|..+. +++..   +..+    ..+++.|+  ||.++.+| |+||+++++       ++
T Consensus       167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~----~di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~  230 (399)
T 2oga_A          167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAG----SSVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE  230 (399)
T ss_dssp             -HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCT----TCEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred             -HHHHHHHHHHcCCEEEEECcccccCccCCee---cccc----cCEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence             8999999999999999999998753 33221   1111    13888898  79998889 999999864       24


Q ss_pred             HHHHHHHhhh
Q 020968          281 IVDSIKSFLN  290 (319)
Q Consensus       281 ~~~~~~~~~~  290 (319)
                      ++++++....
T Consensus       231 ~~~~l~~~~~  240 (399)
T 2oga_A          231 LAERLRMLRN  240 (399)
T ss_dssp             HHHHHHHHHB
T ss_pred             HHHHHHHHHh
Confidence            7777766543

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.91  E-value=1.5e-23  Score=192.37  Aligned_cols=188  Identities=12%  Similarity=0.110  Sum_probs=147.3

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANI  137 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~V  137 (319)
                      .++++.+.+++.+.+..    .|.+.  ....++|+++++++.      .+++ ++++|+|+++++..++.+++++||+|
T Consensus        27 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v   96 (396)
T 2ch1_A           27 SNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEGDRV   96 (396)
T ss_dssp             CCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence            46678888877654422    34432  236899999999983      4566 89999999999999999999999999


Q ss_pred             EEcCCCCcchH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968          138 LLPRPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKK  214 (319)
Q Consensus       138 l~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  214 (319)
                      +++.|+|..+.  ..++..|.+++.++.+.  ++.+|++++++.+++ ++++|++++|+||||.+++   +++|.++|++
T Consensus        97 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~  171 (396)
T 2ch1_A           97 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ  171 (396)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHH
Confidence            99999999874  47788999999998753  567999999999987 7899999999999999988   8899999999


Q ss_pred             cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       215 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +|+++|+|++|...   . .+..+..+   +..+++.|++|.++. +.++|++++++
T Consensus       172 ~~~~li~Dea~~~g---~-~~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~  220 (396)
T 2ch1_A          172 HDCLLIVDAVASLC---G-VPFYMDKW---EIDAVYTGAQKVLGA-PPGITPISISP  220 (396)
T ss_dssp             TTCEEEEECTTTBT---T-BCCCTTTT---TCCEEECCCC-CCCC-CSSCEEEEECH
T ss_pred             cCCEEEEEcccccc---C-Cccchhhc---CcCEEEEcCCccccC-CCCeEEEEECH
Confidence            99999999999831   1 12222222   224777899997543 34569998853

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.91  E-value=3.2e-23  Score=189.06  Aligned_cols=198  Identities=16%  Similarity=0.127  Sum_probs=154.0

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHhhcCC---CCCCCC----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSAR---FNCYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .|+.+.+.     ++++.+.+++.+.+....   ...|..    .....++|+++++++      +.+++++++|+|+++
T Consensus         3 yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~   71 (382)
T 4eb5_A            3 YFDYTSAK-----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATE   71 (382)
T ss_dssp             BCBTTTCC-----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHH
T ss_pred             eeccCCCC-----CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHH
Confidence            45555543     678999999999876421   111332    134577888888887      345679999999999


Q ss_pred             HHHHHHHHhc----CCCCEEEEcCCCCcchHHHHh---hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCC
Q 020968          122 AIEVILTVLA----RPGANILLPRPGFPYYEARAT---HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGN  194 (319)
Q Consensus       122 ai~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~n  194 (319)
                      |+.+++.++.    ++||+|+++.|+|+.+...+.   ..|++++.++.+.  ++.+|++++++.+++++++|++++|+|
T Consensus        72 a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~n  149 (382)
T 4eb5_A           72 ANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANN  149 (382)
T ss_dssp             HHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCT
T ss_pred             HHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCC
Confidence            9999999997    899999999999998766554   4799999998853  467999999999988889999999999


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      |||.+++   +++|.++|+++|++ |+|++|+.    +..+..+..+   +..++++|+||.++.+|  +||++++++
T Consensus       150 ptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~  214 (382)
T 4eb5_A          150 EIGTIQP---VEEISEVLAGKAAL-HIDATASV----GQIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKE  214 (382)
T ss_dssp             TTCBBCC---HHHHHHHHTTSSEE-EEECTTTB----TTBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETT
T ss_pred             CccccCC---HHHHHHHHHHCCCE-EEEcchhc----CCcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccc
Confidence            9999987   78999999999999 99999983    1111122222   34589999999977666  799988764

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.91  E-value=2e-23  Score=191.58  Aligned_cols=235  Identities=14%  Similarity=0.094  Sum_probs=166.1

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..++||+.+.+..... ..+|.+.+++.+.+...... .+.+.....++++.+++++        ..+++++++|+++|
T Consensus        35 g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~a  105 (392)
T 3ruy_A           35 GNRYMDLLSAYSAVNQG-HRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAEA  105 (392)
T ss_dssp             CCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHHH
T ss_pred             CCEEEEcCCChhhhccC-CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHHH
Confidence            56688888775331111 15799999999988653221 1122345577888888777        36899999999999


Q ss_pred             HHHHHHHhcCC----------CCEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcCCHHHHHhh
Q 020968          123 IEVILTVLARP----------GANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEAL  179 (319)
Q Consensus       123 i~~~~~~l~~~----------gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~  179 (319)
                      +..+++.+..+          +++|+++.|+|+++...+...+.             ++..++.       .|+++++++
T Consensus       106 ~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  178 (392)
T 3ruy_A          106 VETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAA  178 (392)
T ss_dssp             HHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHHH
Confidence            99999877644          68999999999876555443322             1333332       289999999


Q ss_pred             hccCceEEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968          180 ADENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       180 l~~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                      +++++++|++++|+||||.+++.++ +++|.++|+++|+++|+||+|.++.+.+... .........+++   ++||.+ 
T Consensus       179 l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l-  253 (392)
T 3ruy_A          179 ITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL-  253 (392)
T ss_dssp             CCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG-
T ss_pred             hccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh-
Confidence            9888999999999999999996566 9999999999999999999998877655432 222222222333   678984 


Q ss_pred             CCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          259 VPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       259 ~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      .+| +|+||+++++        ++++.+..... .....+++.|.++..++
T Consensus       254 ~gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  296 (392)
T 3ruy_A          254 GGGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAAL  296 (392)
T ss_dssp             GTTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred             hCChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHH
Confidence            346 9999999853        46655554333 24567888888877754

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.91  E-value=4.2e-23  Score=191.41  Aligned_cols=247  Identities=15%  Similarity=0.124  Sum_probs=160.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..+++|+.+.+.....+..+|.+.+++.+++....  .|++..+..+++..+++.+.+..|... +++|++|+|+++++
T Consensus        41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~  117 (419)
T 2eo5_A           41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAI  117 (419)
T ss_dssp             SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHH
T ss_pred             CCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHH
Confidence            456789988874321112227999999999886542  233222333445555555555555332 67999999999999


Q ss_pred             HHHHHHhcC-CCCEEEEcCCCCcchHHH-HhhC-------------CCeEEEEeccCCC--CCc------------CCHH
Q 020968          124 EVILTVLAR-PGANILLPRPGFPYYEAR-ATHS-------------HLEVRHFDLLPAK--GWE------------VDLD  174 (319)
Q Consensus       124 ~~~~~~l~~-~gd~Vl~~~p~~~~~~~~-~~~~-------------g~~~~~~~~~~~~--~~~------------~d~~  174 (319)
                      ..+++.+.. +|++|++..|+|+++... ....             ..++..++.+...  .|+            +|++
T Consensus       118 ~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~  197 (419)
T 2eo5_A          118 EASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIE  197 (419)
T ss_dssp             HHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHH
Confidence            999987654 489999999999864432 2221             1245666653211  112            3678


Q ss_pred             HHH-hhhcc----CceEEEEcCCC-Ccccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCe
Q 020968          175 AVE-ALADE----NTVALVIINPG-NPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV  247 (319)
Q Consensus       175 ~l~-~~l~~----~~~~v~l~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~v  247 (319)
                      +++ +++++    ....+++++|+ ||||. +++.+++++|.++|+++|+++|+||+|.++.+.+.. ..+.......++
T Consensus       198 ~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~d~  276 (419)
T 2eo5_A          198 FIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVPDV  276 (419)
T ss_dssp             HHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSE
T ss_pred             HHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCCCE
Confidence            998 88763    23345567775 67896 678888999999999999999999999988665532 122222222333


Q ss_pred             EEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          248 LTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       248 i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      +   ||||.|+. | +|+||++++++        ++ .+......+.+.++++|.++..++
T Consensus       277 ~---t~sK~~~~-G~~riG~~~~~~~--------~~-~~~~~~~~t~~~n~~~~~aa~aal  324 (419)
T 2eo5_A          277 I---TLAKALGG-GIMPIGATIFRKD--------LD-FKPGMHSNTFGGNALACAIGSKVI  324 (419)
T ss_dssp             E---EECGGGGT-TTSCCEEEEEEGG--------GC-CC------CCCCCHHHHHHHHHHH
T ss_pred             E---EecccccC-CccceEEEEEchH--------hh-cCCcccCCCCCCCHHHHHHHHHHH
Confidence            3   79999874 9 99999998753        33 332122234566888998877755

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.90  E-value=2.8e-23  Score=187.43  Aligned_cols=187  Identities=21%  Similarity=0.203  Sum_probs=144.1

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP  140 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~  140 (319)
                      .++++.+.+++.+.+..  ...|....+..++|+++++++      +.+++++++|+|+++|+..+++++.++||+|+++
T Consensus        10 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~   81 (352)
T 1iug_A           10 VRLHPKALEALARPQLH--HRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP   81 (352)
T ss_dssp             CCCCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence            47789999999877642  111222235678999999998      3456899999999999999999999999999999


Q ss_pred             CCCCcchH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--C
Q 020968          141 RPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--G  216 (319)
Q Consensus       141 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~  216 (319)
                      .|+|.++.  ..++..|.+++.++.+.  ++.+|++++++   +++++|++++|+||||.+++   +++|.++|+++  |
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~  153 (352)
T 1iug_A           82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE  153 (352)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred             eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence            99998864  45567899999998753  34688888876   56889999999999999987   78999999999  9


Q ss_pred             CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +++|+|++|+..    ..+..+..+   +..++++|+||+++.+ .++||+++++
T Consensus       154 ~~li~D~a~~~~----~~~~~~~~~---~~d~~~~s~~K~~~~~-~g~G~~~~~~  200 (352)
T 1iug_A          154 GLVGADMVTSLL----VGEVALEAM---GVDAAASGSQKGLMCP-PGLGFVALSP  200 (352)
T ss_dssp             CEEEEECTTTBT----TBCCCSGGG---TCSEEEEESSSTTCCC-SCEEEEEECH
T ss_pred             CEEEEECCcccc----Ccceecccc---CeeEEEecCcccccCC-CceeEEEECH
Confidence            999999999741    111122222   2458899999954333 3489999854

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.90  E-value=3.1e-23  Score=192.80  Aligned_cols=247  Identities=13%  Similarity=0.090  Sum_probs=159.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..+.+.....+ .+|.+.+++.+++....  .|....+..+.++++++++.+..+  .+.++|++|+|++++
T Consensus        27 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea  101 (430)
T 3i4j_A           27 AGRRYLDGSSGALVANIGH-GRAEVGERMAAQAARLP--FVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA  101 (430)
T ss_dssp             TSCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHHHCC--CCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccccCC-CCHHHHHHHHHHHHhcc--cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence            3567899988743221112 38899999998876532  344434556677777777776654  456799999999999


Q ss_pred             HHHHHHHhc--------CCCCEEEEcCCCCcchHHHHhhCCCe---------------EEEEeccCC-CCCcCCHHHHHh
Q 020968          123 IEVILTVLA--------RPGANILLPRPGFPYYEARATHSHLE---------------VRHFDLLPA-KGWEVDLDAVEA  178 (319)
Q Consensus       123 i~~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~-~~~~~d~~~l~~  178 (319)
                      +..+++.+.        ..+++|++..|+|+++...+...+..               +..++.... .....|++.+++
T Consensus       102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~  181 (430)
T 3i4j_A          102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA  181 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence            999999876        34789999999998876544433321               112221100 001235588888


Q ss_pred             hhcc---CceEEEEcCC-CC-cccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEe
Q 020968          179 LADE---NTVALVIINP-GN-PCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLG  251 (319)
Q Consensus       179 ~l~~---~~~~v~l~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~  251 (319)
                      +++.   +..++++++| +| ++|. +++.+++++|.++|+++|+++|+||+|.++.+.+.. .....+ ....+++   
T Consensus       182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~di~---  257 (430)
T 3i4j_A          182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPDIA---  257 (430)
T ss_dssp             HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCSEE---
T ss_pred             HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCcEE---
Confidence            8762   3445555566 66 8886 678888999999999999999999999998766532 222222 2222233   


Q ss_pred             cCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH
Q 020968          252 SISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       252 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l  307 (319)
                      +|||+++ +| +|+||++++.        ++++.+...     ...+.+.++++|.++..++
T Consensus       258 t~sK~l~-~G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal  310 (430)
T 3i4j_A          258 VLGKGLA-AGYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVL  310 (430)
T ss_dssp             EECGGGT-TTSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHH
T ss_pred             EEccccc-CCccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHH
Confidence            6899987 49 9999999853        588888763     2334567888888776654

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.90  E-value=1.4e-23  Score=189.59  Aligned_cols=214  Identities=13%  Similarity=0.111  Sum_probs=157.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      .+++|+|+.+.+     .++++.+.+++.+.... ....|++.....++++.+++++    |   ...++++++|+++++
T Consensus         6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~   72 (356)
T 1v72_A            6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN   72 (356)
T ss_dssp             CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred             CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence            567899998864     36789999999887632 1235655445566666666666    3   244699999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHH--HhhC--CCeEEEEeccCCCCCcCCHHHHHh-hhcc-------CceEEEEcC
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEAR--ATHS--HLEVRHFDLLPAKGWEVDLDAVEA-LADE-------NTVALVIIN  191 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~~~l~~-~l~~-------~~~~v~l~~  191 (319)
                      ..+++++.++||+|+++.|+|..+...  +...  |.+++.++.+   ++.+|++++++ ++++       ++++|++++
T Consensus        73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~  149 (356)
T 1v72_A           73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ  149 (356)
T ss_dssp             HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred             HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence            999999999999999999998765544  5666  9999888763   36799999999 8875       578999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc--CCCCCCCCCcccCCCCCeEEEecCccccCCCcceee--EE
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA--FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG--WL  267 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G--~i  267 (319)
                      |+| ||.+++.+++++|+++|+++|+++|+|++|..+.  +.+..+..+ .+..... +++.|+||+ ++   ++|  |+
T Consensus       150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~---~~G~g~~  222 (356)
T 1v72_A          150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GV---LAAEAIV  222 (356)
T ss_dssp             SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TC---SSCEEEE
T ss_pred             CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CC---cCccEEE
Confidence            987 9999999999999999999999999999997642  122222111 1111122 445699999 43   455  77


Q ss_pred             EeeCCCCCccchHHHHHHHHh
Q 020968          268 VTSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~  288 (319)
                      +++.        +++++++..
T Consensus       223 ~~~~--------~~~~~~~~~  235 (356)
T 1v72_A          223 LFNT--------SLATEMSYR  235 (356)
T ss_dssp             ESSG--------GGHHHHHHH
T ss_pred             EECH--------HHHhhHHHH
Confidence            7632        366665544

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.90  E-value=2.6e-23  Score=189.68  Aligned_cols=189  Identities=16%  Similarity=0.091  Sum_probs=145.9

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC--CcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP--DDVYLTLGCTQAIEVILTVLARPGANIL  138 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~~~G~t~ai~~~~~~l~~~gd~Vl  138 (319)
                      .++++.+.+++.+.+....  .+.......++++.+++++.      .+.  +++++|+|+++++. ++.+++++||+|+
T Consensus        11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~~------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi   81 (384)
T 3zrp_A           11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVMG------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL   81 (384)
T ss_dssp             SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHHT------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred             CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHhC------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence            4678888888876543211  11112345677777777773      344  88999999999999 9999999999999


Q ss_pred             EcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          139 LPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       139 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      ++.|.|..  +...++..|.+++.++.+.  ++.+|++++++.+++ ++++|++++|+||||.+++   +++|.++|+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  156 (384)
T 3zrp_A           82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY  156 (384)
T ss_dssp             EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred             EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence            99999965  6667788999999998864  457899999999987 7899999999999999988   88899999999


Q ss_pred             CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |+++|+|++|.....    +..+   ...+..+++.|+||+++. +.++||+++++
T Consensus       157 ~~~li~D~a~~~~~~----~~~~---~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~  204 (384)
T 3zrp_A          157 VELIVVDGVSSVGAE----EVKA---EEWNVDVYLTASQKALGS-AAGLGLLLLSP  204 (384)
T ss_dssp             EEEEEEECTTTTTTS----CCCT---TTTTCSEEEEETTSTTCC-CSSEEEEEECH
T ss_pred             CCEEEEECcccccCc----cccc---cccCCCEEEecCcccccC-CCceEEEEECH
Confidence            999999999875321    1122   222345999999998742 24499999854

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.90  E-value=1.1e-22  Score=185.20  Aligned_cols=197  Identities=17%  Similarity=0.125  Sum_probs=148.8

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC---------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST---------VGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      |.|+.+..     .++++.+.+++.+.+....  .++..         ....++++.+++++      +.+++++++|+|
T Consensus         2 iyld~~~~-----~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g   68 (382)
T 4hvk_A            2 AYFDYTSA-----KPVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSG   68 (382)
T ss_dssp             CBCBTTTC-----CCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESS
T ss_pred             EeecCCCc-----CCCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECC
Confidence            34555543     3678899999999876521  22211         11235666666665      346788999999


Q ss_pred             HHHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHHh---hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          119 CTQAIEVILTVLA----RPGANILLPRPGFPYYEARAT---HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       119 ~t~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      +++++.++++++.    ++||+|+++.+.|+.+...+.   ..|++++.++.+  .++.+|+++++++++++++++++++
T Consensus        69 ~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~  146 (382)
T 4hvk_A           69 ATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQH  146 (382)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCS
T ss_pred             chHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEEC
Confidence            9999999999987    899999999999998766544   469999999885  3457999999999998899999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |+||||.+++   +++|.++|+++|+ +|+|++|....    .+..+...   +..+++.|+||.++.+|  +|++++++
T Consensus       147 ~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~  213 (382)
T 4hvk_A          147 ANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQ----IEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRK  213 (382)
T ss_dssp             BCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHH---TCSEEEEESGGGTSCTT--CEEEEEET
T ss_pred             CCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhc---CCCEEEEeHHHhcCCCc--eEEEEEcC
Confidence            9999999987   7789999999999 99999987521    11112111   23599999999877666  67777655


Q ss_pred             C
Q 020968          272 P  272 (319)
Q Consensus       272 ~  272 (319)
                      +
T Consensus       214 ~  214 (382)
T 4hvk_A          214 E  214 (382)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.90  E-value=1.9e-22  Score=185.32  Aligned_cols=187  Identities=18%  Similarity=0.161  Sum_probs=149.5

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHF  161 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~  161 (319)
                      .+...++++.+++++.        .++.++++++++|+..++.+++++||+|+++.|.|.++...    ++..|.++..+
T Consensus        58 ~~~~~~l~~~la~~~g--------~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v  129 (389)
T 3acz_A           58 NPTVEQFEEMVCSIEG--------AAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI  129 (389)
T ss_dssp             CHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             ChHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE
Confidence            3456789999999982        23677777888999999999999999999999999876554    57889999888


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      +.       .|++++++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+..    ++.  
T Consensus       130 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~----~~~--  193 (389)
T 3acz_A          130 DT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK----PLE--  193 (389)
T ss_dssp             CT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GGG--
T ss_pred             CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC----ccc--
Confidence            75       3899999999888999999999999999986   8999999999999999999999765321    221  


Q ss_pred             CCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                        .+..+++.|+||.++++|.|+ ||+++++       .+++++++.... .....+++.++++..
T Consensus       194 --~~~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~  250 (389)
T 3acz_A          194 --LGADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLCAR  250 (389)
T ss_dssp             --TTCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             --cCCeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence              234699999999999999998 9999854       147777776554 334456666655443

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.90  E-value=1.4e-22  Score=188.27  Aligned_cols=243  Identities=16%  Similarity=0.141  Sum_probs=161.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC---CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +..+++++.+.+..... ..++.+.+++.+++.....   ..|+. ....++++.+++++      +.+.++|++|+|++
T Consensus        42 g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~ggt  113 (429)
T 1s0a_A           42 GRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSGS  113 (429)
T ss_dssp             SCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSHH
T ss_pred             CCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCHH
Confidence            45678988887532211 2579999999998865321   12322 22345666666555      24678999999999


Q ss_pred             HHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHh-hCC-------------CeEEEEeccC---CCCC-cCCHHH
Q 020968          121 QAIEVILTVLA---R----PGANILLPRPGFPYYEARAT-HSH-------------LEVRHFDLLP---AKGW-EVDLDA  175 (319)
Q Consensus       121 ~ai~~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~---~~~~-~~d~~~  175 (319)
                      +|++.+++.+.   +    +|++|++..|+|+.+...+. ..|             .++..++...   ...+ .+|+++
T Consensus       114 ea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  193 (429)
T 1s0a_A          114 VAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVG  193 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHH
T ss_pred             HHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHH
Confidence            99999988653   2    58999999999987544332 211             1344444421   1123 479999


Q ss_pred             HHhhhcc--CceEEEEcCC--CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          176 VEALADE--NTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       176 l~~~l~~--~~~~v~l~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      +++++++  ....+++++|  +||||. +++.+++++|.++|+++|+++|+||+|.++.+.+.. ..+.......+++  
T Consensus       194 l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~~--  270 (429)
T 1s0a_A          194 FARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDIL--  270 (429)
T ss_dssp             HHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE--
T ss_pred             HHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCEE--
Confidence            9998863  2334455666  589995 667888999999999999999999999987654421 1222222222333  


Q ss_pred             ecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH
Q 020968          251 GSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       251 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l  307 (319)
                       |+||.++ +| +|+||+++++        ++++.+...      ...+.+.++++|.++..++
T Consensus       271 -t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal  324 (429)
T 1s0a_A          271 -CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASL  324 (429)
T ss_dssp             -EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHH
T ss_pred             -Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHH
Confidence             7899976 58 9999999853        577777653      1223456788887776654

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.90  E-value=2.4e-23  Score=191.22  Aligned_cols=235  Identities=17%  Similarity=0.141  Sum_probs=161.0

Q ss_pred             CCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +..+++|+.+.+...  +. +++.+.+++.+.+.....  ..| +.....++++.+++++    |  .+.+++++++|++
T Consensus        44 g~~~ld~~~~~~~~~--~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg~  114 (395)
T 1vef_A           44 GNEYIDCVGGYGVAN--LGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSGT  114 (395)
T ss_dssp             SCEEEESSHHHHTCT--TCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSHH
T ss_pred             CCEEEEccCcccccc--CCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcHH
Confidence            455788888753211  33 789999999998865321  123 2333455555555554    3  3678999999999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcc-hHHHHhhCCCe------------EEEEeccCCCCCcCCHHHHHhhhccCce
Q 020968          121 QAIEVILTVLA--RPGANILLPRPGFPY-YEARATHSHLE------------VRHFDLLPAKGWEVDLDAVEALADENTV  185 (319)
Q Consensus       121 ~ai~~~~~~l~--~~gd~Vl~~~p~~~~-~~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~  185 (319)
                      +|+..+++++.  .+|+.|++.+|+|+. +...+...|.+            +..++.       .|+++++++++++++
T Consensus       115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~~~  187 (395)
T 1vef_A          115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEETA  187 (395)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTEE
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-------CcHHHHHHHhccCEE
Confidence            99999998764  578999999999975 44455666665            222221       489999999987788


Q ss_pred             EEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          186 ALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       186 ~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +|+++.++||||.+. +.+++++|.++|+++|+++|+|++|.++.+.+... ++.......+++   |+||+++. |+|+
T Consensus       188 ~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~  262 (395)
T 1vef_A          188 AVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPL  262 (395)
T ss_dssp             EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSC
T ss_pred             EEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCce
Confidence            777666688999765 68889999999999999999999999765444321 112222222333   88999876 8999


Q ss_pred             eEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          265 GWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      ||+++++        +++++++... .....++++.|.++..++
T Consensus       263 G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~al  298 (395)
T 1vef_A          263 GVAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAI  298 (395)
T ss_dssp             EEEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred             EEEEehH--------HHHhhhccCCcCCCcCCCHHHHHHHHHHH
Confidence            9999864        3555554321 123456777777665544

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.90  E-value=9.4e-23  Score=188.87  Aligned_cols=201  Identities=17%  Similarity=0.199  Sum_probs=153.9

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEc
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLP  140 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~  140 (319)
                      +.++.+.+++.+.+.......|++..|..++++.+++.+.+.+|.    +++++++++++|+..++.++ +++||+|+++
T Consensus        13 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~----~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~   88 (418)
T 2c81_A           13 QHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV----PYCVPTTSGSTALMLALEALGIGEGDEVIVP   88 (418)
T ss_dssp             CCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC----SEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC----CcEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence            457999999999887655444777667444444444444333332    25777888899999999999 8999999999


Q ss_pred             CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968          141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI  220 (319)
Q Consensus       141 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  220 (319)
                      .|+|..+...++..|.+++.++.++ +++.+|++++++.+++++++|+++   ||||..   .++++|.++|+++|+++|
T Consensus        89 ~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~---~~~~~i~~~~~~~~~~li  161 (418)
T 2c81_A           89 SLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSM---ANMDEINEIAQEHNLFVI  161 (418)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCC---CCHHHHHHHHHHTTCEEE
T ss_pred             CCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCc---ccHHHHHHHHHHCCCEEE
Confidence            9999999999999999999998854 357899999999998888887765   589987   458999999999999999


Q ss_pred             EeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          221 ADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       221 ~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      +|++|..+. +++...   ..+.    .+.+.||  ||.++. | |+||+++++       ++++++++...
T Consensus       162 ~D~a~~~~~~~~~~~~---~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~  217 (418)
T 2c81_A          162 EDCAQSHGSVWNNQRA---GTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLR  217 (418)
T ss_dssp             EECTTCTTCEETTEET---TSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHH
T ss_pred             EECcccccCccCCEec---cccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHH
Confidence            999999876 544221   1221    2777777  999877 8 999999854       24677776543

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.90  E-value=9.5e-24  Score=194.00  Aligned_cols=202  Identities=17%  Similarity=0.139  Sum_probs=151.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC---CCCCC----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      ..+.|.|+.+.+.     ++++.+.+++.+.+.....   ..|..    .....++++++++++      +++++++++|
T Consensus        18 ~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~   86 (400)
T 3vax_A           18 GSHMTYLDAAATT-----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIFT   86 (400)
T ss_dssp             ----CCCCCCCCS-----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEEE
T ss_pred             cCCcEEecCCCCC-----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEEe
Confidence            4567888877654     6789999999888753211   01111    122456666666665      3467899999


Q ss_pred             CCHHHHHHHHHHHhc----CCCC-EEEEcCCCCcchHHHHh---hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968          117 LGCTQAIEVILTVLA----RPGA-NILLPRPGFPYYEARAT---HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~----~~gd-~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      +|+++|+..+++++.    ++|| +|+++.+.|+.+...+.   ..|++++.++.+.  ++.+|++++++++++++++++
T Consensus        87 ~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~  164 (400)
T 3vax_A           87 SGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVS  164 (400)
T ss_dssp             SCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEE
Confidence            999999999999997    8999 99999999988765544   3699999998754  567899999999998899999


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +++|+||||.+++   +++|.++|+++|+++|+|++|+...    ....+...    ..+++.|+||.++.+|  +|+++
T Consensus       165 ~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~  231 (400)
T 3vax_A          165 LMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALV  231 (400)
T ss_dssp             CCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEE
T ss_pred             EECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEE
Confidence            9999999999987   7899999999999999999998522    11222222    3489999999876555  66666


Q ss_pred             -eeC
Q 020968          269 -TSD  271 (319)
Q Consensus       269 -~~~  271 (319)
                       +++
T Consensus       232 ~~~~  235 (400)
T 3vax_A          232 TRRR  235 (400)
T ss_dssp             ECBC
T ss_pred             Eecc
Confidence             655

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.90  E-value=2.4e-23  Score=187.65  Aligned_cols=188  Identities=18%  Similarity=0.122  Sum_probs=145.1

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCC-CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL  139 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~  139 (319)
                      .++++.+.+++.+.+..   ..|+ ...+..++|+++++++.    ...+++++++|+|+++|+..+++++.+  |+|++
T Consensus         9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~   79 (353)
T 2yrr_A            9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV   79 (353)
T ss_dssp             CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred             CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence            47789999988776543   1232 12346788888888873    223467899999999999999999876  89999


Q ss_pred             cCCCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968          140 PRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG  216 (319)
Q Consensus       140 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~  216 (319)
                      +.+.|+.+  ...++..|.+++.++.++  ++.+|++++++.+++ ++++|++++|+||||.+++   +++|.++|+++|
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~  154 (353)
T 2yrr_A           80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG  154 (353)
T ss_dssp             EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred             EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence            99999874  456678899999999853  457999999999987 7899999999999999987   779999999999


Q ss_pred             CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEeeC
Q 020968          217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSD  271 (319)
Q Consensus       217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~  271 (319)
                      +++|+|++|+...    .+..+..+.   ..+++.|++|++ +.+|  +||+++++
T Consensus       155 ~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~  201 (353)
T 2yrr_A          155 ALFFLDAVTTLGM----LPFSMRAMG---VDYAFTGSQKCLSAPPG--LAPIAASL  201 (353)
T ss_dssp             CEEEEECTTTTTT----SCCCHHHHT---CSEEECCTTSTTCCCSS--CEEEEECH
T ss_pred             CeEEEEcCccccc----ccccccccC---ceEEEecCcccccCCCc--eEEEEECH
Confidence            9999999996321    122232222   248889999964 3456  79999864

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.9e-22  Score=186.68  Aligned_cols=158  Identities=16%  Similarity=0.105  Sum_probs=130.9

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh----hCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT----HSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~  163 (319)
                      ...+|++.+++++        ..+++++++|+++|+..++++++++||+|+++.|+|..+...+.    ..|.+++.++.
T Consensus        82 ~~~~l~~~la~~~--------g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~  153 (414)
T 3ndn_A           82 TVSVFEERLRLIE--------GAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG  153 (414)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence            3456666666665        24688999999999999999999999999999999998776664    48999998886


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                      +       |++++++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|......    .++ ..  
T Consensus       154 ~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~--  216 (414)
T 3ndn_A          154 D-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PL--  216 (414)
T ss_dssp             T-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GG--
T ss_pred             C-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hc--
Confidence            3       899999999989999999999999999965   889999999999999999999853321    111 11  


Q ss_pred             CCCeEEEecCccccCCCc-ceeeEEEeeC
Q 020968          244 IVPVLTLGSISKRWIVPG-WRLGWLVTSD  271 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G-~r~G~i~~~~  271 (319)
                       ...+++.|+||.++.+| +++|++++++
T Consensus       217 -g~div~~S~sK~l~~~G~~~~G~vv~~~  244 (414)
T 3ndn_A          217 -GVDVVVYSGTKHIDGQGRVLGGAILGDR  244 (414)
T ss_dssp             -TCSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred             -CCCeEeccCCccccCCCCceEEEEEECH
Confidence             23489999999999888 8999999854

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.90  E-value=1.6e-22  Score=185.51  Aligned_cols=203  Identities=15%  Similarity=0.160  Sum_probs=161.0

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      ++|+|+.  |.      .++.+.+++.+.+...   .|.+..+..++|+++++++.        .+++++++|+++|+..
T Consensus         9 ~~i~~~~--p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~   69 (393)
T 1mdo_A            9 DFLPFSR--PA------MGAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI   69 (393)
T ss_dssp             CCBCSCC--CC------CCHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred             cccccCC--CC------CCHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence            4677775  32      3467888998887654   24455678999999999993        3489999999999999


Q ss_pred             HHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          126 ILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       126 ~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      +++++ +++||+|+++.|+|..+...++..|++++.++.++ +++.+|++++++.+++++++|+++   ||||.+.+   
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---  142 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---  142 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---
Confidence            99999 89999999999999999999999999999999864 356799999999998778888765   48999865   


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          205 LQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      +++|.++|+++|+++|+|++|+. ..+.+.+   +   ..  +++++.|+||...++|.|+||+++++       +++++
T Consensus       143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~  207 (393)
T 1mdo_A          143 LDAIYALGERYGIPVIEDAAHATGTSYKGRH---I---GA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD  207 (393)
T ss_dssp             HHHHHHHHHHHTCCBCEECTTCTTCEETTEE---T---TS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECccccCCeECCee---c---CC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence            89999999999999999999996 3343321   1   11  46999999944445667999999864       24777


Q ss_pred             HHHHhh
Q 020968          284 SIKSFL  289 (319)
Q Consensus       284 ~~~~~~  289 (319)
                      +++...
T Consensus       208 ~l~~~~  213 (393)
T 1mdo_A          208 KLRSLK  213 (393)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
Confidence            776543

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.89  E-value=3.7e-22  Score=183.19  Aligned_cols=209  Identities=19%  Similarity=0.234  Sum_probs=157.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC-CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +-+++++|+.+.|.      .++.+.+++.+.+...   .|. +..+..++|+++++++.        .+++++++|+++
T Consensus        20 ~~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~   82 (391)
T 3dr4_A           20 HMSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTT   82 (391)
T ss_dssp             --------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHH
T ss_pred             hcCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHH
Confidence            34678999999975      2467888888777653   355 56788999999999993        338899999999


Q ss_pred             HHHHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968          122 AIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       122 ai~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  200 (319)
                      |+..++.++ .++||+|+++.|+|..+...++..|.+++.++.++ +++.+|++.+++.+++++++|+   ++||||...
T Consensus        83 al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~  158 (391)
T 3dr4_A           83 ALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC  158 (391)
T ss_dssp             HHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC
T ss_pred             HHHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh
Confidence            999999999 89999999999999999999999999999999864 4578999999999988777766   567999985


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCc-cCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHL-AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~-~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                      +   +++|.++|+++|+++|+|++|... .+.+..   ...+.    .+.+.||||..+++|.+.|+++++++       
T Consensus       159 ~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----di~~~S~s~~K~l~~g~gg~~~~~~~-------  221 (391)
T 3dr4_A          159 D---MDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG----DCATFSFFGNAIITTGEGGMITTNDD-------  221 (391)
T ss_dssp             C---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECBTTSSSCCBSCEEEEESCH-------
T ss_pred             h---HHHHHHHHHHcCCEEEEECcccccceECCee---ecccC----CEEEEECCCCCcCCcCCeEEEEECCH-------
Confidence            5   888999999999999999999863 232221   11111    27777877333345567899988652       


Q ss_pred             HHHHHHHHhh
Q 020968          280 GIVDSIKSFL  289 (319)
Q Consensus       280 ~~~~~~~~~~  289 (319)
                      .+.++++...
T Consensus       222 ~~~~~~~~~~  231 (391)
T 3dr4_A          222 DLAAKMRLLR  231 (391)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            4666666554

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.89  E-value=3.8e-23  Score=194.10  Aligned_cols=245  Identities=15%  Similarity=0.137  Sum_probs=170.3

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC--CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP--SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +++.+.++.+..+..+..+ ++. .+.++++|..|.+  +....... +.+.+++.+.+.... ..|++..+..+||+++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~-~~~-~g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~l   85 (467)
T 1ax4_A           10 RIKMVEKIRVPSREEREAA-LKE-AGYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKA   85 (467)
T ss_dssp             EEEEEEECCCCCHHHHHHH-HHH-TTSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHH
T ss_pred             hhceeecccccchhHHHHH-HHh-cCcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhcc-cccccCccHHHHHHHH
Confidence            4555666655544433322 222 3566777777654  11111222 566666666655433 3687777889999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----CCCE---EEEcCCCCcchHHHHhhCCCeEEEEeccC---C
Q 020968           97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----PGAN---ILLPRPGFPYYEARATHSHLEVRHFDLLP---A  166 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~----~gd~---Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---~  166 (319)
                      ++++        ..+++++|+|+++|+..+++++++    +||+   |+++.+.|..+...+...|.+++.++...   .
T Consensus        86 a~~~--------~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  157 (467)
T 1ax4_A           86 KELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDS  157 (467)
T ss_dssp             HHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCT
T ss_pred             HHHc--------CCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccc
Confidence            9999        236899999999999999999988    9998   88887777777778888899887765431   1


Q ss_pred             -----CCCcCCHHHHHhhhcc----CceEEEEcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCC--c------
Q 020968          167 -----KGWEVDLDAVEALADE----NTVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH--L------  228 (319)
Q Consensus       167 -----~~~~~d~~~l~~~l~~----~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~--~------  228 (319)
                           .++.+|+++|++++++    ++++|++++|+||+ |.+++.+++++|+++|++||+++|+|+++..  .      
T Consensus       158 ~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~  237 (467)
T 1ax4_A          158 ETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKAR  237 (467)
T ss_dssp             TSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHH
T ss_pred             cccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhcccc
Confidence                 1346899999999874    57899999999999 8999999999999999999999999998653  1      


Q ss_pred             --cCCCCCCCCCcccC----CCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHh
Q 020968          229 --AFGNTPFVPMGVFG----SIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       229 --~~~~~~~~~~~~~~----~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~  288 (319)
                        .+.+.   ++..+.    ... .+++.|+||.++++ |   ||++++++      .++++++...
T Consensus       238 ~~~~~~~---~~~~~~~~~~~~~-d~~~~s~sK~~g~~~G---g~~~~~d~------~~l~~~~~~~  291 (467)
T 1ax4_A          238 DPKYKNA---TIKEVIFDMYKYA-DALTMSAKKDPLLNIG---GLVAIRDN------EEIFTLARQR  291 (467)
T ss_dssp             CGGGTTC---CHHHHHHHHGGGC-SEEEEETTSTTCCSSC---EEEEESSC------HHHHHHHHHH
T ss_pred             ccccCCC---chhhhhhhhcccc-ceEEEeccccCCCCcc---eEEEeCCH------HHHHHHHHhh
Confidence              12221   111111    011 15668999998776 4   66666533      0366665544

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.89  E-value=1.2e-22  Score=185.14  Aligned_cols=205  Identities=15%  Similarity=0.164  Sum_probs=162.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++++|+.+.|.      ..+ +.+++.+.+...   .|.+..+..++|+++++++.        .+++++++|+++|+
T Consensus         5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~   66 (374)
T 3uwc_A            5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL   66 (374)
T ss_dssp             CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred             cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence            3567888888865      234 888888777653   46677788999999999983        34899999999999


Q ss_pred             HHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          124 EVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       124 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      ..++.++ .++||+|+++.|+|..+...++..|.+++.++.+  .++.+|++++++.+++++++|+   |+||||.+.+ 
T Consensus        67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~-  140 (374)
T 3uwc_A           67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD-  140 (374)
T ss_dssp             HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred             HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence            9999999 8999999999999999999999999999999886  5678999999999988777666   8999999865 


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccch
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDS  279 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~  279 (319)
                        +++|.++|+++|+++|+|++|..+. +++....   .+    ..+++.|+|  |.++.+|. .|++++++       +
T Consensus       141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~---~~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~  203 (374)
T 3uwc_A          141 --MPALAKIAKKHNLHIVEDACQTILGRINDKFVG---SW----GQFACFSLHPLKNLNVWSD-AGVIITHS-------D  203 (374)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTCTTCEETTEETT---SS----SSEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred             --HHHHHHHHHHcCCEEEEeCCCccCceeCCeecc---cc----ccEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence              8899999999999999999998643 2222111   11    137788866  99766565 88888765       2


Q ss_pred             HHHHHHHHhh
Q 020968          280 GIVDSIKSFL  289 (319)
Q Consensus       280 ~~~~~~~~~~  289 (319)
                      ++.++++...
T Consensus       204 ~~~~~~~~~~  213 (374)
T 3uwc_A          204 EYAEKLRLYR  213 (374)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHH
Confidence            4666666554

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.89  E-value=4.3e-22  Score=183.15  Aligned_cols=187  Identities=21%  Similarity=0.197  Sum_probs=150.1

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHF  161 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~  161 (319)
                      .+...++++.+++++        ..+++++++|+++|++.++.+++++||+|+++.|.|.++...+    +..|.++..+
T Consensus        65 ~~~~~~l~~~la~~~--------g~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v  136 (392)
T 3qhx_A           65 NPTRTALEAALAAVE--------DAAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV  136 (392)
T ss_dssp             CHHHHHHHHHHHHHT--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred             ChHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence            345678888888887        2347999999999999999999999999999999998776655    6789999888


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      +.+       |++++++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|.......    ++ ..
T Consensus       137 ~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~----~~-~~  201 (392)
T 3qhx_A          137 ALA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ----PL-SL  201 (392)
T ss_dssp             CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GG-GG
T ss_pred             CCC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC----hH-Hh
Confidence            762       899999999989999999999999999966   9999999999999999999998643211    11 11


Q ss_pred             CCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                         ...+++.|+||.++.+| +|+||+++++       +++.++++.... .....+++.+.++..
T Consensus       202 ---~~di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~  257 (392)
T 3qhx_A          202 ---GADVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLTMR  257 (392)
T ss_dssp             ---TCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             ---CCcEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence               33599999999998887 8999999864       247777776654 345567777666554

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.89  E-value=3.7e-22  Score=183.90  Aligned_cols=187  Identities=23%  Similarity=0.199  Sum_probs=146.2

Q ss_pred             CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEE
Q 020968           85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRH  160 (319)
Q Consensus        85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~  160 (319)
                      +.+...++++.+++++.        .++.++++++++|+..++.+++++||+|+++.|.|.++...+    ...|.++..
T Consensus        63 ~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~  134 (398)
T 1gc0_A           63 SNPTLNLLEARMASLEG--------GEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH  134 (398)
T ss_dssp             CCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred             CChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence            34566788888988882        235666667789999999999999999999999999877665    677888888


Q ss_pred             EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      ++.       .|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+..    ++ .
T Consensus       135 ~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~  199 (398)
T 1gc0_A          135 VDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E  199 (398)
T ss_dssp             ECT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G
T ss_pred             ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h
Confidence            875       2899999999888999999999999999976   8999999999999999999999765421    12 1


Q ss_pred             cCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHH-HHHHhhhh--cCCcchHHHHHHHH
Q 020968          241 FGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVD-SIKSFLNI--SSDPATFIQFLKSS  305 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~q~~~~~  305 (319)
                         .+..+++.|+||.++++|.|+ ||+++++        +.+. .++.....  ....+++.+.++..
T Consensus       200 ---~~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (398)
T 1gc0_A          200 ---LGADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMR  257 (398)
T ss_dssp             ---GTCSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHH
T ss_pred             ---hCceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHh
Confidence               234599999999999999998 9988753        3343 45544332  33456777766544

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.89  E-value=1.9e-22  Score=187.15  Aligned_cols=236  Identities=16%  Similarity=0.126  Sum_probs=162.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||+.|.......+ .+|.+.+++.+++.....  ++. .+..++++.+++.+.+..|    .+++++++|+++|+
T Consensus        56 g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA~  127 (420)
T 2pb2_A           56 GKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLWH--TSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEAN  127 (420)
T ss_dssp             CCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCCC--CCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHHH
T ss_pred             CCEEEEccccccccccCC-CCHHHHHHHHHHHHhccc--ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHHH
Confidence            556788887731111112 578999999998865321  211 1233555666666655443    57999999999999


Q ss_pred             HHHHHHhcC-------CC-CEEEEcCCCCcchH-HHHhhCCCe------------EEEEeccCCCCCcCCHHHHHhhhcc
Q 020968          124 EVILTVLAR-------PG-ANILLPRPGFPYYE-ARATHSHLE------------VRHFDLLPAKGWEVDLDAVEALADE  182 (319)
Q Consensus       124 ~~~~~~l~~-------~g-d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~  182 (319)
                      ..+++.+..       +| ++|++.+|+|+.+. ......|.+            +..++.       .|++++++++++
T Consensus       128 ~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~  200 (420)
T 2pb2_A          128 ETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDD  200 (420)
T ss_dssp             HHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCT
T ss_pred             HHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhcc
Confidence            999998865       67 59999999997754 334444543            333432       389999999988


Q ss_pred             CceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968          183 NTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       183 ~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G  261 (319)
                      ++++|+++.++|++| .+++.+++++|.++|+++|+++|+||+|.++.+.+... .+..+....+++   |+||.++ +|
T Consensus       201 ~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~G  275 (420)
T 2pb2_A          201 HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-GG  275 (420)
T ss_dssp             TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-TT
T ss_pred             CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-CC
Confidence            888888888888888 46899999999999999999999999998876655322 111222223344   7899987 89


Q ss_pred             ceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHHH
Q 020968          262 WRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l  307 (319)
                      +|+||+++++        ++++.++.. .......++++|.++..++
T Consensus       276 ~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L  314 (420)
T 2pb2_A          276 FPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAF  314 (420)
T ss_dssp             SCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHH
T ss_pred             CceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHH
Confidence            9999999853        355544432 1223456788887766644

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.89  E-value=8e-23  Score=186.14  Aligned_cols=196  Identities=18%  Similarity=0.227  Sum_probs=157.2

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEc
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLP  140 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~  140 (319)
                      +.++.+.+++.+.+...   .|.+..+..++|+.+++++.        .+++++++|+++|+..++.++ .++||+|+++
T Consensus        13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~   81 (367)
T 3nyt_A           13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITP   81 (367)
T ss_dssp             HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEEC
Confidence            45678888888877653   45566788999999999993        348999999999999999999 8899999999


Q ss_pred             CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968          141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI  220 (319)
Q Consensus       141 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  220 (319)
                      .++|..+...++..|.+++.++++++ .+.+|++++++++++++++|+   |+||+|...   ++++|.++|+++|+++|
T Consensus        82 ~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~---~~~~i~~la~~~~~~li  154 (367)
T 3nyt_A           82 GFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCA---DFDAINAIASKYGIPVI  154 (367)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHTTCCBE
T ss_pred             CCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChh---hHHHHHHHHHHcCCEEE
Confidence            99999999999999999999998643 478999999999988777766   788999874   48999999999999999


Q ss_pred             EeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          221 ADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       221 ~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      +|++|.. ..+++.....   +.    .+++.||  +|.++.+|. .|++++++       +++.++++....
T Consensus       155 ~D~a~~~g~~~~~~~~~~---~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~  212 (367)
T 3nyt_A          155 EDAAQSFGASYKGKRSCN---LS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIAR  212 (367)
T ss_dssp             EECTTTTTCEETTEETTS---SS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTB
T ss_pred             EECccccCCeECCeeccC---CC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHh
Confidence            9999985 3333322211   22    3888887  899877677 88988865       357777776543

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.89  E-value=3.3e-22  Score=183.37  Aligned_cols=187  Identities=22%  Similarity=0.270  Sum_probs=147.6

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHF  161 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~  161 (319)
                      ..+..++++++++++..      + +.+++++| ++|+..+++++.++||+|+++.|.|.+...    .++..|.++..+
T Consensus        51 ~~~~~~l~~~la~~~~~------~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~  122 (386)
T 1cs1_A           51 NPTRDVVQRALAELEGG------A-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV  122 (386)
T ss_dssp             CHHHHHHHHHHHHHHTC------S-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             CccHHHHHHHHHHHhCC------C-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEe
Confidence            45678999999999832      2 55666555 999999999999999999999999987443    346778888888


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      +.       .|++.+++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+..    ++ . 
T Consensus       123 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~-  186 (386)
T 1cs1_A          123 DQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL-A-  186 (386)
T ss_dssp             CT-------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-G-
T ss_pred             CC-------CCHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc-c-
Confidence            75       2899999999888999999999999999986   8999999999999999999999876431    12 1 


Q ss_pred             CCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                        .++.+++.|+||+++.+|.|+ ||+++++       ++++++++..... ....+++.+.++..
T Consensus       187 --~~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~  243 (386)
T 1cs1_A          187 --LGADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLR  243 (386)
T ss_dssp             --GTCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHH
T ss_pred             --cCceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence              245699999999999999997 9999864       2477777765543 33456777665433

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.89  E-value=2.7e-22  Score=184.88  Aligned_cols=208  Identities=13%  Similarity=0.091  Sum_probs=155.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCc-EEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDD-VYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~-i~~~~G~t  120 (319)
                      .+..+.|+.|-      .++++.+.+++.+..    ...|.+.  ....++++.+++++.      .+.++ +++++|++
T Consensus        11 ~~~~~~~~pgp------~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~sgt   74 (411)
T 3nnk_A           11 PPSRLLMGPGP------INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVFR------TENRWTMLVDGTSR   74 (411)
T ss_dssp             CCCCEEESSSC------CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHHT------CCCSEEEEEESCHH
T ss_pred             CccceeecCCC------CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHhC------CCCCcEEEECCCcH
Confidence            44555666554      467888888887543    1223221  223566666776662      34444 78899999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCG  197 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG  197 (319)
                      +|+..++.+++++||+|+++.|+|.+  +...++..|.+++.++.+  .++.+|++++++++++ ++++|++++|+||||
T Consensus        75 ~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG  152 (411)
T 3nnk_A           75 AGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTT  152 (411)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcc
Confidence            99999999999999999999999977  888889999999999974  4567899999999986 899999999999999


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCcc
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ  277 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  277 (319)
                      .+.+   +++|.++|+++|+++|+|++++...    .+..+   ...+..+++.|++|+++ ++.++||+++++      
T Consensus       153 ~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~---~~~~~d~~~~s~~K~l~-~~~g~g~~~~~~------  215 (411)
T 3nnk_A          153 MLQP---LAELGEICRRYDALFYTDATASLGG----NPLET---DVWGLDAVSAGMQKCLG-GPSGTSPITLSA------  215 (411)
T ss_dssp             EECC---CTTHHHHHHHHTCEEEEECTTTBTT----BCCCT---TTTTCSEEECCSTTTTC-CCSSEEEEEECH------
T ss_pred             eecc---HHHHHHHHHHcCCEEEEECCcccCC----cccch---hccCCcEEEecCccccC-CCCceEEEEECH------
Confidence            9977   8899999999999999999987521    11112   22234599999999843 334689999853      


Q ss_pred             chHHHHHHHHh
Q 020968          278 DSGIVDSIKSF  288 (319)
Q Consensus       278 ~~~~~~~~~~~  288 (319)
                        +++++++..
T Consensus       216 --~~~~~~~~~  224 (411)
T 3nnk_A          216 --RMEEAIRRR  224 (411)
T ss_dssp             --HHHHHHHTT
T ss_pred             --HHHHHHhhc
Confidence              566666653

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.89  E-value=8.8e-23  Score=184.86  Aligned_cols=199  Identities=13%  Similarity=0.145  Sum_probs=152.1

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ++++|+.| |.     .+++.+.+++.+.+.    +.|+.  ..+..++|+++++++..    ..+++++++|+|+++|+
T Consensus         4 ~~~~~~~g-p~-----~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~~~g~t~a~   69 (366)
T 1m32_A            4 NYLLLTPG-PL-----TTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATA----SEGYTSVLLQGSGSYAV   69 (366)
T ss_dssp             -CEECSSS-SC-----CCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCS----SSSEEEEEEESCHHHHH
T ss_pred             ccccccCC-Cc-----CCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCC----CCcCcEEEEecChHHHH
Confidence            36899999 43     578899988876431    12321  15789999999999831    22335899999999999


Q ss_pred             HHHHHHhcCCCCEEEEcC-CCCcc-hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--CceEEEEcCCCCccccc
Q 020968          124 EVILTVLARPGANILLPR-PGFPY-YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNV  199 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~  199 (319)
                      ..++++++++||+|++.+ +.|.. +...+...|.+++.++.+.  ++.+|++++++++++  ++++|++++|+||||.+
T Consensus        70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~  147 (366)
T 1m32_A           70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML  147 (366)
T ss_dssp             HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred             HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence            999999999999988776 55654 5677788899999998753  456899999998875  47889999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ++   +++|.++|+++|+++|+|++|+....    +..+   ...+..++++|+||+++. +.++||+++++
T Consensus       148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~---~~~~~di~~~s~~K~~~~-~~g~G~~~~~~  208 (366)
T 1m32_A          148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDI---AALHIDYLISSANKCIQG-VPGFAFVIARE  208 (366)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCT---TTTTCSEEEEESSSTTCC-CSSEEEEEEEH
T ss_pred             cC---HHHHHHHHHHcCCEEEEECCccccCc----Cccc---cccCccEEEecCcccccC-CCceEEEEECH
Confidence            88   78999999999999999999985332    1122   222346999999998633 23579999864

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.89  E-value=2.7e-22  Score=186.92  Aligned_cols=244  Identities=15%  Similarity=0.071  Sum_probs=164.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~  121 (319)
                      .+..++||+.+.+.....+ .+|.+.+++.+++...  ..|+...+..++++++++++.+..+.  .. +++++++|+++
T Consensus        41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggse  115 (439)
T 3dxv_A           41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSD  115 (439)
T ss_dssp             TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHH
T ss_pred             CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHH
Confidence            3567899999986422112 6899999999988764  24554556677888888888776543  33 69999999999


Q ss_pred             HHHHHHHHh--cCCCCEEEEcCCCCcchHHHHhhCCCe-E--------------EEEeccCCCCCcC-----CHHHHHhh
Q 020968          122 AIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLE-V--------------RHFDLLPAKGWEV-----DLDAVEAL  179 (319)
Q Consensus       122 ai~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----d~~~l~~~  179 (319)
                      |+..+++.+  ..+++.|++.+|.|+.+...+...+.. .              ..++..  ..+..     |++.|+++
T Consensus       116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~  193 (439)
T 3dxv_A          116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK  193 (439)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence            999999885  236678998899987655444433221 1              112211  11111     68999998


Q ss_pred             h----ccCceEEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          180 A----DENTVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       180 l----~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                      +    .+++++|++..++|++|.+.+ .+.+++|.++|++||+++|+||+|.++...+.. .....+....+++   |+|
T Consensus       194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~s  269 (439)
T 3dxv_A          194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLG  269 (439)
T ss_dssp             HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EEC
T ss_pred             HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEc
Confidence            8    445667777777788887654 444999999999999999999999987555432 2222222222333   899


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      |.++ +|+|+||++++.        ++++.+..... .+. .++++|.++..++
T Consensus       270 K~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal  313 (439)
T 3dxv_A          270 KGLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVL  313 (439)
T ss_dssp             GGGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHH
T ss_pred             chhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHH
Confidence            9997 599999999853        46665554322 234 7788887766644

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.89  E-value=3.8e-22  Score=184.12  Aligned_cols=189  Identities=17%  Similarity=0.186  Sum_probs=146.8

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCe
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLE  157 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~  157 (319)
                      +|+ .++..+||+++++++..      . +.+++++| ++|+..++. ++++||+|+++.|.|.+....    ++..|++
T Consensus        63 r~~-~p~~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~  132 (403)
T 3cog_A           63 RSG-NPTRNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLK  132 (403)
T ss_dssp             ----CHHHHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCE
T ss_pred             CCC-CchHHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCE
Confidence            444 35678999999999832      2 45555555 699999999 889999999999999874443    3578999


Q ss_pred             EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcC-CEEEEeCCCCCccCCCCCCC
Q 020968          158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG-IMVIADEVYDHLAFGNTPFV  236 (319)
Q Consensus       158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~D~a~~~~~~~~~~~~  236 (319)
                      ++.++.+       |++++++++++++++|++++|+||||.+++   +++|+++|+++| +++|+|++|..+.+..    
T Consensus       133 v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~----  198 (403)
T 3cog_A          133 ISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR----  198 (403)
T ss_dssp             EEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC----
T ss_pred             EEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC----
Confidence            9888763       899999999888999999999999999987   899999999999 9999999999865421    


Q ss_pred             CCcccCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          237 PMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       237 ~~~~~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                      ++.    .+..++++|+||.++++| .|+||+++++       ++++++++.... .....+++.|.++..
T Consensus       199 ~~~----~~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~~~  258 (403)
T 3cog_A          199 PLA----LGADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLCNR  258 (403)
T ss_dssp             TTT----TTCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             ccc----cCCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence            221    245699999999999876 4799999854       357777776654 344567777776554

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.89  E-value=2.5e-22  Score=180.08  Aligned_cols=182  Identities=16%  Similarity=0.120  Sum_probs=144.2

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEeccCC
Q 020968           91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPA  166 (319)
Q Consensus        91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~  166 (319)
                      ++|+.+++++.      .+  +.++++++++|+..++.++.++||+|+++.|+|..+...+    +..|.++..++.   
T Consensus         2 ~l~~~la~~~g------~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---   70 (331)
T 1pff_A            2 ALEGKIAKLEH------AE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             hHHHHHHHHhC------CC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence            68999999983      23  4555555589999999999999999999999999876654    458999888875   


Q ss_pred             CCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH-cCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       167 ~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                          .|++++++.+++++++|++++|+||||.+++   +++|.++|++ +|+++|+|++|....+.    .++    ..+
T Consensus        71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~----~~~  135 (331)
T 1pff_A           71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL----DLG  135 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG----GGT
T ss_pred             ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh----hcC
Confidence                4788999999888999999999999999986   8999999999 99999999999975542    122    124


Q ss_pred             CeEEEecCccccCCCcce-eeEEEeeCCCCCccchHHHHHHHHhhhh--cCCcchHHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQFLKSS  305 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~  305 (319)
                      +++++.|+||.+++||.| +||+++++       ++++++++.....  ....+++.|.++..
T Consensus       136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (331)
T 1pff_A          136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITR  191 (331)
T ss_dssp             CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHH
T ss_pred             CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHc
Confidence            569999999999999999 79998853       1477777765543  33567777765433

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.89  E-value=3e-22  Score=184.05  Aligned_cols=237  Identities=14%  Similarity=0.100  Sum_probs=162.2

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||+.+.+..... ..+|.+.+++.+++..... .|  ..+..++++++++++.+..|    .+++++++|+++|
T Consensus        34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea  105 (395)
T 3nx3_A           34 KAKKYLDFSSGIGVCALG-YNHAKFNAKIKAQVDKLLH-TS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES  105 (395)
T ss_dssp             TCCEEEESSHHHHTCTTC-BSCHHHHHHHHHHHTTCSC-CC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred             CCCEEEECCCcHHhccCC-CCCHHHHHHHHHHHHhccc-cc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            366789999885331111 2579999999998865321 12  11233445555555544333    6799999999999


Q ss_pred             HHHHHHHhc-------CCCCEEEEcCCCCcchHHHHhhCC-------------CeEEEEeccCCCCCcCCHHHHHhhhcc
Q 020968          123 IEVILTVLA-------RPGANILLPRPGFPYYEARATHSH-------------LEVRHFDLLPAKGWEVDLDAVEALADE  182 (319)
Q Consensus       123 i~~~~~~l~-------~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d~~~l~~~l~~  182 (319)
                      +..+++.+.       .++++|++..|+|+++...+...+             .++..++.       .|++++++++++
T Consensus       106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~  178 (395)
T 3nx3_A          106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE  178 (395)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT
T ss_pred             HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC
Confidence            999998775       357999999999987654433322             23343332       289999999988


Q ss_pred             CceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968          183 NTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       183 ~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G  261 (319)
                      +++++++..++|++|.+ ++.+.+++|.++|+++|+++|+||+|.++...+... ....+...   ..+.++||.++. |
T Consensus       179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~---~d~~t~sK~~~~-G  253 (395)
T 3nx3_A          179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQIL---PDIMTSAKALGC-G  253 (395)
T ss_dssp             TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCC---CSEEEECGGGTT-T
T ss_pred             CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCC---CCEEEecccccC-C
Confidence            88888887777777765 788889999999999999999999999876544321 12222221   223478999875 9


Q ss_pred             ceeeEEEeeCCCCCccchHH-HHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          262 WRLGWLVTSDPNGILQDSGI-VDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       262 ~r~G~i~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      +|+||+++++        ++ ++.++.... .....++++|.++..++
T Consensus       254 ~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal  293 (395)
T 3nx3_A          254 LSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVF  293 (395)
T ss_dssp             SCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHH
T ss_pred             CceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHH
Confidence            9999999853        45 566654322 34466888888776654

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.89  E-value=7.9e-22  Score=179.70  Aligned_cols=208  Identities=13%  Similarity=0.107  Sum_probs=152.0

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      ...+|+.|.      .++++.+.+++.+.+..    .|.+  ...++.+.+++++.+.+|...+.+.+++++|+++++..
T Consensus        19 ~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~   86 (376)
T 3f0h_A           19 GMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEA   86 (376)
T ss_dssp             SCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHH
T ss_pred             CceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHH
Confidence            355666664      47789999888765421    2322  23345555555555544543233455669999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          126 ILTVLARPGANILLPRPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       126 ~~~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ++++++++||+|+++.|.|.++.  ..+...|.++..++.+  .++.+|++++++.++++++++++++|+||||.+++  
T Consensus        87 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~--  162 (376)
T 3f0h_A           87 VVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD--  162 (376)
T ss_dssp             HHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC--
T ss_pred             HHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC--
Confidence            99999999999999998776643  4567789999988875  34679999999988888999999999999999988  


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC-CCcceeeEEEeeCCCCCccchHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                       +++|.++|+++|+++|+|+++..+...    ..+...   +..+++.|+||+++ .+|  +|++++++        +++
T Consensus       163 -l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~  224 (376)
T 3f0h_A          163 -TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNEC---GADVMITGSQKVLACPPG--ISVIVLAP--------RGV  224 (376)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHH---TCSEEEEETTTTTCCCSS--CEEEEECH--------HHH
T ss_pred             -HHHHHHHHHHcCCEEEEEcCccccCcc----cccccc---CccEEEecCcccccCCCc--eEEEEECH--------HHH
Confidence             999999999999999999998864321    112111   23488999999987 566  57777643        466


Q ss_pred             HHHHH
Q 020968          283 DSIKS  287 (319)
Q Consensus       283 ~~~~~  287 (319)
                      +++..
T Consensus       225 ~~~~~  229 (376)
T 3f0h_A          225 ERVEK  229 (376)
T ss_dssp             HHHHT
T ss_pred             HHhhc
Confidence            66653

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.89  E-value=4.4e-22  Score=188.52  Aligned_cols=205  Identities=15%  Similarity=0.108  Sum_probs=163.0

Q ss_pred             CCcHHHHHHHHHHhhcC---CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC-----C
Q 020968           62 RTASVAVDAIVHSVRSA---RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-----P  133 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~-----~  133 (319)
                      ..++.+.+++.+.+...   ....|...++..++++.+++++.+.+|...+.+++++++|+++++..++.++++     +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~  154 (497)
T 3mc6_A           75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR  154 (497)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence            44577777777776542   223455566778999999999988888766688999999999999999998864     5


Q ss_pred             C---CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHH
Q 020968          134 G---ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE  210 (319)
Q Consensus       134 g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~  210 (319)
                      |   ++|+++.++|..+...++..|++++.++.++ +++.+|++++++++++++++|++++|+||||.+.+   +++|.+
T Consensus       155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~  230 (497)
T 3mc6_A          155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK  230 (497)
T ss_dssp             CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred             CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence            6   8999999999999999999999999999864 36789999999999988999999999999999966   889999


Q ss_pred             HHHHcCCEEEEeCCCCCccCC-----CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          211 TAKKLGIMVIADEVYDHLAFG-----NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       211 ~~~~~~~~li~D~a~~~~~~~-----~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +|+++|+++|+|++|+.+...     +....+...+...+..+++.|++|+ +.++.++||+++++
T Consensus       231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~  295 (497)
T 3mc6_A          231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKY-GFAPKGSSVIMYRN  295 (497)
T ss_dssp             HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTT-TCCCSSCEEEECSS
T ss_pred             HHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhh-cCCCCCceeEEecC
Confidence            999999999999999865321     1111111112222335888899998 57788999999865

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.89  E-value=2.9e-22  Score=184.33  Aligned_cols=181  Identities=20%  Similarity=0.159  Sum_probs=142.2

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  162 (319)
                      ....++|+.+++++..        ++.++++++++|++++++ ++++||+|+++.|.|.+...    .++..|.+++.++
T Consensus        55 ~~~~~lr~~la~~~g~--------~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  125 (393)
T 1n8p_A           55 PNRENLERAVAALENA--------QYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN  125 (393)
T ss_dssp             HHHHHHHHHHHHHTTC--------SEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred             hhHHHHHHHHHHHhCC--------CcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence            4568999999999832        256666667999999999 88999999999999985433    4466788888887


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc----CCEEEEeCCCCCccCCCCCCCCC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL----GIMVIADEVYDHLAFGNTPFVPM  238 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~D~a~~~~~~~~~~~~~~  238 (319)
                      .+       | +++++++++++++|++++|+||||.+++   +++|.++|+++    |+++|+|++|..+.+.  .   .
T Consensus       126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~  189 (393)
T 1n8p_A          126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---P  189 (393)
T ss_dssp             SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---G
T ss_pred             CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C---H
Confidence            63       6 8899999888999999999999999986   89999999999    9999999999987653  1   1


Q ss_pred             cccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHH
Q 020968          239 GVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFL  302 (319)
Q Consensus       239 ~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~  302 (319)
                      ..+   +..+++.|+||.++.+|+|+ ||+++.+       ++++++++.... .....++..+.+
T Consensus       190 ~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~  245 (393)
T 1n8p_A          190 LNF---GADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWL  245 (393)
T ss_dssp             GGG---TCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred             HHc---CCeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHH
Confidence            122   34699999999999999999 9988743       247777776544 233445555544

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.89  E-value=8.5e-22  Score=181.76  Aligned_cols=206  Identities=13%  Similarity=0.109  Sum_probs=151.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEE-EeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVY-LTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~-~~~G~t  120 (319)
                      .+..+.|+.+.      .+.++.+.+++.+.    ....|++  .....++++.+++++    |  .+.++++ +++|++
T Consensus         9 ~~~~~~~~p~p------~~~~~~v~~a~~~~----~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~~~~~~~s~t   72 (416)
T 3isl_A            9 TPLRTIMTPGP------VEVDPRVLRVMSTP----VVGQFDPAFTGIMNETMEMLRELF----Q--TKNRWAYPIDGTSR   72 (416)
T ss_dssp             CCCCEECSSSS------CCCCHHHHHHTTSC----CCCTTSHHHHHHHHHHHHHHHHHT----T--CCCSEEEEEESCHH
T ss_pred             cccceeecCCC------cCcCHHHHHHhccc----CCCCccHHHHHHHHHHHHHHHHHh----C--CCCCcEEEecCcHH
Confidence            34556666554      35667777766542    2223332  123455666666665    3  4566665 889999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccc
Q 020968          121 QAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCG  197 (319)
Q Consensus       121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG  197 (319)
                      +++..++.+++++||+|+++.|+|.+  +...++..|++++.++.+.  ++.+|+++++++++ +++++|++++|+||||
T Consensus        73 ~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG  150 (416)
T 3isl_A           73 AGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTG  150 (416)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCc
Confidence            99999999999999999999999987  7778889999999999864  34789999999997 5889999999999999


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCcc
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ  277 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  277 (319)
                      .+++   +++|.++|+++|+++|+|++|+....    +..+   ...+..+++.|++|++ .++.++|++++++      
T Consensus       151 ~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~---~~~~~d~~~~s~~K~l-~g~~g~g~~~~~~------  213 (416)
T 3isl_A          151 RIHP---LKAIGEACRTEDALFIVDAVATIGGC----EVKV---DEWKIDAAIGGTQKCL-SVPSGMAPITYNE------  213 (416)
T ss_dssp             EECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCCT---TTTTCSEEECCSSSTT-CCCSSEEEEEECH------
T ss_pred             eecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccch---hhcCCCEEEecCcccc-CCCCCeEEEEECH------
Confidence            9987   88999999999999999999874221    1122   1223459999999973 2334589998853      


Q ss_pred             chHHHHHHH
Q 020968          278 DSGIVDSIK  286 (319)
Q Consensus       278 ~~~~~~~~~  286 (319)
                        ++++++.
T Consensus       214 --~~~~~~~  220 (416)
T 3isl_A          214 --RVADVIA  220 (416)
T ss_dssp             --HHHHHHH
T ss_pred             --HHHHHhh
Confidence              4666665

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.88  E-value=1.1e-21  Score=177.43  Aligned_cols=210  Identities=13%  Similarity=0.063  Sum_probs=150.2

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      +.++|+.|.      .++++.+.+++.+.+.......+.......++.+.+.+.+.+.+|.. +++++++|+|+++|+.+
T Consensus         4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~   76 (362)
T 3ffr_A            4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER   76 (362)
T ss_dssp             CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred             cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence            356677664      36678888888777665431111112233355555666665555543 56789999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcc-hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          126 ILTVLARPGANILLPRPGFPY-YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       126 ~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      +++++.++ +.+++..+.|.. +...++..|++++.++.+  .++.+|+++++  +++++++|++++|+||||.+++   
T Consensus        77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---  148 (362)
T 3ffr_A           77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---  148 (362)
T ss_dssp             HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred             HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence            99999877 555566666652 345677889999999874  34678999998  6778999999999999999988   


Q ss_pred             HHHHHHHHHHc-CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC-CCcceeeEEEeeCCCCCccchHHH
Q 020968          205 LQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIV  282 (319)
Q Consensus       205 l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~  282 (319)
                      +++|.++|+++ |+++|+|++|.....    +..+..     ..+++.|+||+++ .+|  +|++++++        +++
T Consensus       149 l~~i~~la~~~p~~~li~D~a~~~~~~----~~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~~--------~~~  209 (362)
T 3ffr_A          149 VEDINTFRDKNKDALIFVDAVSSLPYP----KFDWTK-----IDSVFFSVQKCFGLPAG--LGVWILND--------RVI  209 (362)
T ss_dssp             HHHHTTSGGGSTTSEEEEECTTTTTSS----CCCTTS-----CSEEEEETTSTTCCCSC--CEEEEEEH--------HHH
T ss_pred             HHHHHHHHHhCCCCEEEEecccccCCc----ccChhH-----CcEEEEecccccCCCCc--eEEEEECH--------HHH
Confidence            88899999999 999999999886432    111111     3488999999998 677  46676643        466


Q ss_pred             HHHHHhh
Q 020968          283 DSIKSFL  289 (319)
Q Consensus       283 ~~~~~~~  289 (319)
                      ++++...
T Consensus       210 ~~~~~~~  216 (362)
T 3ffr_A          210 EKSKALL  216 (362)
T ss_dssp             HHHHHHH
T ss_pred             HHhhhcc
Confidence            6666543

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.88  E-value=4e-21  Score=177.78  Aligned_cols=182  Identities=18%  Similarity=0.162  Sum_probs=145.0

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL  138 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl  138 (319)
                      ++.++.+.+++.   ... ...|+..  ....++|+.+++++.        .+++++++|+++|++.++.+++++||+|+
T Consensus        32 ~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi   99 (412)
T 2cb1_A           32 FKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV   99 (412)
T ss_dssp             CSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred             cCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            566677766654   222 2356543  457889999999882        34899999999999999999999999999


Q ss_pred             EcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968          139 LPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK  214 (319)
Q Consensus       139 ~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  214 (319)
                      ++.|.|..+...    ++..|.+++.++.        |++++++++++++++|++++|+||||.+++   +++|.++|++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~  168 (412)
T 2cb1_A          100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE  168 (412)
T ss_dssp             EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred             EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence            999999875544    3457888888874        488999999888999999999999999976   9999999999


Q ss_pred             cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       215 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      +|+++|+|++|..+.+..   .+.    ..+..+++.|+||.+++||.|+|++++.++
T Consensus       169 ~~~~li~D~~~~~~~~~~---~~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~  219 (412)
T 2cb1_A          169 AGVALVVDNTFGAAGALC---RPL----AWGAHVVVESLTKWASGHGSVLGGAVLSRE  219 (412)
T ss_dssp             HTCEEEEECGGGTTTTSC---CGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECC
T ss_pred             cCCEEEEECCCccccccC---Ccc----ccCCeEEEECCcccccCCCCcEEEEEEecc
Confidence            999999999998752111   111    123569999999999999999999988663

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.88  E-value=5.5e-22  Score=181.09  Aligned_cols=202  Identities=13%  Similarity=0.048  Sum_probs=151.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      ++.+.|+.|.      ..+++.+.+++.+....    .|.+.  ....++++++++++....+  ++++++++|+|++++
T Consensus         4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~a   71 (385)
T 2bkw_A            4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLG   71 (385)
T ss_dssp             CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHH
T ss_pred             ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHH
Confidence            4557777774      36678888877654321    23221  1356788888888865322  356899999999999


Q ss_pred             HHHHHHHhc---CCCCEEEEc-CCCCcch-HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCcc
Q 020968          123 IEVILTVLA---RPGANILLP-RPGFPYY-EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPC  196 (319)
Q Consensus       123 i~~~~~~l~---~~gd~Vl~~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~npt  196 (319)
                      +..+++++.   ++||+|+++ .|.|..+ ...++..|.+++.++.. +.++.+|++++++++++ ++++|++++|+|||
T Consensus        72 l~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt  150 (385)
T 2bkw_A           72 WDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTST  150 (385)
T ss_dssp             HHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred             HHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence            999999997   899999887 5566555 36778889999999872 23567999999999876 78999999999999


Q ss_pred             ccccCHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC-CCcceeeEEEeeC
Q 020968          197 GNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSD  271 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G~r~G~i~~~~  271 (319)
                      |.+++   +++|.++|+++  |+++|+|++|....    .+..+.   ..+..+++.|+||+++ .+|  +||+++++
T Consensus       151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~---~~~~d~~~~s~~K~~~~~~G--~G~~~~~~  216 (385)
T 2bkw_A          151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFD---EWGVDFALTASQKAIGAPAG--LSISLCSS  216 (385)
T ss_dssp             TEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTT---TTTCSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred             CeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----cccccc---ccCceEEEecCccccccCCc--ceEEEEcH
Confidence            99987   78999999999  99999999997421    112222   2234589999999654 466  49999854

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.88  E-value=3e-22  Score=186.27  Aligned_cols=245  Identities=15%  Similarity=0.067  Sum_probs=158.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..+.+.....+ .+|.+.+++.+++.....  +. ..+..+++..+++.+.+.++  .+.++|++|+|+++|+
T Consensus        42 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~  115 (433)
T 1zod_A           42 GRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITP--PGLDRALLLSTGAESN  115 (433)
T ss_dssp             CCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHHH
T ss_pred             CCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHH
Confidence            456778877753211112 478999999988865321  11 12223445555555555444  3578999999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC------------CCeEEEEeccCC--CCC--------cCCHHHHHhh
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEARATHS------------HLEVRHFDLLPA--KGW--------EVDLDAVEAL  179 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~------------g~~~~~~~~~~~--~~~--------~~d~~~l~~~  179 (319)
                      ..+++.+.  ..+++|++.+|+|+++...+...            ...+..++....  ..+        .+|++.+++.
T Consensus       116 ~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~  195 (433)
T 1zod_A          116 EAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDL  195 (433)
T ss_dssp             HHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHH
Confidence            99998653  24589999999998754433321            113344433211  111        2368999988


Q ss_pred             hcc---CceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          180 ADE---NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       180 l~~---~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                      +++   +...+++++| +||||. +++.+++++|.++|+++|+++|+||+|.++.+.+.. ..+........   +.|+|
T Consensus       196 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~s~s  271 (433)
T 1zod_A          196 IDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---ILTLS  271 (433)
T ss_dssp             HHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEEC
T ss_pred             HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EEEec
Confidence            863   2334555677 588995 678888999999999999999999999987654431 11121222222   33899


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh--h-hcCCcchHHHHHHHHHH
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL--N-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~q~~~~~~l  307 (319)
                      |.|+. |+|+||+++++        ++++.+....  . .+.+.++++|.++..++
T Consensus       272 K~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal  318 (433)
T 1zod_A          272 KTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVL  318 (433)
T ss_dssp             HHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHH
T ss_pred             ccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence            99976 99999999864        5777776521  1 23456788887766644

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.88  E-value=6.7e-22  Score=188.07  Aligned_cols=198  Identities=15%  Similarity=0.090  Sum_probs=156.3

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHHhcCCC--------C
Q 020968           66 VAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLARPG--------A  135 (319)
Q Consensus        66 ~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~l~~~g--------d  135 (319)
                      .+.+++....... ...|....+..++++.+++++.+.+|...+++++  ++|+|+++++..+++++.++|        |
T Consensus       115 ~~~~~~~~~~~~~-~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d  193 (514)
T 3mad_A          115 FLNEVYALQSQSN-PLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAP  193 (514)
T ss_dssp             HHHHHHHHHTTCC-TTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSC
T ss_pred             HHHHHHHHHhhcC-CcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCC
Confidence            4444444433332 2245445566788888888888877766555788  999999999999999998766        9


Q ss_pred             EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          136 NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       136 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      +|+++.|+|..+...++..|++++.++.+.  ++.+|+++|++++++++++|++++|+||||.+.+   +++|.++|+++
T Consensus       194 ~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~  268 (514)
T 3mad_A          194 EAVVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEH  268 (514)
T ss_dssp             EEEEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHH
T ss_pred             eEEEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHh
Confidence            999999999999999999999999999864  5789999999999988999999999999999976   88999999999


Q ss_pred             CCEEEEeCCCCCccC-----CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          216 GIMVIADEVYDHLAF-----GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       216 ~~~li~D~a~~~~~~-----~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |+++|+|++|+++.+     .+.+...+. ....+..+++.|++|+ +.+|.++|++++.+
T Consensus       269 ~i~livDea~~~~~~~~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~  327 (514)
T 3mad_A          269 GIGCHVDACLGGFILPWAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR  327 (514)
T ss_dssp             TCEEEEECTTTTTTHHHHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS
T ss_pred             CCeEEEecccccccchhHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC
Confidence            999999999998754     122111221 2222345889999999 46778999999865

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.88  E-value=1e-21  Score=180.57  Aligned_cols=193  Identities=18%  Similarity=0.238  Sum_probs=152.0

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcC--CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEc
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVG--ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLP  140 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~  140 (319)
                      ++++.+++.+.+..    .|.+..|  ..++|++++++++        .+++++++|+++|+..++.++ .++||+|+++
T Consensus        11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~   78 (394)
T 1o69_A           11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLAS   78 (394)
T ss_dssp             -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence            45677888777754    2555446  8899999999992        378999999999999999999 8999999999


Q ss_pred             CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968          141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI  217 (319)
Q Consensus       141 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~  217 (319)
                      .|+|..+...++..|.+++.++.+  .++.+|++++++.+++   ++++|++++   |+|..   .++++|.++|+++|+
T Consensus        79 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~~  150 (394)
T 1o69_A           79 SFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKENDI  150 (394)
T ss_dssp             SSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTTC
T ss_pred             CCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcCC
Confidence            999999999999999999999886  4578999999998876   688888885   89977   559999999999999


Q ss_pred             EEEEeCCCC-CccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          218 MVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       218 ~li~D~a~~-~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      ++|+|++|. ++.+.+.....   +.  .  +.+.|+||..+++|.|+||+++++       ++++++++....
T Consensus       151 ~li~Dea~~~g~~~~~~~~~~---~~--~--~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~  210 (394)
T 1o69_A          151 VLIEDAAEALGSFYKNKALGT---FG--E--FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYST  210 (394)
T ss_dssp             EEEEECTTCTTCEETTEETTS---SS--S--EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTB
T ss_pred             EEEEECcCcccceeCCccccc---cc--C--cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHH
Confidence            999999999 55554422111   11  1  555666544456678999999854       247777776543

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.88  E-value=9.9e-22  Score=183.92  Aligned_cols=243  Identities=12%  Similarity=0.060  Sum_probs=160.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..|.+..... ..+|.+.+++.+++.....   ....+..+.+.++++++.+..+  .+.+ |++|+|+++|+
T Consensus        48 g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA~  120 (452)
T 3n5m_A           48 GKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEAN  120 (452)
T ss_dssp             CCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHHH
T ss_pred             CCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHHH
Confidence            56788998884221111 2479999999998876422   1222334555555555555433  2344 99999999999


Q ss_pred             HHHHHHhc-----C---CCCEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcC-C---------
Q 020968          124 EVILTVLA-----R---PGANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEV-D---------  172 (319)
Q Consensus       124 ~~~~~~l~-----~---~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~-d---------  172 (319)
                      ..+++.+.     .   ++++|++..|+|+++...+...+.             ....++......+.. |         
T Consensus       121 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (452)
T 3n5m_A          121 ETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVEC  200 (452)
T ss_dssp             HHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHH
Confidence            99999886     5   789999999999886654443332             122333211111111 1         


Q ss_pred             HHHHHhhhc----cCceEEEEcCC-CCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          173 LDAVEALAD----ENTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       173 ~~~l~~~l~----~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                      +++|+++++    +++++|++..+ +| +|.++ +.+.+++|.++|+++|+++|+||+|.++.+.|... ....+.-...
T Consensus       201 ~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~d  278 (452)
T 3n5m_A          201 VKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKPD  278 (452)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCCC
Confidence            789998886    45566776666 79 99765 87889999999999999999999999886655321 2222222222


Q ss_pred             eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH---h----hhhcCCcchHHHHHHHHHH
Q 020968          247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS---F----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~q~~~~~~l  307 (319)
                         +.+|||.++. | +|+||++++.        ++++.+..   .    ...+.+.++++|.++..++
T Consensus       279 ---i~t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal  335 (452)
T 3n5m_A          279 ---IITMAKGITS-AYLPLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNL  335 (452)
T ss_dssp             ---EEEECGGGGT-TSSCCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHH
T ss_pred             ---EEeecccccC-CCcceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHH
Confidence               3368999866 9 9999999853        46666632   1    1234566888888776644

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.88  E-value=2.9e-22  Score=186.44  Aligned_cols=241  Identities=13%  Similarity=0.070  Sum_probs=156.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..|....... ..+|.+.+++.+++.......|+ .....+|++.+++++      . +.+++++++|+++++
T Consensus        54 g~~ylD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~-~~~~v~~~~sGsea~  124 (434)
T 3l44_A           54 GNKYIDYLAAYGPIITG-HAHPHITKAITTAAENGVLYGTP-TALEVKFAKMLKEAM------P-ALDKVRFVNSGTEAV  124 (434)
T ss_dssp             CCEEEECCGGGTTCSSC-BTCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHC------T-TCSEEEEESSHHHHH
T ss_pred             CCEEEECCCchhccccC-CCCHHHHHHHHHHHHhCcCCCCC-CHHHHHHHHHHHHhC------C-CCCEEEEeCchHHHH
Confidence            56688888876432111 25899999999988764333343 344566777776665      2 578999999999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCC-CeEEEEeccCCCCC------------cCCHHHHHhhhcc--CceE
Q 020968          124 EVILTVLAR--PGANILLPRPGFPYYEARATHSH-LEVRHFDLLPAKGW------------EVDLDAVEALADE--NTVA  186 (319)
Q Consensus       124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~------------~~d~~~l~~~l~~--~~~~  186 (319)
                      ..+++.+..  ++++|++..|+|+.+...+...+ ............++            .-|+++++++++.  ...+
T Consensus       125 ~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~  204 (434)
T 3l44_A          125 MTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVA  204 (434)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEE
T ss_pred             HHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEE
Confidence            999988764  67899999999987554333222 21111111000000            0188999988863  2334


Q ss_pred             EEEcCC-CCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          187 LVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       187 v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +++++| +|++|.+. +.+.+++|.++|+++|+++|+||+|.+| ..+.. .....+.-...   +.++||.++ +|+|+
T Consensus       205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~~i  278 (434)
T 3l44_A          205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG-GAQDLLGVTPD---LTALGKVIG-GGLPI  278 (434)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS-CHHHHHTCCCS---EEEEEGGGG-TTSSC
T ss_pred             EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc-HHHHHcCCCCC---eeehhhhhc-CCcCe
Confidence            455555 55666554 8888999999999999999999999988 44422 11111222122   347899986 89999


Q ss_pred             eEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          265 GWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      ||++++.        ++++.+...    ...+.+.++++|.++..++
T Consensus       279 G~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal  317 (434)
T 3l44_A          279 GAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACL  317 (434)
T ss_dssp             EEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHH
T ss_pred             eeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHH
Confidence            9998743        466666542    2224567888888776644

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.88  E-value=6e-22  Score=182.94  Aligned_cols=215  Identities=16%  Similarity=0.130  Sum_probs=144.6

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      +.++|..+.      ...++.+.+++.+.+.......      |.......++++.+++.+.+.+|  .++++|++++| 
T Consensus        26 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG-   96 (417)
T 3n0l_A           26 EGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG-   96 (417)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-
T ss_pred             cCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-
Confidence            568887665      2348999999988774322112      22223335666644444444443  35667888777 


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHhhCC--CeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCCC
Q 020968          120 TQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSH--LEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPG  193 (319)
Q Consensus       120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~  193 (319)
                      ++|+..++.+++++||+|+++.|+|..+..   .....|  ..++.++.+  .++.+|+++++++++ +++++|++++|+
T Consensus        97 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~  174 (417)
T 3n0l_A           97 SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASA  174 (417)
T ss_dssp             HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSS
T ss_pred             HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCcc
Confidence            799999999999999999999999977543   333334  344445543  567899999999997 588999988888


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      |  |.+++   +++|.++|+++|+++|+|++|. +..+.+..+..+.     ...+++.|+||++  +|+|+||+++++ 
T Consensus       175 ~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~-  241 (417)
T 3n0l_A          175 Y--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND-  241 (417)
T ss_dssp             C--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC-
T ss_pred             c--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC-
Confidence            6  77776   8899999999999999999964 4444443222221     2248999999995  888999999864 


Q ss_pred             CCCccchHHHHHHHHhhh
Q 020968          273 NGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~  290 (319)
                            +++.++++....
T Consensus       242 ------~~~~~~~~~~~~  253 (417)
T 3n0l_A          242 ------EELAKKINSAIF  253 (417)
T ss_dssp             ------HHHHHHHHHHHT
T ss_pred             ------HHHHHHHhhhhC
Confidence                  247777776654

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.88  E-value=4.9e-22  Score=182.96  Aligned_cols=218  Identities=16%  Similarity=0.139  Sum_probs=151.9

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc---CCHH--HHHHHH-HHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV---GILP--ARRAIA-DYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---g~~~--lr~~ia-~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .++++|..|.+.      .++.+.+++.+.+.......|+...   |.+.  +++.++ +.+.+.+|  .+++++++++|
T Consensus        23 ~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~sG   94 (407)
T 2dkj_A           23 REGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHSG   94 (407)
T ss_dssp             HTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred             hcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecch
Confidence            578999999853      2899999999887642233555432   4432  333221 23333333  34445556665


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcch---HHHHhhCCCeEEEEecc-CCCCCcCCHHHHHhhhcc-CceEEEEcCCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYY---EARATHSHLEVRHFDLL-PAKGWEVDLDAVEALADE-NTVALVIINPG  193 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~---~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~  193 (319)
                       ++|+..+++++.++||+|+++.|+|..+   ...++..|.++..++.. ..+++.+|++++++.+++ ++++|++++|+
T Consensus        95 -t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~  173 (407)
T 2dkj_A           95 -SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASA  173 (407)
T ss_dssp             -HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSS
T ss_pred             -HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccc
Confidence             5699999999999999999999999877   34445555533344432 123578999999999874 78999999999


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ||  ...+   +++|.++|+++|+++|+|++|.. +.+.+.....+   .  ..+++++|+||.  ++|.|+||+++++ 
T Consensus       174 ~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~~~~~-  240 (407)
T 2dkj_A          174 YP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLILSND-  240 (407)
T ss_dssp             CC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEEEESC-
T ss_pred             cC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEEEECC-
Confidence            98  4544   89999999999999999999997 55444322111   1  246899999996  5688999999863 


Q ss_pred             CCCccchHHHHHHHHhhh
Q 020968          273 NGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~  290 (319)
                            ++++++++....
T Consensus       241 ------~~~~~~l~~~~~  252 (407)
T 2dkj_A          241 ------PELGKRIDKLIF  252 (407)
T ss_dssp             ------HHHHHHHHHHHT
T ss_pred             ------HHHHHHHHhhhc
Confidence                  247777776654

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.88  E-value=8.4e-22  Score=180.25  Aligned_cols=197  Identities=16%  Similarity=0.083  Sum_probs=147.3

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL  138 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl  138 (319)
                      .++++.+.+++.+....    .|.+  .....++++.+++++..    . ..+++++|+|+++++..+++++.++||+|+
T Consensus        32 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~----~-~~~~v~~~~gg~~al~~~~~~~~~~gd~vl  102 (393)
T 3kgw_A           32 SNLAPRVLAAGSLRMIG----HMQKEMLQIMEEIKQGIQYVFQT----R-NPLTLVVSGSGHCAMETALFNLLEPGDSFL  102 (393)
T ss_dssp             CCCCHHHHHHTTCCCCC----TTSHHHHHHHHHHHHHHHHHHTC----C-CSEEEEESCCTTTHHHHHHHHHCCTTCEEE
T ss_pred             CCCCHHHHHHhcccccC----cccHHHHHHHHHHHHHHHHHhCC----C-CCcEEEEeCCcHHHHHHHHHhcCCCCCEEE
Confidence            46788888887653321    2222  22345677777777632    1 233699999999999999999999999999


Q ss_pred             EcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          139 LPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       139 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      ++.+.|.+  +...++..|.+++.++.+.  ++.+|++++++.+++ ++++|++++|+||||.+++   +++|.++|+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  177 (393)
T 3kgw_A          103 TGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRY  177 (393)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred             EEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHc
Confidence            99888853  3677888999999998754  346899999999987 8999999999999999987   88999999999


Q ss_pred             CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968          216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS  287 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~  287 (319)
                      |+++|+|++|....    .+..   ....+..+++.|+||+++. +.++||+++++        ++++++..
T Consensus       178 ~~~li~De~~~~g~----~~~~---~~~~~~d~~~~s~sK~~~~-~~g~g~~~~~~--------~~~~~~~~  233 (393)
T 3kgw_A          178 QCLLLVDSVASLGG----VPIY---MDQQGIDIMYSSSQKVLNA-PPGISLISFND--------KAKYKVYS  233 (393)
T ss_dssp             TCEEEEECTTTTTT----SCCC---TTTTTCCEEEEESSSTTCC-CSSCEEEEECH--------HHHHHHHT
T ss_pred             CCEEEEECCccccC----cccc---hhhcCCCEEEecCcccccC-CCceeEEEECH--------HHHHHHhc
Confidence            99999999987421    1111   1222345889999997632 23489998853        57777654

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.88  E-value=5.8e-22  Score=180.70  Aligned_cols=196  Identities=18%  Similarity=0.148  Sum_probs=153.9

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEc
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLP  140 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~  140 (319)
                      ..++.+.+++.+.+...   .|.+..+..++|+.+++++.        .+++++++|+++|+..++.++ .++||+|+++
T Consensus        14 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~   82 (373)
T 3frk_A           14 EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVP   82 (373)
T ss_dssp             HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence            34577888888777653   36666788999999999993        348999999999999999999 8999999999


Q ss_pred             CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968          141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI  220 (319)
Q Consensus       141 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  220 (319)
                      .++|..+...++..|++++.++.++ +++.+|++++++++++++++|+   |+||||...+   +++|.++|+++|+++|
T Consensus        83 ~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li  155 (373)
T 3frk_A           83 SNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLI  155 (373)
T ss_dssp             TTSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEE
T ss_pred             CCCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEE
Confidence            9999999999999999999999864 3578999999999988887777   7789999855   8899999999999999


Q ss_pred             EeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          221 ADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       221 ~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      +|++|+... +++...   ..+.    .+++.||+  |.++.+|. .|++++++       +++.++++....
T Consensus       156 ~D~a~~~g~~~~~~~~---~~~~----d~~~~S~~~~K~l~~~g~-gg~~~~~~-------~~~~~~~~~~~~  213 (373)
T 3frk_A          156 EDAAQAHGSLYKGMKV---GSLG----DAAGFSFYPAKNLGSLGD-GGAVVTND-------KDLAEKIKALSN  213 (373)
T ss_dssp             EECTTCTTCEETTEET---TSSS----SEEEEECCTTSSSCCSSS-CEEEEESC-------HHHHHHHHHHHB
T ss_pred             EECCcccCCEECCEec---cccc----cEEEEeCcCCCccCccce-eEEEEeCC-------HHHHHHHHHHHh
Confidence            999998633 232211   1111    27888877  88644353 78888764       246666665543

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.87  E-value=5.1e-22  Score=186.00  Aligned_cols=247  Identities=15%  Similarity=0.068  Sum_probs=163.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..|....... ..+|.+.+++.+++....  .|....+..+.+.++++++.+..+.. ..+++++|+|+++|+
T Consensus        63 G~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~  138 (453)
T 4ffc_A           63 GNSFIDLGAGIAVTTVG-ASHPAVAAAIADQATHFT--HTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEAV  138 (453)
T ss_dssp             SCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHHHCS--CCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHHH
T ss_pred             CCEEEEcCCCcccCcCC-CCCHHHHHHHHHHHHhcc--ccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHHH
Confidence            45578887774321111 237999999999887642  35544455677777777776655421 257999999999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCC--------------eEEEEeccC--CCCCcCC--------HHHHH
Q 020968          124 EVILTVLAR--PGANILLPRPGFPYYEARATHSHL--------------EVRHFDLLP--AKGWEVD--------LDAVE  177 (319)
Q Consensus       124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~~~l~  177 (319)
                      ..+++....  .+++|++..++|+++...+...+.              .+..++...  .+.++.+        .+.++
T Consensus       139 ~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~  218 (453)
T 4ffc_A          139 ENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIE  218 (453)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHH
Confidence            999987653  458999999999876544433211              344444421  1112233        35566


Q ss_pred             hhhccCceEEEEcCCCCccc--cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          178 ALADENTVALVIINPGNPCG--NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       178 ~~l~~~~~~v~l~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +.+..+..+++++.|.|++|  ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....+...   ..+.+|||
T Consensus       219 ~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~~~~---pdi~t~sK  294 (453)
T 4ffc_A          219 TQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FASEHEGIV---PDIVTMAK  294 (453)
T ss_dssp             HHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCC---CSEEEECG
T ss_pred             HhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chhhhcCCC---cchHhhhh
Confidence            66655566777888877776  4557778999999999999999999999988655532 122222221   22347899


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      .++. |+|+||++++.        ++++.+..... .+.+.++++|.++..++
T Consensus       295 ~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal  338 (453)
T 4ffc_A          295 GIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAAL  338 (453)
T ss_dssp             GGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHH
T ss_pred             hhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHH
Confidence            9866 99999999853        46666554332 34567888888776654

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.87  E-value=3.5e-21  Score=177.53  Aligned_cols=196  Identities=18%  Similarity=0.182  Sum_probs=151.4

Q ss_pred             HHHHHHHHHHhhcC------CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE---eCCHHHHHHHHHHHhcCCCC
Q 020968           65 SVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---TLGCTQAIEVILTVLARPGA  135 (319)
Q Consensus        65 ~~~~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~---~~G~t~ai~~~~~~l~~~gd  135 (319)
                      ..+.+++.+.....      ....|+. .+..+|++.+|+++        ..+..++   ++|+++|+..++.+++++||
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~--------g~e~alv~p~~~sGt~Ai~~al~all~~GD  102 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVF--------KTEAALVRPQIISGTHAISTVLFGILRPDD  102 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHH--------TCSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHh--------CCCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence            45667777653221      1223443 45688999999888        2345555   88999999999999999999


Q ss_pred             EEEEcC-CCCcchHHH----------HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC----CCCcccccc
Q 020968          136 NILLPR-PGFPYYEAR----------ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN----PGNPCGNVY  200 (319)
Q Consensus       136 ~Vl~~~-p~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~----p~nptG~~~  200 (319)
                      +|+++. |.|..+...          ++..|+++..++.++  ++.+|++++++++++++++|++++    |+||||.+ 
T Consensus       103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v-  179 (409)
T 3jzl_A          103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI-  179 (409)
T ss_dssp             EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred             EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence            999998 999987743          456789988888753  467999999999998999999999    99999998 


Q ss_pred             CHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCcc
Q 020968          201 TYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQ  277 (319)
Q Consensus       201 ~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~  277 (319)
                        .++++|+++|++  +|+++++|++|+.+.+...+   . ..   +..++++|+||.++.+| .+.||++++       
T Consensus       180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~---g~Div~~S~sK~lgg~~~~~GG~v~~~-------  243 (409)
T 3jzl_A          180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EV---GADIIAGSLIKNPGGGLAKTGGYIAGK-------  243 (409)
T ss_dssp             --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GG---TCSEEEEETTSGGGTTTCSSCEEEEEC-------
T ss_pred             --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-cc---CCeEEEECccccCCccCCceEEEEEeC-------
Confidence              779999999999  99999999999986643221   1 11   23499999999998776 456888874       


Q ss_pred             chHHHHHHHHhh
Q 020968          278 DSGIVDSIKSFL  289 (319)
Q Consensus       278 ~~~~~~~~~~~~  289 (319)
                       ++++++++...
T Consensus       244 -~~li~~l~~~~  254 (409)
T 3jzl_A          244 -EALVDLCGYRL  254 (409)
T ss_dssp             -HHHHHHHHHHH
T ss_pred             -HHHHHHHHHHh
Confidence             35888877643

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.87  E-value=1.4e-21  Score=182.09  Aligned_cols=233  Identities=16%  Similarity=0.159  Sum_probs=148.8

Q ss_pred             CCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +..++||..|...  ..++ .+|.+.+++.+++.....  ..| +.....++++.+++++        ..+++++++|++
T Consensus        64 G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------g~~~v~~~~sGs  132 (433)
T 1z7d_A           64 DKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL--------GYDKVLMMNTGA  132 (433)
T ss_dssp             CCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred             CCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc--------CCCeEEEeCCHH
Confidence            4457788776422  1245 789999999998876431  112 1222345555555555        257999999999


Q ss_pred             HHHHHHHHHhc---------CCC-CEEEEcCCCCcchHH-HHhhCC------------CeEEEEeccCCCCCcCCHHHHH
Q 020968          121 QAIEVILTVLA---------RPG-ANILLPRPGFPYYEA-RATHSH------------LEVRHFDLLPAKGWEVDLDAVE  177 (319)
Q Consensus       121 ~ai~~~~~~l~---------~~g-d~Vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~  177 (319)
                      +|+..+++.+.         .+| ++|++.+|+|+.+.. .+...|            .++..++.       .|++.++
T Consensus       133 eA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le  205 (433)
T 1z7d_A          133 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALE  205 (433)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHH
Confidence            99999998753         367 999999999987543 333333            23333332       3899999


Q ss_pred             hhh-ccCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          178 ALA-DENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       178 ~~l-~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +++ .+++++|++...+|++|.+ ++.+++++|.++|+++|+++|+||+|.++.+.+.. ..+..+.....++   |+||
T Consensus       206 ~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~-~~~~~~~~~~di~---t~sK  281 (433)
T 1z7d_A          206 EELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL-LCVHHYNVKPDVI---LLGK  281 (433)
T ss_dssp             HHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECG
T ss_pred             HHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcc-hhhHhcCCCCCEE---EECc
Confidence            998 4566665544446778975 68889999999999999999999999886554432 1112222222233   8999


Q ss_pred             ccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          256 RWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       256 ~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      .++ +| +|+||+++++        ++++.+.... ....+.+++++.++..++
T Consensus       282 ~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal  326 (433)
T 1z7d_A          282 ALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEAL  326 (433)
T ss_dssp             GGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHH
T ss_pred             ccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHH
Confidence            987 79 9999999853        4555544321 223456777777665544

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.87  E-value=1.3e-20  Score=174.34  Aligned_cols=181  Identities=10%  Similarity=0.110  Sum_probs=139.6

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  162 (319)
                      +...++|+.+|+++.        .+++++++|+++|+++++.+++++||+|+++.+.|.+....+    +..|+++..++
T Consensus        82 p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~  153 (415)
T 2fq6_A           82 LTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD  153 (415)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             chHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEEC
Confidence            346789999999882        346788899999999999999999999999999998766443    45789988886


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      .+       |++++++++++++++|++++|+||+|.+++   +++|+++|++  +|+++|+|++|+.....    .++ .
T Consensus       154 ~~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~  218 (415)
T 2fq6_A          154 PL-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-D  218 (415)
T ss_dssp             TT-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-G
T ss_pred             CC-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-c
Confidence            52       889999999988999999999999999976   8899999999  99999999999864321    122 1


Q ss_pred             cCCCCCeEEEecCccccCCCcce-eeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHH
Q 020968          241 FGSIVPVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQF  301 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~  301 (319)
                      +   +..+++.|+||.++.+|.+ +||+++++        +++++++..... ....++...+
T Consensus       219 ~---g~Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~  270 (415)
T 2fq6_A          219 F---GIDVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAY  270 (415)
T ss_dssp             G---TCSEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHH
T ss_pred             c---CCeEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHH
Confidence            2   2359999999999998865 58888754        245555554432 2233444333

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.87  E-value=1.8e-21  Score=182.26  Aligned_cols=232  Identities=14%  Similarity=0.110  Sum_probs=150.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||+.|.+.....+ .++.+.+++.+++....  .|+   +..++++++++++.+..+   +.+++++++|+++|+
T Consensus        56 g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~  126 (453)
T 2cy8_A           56 GNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETT  126 (453)
T ss_dssp             CCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHH
T ss_pred             CCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHH
Confidence            456789988864322223 68999999999887632  232   456899999999988664   578999999999999


Q ss_pred             HHHHHH---hcCCCCEEEEcCCCCcchHHHHhh-----------CCCe------EEEEeccCCCCCcCCHHHHHhhhcc-
Q 020968          124 EVILTV---LARPGANILLPRPGFPYYEARATH-----------SHLE------VRHFDLLPAKGWEVDLDAVEALADE-  182 (319)
Q Consensus       124 ~~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~~~l~~~l~~-  182 (319)
                      ..+++.   +.+ +++|++.+|+|+++...+..           .|..      +..++.       .|++++++.+++ 
T Consensus       127 ~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~  198 (453)
T 2cy8_A          127 LLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH  198 (453)
T ss_dssp             HHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc
Confidence            999987   654 46888888999865433221           1221      222221       389999988863 


Q ss_pred             --CceEEEEcCC-CCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968          183 --NTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI  258 (319)
Q Consensus       183 --~~~~v~l~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~  258 (319)
                        ++++ ++++| +|+||.+ .+.+.+++|.++|++||+++|+||+|.++ ..+.. ..+..+.-...+   .|+||.++
T Consensus       199 ~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK~l~  272 (453)
T 2cy8_A          199 GSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPDL---TCLAKASA  272 (453)
T ss_dssp             GGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCSE---EEEEGGGG
T ss_pred             CCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCcE---EEEChhhh
Confidence              4444 45655 5779975 47999999999999999999999999987 43321 111112211222   38999987


Q ss_pred             CCcceeeEEEeeCCCCCccchHHHHHHHH------hhhhcCCcchHHHHHHHHHH
Q 020968          259 VPGWRLGWLVTSDPNGILQDSGIVDSIKS------FLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l  307 (319)
                      . |+|+||+++++        ++++.+..      ....+.+.++++|.++..++
T Consensus       273 ~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal  318 (453)
T 2cy8_A          273 G-GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAI  318 (453)
T ss_dssp             T-TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHH
T ss_pred             C-CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHH
Confidence            4 99999999863        45555543      12223456778887765544

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.87  E-value=2.2e-21  Score=181.32  Aligned_cols=245  Identities=14%  Similarity=0.148  Sum_probs=160.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC-cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..++||+.|.+.....+. ++.+.+++.+++....   +... .+..+++..+++.+.+..+  .+.++|++|+|+++|
T Consensus        49 g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggsea  122 (449)
T 3a8u_X           49 GRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSEC  122 (449)
T ss_dssp             CCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHHH
T ss_pred             CCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHH
Confidence            4567888766532212223 7999999999886532   2111 2334556666666665443  367899999999999


Q ss_pred             HHHHHHHhcC--------CCCEEEEcCCCCcchH-HHHhhCCC------------eEEEEeccC--CCCC-cCC------
Q 020968          123 IEVILTVLAR--------PGANILLPRPGFPYYE-ARATHSHL------------EVRHFDLLP--AKGW-EVD------  172 (319)
Q Consensus       123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~--~~~~-~~d------  172 (319)
                      +..+++.+..        +||+|++.+|+|+++. ..+...|.            ++..++...  ..+| ++|      
T Consensus       123 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~  202 (449)
T 3a8u_X          123 ALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGI  202 (449)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHH
Confidence            9999988764        6799999999998754 34444331            234444321  1111 246      


Q ss_pred             --HHHHHhhhcc---CceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          173 --LDAVEALADE---NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       173 --~~~l~~~l~~---~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                        +++++++++.   ...++++++| +|+||. +.+.+.+++|.++|+++|+++|+||+|.++...+.. ..+..+....
T Consensus       203 ~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~~  281 (449)
T 3a8u_X          203 ALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVTP  281 (449)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCCC
Confidence              8999988862   2234455666 578996 667889999999999999999999999877554431 1222222222


Q ss_pred             CeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh----------hhhcCCcchHHHHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF----------LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~q~~~~~~l  307 (319)
                      +++   |+||.++. | +|+||+++++        ++++.+...          ...+...++++|.++..++
T Consensus       282 di~---s~sK~l~~-G~~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal  342 (449)
T 3a8u_X          282 DLM---CIAKQVTN-GAIPMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAAL  342 (449)
T ss_dssp             SEE---EECGGGGT-TSSCCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHH
T ss_pred             CEE---EEcccccC-CCCceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHH
Confidence            333   88999864 7 9999999853        577777653          1123456778877666544

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.87  E-value=6.9e-21  Score=177.62  Aligned_cols=233  Identities=15%  Similarity=0.066  Sum_probs=159.3

Q ss_pred             CCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCCC--CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARFN--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +..++||..|...  ..++ .+|.+.+++.+++......  .| +.....++++.+++++        ..+++++++|++
T Consensus        75 g~~ylD~~sg~~~--~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------g~~~v~~~~sGs  143 (439)
T 2oat_A           75 GRKYFDFLSSYSA--VNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF--------NYHKVLPMNTGV  143 (439)
T ss_dssp             CCEEEESSGGGGT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred             CCEEEEccCCccc--ccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc--------CCCEEEEeCCHH
Confidence            4457788887533  1244 7899999999988764321  23 2234567777777776        257899999999


Q ss_pred             HHHHHHHHHhc---------CCC-CEEEEcCCCCcchH-HHHhhCC------------CeEEEEeccCCCCCcCCHHHHH
Q 020968          121 QAIEVILTVLA---------RPG-ANILLPRPGFPYYE-ARATHSH------------LEVRHFDLLPAKGWEVDLDAVE  177 (319)
Q Consensus       121 ~ai~~~~~~l~---------~~g-d~Vl~~~p~~~~~~-~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~  177 (319)
                      +|+..+++.+.         .+| ++|++.+|+|+++. ..+...|            .++..++.       .|+++++
T Consensus       144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le  216 (439)
T 2oat_A          144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE  216 (439)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHH
Confidence            99999998864         356 89999999997753 3444434            34555543       3899999


Q ss_pred             hhhc-cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          178 ALAD-ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       178 ~~l~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +.++ +++++|++...+|++|. +++.+++++|.++|+++|+++|+||+|.++.+.+... .+..+.....++   |+||
T Consensus       217 ~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~sK  292 (439)
T 2oat_A          217 RALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLGK  292 (439)
T ss_dssp             HHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECG
T ss_pred             HHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eecc
Confidence            9984 55555554443577896 5688899999999999999999999998776555321 112222222233   8999


Q ss_pred             ccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          256 RWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       256 ~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      .++ +| +|+||+++++        ++++.+.... ....+.+++++.++..++
T Consensus       293 ~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal  337 (439)
T 2oat_A          293 ALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAAL  337 (439)
T ss_dssp             GGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred             ccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHH
Confidence            986 58 9999999853        4555554321 223456778777665544

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.87  E-value=4.3e-21  Score=177.58  Aligned_cols=195  Identities=15%  Similarity=0.148  Sum_probs=150.8

Q ss_pred             HHHHHHHHHHhhcC------CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE---eCCHHHHHHHHHHHhcCCCC
Q 020968           65 SVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---TLGCTQAIEVILTVLARPGA  135 (319)
Q Consensus        65 ~~~~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~---~~G~t~ai~~~~~~l~~~gd  135 (319)
                      +.+.+++.+.....      ....|+. .+..+|++.+++++        ..+..++   ++|+++|+..++.+++++||
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-~g~~~Le~~lA~l~--------g~e~alv~p~~~sGt~A~~~al~all~pGD  117 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYND-IGRDSLDRVYANIF--------NTESAFVRPHFVNGTHAIGAALFGNLRPND  117 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHH--------TCSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCc-hhHHHHHHHHHHHh--------CCCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence            56777777753321      1123443 36788999999888        3345566   78999999999999999999


Q ss_pred             EEEEcC-CCCcchH-----------HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcC----CCCccc
Q 020968          136 NILLPR-PGFPYYE-----------ARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIIN----PGNPCG  197 (319)
Q Consensus       136 ~Vl~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~----p~nptG  197 (319)
                      +|++++ |.|..+.           ..++..|++++.++.   +++.+|+++++++++  +++++|++++    |+||||
T Consensus       118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg  194 (427)
T 3hvy_A          118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL  194 (427)
T ss_dssp             EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred             EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence            999999 9998776           334567999888886   345799999999998  7899999999    999999


Q ss_pred             cccCHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCC
Q 020968          198 NVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNG  274 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~  274 (319)
                      .+   .++++|+++|++  +|+++++|++|+.+.+...+   + ..   +..++++|+||+++.+| .+.||++++    
T Consensus       195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~-~~---gaDiv~~S~sK~lgg~g~~~GG~i~~~----  260 (427)
T 3hvy_A          195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---T-DV---GADIIAGSLIKNIGGGIATTGGYIAGK----  260 (427)
T ss_dssp             CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---G-GG---TCSEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred             cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCCC---c-cc---CCeEEEECCcccccccccceEEEEEEC----
Confidence            88   789999999999  89999999999886643221   1 11   23499999999987766 556888874    


Q ss_pred             CccchHHHHHHHHhh
Q 020968          275 ILQDSGIVDSIKSFL  289 (319)
Q Consensus       275 ~~~~~~~~~~~~~~~  289 (319)
                          ++++++++...
T Consensus       261 ----~~li~~l~~~~  271 (427)
T 3hvy_A          261 ----EEYVTQATFRV  271 (427)
T ss_dssp             ----HHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHh
Confidence                36888887754

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.87  E-value=5.1e-21  Score=179.49  Aligned_cols=248  Identities=13%  Similarity=0.096  Sum_probs=165.5

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|....... ..+|.+.+++.+++..... .|....+..+.++++++++.+..+  .+.++|++++|+++|
T Consensus        48 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA  123 (459)
T 4a6r_A           48 EGNKIIDGMAGLWCVNVG-YGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSES  123 (459)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhcccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence            356788998874321111 2368999999998876432 344434556777777777776554  356799999999999


Q ss_pred             HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccC--C-CCCcCC------
Q 020968          123 IEVILTVLAR--------PGANILLPRPGFPYYEARATHSHL-------------EVRHFDLLP--A-KGWEVD------  172 (319)
Q Consensus       123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d------  172 (319)
                      +..+++.+.+        ++++|++..|+|+++...+...+.             .+..++...  . ..+ .|      
T Consensus       124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~  202 (459)
T 4a6r_A          124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV  202 (459)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence            9999998875        579999999999987654443321             223333211  0 111 34      


Q ss_pred             --HHHHHhhhcc---CceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          173 --LDAVEALADE---NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       173 --~~~l~~~l~~---~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                        +++|++.+..   +..+++++.| ++++|. +++.+.+++|.++|+++|+++|+||+|.++...|... ....+....
T Consensus       203 ~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~p  281 (459)
T 4a6r_A          203 VAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQP  281 (459)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCC
Confidence              7788887752   3345555666 455555 5688999999999999999999999999886655321 122222222


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH---Hhh-hhcCCcchHHHHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK---SFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      .++   +|||.++.+|+|+||++++.        ++++.+.   ... ..+.+.++++|.++..++
T Consensus       282 di~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal  336 (459)
T 4a6r_A          282 DLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANV  336 (459)
T ss_dssp             SEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHH
T ss_pred             Cee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHH
Confidence            233   68999766669999999853        5777776   222 223466888888877655

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.87  E-value=2.1e-20  Score=174.91  Aligned_cols=201  Identities=14%  Similarity=0.013  Sum_probs=157.2

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC---CcEEEeCCHHHHHHHHHHHhcC------
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP---DDVYLTLGCTQAIEVILTVLAR------  132 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~~~~G~t~ai~~~~~~l~~------  132 (319)
                      +.++.+.+++.+.+.... ..|...++..++++.+++++.+.+|...+.   ..+++|+|+++|+..++.++.+      
T Consensus        53 ~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~  131 (452)
T 2dgk_A           53 WDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM  131 (452)
T ss_dssp             CCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence            445788898888876533 246556677888899988888877754322   2499999999999999888753      


Q ss_pred             --CC-----CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968          133 --PG-----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       133 --~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l  205 (319)
                        +|     ++|+++. .|..+...++..|++++.++.++ +++.+|+++|++++++++++|++++|+||||.+.+   +
T Consensus       132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l  206 (452)
T 2dgk_A          132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---P  206 (452)
T ss_dssp             HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---H
T ss_pred             HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---H
Confidence              55     5899999 99999999999999999999864 35789999999999988999999999999999954   8


Q ss_pred             HHHHHHHHHc------CCEEEEeCCCCCccC---CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          206 QKIAETAKKL------GIMVIADEVYDHLAF---GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       206 ~~i~~~~~~~------~~~li~D~a~~~~~~---~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ++|.++|+++      ++++++|++|+.+..   .+.....   +....-.+++.|++|. ++.|.++||+++.++
T Consensus       207 ~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~  278 (452)
T 2dgk_A          207 QPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD---FRLPRVKSISASGHKF-GLAPLGCGWVIWRDE  278 (452)
T ss_dssp             HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS---TTSTTEEEEEEETTTT-TCCCSSCEEEEESSG
T ss_pred             HHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhh---cCCCCCcEEEECcccc-cCCCCCeEEEEEcCH
Confidence            8889999885      999999999998653   2211111   1111223677889995 789999999998653

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.87  E-value=1.2e-20  Score=171.56  Aligned_cols=195  Identities=15%  Similarity=0.124  Sum_probs=153.7

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh---cCCCCEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL---ARPGANI  137 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l---~~~gd~V  137 (319)
                      .++++.+.+++.+.+...   .|.+.....++|+++++++.        .+++++++|+++|+..+++++   .++||+|
T Consensus         9 ~~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~~~~~~~~gd~V   77 (375)
T 2fnu_A            9 PCLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLG--------VKHALVFNSATSALLTLYRNFSEFSADRNEI   77 (375)
T ss_dssp             CCCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHSSCCCTTSCEE
T ss_pred             CCCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcccCCCCCEE
Confidence            356789999999988653   24445567899999999983        238999999999999999999   8899999


Q ss_pred             EEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968          138 LLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI  217 (319)
Q Consensus       138 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~  217 (319)
                      +++.|+|..+...++..|++++.++.++.  ..+|++++++.+++++++|++++|   ||.+.+   +++|.++|+++|+
T Consensus        78 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~  149 (375)
T 2fnu_A           78 ITTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSL  149 (375)
T ss_dssp             EECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTC
T ss_pred             EECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCC
Confidence            99999999999999999999999988643  268999999999888888888876   999976   7899999999999


Q ss_pred             EEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       218 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      ++|+|++|........     ..+.... .+.+.|+|  |.++. |  +|++++.++      ++++++++...
T Consensus       150 ~li~D~a~~~~~~~~~-----~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~~  208 (375)
T 2fnu_A          150 SFLSDSSHALGSEYQN-----KKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLFR  208 (375)
T ss_dssp             EEEEECTTCTTCEETT-----EETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHHT
T ss_pred             EEEEECccccCCeECC-----eeccccC-CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHHH
Confidence            9999999986442110     1122111 37888888  99755 6  788887431      24777776654

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.87  E-value=5e-22  Score=179.97  Aligned_cols=214  Identities=15%  Similarity=0.109  Sum_probs=152.7

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      ......++.+...    ++++|.+.+++.+.+.   ...|+++.+..++++++++++.        .+..++++|+++++
T Consensus        12 ~~~~~~~~~~~~~----~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~g~~a~   76 (359)
T 3pj0_A           12 KTPYKLGGNGPRN----VGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQ   76 (359)
T ss_dssp             TCSEESSSSSCCB----HHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred             hcchhhcCCCccc----cCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence            4555666666533    4567888888876433   2357777788999999999983        23346668889999


Q ss_pred             HHHHHHhcCCCCE--EEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc-c
Q 020968          124 EVILTVLARPGAN--ILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC-G  197 (319)
Q Consensus       124 ~~~~~~l~~~gd~--Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt-G  197 (319)
                      ..+++++.++||+  |+++.+.|....   ..+...|.+++.++.   +++.+|+++++++ .+++++|++++|+||+ |
T Consensus        77 ~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G  152 (359)
T 3pj0_A           77 QIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGG  152 (359)
T ss_dssp             HHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTS
T ss_pred             HHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCc
Confidence            9999999888876  555555554321   223556888888775   3468999999998 7788999999999998 7


Q ss_pred             cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC--CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCC
Q 020968          198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI  275 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~  275 (319)
                      .+++.+++++|+++|+++|+++|+|++|..+..  .+.....   +.... .+++.|+||+++.++.  ||++++     
T Consensus       153 ~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~-d~~~~s~sK~~~~~~g--g~~~~~-----  221 (359)
T 3pj0_A          153 QLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEE---ICALF-DSVYVSFYKGIGGIAG--AILAGN-----  221 (359)
T ss_dssp             BCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHH---HHTTC-SEEEEESSSTTCCSSC--EEEEEC-----
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHH---hhccC-CEEEEeccccCCCcce--EEEECC-----
Confidence            999999999999999999999999999875431  1211111   11111 2556699999877632  676663     


Q ss_pred             ccchHHHHHHHHhhh
Q 020968          276 LQDSGIVDSIKSFLN  290 (319)
Q Consensus       276 ~~~~~~~~~~~~~~~  290 (319)
                         ++++++++....
T Consensus       222 ---~~l~~~~~~~~~  233 (359)
T 3pj0_A          222 ---DDFVQEAKIWKR  233 (359)
T ss_dssp             ---HHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHH
Confidence               358888876543

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.87  E-value=1.5e-20  Score=174.03  Aligned_cols=196  Identities=16%  Similarity=0.150  Sum_probs=150.5

Q ss_pred             HHHHHHHHHHhhcC------CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE---eCCHHHHHHHHHHHhcCCCC
Q 020968           65 SVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---TLGCTQAIEVILTVLARPGA  135 (319)
Q Consensus        65 ~~~~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~---~~G~t~ai~~~~~~l~~~gd  135 (319)
                      +.+.+++.+.....      ....|+ ..+..+|++.+|+++.        .+..++   ++|+++|+..++.+++++||
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~-~~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD  116 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYG-DIGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGN  116 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTT-CHHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCC-HHHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence            45777776642211      112343 3467889999998883        334455   88899999999999999999


Q ss_pred             EEEEcC-CCCcchHH-----------HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcC----CCCccc
Q 020968          136 NILLPR-PGFPYYEA-----------RATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIIN----PGNPCG  197 (319)
Q Consensus       136 ~Vl~~~-p~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~----p~nptG  197 (319)
                      +|+++. |.|..+..           .++..|++++.++.+.  ++.+|+++++++++  +++++|++++    |+||+|
T Consensus       117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg  194 (427)
T 3i16_A          117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL  194 (427)
T ss_dssp             EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred             EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence            999999 99988763           3456789988888753  35689999999998  7899999999    999999


Q ss_pred             cccCHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCC
Q 020968          198 NVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNG  274 (319)
Q Consensus       198 ~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~  274 (319)
                      .+   .++++|+++|++  +|+++++|++|..+.+...+   + ..   +..++++|+||.++.+| .+.||++++    
T Consensus       195 ~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~-~~---gaDiv~~S~sK~lgg~g~~~gG~i~~~----  260 (427)
T 3i16_A          195 LI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---T-DV---GADLIAGSLIKNIGGGIAPTGGYLAGT----  260 (427)
T ss_dssp             CH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---G-GG---TCSEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred             cH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCCc---c-cc---CCeEEEecCcccCCCCCCceEEEEEEC----
Confidence            88   789999999999  99999999999986643211   1 11   23499999999988776 677999885    


Q ss_pred             CccchHHHHHHHHhh
Q 020968          275 ILQDSGIVDSIKSFL  289 (319)
Q Consensus       275 ~~~~~~~~~~~~~~~  289 (319)
                          ++++++++...
T Consensus       261 ----~~li~~l~~~~  271 (427)
T 3i16_A          261 ----KDCIEKTSYRL  271 (427)
T ss_dssp             ----HHHHHHHHHHH
T ss_pred             ----HHHHHHHHHhc
Confidence                36888887743

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.86  E-value=4.1e-21  Score=177.38  Aligned_cols=197  Identities=14%  Similarity=0.098  Sum_probs=143.4

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-----CCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-----YSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-----Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      ++.+.|+.+.+.     +.++.+.+++.+.+.......     |..  .....++++.+++++      +.++++|++|+
T Consensus        27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   95 (416)
T 1qz9_A           27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVTD   95 (416)
T ss_dssp             TTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEECS
T ss_pred             CCeEeecCCCcC-----CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEeC
Confidence            568899988754     567788899988876431100     110  123456666666665      34578999999


Q ss_pred             CHHHHHHHHHHHhc------CCCCEE-EEcCCCCcchHHH----HhhC--CCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968          118 GCTQAIEVILTVLA------RPGANI-LLPRPGFPYYEAR----ATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENT  184 (319)
Q Consensus       118 G~t~ai~~~~~~l~------~~gd~V-l~~~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  184 (319)
                      |+++++..++.++.      ++||+| +++.+.|..+...    ++..  |.+++.++.         ++++++++++++
T Consensus        96 g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~  166 (416)
T 1qz9_A           96 TTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDT  166 (416)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTE
T ss_pred             ChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCc
Confidence            99999998888876      889874 5555677754433    2333  888887764         678888888888


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      ++|++++|+||||.+++   +++|.++|+++|+++|+|++|+.    +..+..+..+.   ..+++.|++|++ .+|.++
T Consensus       167 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~---~d~~~~s~~K~l-~~g~~~  235 (416)
T 1qz9_A          167 AVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAG---ADYAIGCTYKYL-NGGPGS  235 (416)
T ss_dssp             EEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHT---CSEEEECSSSTT-CCCTTC
T ss_pred             eEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhcC---CCEEEecCcccC-CCCCCC
Confidence            99999999999999987   89999999999999999999974    22222222222   348899999995 567777


Q ss_pred             -eEEEeeCC
Q 020968          265 -GWLVTSDP  272 (319)
Q Consensus       265 -G~i~~~~~  272 (319)
                       ||++++++
T Consensus       236 ~g~l~~~~~  244 (416)
T 1qz9_A          236 QAFVWVSPQ  244 (416)
T ss_dssp             CCEEEECTT
T ss_pred             eEEEEECHH
Confidence             99998653

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.86  E-value=7.8e-21  Score=178.28  Aligned_cols=249  Identities=15%  Similarity=0.048  Sum_probs=164.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|...... -..+|.+.+++.+++..... .|....+..+++.++++.+.+..+  .+.++|++++|+++|
T Consensus        49 ~G~~~lD~~~~~~~~~l-G~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA  124 (460)
T 3gju_A           49 NGRKSIDAFAGLYCVNV-GYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDA  124 (460)
T ss_dssp             TCCEEEETTHHHHTCTT-CBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhccC-CCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHH
Confidence            36678999887321111 12468999999988765432 344444555677777777766543  456799999999999


Q ss_pred             HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHhhCC-------------CeEEEEeccC---CCCCcCC------
Q 020968          123 IEVILTVLAR--------PGANILLPRPGFPYYEARATHSH-------------LEVRHFDLLP---AKGWEVD------  172 (319)
Q Consensus       123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~---~~~~~~d------  172 (319)
                      +..+++.+..        .+++|++..|+|+++...+...+             ..+..++...   .++++.+      
T Consensus       125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~  204 (460)
T 3gju_A          125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ  204 (460)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence            9999998864        46999999999987654443321             1234444211   0111233      


Q ss_pred             --HHHHHhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          173 --LDAVEALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       173 --~~~l~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                        +++|++++.    +++++|++..++|++|. +++.+.+++|.++|++||+++|+||+|.++...+... ....+....
T Consensus       205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~p  283 (460)
T 3gju_A          205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIKP  283 (460)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCC
Confidence              578888775    34455555555677776 7788889999999999999999999999886555321 122222222


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh-------h-hhcCCcchHHHHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------L-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~q~~~~~~l  307 (319)
                      .+   .+|||+++.+++|+||++++.        ++++.+...       . ..+.+.++++|.++..++
T Consensus       284 di---~t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal  342 (460)
T 3gju_A          284 DL---ITIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANL  342 (460)
T ss_dssp             SE---EEECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHH
T ss_pred             Ce---eeeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHH
Confidence            23   368999654338999999864        577777532       1 234567888888877655

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.86  E-value=3.8e-22  Score=180.76  Aligned_cols=193  Identities=13%  Similarity=0.087  Sum_probs=138.5

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC---CCCCCCC---CcC----CHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA---RFNCYSS---TVG----ILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~---~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      .+++++.|.      .++++.+.+++.+.+...   ....|..   ..+    ..++|+.+++++    |.. ++++|++
T Consensus         3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~v~~   71 (360)
T 1w23_A            3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL----QIP-NDYQILF   71 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEE
T ss_pred             ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE
Confidence            467888886      367899999999887532   0111211   222    345555555555    432 3579999


Q ss_pred             eCCH-HHHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHh-hhccCceEEEEc
Q 020968          116 TLGC-TQAIEVILTVLARP---GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVII  190 (319)
Q Consensus       116 ~~G~-t~ai~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~v~l~  190 (319)
                      ++|+ ++|+..++.++..+   ||.|+++.++|.. ...++..| +++.++.+++++ .+|++++++ ++++++++|+++
T Consensus        72 ~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~  148 (360)
T 1w23_A           72 LQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHIT  148 (360)
T ss_dssp             ESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEE
T ss_pred             ECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEe
Confidence            9999 99999999998865   5667776666654 34467789 999998864333 378899998 888889999999


Q ss_pred             CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      +|+||||.+++  ++.      +++|+++|+|++|+.+..    +..+..+     .++++|+||.|+.+|  +||++++
T Consensus       149 ~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~  209 (360)
T 1w23_A          149 SNNTIYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVK  209 (360)
T ss_dssp             SEETTTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEE
T ss_pred             CCCCCcceecc--ccc------ccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEc
Confidence            99999999987  332      278999999999987432    2223322     288999999998666  9999986


Q ss_pred             C
Q 020968          271 D  271 (319)
Q Consensus       271 ~  271 (319)
                      +
T Consensus       210 ~  210 (360)
T 1w23_A          210 K  210 (360)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.86  E-value=2.5e-21  Score=181.48  Aligned_cols=243  Identities=12%  Similarity=0.065  Sum_probs=158.4

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC--CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      .++||..|....... ..+|.+.+++.+++......  .+.+.....+|++.+++++      +.+.+++++++|+++|+
T Consensus        76 ~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~------~~~~~~v~~~~sGseA~  148 (457)
T 3tfu_A           76 EVLDAMSSWWTAIHG-HGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT------PAGLDTVFFSDSGSVSV  148 (457)
T ss_dssp             EEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS------STTEEEEEEESSHHHHH
T ss_pred             EEEECCCcHhhhccC-CCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCcCEEEEeCcHHHHH
Confidence            677887763211111 25789999999988653221  1112223345555555554      23567999999999999


Q ss_pred             HHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhhCC--------------CeEEEEeccCCCCCcCCHHHHHhhhc
Q 020968          124 EVILTVLAR-------PG-ANILLPRPGFPYYEARATHSH--------------LEVRHFDLLPAKGWEVDLDAVEALAD  181 (319)
Q Consensus       124 ~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~~~d~~~l~~~l~  181 (319)
                      ..+++.+..       +| ++|++.+++|.++...+...+              ..+..++.........|++.++++++
T Consensus       149 ~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~  228 (457)
T 3tfu_A          149 EVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLA  228 (457)
T ss_dssp             HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHH
Confidence            999988764       55 589999999987654444331              12233333211111247888998887


Q ss_pred             ---cCceEEEEcC-CCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          182 ---ENTVALVIIN-PGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       182 ---~~~~~v~l~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                         +++++|++.. ++|++|.+. +.+.+++|.++|+++|+++|+||+|.+|.+.+... ....+....+++   +|||.
T Consensus       229 ~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii---t~sK~  304 (457)
T 3tfu_A          229 QHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM---CVGKA  304 (457)
T ss_dssp             HHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGG
T ss_pred             hCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE---EEChh
Confidence               5667777777 789999766 77779999999999999999999999886655321 222223223334   88998


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++.+.+|+||+++++        ++++.+...      ...+.+.++++|.++..++
T Consensus       305 l~gG~~~lG~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL  353 (457)
T 3tfu_A          305 LTGGYLSLAATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASV  353 (457)
T ss_dssp             GGTTSSCCEEEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHH
T ss_pred             hhCCCcceEEEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHH
Confidence            644337999999864        577777521      1223466788887766644

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.86  E-value=1.7e-21  Score=180.90  Aligned_cols=234  Identities=14%  Similarity=0.064  Sum_probs=154.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..|.+..... ..+|.+.+++.+++.....  |..   ..+++.++++++.+..+   +.+++++++|+++|+
T Consensus        51 g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea~  121 (427)
T 3fq8_A           51 GNRYIDYVGTWGPAICG-HAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEAC  121 (427)
T ss_dssp             SCEEEESSGGGTTCTTC-BTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHHH
T ss_pred             CCEEEECCCchhhhccC-CCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHH
Confidence            56789999886432111 2589999999998876433  322   23556666666666544   578999999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CCe-------------------EEEEeccCCCCCcCCHHHHHhhhc
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEARATHS-HLE-------------------VRHFDLLPAKGWEVDLDAVEALAD  181 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~~-------------------~~~~~~~~~~~~~~d~~~l~~~l~  181 (319)
                      ..+++...  ..+++|++..|+|+++...+... +..                   +..++.       -|+++++++++
T Consensus       122 ~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~  194 (427)
T 3fq8_A          122 MAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKALFA  194 (427)
T ss_dssp             HHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHHHH
Confidence            99995432  24578999999997643322211 111                   222221       18999999886


Q ss_pred             c---CceEEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968          182 E---NTVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW  257 (319)
Q Consensus       182 ~---~~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~  257 (319)
                      +   ++++|++..++|++|.+.+ .+.+++|.++|+++|+++|+||+|.++ ..+.. .....+.....   +.|+||.+
T Consensus       195 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~  269 (427)
T 3fq8_A          195 ENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLGKII  269 (427)
T ss_dssp             HSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEECGGG
T ss_pred             hCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhhhhh
Confidence            5   4556666555777887655 555999999999999999999999987 44422 11111221112   35889998


Q ss_pred             CCCcceeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       258 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      + +|+|+||++++.        ++++.+...    ...+.+.+++++.++..++
T Consensus       270 ~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal  314 (427)
T 3fq8_A          270 G-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTL  314 (427)
T ss_dssp             G-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHH
T ss_pred             h-CCcceEEEEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHH
Confidence            7 799999998743        466666542    1223455788887776654

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.86  E-value=1.2e-20  Score=172.66  Aligned_cols=197  Identities=18%  Similarity=0.204  Sum_probs=152.1

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH-HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI-ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANIL  138 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl  138 (319)
                      +++++.+.+++.+.+.++.+..|+  +...+||+++ +++++       ..+++++++|+++|+..++.++ +++||+|+
T Consensus        12 ~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi   82 (377)
T 3ju7_A           12 TVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYAL   82 (377)
T ss_dssp             CCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEE
T ss_pred             CCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence            788899999999988775432233  3578999999 99882       1567999999999999999998 89999999


Q ss_pred             EcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh-ccC--ceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DEN--TVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       139 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      ++.|+|..+...+...|++++.+++++ ++|.+|++++++++ +++  +++|+   |+||+|...+   +++|.++|+ +
T Consensus        83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~  154 (377)
T 3ju7_A           83 MPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK-K  154 (377)
T ss_dssp             EESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-T
T ss_pred             ECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-c
Confidence            999999999999999999999999864 46789999999988 555  77665   6788999865   788888899 9


Q ss_pred             CCEEEEeCCCCCccC-CCCCCCCC-cccCCCCCeEEEec--CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          216 GIMVIADEVYDHLAF-GNTPFVPM-GVFGSIVPVLTLGS--ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       216 ~~~li~D~a~~~~~~-~~~~~~~~-~~~~~~~~vi~~~s--~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      |+++|+|++|..... .+.   .+ ..+.  +  +.+.|  .+|.++. | +.|++++++       +++.++++..+.
T Consensus       155 ~~~vi~D~a~a~g~~~~~~---~~g~~~~--d--~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~  217 (377)
T 3ju7_A          155 GVPVVVDAAPGFGLMNGGM---HYGQDFS--G--MIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGN  217 (377)
T ss_dssp             TCCBEEECTTCTTCEETTE---ETTTTCS--S--EEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTB
T ss_pred             CCEEEEECCCccCCeECCE---eccCCCC--c--EEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHh
Confidence            999999999986432 221   11 1111  2  44555  5698765 4 678888765       357777776654

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.86  E-value=4.5e-20  Score=171.91  Aligned_cols=181  Identities=14%  Similarity=0.127  Sum_probs=138.1

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  162 (319)
                      +...++|+.+++++.      .+  +.++++++++|++.++.+++++||+|+++.+.|.++...    ++..|+++..++
T Consensus       114 ~~~~~l~~~lA~l~g------~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  185 (445)
T 1qgn_A          114 PTTVVLEEKISALEG------AE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVID  185 (445)
T ss_dssp             HHHHHHHHHHHHHHT------CS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhC------CC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence            345689999998872      22  444445555999999999999999999999999876653    567899998887


Q ss_pred             ccCCCCCcCCHHHHHhhhccCc-eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          163 LLPAKGWEVDLDAVEALADENT-VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~-~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      .+       |++++++++++++ ++|++++|+||||.+.+   +++|.++|+++|+++|+|++|......    .++ .+
T Consensus       186 ~~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~~  250 (445)
T 1qgn_A          186 PA-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-AL  250 (445)
T ss_dssp             SS-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TT
T ss_pred             CC-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-cc
Confidence            52       8999999998888 99999999999999976   889999999999999999999864321    111 11


Q ss_pred             CCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQF  301 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~  301 (319)
                         +..+++.|+||.++.+| .++||+++++        +++++++..... ....+++..+
T Consensus       251 ---g~Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~  301 (445)
T 1qgn_A          251 ---GADLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAY  301 (445)
T ss_dssp             ---TCSEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHH
T ss_pred             ---CCEEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHH
Confidence               33489999999988766 5799999843        577777665543 2334444433

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.86  E-value=3.6e-21  Score=180.17  Aligned_cols=247  Identities=17%  Similarity=0.074  Sum_probs=160.0

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..|.+..... ..+|.+.+++.+++....  .|....+..+.+.++++.+.+..+.. ..+++++|+|+++|+
T Consensus        60 g~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~  135 (451)
T 3oks_A           60 GNRLIDLGSGIAVTTVG-NSAPKVVEAVRSQVGDFT--HTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSALFNSGSEAV  135 (451)
T ss_dssp             SCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHTTCS--CCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEEESSHHHHH
T ss_pred             CCEEEEcCCCccccccC-CCCHHHHHHHHHHHHhcc--cccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEEeCcHHHHH
Confidence            45577887764321111 237999999999887642  45544456677778888777755421 357899999999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCC--------------eEEEEeccCC--------CCCc---CCHHHH
Q 020968          124 EVILTVLAR--PGANILLPRPGFPYYEARATHSHL--------------EVRHFDLLPA--------KGWE---VDLDAV  176 (319)
Q Consensus       124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~d~~~l  176 (319)
                      ..+++....  .+++|++..++|+++...+...+.              .+..++....        +...   .+++.+
T Consensus       136 ~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  215 (451)
T 3oks_A          136 ENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRA  215 (451)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHH
Confidence            999987653  458999999999876544433211              3444443210        0000   123333


Q ss_pred             Hhhh----ccCceEEEEcCCCCccc--cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968          177 EALA----DENTVALVIINPGNPCG--NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL  250 (319)
Q Consensus       177 ~~~l----~~~~~~v~l~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~  250 (319)
                      ++.+    ..+..+++++.|.|++|  ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....+.....++  
T Consensus       216 ~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pdi~--  292 (451)
T 3oks_A          216 ITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPDLI--  292 (451)
T ss_dssp             HHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE--
T ss_pred             HHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCCee--
Confidence            3333    23456667777866554  3456677999999999999999999999988665532 2222222222233  


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                       ||||.++. |+|+||++++.        ++++.+..... .+.+.++++|.+...++
T Consensus       293 -t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal  340 (451)
T 3oks_A          293 -VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATI  340 (451)
T ss_dssp             -EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHH
T ss_pred             -eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHH
Confidence             88999865 99999999853        46665554332 34567888888776654

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.86  E-value=1.2e-20  Score=175.19  Aligned_cols=179  Identities=20%  Similarity=0.213  Sum_probs=136.6

Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CCCcchHHHH----------hhCCCeEEEE
Q 020968           93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR-PGFPYYEARA----------THSHLEVRHF  161 (319)
Q Consensus        93 r~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~-p~~~~~~~~~----------~~~g~~~~~~  161 (319)
                      ++.+++.+.+.+|......+++++ ++++|+..++.+++++||+|+++. |.|..+...+          +..|++++.+
T Consensus        67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v  145 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV  145 (431)
T ss_dssp             HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC
T ss_pred             HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEe
Confidence            455555555444433222233345 678999999999999999999998 9999887554          4578999988


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEc-CCCCccccccCHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCC
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPM  238 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~  238 (319)
                      +.++  ++.+|++++++++++++++|+++ +|+||+|...+.+++++|+++|++  +|+++|+|++|+.+.++..+ .  
T Consensus       146 ~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~-~--  220 (431)
T 3ht4_A          146 PLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP-C--  220 (431)
T ss_dssp             CBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG-G--
T ss_pred             CCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc-c--
Confidence            8754  46799999999999899999999 589999999999999999999999  99999999999998764321 1  


Q ss_pred             cccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          239 GVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       239 ~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                       .+.   ..++++|+||+++. .+...||++++.        +++++++...
T Consensus       221 -~~g---~Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~~  260 (431)
T 3ht4_A          221 -HVG---ADLMAGSLIKNPGGGIVKTGGYIVGKE--------QYVEACAYRL  260 (431)
T ss_dssp             -GTT---CSEEEEETTSGGGTTTCSSCEEEEECH--------HHHHHHHHHH
T ss_pred             -ccC---CeEEEcCccccCCCCCCCceEEEEecH--------HHHHHHHHHh
Confidence             122   23999999999654 223349999853        5777777643

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.86  E-value=7.1e-21  Score=177.95  Aligned_cols=245  Identities=14%  Similarity=0.056  Sum_probs=155.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.......+ .+|.+.+++.+++....  .|....+..+.+.++++++.+..+  .+.+++++++|+++|
T Consensus        42 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA  116 (448)
T 3dod_A           42 NGKEYYDGFSSVWLNVHGH-RKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA  116 (448)
T ss_dssp             TSCEEEETTHHHHTCSSCB-SCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence            3667889988743222222 37999999999887642  333344556777777777777553  345799999999999


Q ss_pred             HHHHHHHhcC----CC----CEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcC----------
Q 020968          123 IEVILTVLAR----PG----ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEV----------  171 (319)
Q Consensus       123 i~~~~~~l~~----~g----d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~----------  171 (319)
                      +..+++.+..    +|    ++|++..|+|+++...+...+.             .+..++.  ...|..          
T Consensus       117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  194 (448)
T 3dod_A          117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECRD  194 (448)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhhH
Confidence            9999998865    44    9999999999876543332221             1222222  122222          


Q ss_pred             -CHHHHHhhhc---cCceEEEEcCCC-Cccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          172 -DLDAVEALAD---ENTVALVIINPG-NPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       172 -d~~~l~~~l~---~~~~~v~l~~p~-nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                       |+++|++++.   +++++|++..++ |++| .+++.+.+++|.++|++||+++|+||+|.++...+... ....+.-..
T Consensus       195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~  273 (448)
T 3dod_A          195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP  273 (448)
T ss_dssp             HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence             4788888886   344555555555 7887 56677889999999999999999999999876655432 222222222


Q ss_pred             CeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH-------hh-hhcCCcchHHHHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-------FL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      .   +.++||.++. | +|+||++++.        ++++.+..       .. ..+.+.++++|.++..++
T Consensus       274 d---i~t~sK~l~~-G~~~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal  332 (448)
T 3dod_A          274 D---LMAAGKGITG-GYLPIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENL  332 (448)
T ss_dssp             S---EEEECGGGGT-TSSCCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHH
T ss_pred             C---EEEecccccC-CcCceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHH
Confidence            2   3368999854 8 5999999863        57776654       22 234466788888776655

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.85  E-value=2.2e-21  Score=176.03  Aligned_cols=194  Identities=11%  Similarity=0.042  Sum_probs=138.6

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-c-EEE
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSSTVGILPARRAIADYLNRDLPYKLSPD-D-VYL  115 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~-i~~  115 (319)
                      .++.++.|.      .++++.+++++.+.+....        ..+|.+  +..++++.+++.+.+.+|.  +.+ + +++
T Consensus         4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~   73 (362)
T 2c0r_A            4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI   73 (362)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred             ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence            456777764      5789999999998875321        111221  2345667777777766664  343 5 467


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCC--CCCcCCHHHHHhhhccCceEEEEcC
Q 020968          116 TLGCTQAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPA--KGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      |+|++++++.++.+++++||+|++..+.+..  +...++..| +++.++.+.+  .+..+|.++++  +++++++|++++
T Consensus        74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~  150 (362)
T 2c0r_A           74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS  150 (362)
T ss_dssp             SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence            8999999999999999999999988766544  245667789 9998887532  22334665543  567889999999


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      |+||||.+++  ++++|      +|+++++|++|..+.    .+..+...     .+++.|+||+++.+|  +||++++.
T Consensus       151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~----~~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~  211 (362)
T 2c0r_A          151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILS----RPFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE  211 (362)
T ss_dssp             EETTTTEECS--SCCCC------TTSCEEEECTTTTTS----SCCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred             CcCccceecc--ccccc------CCCEEEEEChhhccC----CccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence            9999999754  35554      799999999998743    22222222     378889999998888  99999865

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.85  E-value=5.3e-21  Score=180.49  Aligned_cols=208  Identities=14%  Similarity=0.055  Sum_probs=151.2

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCC--CcEEEe
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSP--DDVYLT  116 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~~  116 (319)
                      .+.|+|..+.      .++++.+.+++.+.+.......      |+...+..++++.+.+++.+.+|...+.  .+|+++
T Consensus        44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~  117 (483)
T 1rv3_A           44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  117 (483)
T ss_dssp             HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence            4689998776      2568999999988776532112      3333345678888888888877755222  347888


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH--------HhhCC--CeEEEEeccCCCCCcCCHHHHHhhhc-cCce
Q 020968          117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEAR--------ATHSH--LEVRHFDLLPAKGWEVDLDAVEALAD-ENTV  185 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~--------~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~  185 (319)
                      +|+ +++..++.+++++||+|+++++.|.++...        +...|  .+.+++++++ +++.+|++++++++. .+++
T Consensus       118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk  195 (483)
T 1rv3_A          118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK  195 (483)
T ss_dssp             SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence            887 888888999999999999999988765421        22334  4444444443 457899999999997 7889


Q ss_pred             EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       186 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +|++ +++|++ .+++   +++|.++|+++|+++++|++|. ++.+.+....++.     ...+++.|++|++  +|+|.
T Consensus       196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-----~~div~~s~~K~l--~Gprg  263 (483)
T 1rv3_A          196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-----HCHVVTTTTHKTL--RGCRA  263 (483)
T ss_dssp             EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-----TCSEEEEESSGGG--CCCSC
T ss_pred             EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-----CCcEEEecCcccC--CCCCc
Confidence            9988 888888 7766   8899999999999999999987 3443332222221     1238899999985  68899


Q ss_pred             eEEEeeCC
Q 020968          265 GWLVTSDP  272 (319)
Q Consensus       265 G~i~~~~~  272 (319)
                      ||++++++
T Consensus       264 G~i~~~~~  271 (483)
T 1rv3_A          264 GMIFYRRG  271 (483)
T ss_dssp             EEEEEECS
T ss_pred             eEEEEcch
Confidence            99999764

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.85  E-value=9.3e-21  Score=175.92  Aligned_cols=158  Identities=20%  Similarity=0.146  Sum_probs=130.9

Q ss_pred             CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEE
Q 020968           86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHF  161 (319)
Q Consensus        86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~  161 (319)
                      .+...+|++.+++++        ..+..++++++++|+..++.+++++||+|+++.|.|..+..    .+...|++++.+
T Consensus        81 ~p~~~~le~~lA~l~--------g~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v  152 (430)
T 3ri6_A           81 NPTVEDLEQRLKNLT--------GALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV  152 (430)
T ss_dssp             CHHHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred             CHHHHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence            345678999999888        23446777788899999999999999999999999988766    667899999988


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      +.+       |++++++++++++++|++++|+||+|.+++   +++|+++|+++|+++|+|++|....+.    .+. ..
T Consensus       153 ~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~~-~~  217 (430)
T 3ri6_A          153 DVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EAK-RL  217 (430)
T ss_dssp             CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CGG-GG
T ss_pred             CCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-Hc
Confidence            863       899999999989999999999999999976   889999999999999999999864321    111 11


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                         +..+++.|+||.++.+|..+|.+++
T Consensus       218 ---g~div~~S~sK~l~g~g~~~gG~vv  242 (430)
T 3ri6_A          218 ---GVDIEVLSSTKFISGGGTSVGGVLI  242 (430)
T ss_dssp             ---TCSEEEEECCCEEETTEEECCEEEE
T ss_pred             ---CCEEEEECCcccccCCCCceEEEEE
Confidence               2348999999999888877777766

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.85  E-value=4.6e-21  Score=173.56  Aligned_cols=183  Identities=16%  Similarity=0.125  Sum_probs=134.2

Q ss_pred             CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC--EEEEcCCCCcchHH---HHhhCC
Q 020968           81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEA---RATHSH  155 (319)
Q Consensus        81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd--~Vl~~~p~~~~~~~---~~~~~g  155 (319)
                      ..|+++.+..+|++++++++.        .+..++++|+++++..+++++.++||  .|+++.+.|..+..   .+...|
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~--------~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g  112 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLG--------MDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP  112 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred             ccccCChHHHHHHHHHHHHhC--------CCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence            468777788999999999983        23446668888999999999988888  67776666543322   456678


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc--cCCC
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDHL--AFGN  232 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~--~~~~  232 (319)
                      .+++.++.   +++.+|+++++++.  +++++++++|+||| |.+++.+++++|+++|+++|+++|+|++|...  .+.+
T Consensus       113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~  187 (357)
T 3lws_A          113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE  187 (357)
T ss_dssp             CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred             cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence            88887763   34579999999873  38899999999998 99999999999999999999999999998621  1112


Q ss_pred             CCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          233 TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       233 ~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      .....+.  ...+  +++.|+||+|+.++.  ||++++        ++++++++..+.
T Consensus       188 ~~~~~~~--~~~d--~~~~s~sK~~~~~~g--g~~~~~--------~~~~~~~~~~~~  231 (357)
T 3lws_A          188 KTAAEIA--GLFD--SIYISFYKGLGGIAG--AILAGP--------AAFCQTARIWKR  231 (357)
T ss_dssp             CCHHHHH--TTSS--EEEEESSSTTCCSSC--EEEEEC--------HHHHHHHHHHHH
T ss_pred             CChHHHH--hcCC--EEEEeccccCCCCce--EEEEcC--------HHHHHHHHHHHH
Confidence            1111111  1112  458899999844432  898874        357777776554

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.85  E-value=1.1e-20  Score=175.92  Aligned_cols=232  Identities=12%  Similarity=0.061  Sum_probs=151.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..+++|+.|.+.....+ .++.+.+++.+++.......|. .....++++.+++++    +   +.+++++++|+++|+
T Consensus        55 g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----~---~~~~v~~~~sgseA~  125 (434)
T 2epj_A           55 GARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAP-GEAEVLLAEKILGYV----K---RGGMIRFVNSGTEAT  125 (434)
T ss_dssp             CCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSC-CHHHHHHHHHHHHHH----C---TTCEEEEESSHHHHH
T ss_pred             CCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCC-CHHHHHHHHHHHHhC----C---CCCEEEEeCCHHHHH
Confidence            566889988864322222 6899999999988764322332 222344555555544    2   468999999999999


Q ss_pred             HHHHHH---hcCCCCEEEEcCCCCcchHHHHh--------------hCCC------eEEEEeccCCCCCcCCHHHHHhhh
Q 020968          124 EVILTV---LARPGANILLPRPGFPYYEARAT--------------HSHL------EVRHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       124 ~~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                      ..+++.   +. .+++|++.+|+|+.+...+.              ..|+      .+..++.       .|++.+++.+
T Consensus       126 ~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l  197 (434)
T 2epj_A          126 MTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVF  197 (434)
T ss_dssp             HHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHH
T ss_pred             HHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHH
Confidence            999987   44 45788888899977433221              1132      2344432       3889999888


Q ss_pred             cc---CceEEEEcCC-CCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          181 DE---NTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       181 ~~---~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      ++   ++++ ++++| +|++|.+. +.+.+++|.++|+++|+++|+||+|.++ ..+.. .....+.....   +.|+||
T Consensus       198 ~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK  271 (434)
T 2epj_A          198 AEYGDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGK  271 (434)
T ss_dssp             HHHGGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEG
T ss_pred             HhCCCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecc
Confidence            63   4444 45555 57799866 7999999999999999999999999987 32321 11111221122   248899


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      .++. |+|+||+++++        ++++.+...    ...+...+++++.++..++
T Consensus       272 ~l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l  318 (434)
T 2epj_A          272 IIGG-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATL  318 (434)
T ss_dssp             GGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHH
T ss_pred             hhcC-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHH
Confidence            9876 99999999853        466555441    1123356777877665543

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.85  E-value=1.9e-20  Score=173.20  Aligned_cols=215  Identities=16%  Similarity=0.137  Sum_probs=134.8

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC------CCcCCHHHHHHHHHHHhhhCCCCCCCCcE-EEeCC
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPARRAIADYLNRDLPYKLSPDDV-YLTLG  118 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~~~i-~~~~G  118 (319)
                      +.++|..+..      ..++.+.+++.+.+.......|+      .....+.+++...+.+.+..|    .+.. ++++|
T Consensus        33 ~~i~l~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~v~~~~  102 (425)
T 3ecd_A           33 SQVELIASEN------IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN----AGHANVQPHS  102 (425)
T ss_dssp             HSEECCTTCC------CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred             cceeeecccC------CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC----CCCceeecCc
Confidence            5678876652      34899999998887432111221      111111222222233433332    2334 45888


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcc---hHHHHhhCCC--eEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPY---YEARATHSHL--EVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p  192 (319)
                      +++|+..++.+++++||+|+++.|+|..   +.......|.  +.+.++.++ +++.+|++++++.+. .++++|++++|
T Consensus       103 Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~  181 (425)
T 3ecd_A          103 GAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGFS  181 (425)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred             hHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEccc
Confidence            9999999999999999999999999987   2222224454  444555432 457899999999986 57899999999


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||+.     .++++|.++|+++|+++|+|++|. ++.+.+..+..+..     ..++++|+||++  +|.|+||+++++
T Consensus       182 ~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-----~di~~~s~sK~l--~g~~~g~~~~~~  249 (425)
T 3ecd_A          182 AYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-----AHVVTSTTHKTL--RGPRGGFVLTND  249 (425)
T ss_dssp             CCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-----CSEEEEESSGGG--CCCSCEEEEESC
T ss_pred             cCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-----CcEEEecCCccc--CCCCcEEEEeCC
Confidence            99753     337899999999999999999954 33444432222211     128899999996  778999999864


Q ss_pred             CCCCccchHHHHHHHHhhh
Q 020968          272 PNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~  290 (319)
                      +       .+.+.+.....
T Consensus       250 ~-------~~~~~~~~~~~  261 (425)
T 3ecd_A          250 E-------EIAKKINSAVF  261 (425)
T ss_dssp             H-------HHHHHHHHHHC
T ss_pred             H-------HHHHHHHhhhC
Confidence            2       46666665443

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.85  E-value=1.9e-20  Score=176.30  Aligned_cols=204  Identities=18%  Similarity=0.195  Sum_probs=153.4

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .++.|+ +...     ...|.+.+++.+....  ++.|.+   ..|..++++++++++.+.+|..  . .+++++|++++
T Consensus        67 ~~~~lg-~~~~-----~~~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~-~~~~~~ggt~a  135 (474)
T 1wyu_B           67 TFYPLG-SCTM-----KYNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMD--A-ITLEPAAGAHG  135 (474)
T ss_dssp             SCCCBT-TTCC-----CCCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS--E-EECCCSSHHHH
T ss_pred             Cccccc-cccc-----cCCHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCC--c-eeecChHHHHH
Confidence            567888 5322     3335566666654221  234443   4556688888888887766643  2 46788999999


Q ss_pred             HHHHHHHh----cCCCC-----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968          123 IEVILTVL----ARPGA-----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG  193 (319)
Q Consensus       123 i~~~~~~l----~~~gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  193 (319)
                      +..++.++    .++||     +|+++.|.|..+...++..|++++.++.+  .++.+|+++|++++++++++|++++| 
T Consensus       136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p-  212 (474)
T 1wyu_B          136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP-  212 (474)
T ss_dssp             HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred             HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC-
Confidence            99866554    35787     99999999999999999999999999875  35679999999999888999999998 


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-c---ceeeEEEe
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-G---WRLGWLVT  269 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G---~r~G~i~~  269 (319)
                      ||+|.+.  +++++|+++|+++|+++|+|++|....++.   .....+   +..+++.|++|+|+.| |   .|+||+++
T Consensus       213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~~  284 (474)
T 1wyu_B          213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGV  284 (474)
T ss_dssp             CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred             CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccC---CCcEEEEeCccccccCCCCCCCCeEEEEE
Confidence            5899872  369999999999999999999998765421   122222   2458899999999877 4   59999998


Q ss_pred             eC
Q 020968          270 SD  271 (319)
Q Consensus       270 ~~  271 (319)
                      ++
T Consensus       285 ~~  286 (474)
T 1wyu_B          285 KA  286 (474)
T ss_dssp             CG
T ss_pred             cH
Confidence            65

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.85  E-value=3.5e-21  Score=179.01  Aligned_cols=241  Identities=16%  Similarity=0.069  Sum_probs=157.0

Q ss_pred             CCCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+..++||..|.....  ++ .+|.+.+++.+++.......| +.....+|++.+++++      . +.+++++++|+++
T Consensus        51 ~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~-~~~~v~~~~~Gse  120 (429)
T 3k28_A           51 DGNEYIDYVLSWGPLI--HGHANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIERV------P-SIEIVRMVNSGTE  120 (429)
T ss_dssp             TCCEEEESCGGGTTCT--TCBSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHS------T-TCSEEEEESSHHH
T ss_pred             CCCEEEECCCChhhcc--cCCCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHHhC------C-CCCEEEEeCChHH
Confidence            3667899998864321  33 589999999998876543333 4455667777777776      2 4689999999999


Q ss_pred             HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCc------------CCHHHHHhhhcc--Cc
Q 020968          122 AIEVILTVLAR--PGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWE------------VDLDAVEALADE--NT  184 (319)
Q Consensus       122 ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~------------~d~~~l~~~l~~--~~  184 (319)
                      ++..+++.+..  ++++|++..|+|+.+...+. ..|.....+......++.            -|++++++++..  ..
T Consensus       121 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  200 (429)
T 3k28_A          121 ATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDD  200 (429)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence            99999987754  66899999999976543322 222222211111111110            188999988862  23


Q ss_pred             eEEEEcCC-CCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968          185 VALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW  262 (319)
Q Consensus       185 ~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~  262 (319)
                      .+++++.| +|++|.+. +.+.+++|.++|+++|+++|+||+|.++ ..+.. .....+.....   +.++||.++ +|+
T Consensus       201 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~  274 (429)
T 3k28_A          201 IACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN-CGQGYYGVTPD---LTCLGKVIG-GGL  274 (429)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGG-TTS
T ss_pred             EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hHHHHhCCCCc---eehhhhhhc-CCC
Confidence            34445555 55566544 6777999999999999999999999987 54421 11111222222   347899986 599


Q ss_pred             eeeEEEeeCCCCCccchHHHHHHHHhh----hhcCCcchHHHHHHHHHH
Q 020968          263 RLGWLVTSDPNGILQDSGIVDSIKSFL----NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       263 r~G~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l  307 (319)
                      |+||+++++        ++++.+....    ..+.+.++++|.++..++
T Consensus       275 ~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal  315 (429)
T 3k28_A          275 PVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETL  315 (429)
T ss_dssp             CCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHH
T ss_pred             CeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHH
Confidence            999999853        4666654421    223467888888877655

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.85  E-value=2.6e-20  Score=175.47  Aligned_cols=247  Identities=16%  Similarity=0.128  Sum_probs=166.4

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|....... ..+|.+.+++.+++.....  +....+..+.+.++++++.+..+  .+.+++++++|+++|
T Consensus        52 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA  126 (476)
T 3i5t_A           52 DGRRLIDGPAGMWCAQVG-YGRREIVDAMAHQAMVLPY--ASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGSTA  126 (476)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCCC--CCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccC--cccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHHH
Confidence            356788888774221111 2479999999998876321  22224566888888888887654  345699999999999


Q ss_pred             HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHhhCCCe-------------EEEEeccCC-CCCcCC--------
Q 020968          123 IEVILTVLAR--------PGANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPA-KGWEVD--------  172 (319)
Q Consensus       123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~-~~~~~d--------  172 (319)
                      +..+++.+..        .+++|++..|.|+++...+...+..             +..++.... .++..+        
T Consensus       127 ~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  206 (476)
T 3i5t_A          127 VDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDL  206 (476)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHH
Confidence            9999998753        3579999999998876554433221             222221100 001122        


Q ss_pred             HHHHHhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc-ccCCCCC
Q 020968          173 LDAVEALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG-VFGSIVP  246 (319)
Q Consensus       173 ~~~l~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~~~  246 (319)
                      +++|++.+.    +++++|++..++|++|. +++.+.+++|.++|+++|+++|+||+|.++...|... ... .+.-.+.
T Consensus       207 ~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~pd  285 (476)
T 3i5t_A          207 VQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVPD  285 (476)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCcc
Confidence            678888775    34566666666788885 8888899999999999999999999999987665421 222 2222223


Q ss_pred             eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH
Q 020968          247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++   ++||.++. | +|+|+++++.        ++++.+...        ...+.+.++++|.++..++
T Consensus       286 i~---t~sK~l~~-G~~plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL  343 (476)
T 3i5t_A          286 II---TFAKGVTS-GYVPLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANI  343 (476)
T ss_dssp             EE---EECGGGGT-TSSCCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHH
T ss_pred             hh---hhhhhhcC-CCcCeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHH
Confidence            33   67899764 8 9999999853        577776643        1234566888888776655

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.85  E-value=3.2e-20  Score=172.24  Aligned_cols=232  Identities=13%  Similarity=0.101  Sum_probs=154.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..|.......+ .+|.+.+++.+++....  .|+   +..++++.+++.+.+.++   +.+++++++|+++|+
T Consensus        51 g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~  121 (424)
T 2e7u_A           51 GNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEAT  121 (424)
T ss_dssp             CCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHH
T ss_pred             CCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHH
Confidence            556889988864322223 68999999999987642  232   234556666666665543   568999999999999


Q ss_pred             HHHHHH---hcCCCCEEEEcCCCCcchHHHHh-h-------------CCC------eEEEEeccCCCCCcCCHHHHHhhh
Q 020968          124 EVILTV---LARPGANILLPRPGFPYYEARAT-H-------------SHL------EVRHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       124 ~~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                      ..+++.   +. .++.|++.+|+|+++...+. .             .|+      ++..++.       .|++.+++.+
T Consensus       122 ~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l  193 (424)
T 2e7u_A          122 MSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVL  193 (424)
T ss_dssp             HHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHH
T ss_pred             HHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHH
Confidence            999885   44 45789999999987543221 1             121      2333332       3889999888


Q ss_pred             cc--CceEEEEcCCCCc-ccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          181 DE--NTVALVIINPGNP-CGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       181 ~~--~~~~v~l~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                      ++  +..++++++|+|+ ||.+. +.+.+++|.++ +++|+++|+||+|.++ ..+.. .....+....++   .|+||+
T Consensus       194 ~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK~  267 (424)
T 2e7u_A          194 KRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLGKI  267 (424)
T ss_dssp             HHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEECGG
T ss_pred             HhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhhhh
Confidence            63  2345666778654 89765 78899999999 9999999999999987 33321 111112222223   389999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++ +|+|+||+++++        ++++.+...    ...+.+.++++|.++..++
T Consensus       268 l~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal  313 (424)
T 2e7u_A          268 LG-GGLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATL  313 (424)
T ss_dssp             GG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHH
T ss_pred             hh-CCcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHH
Confidence            87 599999999853        466655541    1123356778887766544

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.84  E-value=3.1e-21  Score=181.09  Aligned_cols=234  Identities=15%  Similarity=0.147  Sum_probs=156.9

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC--CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP--SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI   96 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   96 (319)
                      +++.+.++.+..+..+.. .++ ..+.++++|..|.+  +.....++ +.+.+++.+.+..+. ..|++..+..+||+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~-~~~-~~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~l   83 (467)
T 2oqx_A            8 RIRVIEPVKRTTRAYREE-AII-KSGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGD-EAYSGSRSYYALAESV   83 (467)
T ss_dssp             CCCCCCCCCCCCHHHHHH-HHH-HTTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHH
T ss_pred             heeeecccccccHHHHHH-HHH-HcCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCc-ceeccCchhHHHHHHH
Confidence            344555665544333222 111 23556666666654  11112333 677777777765443 3687777889999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC-----C----CEEEEcCCCCcchHHHHhhCCCeEEEEecc---
Q 020968           97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP-----G----ANILLPRPGFPYYEARATHSHLEVRHFDLL---  164 (319)
Q Consensus        97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~-----g----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~---  164 (319)
                      ++++        ..+++++|+|+++|+..+++++.++     |    |+|++..+.|..+.......|..+......   
T Consensus        84 a~~~--------~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~  155 (467)
T 2oqx_A           84 KNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAF  155 (467)
T ss_dssp             HHHH--------CCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTT
T ss_pred             HHHh--------CcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccc
Confidence            9998        2478999999999999999998887     8    998887544455555566667665543211   


Q ss_pred             -CC----CCCcCCHHHHHhhhc----cCceEEEEcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-------
Q 020968          165 -PA----KGWEVDLDAVEALAD----ENTVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH-------  227 (319)
Q Consensus       165 -~~----~~~~~d~~~l~~~l~----~~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-------  227 (319)
                       ..    .++.+|+++|+++++    +++++|++++|+||+ |.+++.+++++|.++|++||+++|+|+++..       
T Consensus       156 ~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~  235 (467)
T 2oqx_A          156 DTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIK  235 (467)
T ss_dssp             CTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHH
T ss_pred             cCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcc
Confidence             11    235689999999987    368899999999998 8999999999999999999999999976543       


Q ss_pred             ---ccCCCCCCCCCcccC----CCCCeEEEecCccccCCC-cceeeEEEeeC
Q 020968          228 ---LAFGNTPFVPMGVFG----SIVPVLTLGSISKRWIVP-GWRLGWLVTSD  271 (319)
Q Consensus       228 ---~~~~~~~~~~~~~~~----~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~  271 (319)
                         ..+.+.   +...+.    .... +++.|+||++++| |   ||+++++
T Consensus       236 ~~~~~~~g~---~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~~  280 (467)
T 2oqx_A          236 QREAEYKDW---TIEQITRETYKYAD-MLAMSAKKDAMVPMG---GLLCMKD  280 (467)
T ss_dssp             HHCGGGTTS---CHHHHHHHHGGGCS-EEEEESSSTTCCSSC---EEEEECS
T ss_pred             cccccccCc---cHHHHhhhhhccCC-eEEEecccccCCCCc---eEEEecC
Confidence               122232   121211    1111 4578999999877 5   7777754

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.84  E-value=9.8e-20  Score=167.70  Aligned_cols=184  Identities=18%  Similarity=0.194  Sum_probs=139.9

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-----hhCCCeEEEE
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA-----THSHLEVRHF  161 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~~  161 (319)
                      +...+|++.++++.        ..++.++++++++|+.. +..++++||+|+++.|.|.+....+     ...|.++..+
T Consensus        67 p~~~~l~~~la~l~--------g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v  137 (400)
T 3nmy_A           67 PTRFAYERCVAALE--------GGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV  137 (400)
T ss_dssp             HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE
T ss_pred             HHHHHHHHHHHHHh--------CCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE
Confidence            34567888888877        23467888888999998 5678899999999999998654443     3459999888


Q ss_pred             eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      +..       |++++++++++++++|++++|+||+|.+++   +++|.++|+++|+++|+|++|....+..    ++. +
T Consensus       138 ~~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~~-~  202 (400)
T 3nmy_A          138 DLT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR----PLS-L  202 (400)
T ss_dssp             CTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----GGG-G
T ss_pred             CCC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC----hhh-c
Confidence            762       899999999989999999999999999986   9999999999999999999998643321    111 1


Q ss_pred             CCCCCeEEEecCccccCCCcceeeE--EEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGW--LVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKS  304 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~--i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~  304 (319)
                         +..+++.|+||.++.+|.++|+  +++.+       +++.++++.... .....+++.++++.
T Consensus       203 ---g~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l  258 (400)
T 3nmy_A          203 ---GADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLAL  258 (400)
T ss_dssp             ---TCSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHH
T ss_pred             ---CCcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence               3459999999999999988877  44433       357777776554 33445555554433

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.84  E-value=4.4e-20  Score=173.65  Aligned_cols=248  Identities=13%  Similarity=0.072  Sum_probs=162.6

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|....... ..+|.+.+++.+++..... .|....+..+.+..+++.+.+..+  .+.++|++++|+++|
T Consensus        53 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA  128 (472)
T 3hmu_A           53 EGEEILDAMAGLWCVNIG-YGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEA  128 (472)
T ss_dssp             TCCEEECTTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHH
Confidence            356788888773221111 2479999999998876432 233333344566666666665443  356799999999999


Q ss_pred             HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHhhCCC------------eEEEEeccC--C-CCCcCC-------
Q 020968          123 IEVILTVLAR--------PGANILLPRPGFPYYEARATHSHL------------EVRHFDLLP--A-KGWEVD-------  172 (319)
Q Consensus       123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d-------  172 (319)
                      +..+++.+..        .+++|++..++|+++...+...+.            .+..++...  . .++ .|       
T Consensus       129 ~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~  207 (472)
T 3hmu_A          129 NDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLA  207 (472)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHH
Confidence            9999998864        468999999999887654443322            233444211  0 111 23       


Q ss_pred             -HHHHHhhhc----cCceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          173 -LDAVEALAD----ENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       173 -~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                       ++.|++.+.    +++++|++..+++++|.+. +.+.+++|.++|+++|+++|+||+|.+|...|.. .....+.....
T Consensus       208 ~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~-~a~~~~~v~pd  286 (472)
T 3hmu_A          208 RARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNW-FGTQTMGIRPH  286 (472)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCcc-chhHHhCCCCc
Confidence             678888775    3344555545567777654 8888999999999999999999999998665532 11222222223


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh---hhhcCCcchHHHHHHHHHH
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++   ++||+++.+|+|+||++++.        ++++.+...   ...+.+.++++|.++..++
T Consensus       287 i~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL  339 (472)
T 3hmu_A          287 IM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENL  339 (472)
T ss_dssp             EE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHH
T ss_pred             ee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHH
Confidence            33   57899877779999999853        577777311   1224566888888876655

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.84  E-value=5.8e-20  Score=172.52  Aligned_cols=206  Identities=10%  Similarity=0.058  Sum_probs=145.8

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhh----cCCC---CCCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR----SARF---NCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----~~~~---~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      ++.+.|+.+...     +.++.+.+++.+.+.    ....   ..|.+ .....++++.+++++      +.++++|++|
T Consensus        66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t  134 (465)
T 3e9k_A           66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALM  134 (465)
T ss_dssp             CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEEC
T ss_pred             CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEE
Confidence            467888887654     334444444444332    1111   11221 234467888888887      4467899999


Q ss_pred             CCHHHHHHHHHHHhcCCCC---EEEEcCCCCcch----HHHHhhCCCeEEE--Eecc-CCCCCcCCHHHHHhhhc---cC
Q 020968          117 LGCTQAIEVILTVLARPGA---NILLPRPGFPYY----EARATHSHLEVRH--FDLL-PAKGWEVDLDAVEALAD---EN  183 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd---~Vl~~~p~~~~~----~~~~~~~g~~~~~--~~~~-~~~~~~~d~~~l~~~l~---~~  183 (319)
                      +|+++++++++.++.++|+   +|+++.|+|++.    ...++..|+++..  +... .++++.+|+++++++++   ++
T Consensus       135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~  214 (465)
T 3e9k_A          135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS  214 (465)
T ss_dssp             SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred             CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence            9999999999999987655   599999999874    3466778887521  1111 23457789999999996   57


Q ss_pred             ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968          184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR  263 (319)
Q Consensus       184 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r  263 (319)
                      +++|++++|+||||.+++   +++|.++|+++|+++|+|++|+.    +..+..+...   +..+++.|++|.++.+..+
T Consensus       215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~----g~~~~~~~~~---~~D~~~~s~~K~l~~gp~~  284 (465)
T 3e9k_A          215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV----GNVELYLHDW---GVDFACWCSYKYLNAGAGG  284 (465)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHH---TCCEEEECSSSTTCCCTTC
T ss_pred             eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCchhhc---CCCEEEECcccccccCCCc
Confidence            889999999999999987   78899999999999999999985    2222222222   2348899999998433337


Q ss_pred             eeEEEeeC
Q 020968          264 LGWLVTSD  271 (319)
Q Consensus       264 ~G~i~~~~  271 (319)
                      +|++++.+
T Consensus       285 ~g~l~~~~  292 (465)
T 3e9k_A          285 IAGAFIHE  292 (465)
T ss_dssp             CCEEEECG
T ss_pred             eEEEEEcH
Confidence            89988754

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.84  E-value=1e-19  Score=168.73  Aligned_cols=158  Identities=22%  Similarity=0.184  Sum_probs=129.5

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEE-e
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHF-D  162 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~-~  162 (319)
                      ...++++.+++++..        +..++++++++|+..++.+++++||+|+++.+.|..+...+    +..|+++..+ +
T Consensus        59 ~~~~l~~~la~~~g~--------~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  130 (421)
T 2ctz_A           59 TVDVLEKRLAALEGG--------KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHhCC--------CceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence            357899999999832        23455566699999999999999999999999998876554    7789998887 5


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCC-CCccCCCCCCCCCccc
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPFVPMGVF  241 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~  241 (319)
                      .+       |++++++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| +.. +.+.   ++ ..
T Consensus       131 ~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~  195 (421)
T 2ctz_A          131 EE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AW  195 (421)
T ss_dssp             TC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GG
T ss_pred             CC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-cc
Confidence            42       899999999988999999999999999987   899999999999999999999 532 2221   11 12


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                         ...+++.|++|.++.+|.|+|++++.+
T Consensus       196 ---~~Di~~~s~~K~l~~~g~~~G~~~~~~  222 (421)
T 2ctz_A          196 ---GAALVTHSLTKWVGGHGAVIAGAIVDG  222 (421)
T ss_dssp             ---TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred             ---CCeEEEECCcccccCCCCcEEEEEEec
Confidence               234999999999999999999998863

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.83  E-value=1.4e-19  Score=171.89  Aligned_cols=202  Identities=8%  Similarity=-0.004  Sum_probs=158.4

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----------
Q 020968           63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----------  132 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~----------  132 (319)
                      ++..+.+.+...+.... ..|...++..++++.+++++.+.+|...+.+.+++|+|+++|+..++.++.+          
T Consensus       108 ~~~~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G  186 (511)
T 3vp6_A          108 IIGLAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG  186 (511)
T ss_dssp             HHHHHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred             HHHHHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence            34445566666665543 4787778889999999999999888776677999999999999988877654          


Q ss_pred             ----CCCEEEEcCCCCcchHHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhccC------ceEEEEcCCCCccccc
Q 020968          133 ----PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADEN------TVALVIINPGNPCGNV  199 (319)
Q Consensus       133 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~  199 (319)
                          +++.|+++.+.|.++...++..|+   +++.++.+  .++.+|+++|++++++.      +++|++++++||+|.+
T Consensus       187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v  264 (511)
T 3vp6_A          187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF  264 (511)
T ss_dssp             GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred             cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence                467899999999999999999998   88888875  35789999999998754      7889999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCC
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN  273 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~  273 (319)
                         +++++|+++|+++|+++++|++|+.......... .+....  .-.+++.+.+|+++.| ..+|++++.++.
T Consensus       265 ---d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~l~~~~~~  333 (511)
T 3vp6_A          265 ---DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG  333 (511)
T ss_dssp             ---CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT
T ss_pred             ---ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEEEEEeCHH
Confidence               5699999999999999999999997554221111 111111  1236778999998776 678999987653

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.83  E-value=8.4e-20  Score=170.66  Aligned_cols=214  Identities=15%  Similarity=0.088  Sum_probs=145.5

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC---cCCHHHH--HHHH-HHHhhhCCCCCCCCcEEE-eCC
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST---VGILPAR--RAIA-DYLNRDLPYKLSPDDVYL-TLG  118 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~~~~~~g~~~~~~~i~~-~~G  118 (319)
                      +.|+|..+. +     +.++.+.+++.+.+.......|+..   .|...++  ++++ +++.+.+|.    +.+.+ ++|
T Consensus        46 ~~i~l~~~~-~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~----~~~~v~~~s  115 (447)
T 3h7f_A           46 DTLEMIASE-N-----FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGA----EFANVQPHS  115 (447)
T ss_dssp             HSEECCTTC-C-----CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC----SEEECCCSS
T ss_pred             CceeEecCC-C-----CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCC----CceEEEeCC
Confidence            678886544 2     3489999999887753222233321   2444433  4444 555544442    23444 788


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchH-H--H--HhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYYE-A--R--ATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~-~--~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p  192 (319)
                      +++|+..++.+++++||+|+++.|+|..+. .  .  ....+..+++++.++ +++.+|++++++++. .+++++++++|
T Consensus       116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~  194 (447)
T 3h7f_A          116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS  194 (447)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred             HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence            899999999999999999999999987621 1  1  112344556666543 346799999999885 46788888899


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||++.     ++++|.++|+++|+++|+|++|. ++.+.+..+.++   ..  ..+++.|+||++  +|+|.||+++++
T Consensus       195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~~--~di~~~s~sK~l--~G~~gG~i~~~~  262 (447)
T 3h7f_A          195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---PH--ADVVSTTVHKTL--GGGRSGLIVGKQ  262 (447)
T ss_dssp             SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---TT--CSEEEEESSGGG--CCCSCEEEEECG
T ss_pred             CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---CC--CcEEEecCCcCC--CCCCeEEEEECH
Confidence            999887     48999999999999999999975 344444322222   11  138899999996  588999999854


Q ss_pred             CCCCccchHHHHHHHHhhh
Q 020968          272 PNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~  290 (319)
                              ++++.+.....
T Consensus       263 --------~~~~~l~~~~~  273 (447)
T 3h7f_A          263 --------QYAKAINSAVF  273 (447)
T ss_dssp             --------GGHHHHHHHHT
T ss_pred             --------HHHHHHhhhcC
Confidence                    36666665543

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.83  E-value=3.7e-20  Score=172.00  Aligned_cols=241  Identities=12%  Similarity=0.038  Sum_probs=147.4

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++||..+...... -..+|.+.+++.+++.......| +.....+|++.+++++    +   ..+++++++|+++|+
T Consensus        52 g~~ylD~~~~~~~~~l-G~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea~  122 (429)
T 4e77_A           52 GKAYIDYVGSWGPMIL-GHNHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEAT  122 (429)
T ss_dssp             CCEEEESSGGGTTCTT-CBTCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHS----T---TCSEEEEESSHHHHH
T ss_pred             CCEEEECCCchhcccc-CCCCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHHH
Confidence            5678888887643111 12579999999998876543234 3333345555555544    2   478999999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCC------------cCCHHHHHhhhcc--CceE
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGW------------EVDLDAVEALADE--NTVA  186 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~--~~~~  186 (319)
                      ..+++...  ..++.|++..+.|+++...+. ..+.....+......++            ..|++++++++++  ...+
T Consensus       123 ~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~  202 (429)
T 4e77_A          123 MSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVA  202 (429)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEE
T ss_pred             HHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEE
Confidence            99998543  356789999999977543211 11111110000000000            1288999998863  2345


Q ss_pred             EEEcCCCCccc-cc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          187 LVIINPGNPCG-NV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       187 v~l~~p~nptG-~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +++++|+|++| .+ .+.+.+++|.++|+++|+++|+||+|.++ ..+.. .....+.....+   .|+||.++ +|+|+
T Consensus       203 ~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~~~  276 (429)
T 4e77_A          203 CIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPDL---TCLGKIIG-GGMPV  276 (429)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCSE---EEEEGGGG-TTSCC
T ss_pred             EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCCe---eeeccccc-CCCCe
Confidence            66677866554 43 33455999999999999999999999988 44432 112222222222   48999987 79999


Q ss_pred             eEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968          265 GWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l  307 (319)
                      ||++++.        ++++.+...    ...+.+.+++++.++..++
T Consensus       277 G~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal  315 (429)
T 4e77_A          277 GAFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACL  315 (429)
T ss_dssp             EEEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHH
T ss_pred             EEEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHH
Confidence            9998843        466665542    2223456788887766644

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.83  E-value=2.6e-19  Score=169.82  Aligned_cols=195  Identities=8%  Similarity=-0.013  Sum_probs=148.5

Q ss_pred             HHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC--------CC-----C
Q 020968           69 DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR--------PG-----A  135 (319)
Q Consensus        69 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~--------~g-----d  135 (319)
                      +.+........ ..|...++..++++.+.+++.+.+|...+.+++++|+|+++|+..++.++..        +|     +
T Consensus       111 ~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~  189 (504)
T 2okj_A          111 EWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK  189 (504)
T ss_dssp             HHHHHHHCCBS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred             HHHHHhhccCC-CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence            44444443332 3566555667788888787777766554477999999999999999988753        56     6


Q ss_pred             -EEEEcCCCCcchHHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHH
Q 020968          136 -NILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHL  205 (319)
Q Consensus       136 -~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l  205 (319)
                       .|+++.+.|..+...++..|.   +++.++.+  .++.+|+++|++++++      ++++|++++|+||||.+.   ++
T Consensus       190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~---~l  264 (504)
T 2okj_A          190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD---PI  264 (504)
T ss_dssp             EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC---CH
T ss_pred             eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC---CH
Confidence             788999999999999998887   78888874  4578999999999865      478899999999999995   48


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCC-CCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ++|+++|+++|+++++|++|+.+....... ..+..+.  ...+++.|++|+++.| .++|++++.++
T Consensus       265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~  329 (504)
T 2okj_A          265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEK  329 (504)
T ss_dssp             HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESST
T ss_pred             HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECH
Confidence            999999999999999999999876532221 1111111  1237788999998766 68999999764

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.83  E-value=3.9e-19  Score=168.41  Aligned_cols=231  Identities=13%  Similarity=0.053  Sum_probs=169.7

Q ss_pred             cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCC
Q 020968           27 TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY  106 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~  106 (319)
                      ....++..+...+... +.+.+++..-.+     ..+++.+.+++.+.+..... .|...++..++++.+.+++.+.+|.
T Consensus        38 ~~~~~~~~~~~~i~l~-gnp~~~l~s~~t-----~~~~~~v~~~l~~~~~~~~~-~~~~~p~~~~le~~~~~~la~l~g~  110 (502)
T 3hbx_A           38 PKEAAYQIINDELMLD-GNPRLNLASFVT-----TWMEPECDKLIMSSINKNYV-DMDEYPVTTELQNRCVNMIAHLFNA  110 (502)
T ss_dssp             CHHHHHHHHHHHGGGS-CCGGGBTTCCSC-----CCCCHHHHHHHHHTTTCBTT-CTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHhccC-CCCCceeccccC-----CCCCHHHHHHHHHHhccCCC-ChhcChhHHHHHHHHHHHHHHHhCC
Confidence            3455665555554333 233334433111     35678899999887765432 3444455678888888888888887


Q ss_pred             CCCCCcEE---EeCCHHHHHHHHHHHhcCC--------CC-----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968          107 KLSPDDVY---LTLGCTQAIEVILTVLARP--------GA-----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE  170 (319)
Q Consensus       107 ~~~~~~i~---~~~G~t~ai~~~~~~l~~~--------gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  170 (319)
                      ..++++++   +|+|+++++..++.++..+        |+     .|+++.+.|..+...++..|++++.++.++ +++.
T Consensus       111 ~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~  189 (502)
T 3hbx_A          111 PLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYV  189 (502)
T ss_dssp             CCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCS
T ss_pred             CcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCc
Confidence            64455544   5999999999998887654        76     899999999999999999999999999754 4478


Q ss_pred             CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc------CCEEEEeCCCCCccC---CCCCCCCCccc
Q 020968          171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL------GIMVIADEVYDHLAF---GNTPFVPMGVF  241 (319)
Q Consensus       171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~D~a~~~~~~---~~~~~~~~~~~  241 (319)
                      +|++++++++++++++|++++|+||||.+.+   +++|.++|+++      |+++++|++|+.+..   .+.....+   
T Consensus       190 ~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~---  263 (502)
T 3hbx_A          190 MDPQQAVDMVDENTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF---  263 (502)
T ss_dssp             CCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---
T ss_pred             CCHHHHHHHHhhCCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc---
Confidence            9999999999999999999999999999955   88888899988      999999999997641   22111111   


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ....-.++..|.+|. +..+.++||+++.++
T Consensus       264 ~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~  293 (502)
T 3hbx_A          264 RLPLVKSINVSGHKY-GLVYAGIGWVIWRNK  293 (502)
T ss_dssp             TSTTEEEEEEETTTT-TCCCSSCEEEEESSG
T ss_pred             CCCCceEEEECcccc-cCCCCCeEEEEEeCH
Confidence            111224777899998 567788999988653

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.81  E-value=2.5e-19  Score=169.18  Aligned_cols=200  Identities=10%  Similarity=0.078  Sum_probs=152.3

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEeCCHHHHHHHHHHHhcCC--
Q 020968           63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-------PDDVYLTLGCTQAIEVILTVLARP--  133 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~~~G~t~ai~~~~~~l~~~--  133 (319)
                      ++..+.+++...+.... ..|...++..++++.+++++.+.+|...+       ...+++|+|+|+|+..++.++...  
T Consensus        86 ~~~~~~~~~~~~~n~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~  164 (486)
T 1js3_A           86 YPAMLADMLCGAIGCIG-FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV  164 (486)
T ss_dssp             HHHHHHHHHHHHHCCCC-SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCc-cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHh
Confidence            44557777777765433 35666666789999999999888876532       356899999999999888765321  


Q ss_pred             -------CC--------E--EEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc------eEEEEc
Q 020968          134 -------GA--------N--ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT------VALVII  190 (319)
Q Consensus       134 -------gd--------~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~l~  190 (319)
                             ||        .  |+++.+.|..+...++..|++++.++.+  .++.+|+++|++++++++      .+|+++
T Consensus       165 ~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~  242 (486)
T 1js3_A          165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT  242 (486)
T ss_dssp             HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEe
Confidence                   42        3  7789999999999999999999999874  467899999999997644      388899


Q ss_pred             CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      +|+||||.+   +++++|+++|+++|+++++|++|+.+.+....... +..+.. . ..++.+++|+++.| +++|++++
T Consensus       243 ~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~-a-dsi~~~~hK~~~~p-~~~G~l~~  316 (486)
T 1js3_A          243 LGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF-A-DSFNFNPHKWLLVN-FDCSAMWV  316 (486)
T ss_dssp             BSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG-C-SEEEECHHHHSSCC-SSCEEEEE
T ss_pred             CCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc-c-CeeEEchhhhcCCC-cceEEEEE
Confidence            999999998   56999999999999999999999976532211111 111111 1 25567899998776 89999998


Q ss_pred             eC
Q 020968          270 SD  271 (319)
Q Consensus       270 ~~  271 (319)
                      ++
T Consensus       317 ~~  318 (486)
T 1js3_A          317 KR  318 (486)
T ss_dssp             SC
T ss_pred             eC
Confidence            65

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.81  E-value=3.6e-19  Score=164.35  Aligned_cols=205  Identities=15%  Similarity=0.101  Sum_probs=130.3

Q ss_pred             CcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCE
Q 020968           63 TASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN  136 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~  136 (319)
                      .++.+.+++.+.+......      .|+.....+.+++...+.+.+.+|  .+++++++++| ++++..++.+++++||+
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~  118 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT  118 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence            5899999998887432211      222233334445444344444333  35556656655 88999999999999999


Q ss_pred             EEEcCCCCcchH---HHHhhCC--CeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHH
Q 020968          137 ILLPRPGFPYYE---ARATHSH--LEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAE  210 (319)
Q Consensus       137 Vl~~~p~~~~~~---~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~  210 (319)
                      |+++.|+|..+.   ......|  ...+.++.+  .++.+|++++++++++ ++++|++++|+||+  ..+   +++|.+
T Consensus       119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~  191 (420)
T 3gbx_A          119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMRE  191 (420)
T ss_dssp             EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHH
T ss_pred             EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHH
Confidence            999999997633   2222233  344445443  5567999999999876 58999999999874  433   889999


Q ss_pred             HHHHcCCEEEEeCCCCCc-cCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          211 TAKKLGIMVIADEVYDHL-AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       211 ~~~~~~~~li~D~a~~~~-~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      +|+++|+++|+||+|... .+.+..+..+.     ...++++|+||+++  |.+.||+++++.-     .++.+.+....
T Consensus       192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~  259 (420)
T 3gbx_A          192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAV  259 (420)
T ss_dssp             HHHHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHH
T ss_pred             HHHHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhc
Confidence            999999999999998643 33332222211     13489999999974  5556999986420     13666665543

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.81  E-value=9.5e-19  Score=165.67  Aligned_cols=201  Identities=14%  Similarity=0.125  Sum_probs=149.7

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh----c------
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL----A------  131 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l----~------  131 (319)
                      +.++.+.+++...........|...+...++++.+.+++.+.+|.. ..+.+++|+|+++|+..++.+.    .      
T Consensus       111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~  189 (497)
T 2qma_A          111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH  189 (497)
T ss_dssp             CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence            5667777777554433333345555566788888888888777653 3378999999999999988873    2      


Q ss_pred             ---CC------CC-EEEEcCCCCcchHHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhccC----c--eEEEEcCC
Q 020968          132 ---RP------GA-NILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADEN----T--VALVIINP  192 (319)
Q Consensus       132 ---~~------gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~----~--~~v~l~~p  192 (319)
                         ++      |+ .|+++.+.|.++...++..|.   +++.++.+  .++.+|+++|++++++.    +  .+|+++++
T Consensus       190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~  267 (497)
T 2qma_A          190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG  267 (497)
T ss_dssp             CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence               12      46 788999999999999988877   78888875  45789999999988653    3  37888899


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +||||.+   .++++|+++|+++|+++++|++|+.+..... ... +..+.  ...+++.|++|+++.| .++|++++.+
T Consensus       268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~  340 (497)
T 2qma_A          268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVND  340 (497)
T ss_dssp             CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESC
T ss_pred             CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeC
Confidence            9999998   4589999999999999999999998765322 111 11121  2237788999997776 6999999876


Q ss_pred             C
Q 020968          272 P  272 (319)
Q Consensus       272 ~  272 (319)
                      +
T Consensus       341 ~  341 (497)
T 2qma_A          341 K  341 (497)
T ss_dssp             G
T ss_pred             H
Confidence            4

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.80  E-value=1.5e-19  Score=169.02  Aligned_cols=239  Identities=12%  Similarity=0.064  Sum_probs=149.3

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHH-H-HHHH---HhhcCCCCCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAV-D-AIVH---SVRSARFNCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~-~-a~~~---~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      +..++||..|.......+ .+|.+. + ++.+   ++....  .|++   .....++++.+++++    + ..+.++|++
T Consensus        53 g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~~  124 (449)
T 2cjg_A           53 GRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLFF  124 (449)
T ss_dssp             CCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEEE
T ss_pred             CcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEEE
Confidence            344677766653211112 378999 8 9988   766532  2332   112344555555554    2 246789999


Q ss_pred             eCCHHHHHHHHHHHhc---C-----------CCCEEEEcCCCCcchHHHH-hhC--------CC-----eEEEEeccCCC
Q 020968          116 TLGCTQAIEVILTVLA---R-----------PGANILLPRPGFPYYEARA-THS--------HL-----EVRHFDLLPAK  167 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l~---~-----------~gd~Vl~~~p~~~~~~~~~-~~~--------g~-----~~~~~~~~~~~  167 (319)
                      ++|+++|++.+++.+.   +           +|++|++..|.|+++...+ ...        +.     ++..++.+...
T Consensus       125 ~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  204 (449)
T 2cjg_A          125 VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPG  204 (449)
T ss_dssp             ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTT
T ss_pred             eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCch
Confidence            9999999999987543   2           2899999999998754322 111        22     34444442200


Q ss_pred             CC--------cCCHHHHHhhhc---cCceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968          168 GW--------EVDLDAVEALAD---ENTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF  235 (319)
Q Consensus       168 ~~--------~~d~~~l~~~l~---~~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~  235 (319)
                      ..        ..+++.+++.++   +++++|++..++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+.. 
T Consensus       205 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~-  283 (449)
T 2cjg_A          205 LDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTA-  283 (449)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-
T ss_pred             hhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcc-
Confidence            01        135566888884   4556655444478999 5999999999999999999999999999987665532 


Q ss_pred             CCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH-----H-hhhhcCCcchHHHHHHHHHH
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK-----S-FLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ..+..+.-...++   ++||.+     |+||+++++        ++++.+.     . ....+.+.++++|.++..++
T Consensus       284 ~~~~~~~~~~di~---t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal  345 (449)
T 2cjg_A          284 WAYQQLDVAPDIV---AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRIL  345 (449)
T ss_dssp             STHHHHTCCCSEE---EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHH
T ss_pred             eeecccCCCceEE---EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHH
Confidence            1222222222233   789996     799999864        2444311     1 11224456788888776655

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.80  E-value=2.3e-18  Score=163.67  Aligned_cols=181  Identities=11%  Similarity=0.050  Sum_probs=139.6

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-------C-CCC------EEEEcCCCCcch
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-------R-PGA------NILLPRPGFPYY  147 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-------~-~gd------~Vl~~~p~~~~~  147 (319)
                      .|...++..++++.+.+++.+..|.  +.+++++|+|+|+|+..++.++.       + +|+      .|+++.+.|..+
T Consensus       139 ~~~~s~~~~~le~~~~~~la~l~g~--~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~  216 (515)
T 2jis_A          139 TYEIAPVFVLMEEEVLRKLRALVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSI  216 (515)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHTC--SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred             chhhchHHHHHHHHHHHHHHHHhCC--CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHH
Confidence            5655556566666666666665554  36789999999999998888763       2 575      889999999999


Q ss_pred             HHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCE
Q 020968          148 EARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM  218 (319)
Q Consensus       148 ~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~  218 (319)
                      ...++..|.   +++.++.+  .++.+|+++|++++++      ++++|++++|+||||.+.+   +++|+++|+++|++
T Consensus       217 ~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~~  291 (515)
T 2jis_A          217 QKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGLW  291 (515)
T ss_dssp             HHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCE
T ss_pred             HHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCCe
Confidence            999998888   88888875  3578999999999865      4789999999999999955   89999999999999


Q ss_pred             EEEeCCCCCccCCCCCCC-CCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          219 VIADEVYDHLAFGNTPFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       219 li~D~a~~~~~~~~~~~~-~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      +++|++|+.+........ .+..+.  ...+++.|++|+++.| .++|++++.++
T Consensus       292 l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~  343 (515)
T 2jis_A          292 LHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDT  343 (515)
T ss_dssp             EEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCC
T ss_pred             EEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeCh
Confidence            999999998765322111 121111  2238888999997655 57999999764

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.79  E-value=4.9e-19  Score=165.35  Aligned_cols=170  Identities=15%  Similarity=0.128  Sum_probs=127.0

Q ss_pred             CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEe
Q 020968           83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFD  162 (319)
Q Consensus        83 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~  162 (319)
                      |.+.....++++.+++ +.      .+ +++++++|+++++.+++++++++||+|+++.|+|..+...+...|++++.++
T Consensus        53 ~~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~  124 (446)
T 2x3l_A           53 HHPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIE  124 (446)
T ss_dssp             TSCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECE
T ss_pred             cCcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEe
Confidence            3444456677777777 62      23 6899999999999999999999999999999999999999999999999888


Q ss_pred             ccCCCC----CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCC
Q 020968          163 LLPAKG----WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVP  237 (319)
Q Consensus       163 ~~~~~~----~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~  237 (319)
                      ...+.+    +.+|++.+   +.++++++++++ .|++|.+++   +++|+++|+++|+++|+|++|+. +.|.+. +..
T Consensus       125 ~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~  196 (446)
T 2x3l_A          125 THQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDS  196 (446)
T ss_dssp             EEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCC
T ss_pred             CeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCC
Confidence            732232    46787877   456788999999 455999987   88999999999999999999996 434443 233


Q ss_pred             CcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ......   .+++.|+||++ .++.++||++++++
T Consensus       197 ~~~~g~---Di~~~S~~K~l-~~~~g~g~l~~~~~  227 (446)
T 2x3l_A          197 TLNYQA---DYVVQSFHKTL-PALTMGSVLYIHKN  227 (446)
T ss_dssp             GGGGTC---SEEEECHHHHS-SSCTTCEEEEEETT
T ss_pred             hHHcCC---CEEEECCcccc-ccccccEEEEEcCC
Confidence            333332   39999999963 33345899998764

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.79  E-value=7.9e-18  Score=154.26  Aligned_cols=148  Identities=14%  Similarity=0.208  Sum_probs=125.9

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-------cCCC
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-------ARPG  134 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-------~~~g  134 (319)
                      ..++.+.+++.+.+...   .|.+..+..++|+++++++..        +++++++++++|+..++.++       .++|
T Consensus        12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g   80 (390)
T 3b8x_A           12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFGS--------KYAVMVSSGSTANLLMIAALFFTKKPRLKKG   80 (390)
T ss_dssp             CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHTC--------SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred             CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHCC--------CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence            56788889998887652   455667889999999999932        36788888889999999998       7889


Q ss_pred             CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968          135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK  214 (319)
Q Consensus       135 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  214 (319)
                      |+|+++.|+|..+...++..|.+++.++.+++ ++.+|++++++++++++++|++++   ++|..   .++++|.++|++
T Consensus        81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~  153 (390)
T 3b8x_A           81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG  153 (390)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence            99999999999999999999999999998653 478999999999988888888875   45555   459999999999


Q ss_pred             cCCEEEEeCCCCC
Q 020968          215 LGIMVIADEVYDH  227 (319)
Q Consensus       215 ~~~~li~D~a~~~  227 (319)
                      +|+++|+|++|+.
T Consensus       154 ~~~~li~D~a~~~  166 (390)
T 3b8x_A          154 RDIILLEDNCESM  166 (390)
T ss_dssp             SCCEEEEECTTCT
T ss_pred             cCCEEEEECcCcc
Confidence            9999999999995

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.78  E-value=1.8e-18  Score=158.96  Aligned_cols=210  Identities=11%  Similarity=0.064  Sum_probs=138.8

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHH----HHHHHHHhhhCCCCCCCCcEE
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPAR----RAIADYLNRDLPYKLSPDDVY  114 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr----~~ia~~~~~~~g~~~~~~~i~  114 (319)
                      +.+++++.++|       .++.+.+++.+.+.......      |.......+++    +++++++    |  .+++.++
T Consensus        24 ~~~~~~~~~~~-------~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g--~~~~~i~   90 (405)
T 2vi8_A           24 AKIELIASENF-------VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----G--AEHANVQ   90 (405)
T ss_dssp             HSEECCTTCCC-------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEECC
T ss_pred             cceeeccCccc-------CCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceEEE
Confidence            45677755542       28999999988875221111      22212234555    4666665    3  2333344


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-H--HhhCC--CeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEE
Q 020968          115 LTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA-R--ATHSH--LEVRHFDLLPAKGWEVDLDAVEALADE-NTVALV  188 (319)
Q Consensus       115 ~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~  188 (319)
                      +++| ++++..++.+++++||+|+++.|+|..+.. .  +...|  .+++.++.++ .++.+|++++++.+++ ++++++
T Consensus        91 ~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~  168 (405)
T 2vi8_A           91 PHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIV  168 (405)
T ss_dssp             CSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEE
T ss_pred             ecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEE
Confidence            4555 999999999999999999999999987642 1  12233  3666666542 4578999999999875 778777


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC-CCCCCCCCcccCCCCCeEEEecCccccC-CCcceeeE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGW  266 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G~r~G~  266 (319)
                      + +|+|. |...   ++++|.++|+++|+++|+|++|..... .+...   ..+..  ..++++|+||+++ .+|   ||
T Consensus       169 ~-~~~~~-~~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~--~di~~~s~sK~~~g~~g---G~  235 (405)
T 2vi8_A          169 A-AAAAY-PRII---DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPY--AHFVTTTTHKTLRGPRG---GM  235 (405)
T ss_dssp             E-CCSSC-CSCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTT--CSEEEEESSSTTCCCSC---EE
T ss_pred             E-eCCCC-CccC---CHHHHHHHHHHcCCEEEEEccccccccccCcCC---Ccccc--CCEEEEeccccCCCCCC---eE
Confidence            6 45443 4443   389999999999999999999995322 22111   11211  2388999999987 556   99


Q ss_pred             EEeeCCCCCccchHHHHHHHHhhh
Q 020968          267 LVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       267 i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      ++++.        +++++++....
T Consensus       236 ~~~~~--------~~~~~l~~~~~  251 (405)
T 2vi8_A          236 ILCQE--------QFAKQIDKAIF  251 (405)
T ss_dssp             EEECH--------HHHHHHHHHHT
T ss_pred             EEEcH--------HHHHHHHhhhc
Confidence            99852        57777776543

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.77  E-value=5.6e-18  Score=155.71  Aligned_cols=200  Identities=12%  Similarity=0.047  Sum_probs=129.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC-CCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEE-eCCH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA-RFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYL-TLGC  119 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-~~G~  119 (319)
                      .+.+++|+.|.      .++++.+.+++.+..... ....+.+.  ....++|+.+++++    |.. ++++|++ |+|+
T Consensus        38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~~t~g~  106 (398)
T 2fyf_A           38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVILGNGGA  106 (398)
T ss_dssp             SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEEEETCH
T ss_pred             ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEeCCch
Confidence            45677777664      367888988887631110 11122221  12344555555554    433 3468998 9999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHhhC--CCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968          120 TQAIEVILTVLARPGANILLPRPGFPY-YEARATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC  196 (319)
Q Consensus       120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt  196 (319)
                      ++++++++++++++| .+++..+.|.. ....+...  |.+++.++.+  .++..+.     .+++++++|++++|+|||
T Consensus       107 t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~npt  178 (398)
T 2fyf_A          107 TAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETST  178 (398)
T ss_dssp             HHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTT
T ss_pred             hHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCc
Confidence            999999999998887 23333333321 12245555  7888888875  3333332     245678999999999999


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCc
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL  276 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~  276 (319)
                      |.+++.+++.++      +|+++|+|++|..+..    +..+.     +..+++.|+||+++.+| ++||+++++     
T Consensus       179 G~~~~~~~i~~~------~~~~vivD~a~~~~~~----~~~~~-----~~di~~~s~sK~~~~~g-g~g~l~~~~-----  237 (398)
T 2fyf_A          179 GVAVAVRRPEGS------DDALVVIDATSGAGGL----PVDIA-----ETDAYYFAPQKNFASDG-GLWLAIMSP-----  237 (398)
T ss_dssp             TEECCCCCCTTC------C-CEEEEECTTTTTTS----CCCGG-----GCSEEEECTTSTTCSCS-SEEEEEECH-----
T ss_pred             ceecchHHhhhh------cCCeEEEEeccccCCc----ccCcc-----cCcEEEEecCcccCCCC-ceEEEEECH-----
Confidence            999986666554      7999999999987432    11221     12488999999998886 599998853     


Q ss_pred             cchHHHHHHH
Q 020968          277 QDSGIVDSIK  286 (319)
Q Consensus       277 ~~~~~~~~~~  286 (319)
                         +++++++
T Consensus       238 ---~~~~~l~  244 (398)
T 2fyf_A          238 ---AALSRIE  244 (398)
T ss_dssp             ---HHHHHHH
T ss_pred             ---HHHHHhh
Confidence               4666654

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.76  E-value=2.5e-18  Score=161.07  Aligned_cols=182  Identities=13%  Similarity=0.084  Sum_probs=132.3

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH-HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCT-QAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLP  165 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t-~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  165 (319)
                      ..++.+.+.+++.+.+|..  .+ +++|+|+| .++..++.++..  +|+.|+++.+.|..+...++..|++++.++..+
T Consensus       131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~  207 (456)
T 2z67_A          131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL  207 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence            3455566666666666543  34 99999999 566555655443  678899999999999999999999999888643


Q ss_pred             -CCCCcCCHHHHHhhh-c----cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc
Q 020968          166 -AKGWEVDLDAVEALA-D----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       166 -~~~~~~d~~~l~~~l-~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                       ++++.+|++++++++ +    .++.+|++++|+||||.+.+   +++|.++|+++|+++++|++|+.+..+-. +....
T Consensus       208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~-~~~~~  283 (456)
T 2z67_A          208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYL-EKLKK  283 (456)
T ss_dssp             ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHH-HHHHH
T ss_pred             cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhh-HHHHH
Confidence             356789999999998 4    35667788999999999954   89999999999999999999987654210 00111


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK  286 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~  286 (319)
                      .+.. ...+++.|++|++ .++.++||+++.+       +++++++.
T Consensus       284 ~~~~-~~D~~~~s~hK~~-~~p~g~G~l~~~~-------~~~~~~l~  321 (456)
T 2z67_A          284 AFKY-RVDAVVSSSDKNL-LTPIGGGLVYSTD-------AEFIKEIS  321 (456)
T ss_dssp             HHTS-CCSEEEEEHHHHH-CCCSSCEEEEESC-------HHHHHHHH
T ss_pred             hhCC-CCCEEEEcCCCCc-CCCCCeEEEEEcC-------HHHHhhcC
Confidence            1111 1226788999974 5568999999854       24666553

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.75  E-value=4.3e-17  Score=160.91  Aligned_cols=171  Identities=11%  Similarity=0.051  Sum_probs=130.4

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK  167 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  167 (319)
                      ...++++.+++++.      .+ +.+++++|+++++..++.+++++||+|+++.|+|.++...+...|++++.++.... 
T Consensus       206 ~v~~~ee~la~l~G------~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-  277 (755)
T 2vyc_A          206 AFGESEKYAARVFG------AD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-  277 (755)
T ss_dssp             HHHHHHHHHHHHHT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-
T ss_pred             HHHHHHHHHHHHhC------CC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-
Confidence            35678888888873      22 45788999999999999999999999999999999988888889999998887532 


Q ss_pred             CCc----C-----CHHHHHhhhcc--Cce--------EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc
Q 020968          168 GWE----V-----DLDAVEALADE--NTV--------ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL  228 (319)
Q Consensus       168 ~~~----~-----d~~~l~~~l~~--~~~--------~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~  228 (319)
                      +++    +     |++.+++++++  +++        ++++++| ||+|.+.+   +++|+++|+++|+++++|++|+..
T Consensus       278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~  353 (755)
T 2vyc_A          278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGY  353 (755)
T ss_dssp             TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTT
T ss_pred             ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchh
Confidence            333    4     99999998864  333        8889998 79999966   889999999999999999999854


Q ss_pred             -cCCCC--CCCCCcc--cC-CCCCeEEEecCccccCCCcce-eeEEEeeCC
Q 020968          229 -AFGNT--PFVPMGV--FG-SIVPVLTLGSISKRWIVPGWR-LGWLVTSDP  272 (319)
Q Consensus       229 -~~~~~--~~~~~~~--~~-~~~~vi~~~s~sK~~~~~G~r-~G~i~~~~~  272 (319)
                       .+++.  +..++..  .+ ..+++|++.|+||+  ++|.+ .|+++++++
T Consensus       354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~  402 (755)
T 2vyc_A          354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREG  402 (755)
T ss_dssp             GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECC
T ss_pred             cccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCc
Confidence             23321  1222211  12 23567899999998  46666 566666553

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.60  E-value=9.3e-20  Score=170.31  Aligned_cols=244  Identities=14%  Similarity=0.041  Sum_probs=159.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+|||..|....... -.+|.+.+++.+++.......|+ .....+|.+.+++++      + ..+.+++++++++|
T Consensus        98 dG~~yiD~~~~~~~~~lG-h~~p~V~~Av~~q~~~~~~~~~~-~~~~~~Lae~L~~~~------p-~~~~v~~~nSGseA  168 (465)
T 2yky_A           98 DGHAYVNFLGEYTAGLFG-HSHPVIRAAVERALAVGLNLSTQ-TENEALFAEAVCDRF------P-SIDLVRFTNSGTEA  168 (465)
Confidence            466788888886431111 24688999998887764333443 345567777777766      2 35789999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHh----hCCC--eEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcC
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARAT----HSHL--EVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIIN  191 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~  191 (319)
                      +..+++...  ..+++|++.+++|.++...+.    ..|.  .+..++.       .|++.++++++   +++++|++..
T Consensus       169 ~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~ep  241 (465)
T 2yky_A          169 NLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVEP  241 (465)
Confidence            999998753  345899999999987544332    1222  1222221       27888888887   5666776654


Q ss_pred             CCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      .++++|.+ .+.+.+++|.++|+++|+++|+||+|. +.. +. ......+   +...-+.+|||.++. |+|+||++++
T Consensus       242 v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~---gv~pDi~t~sK~lg~-G~piG~v~~~  314 (465)
T 2yky_A          242 MLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEML---GISADLTTLGKYIGG-GMSFGAFGGR  314 (465)
Confidence            45669964 467789999999999999999999999 632 21 1111111   112334589999876 9999999986


Q ss_pred             CCCCCccchHHHHHHHH------hhhhcCCcchHHHHHHHHHH--hccccccccc
Q 020968          271 DPNGILQDSGIVDSIKS------FLNISSDPATFIQFLKSSRK--LKRNSFLKSL  317 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l--~~~~~~~~~l  317 (319)
                      .        ++++.+..      ....+.+.++++|.++..++  ++++.+.+++
T Consensus       315 ~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~  361 (465)
T 2yky_A          315 R--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDL  361 (465)
Confidence            5        36666654      12234456788887765543  3344554443

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.74  E-value=5.3e-17  Score=152.56  Aligned_cols=206  Identities=12%  Similarity=0.057  Sum_probs=127.9

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC------CcCCHHHHHHHHHHHhhhCCCCCCCCc---EEEe
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS------TVGILPARRAIADYLNRDLPYKLSPDD---VYLT  116 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~---i~~~  116 (319)
                      +.|.|..++      -.+++.+.+++...+.......|+.      .....++++...+++.+.+|.  +.+.   .+++
T Consensus        55 ~~i~lias~------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~--~~~~~~~~v~~  126 (490)
T 2a7v_A           55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL--DPAQWGVNVQP  126 (490)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTC--CTTTEEEECCC
T ss_pred             cCceEECCC------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCC--CcccCceEEeC
Confidence            566776543      2478999999988765432223332      222357775555555555553  3332   3556


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHhhCCCeEE--EEeccCCCCCcCCHHHHHhhhc-cCce
Q 020968          117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEA--------RATHSHLEVR--HFDLLPAKGWEVDLDAVEALAD-ENTV  185 (319)
Q Consensus       117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~--~~~~~~~~~~~~d~~~l~~~l~-~~~~  185 (319)
                      +++++|+..++.+++++||+|++.++.|.++..        .+...|..+.  .+++++ +++.+|++++++.+. .+++
T Consensus       127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k  205 (490)
T 2a7v_A          127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR  205 (490)
T ss_dssp             SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence            688999999999999999999999998865321        2234555433  344332 356899999999885 4678


Q ss_pred             EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       186 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      +|+++.++||+  ..   ++++|.++|+++|+++++|+++. ++...+..+.++.   .  -.+++.|+||++  .|.|.
T Consensus       206 lIi~~~s~~~~--~~---dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~---~--aDiv~~S~hK~l--~Gp~G  273 (490)
T 2a7v_A          206 LIIAGTSAYAR--LI---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---H--ADIVTTTTHKTL--RGARS  273 (490)
T ss_dssp             EEEECCSSCCS--CC---CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG---T--CSEEEEESSGGG--CSCSC
T ss_pred             EEEEcCCCCCC--cc---cHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC---C--CCEEEECCcccC--ccccc
Confidence            88888888885  33   38999999999999999999975 4444443333331   1  238899999996  56678


Q ss_pred             eEEEeeCC
Q 020968          265 GWLVTSDP  272 (319)
Q Consensus       265 G~i~~~~~  272 (319)
                      |+++++++
T Consensus       274 G~i~~~~~  281 (490)
T 2a7v_A          274 GLIFYRKG  281 (490)
T ss_dssp             EEEEEECS
T ss_pred             hheeeccc
Confidence            99998763

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.74  E-value=1.6e-17  Score=162.71  Aligned_cols=174  Identities=14%  Similarity=0.102  Sum_probs=130.7

Q ss_pred             CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HhhCCCeEEEEe
Q 020968           84 SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRHFD  162 (319)
Q Consensus        84 ~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~  162 (319)
                      .+...+.++++.+|++++      .+ ..+++++|+++++..++.+++++||+|+++.++|.++... ++..|++++.++
T Consensus       170 ~~~~~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~  242 (730)
T 1c4k_A          170 IHEGPAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQ  242 (730)
T ss_dssp             TTBTHHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEEC
T ss_pred             CChHHHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEe
Confidence            344456899999998883      23 3578889999999999999999999999999999988777 888999998887


Q ss_pred             ccCCCCCc----CCHHHH-----HhhhccC------c----eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968          163 LLPAKGWE----VDLDAV-----EALADEN------T----VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE  223 (319)
Q Consensus       163 ~~~~~~~~----~d~~~l-----~~~l~~~------~----~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~  223 (319)
                      .... +|+    +|++++     +++++++      +    +++++++| ||+|.+.+   +++|+++|+++++++++|+
T Consensus       243 ~~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDe  317 (730)
T 1c4k_A          243 TNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDS  317 (730)
T ss_dssp             EEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEEC
T ss_pred             CCcc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEc
Confidence            6432 333    688888     8888654      4    78999998 58999976   8999999999999999999


Q ss_pred             CCCCc-cCCCCC--CCCCc--ccC-CCCCeEEEecCccccCCCcceee-EEEeeC
Q 020968          224 VYDHL-AFGNTP--FVPMG--VFG-SIVPVLTLGSISKRWIVPGWRLG-WLVTSD  271 (319)
Q Consensus       224 a~~~~-~~~~~~--~~~~~--~~~-~~~~vi~~~s~sK~~~~~G~r~G-~i~~~~  271 (319)
                      +|+.. .+++..  ..++.  .+. ++.++++++|+||+  ++|.+.| ++.+++
T Consensus       318 Ah~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I~v~~  370 (730)
T 1c4k_A          318 AWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQIHKKD  370 (730)
T ss_dssp             TTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEEEEEC
T ss_pred             ccccccccCcccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEEEecc
Confidence            99753 343211  11221  112 23467999999998  4666654 554544

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.73  E-value=7.2e-17  Score=152.12  Aligned_cols=231  Identities=10%  Similarity=0.053  Sum_probs=164.2

Q ss_pred             ccHHHHHHHHHHHhhhc----CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHh
Q 020968           26 ITVRGVLNSLLENLNKN----DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLN  101 (319)
Q Consensus        26 ~~i~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~  101 (319)
                      ....++++.+.+.+...    ..+....+-.+.      ..++..+.+.+...+.... ..|...++..++++.+++++.
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~~~~~~~~~~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~  128 (481)
T 4e1o_A           56 DSWDSIFGDIERIIMPGVVHWQSPHMHAYYPAL------TSWPSLLGDMLADAINCLG-FTWASSPACTELEMNVMDWLA  128 (481)
T ss_dssp             CCHHHHHHHHHHHTGGGCCCTTSTTBCSSSCCC------CCHHHHHHHHHHHHHCCCC-SSTTTCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCC------CCHHHHHHHHHHHHhCccc-CCcCCCcHHHHHHHHHHHHHH
Confidence            34556666666655332    122322222111      1334555666666665543 478777888999999999999


Q ss_pred             hhCCCCCCC--------CcEEEeCCHHHHHHHHHHHhcC-------------------CCCEEEEcCCCCcchHHHHhhC
Q 020968          102 RDLPYKLSP--------DDVYLTLGCTQAIEVILTVLAR-------------------PGANILLPRPGFPYYEARATHS  154 (319)
Q Consensus       102 ~~~g~~~~~--------~~i~~~~G~t~ai~~~~~~l~~-------------------~gd~Vl~~~p~~~~~~~~~~~~  154 (319)
                      +.+|.....        ...++|+|+|+++..++.+..+                   +++.|+++.+.|.++.+.++..
T Consensus       129 ~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~  208 (481)
T 4e1o_A          129 KMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLIS  208 (481)
T ss_dssp             HHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHH
T ss_pred             HHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhC
Confidence            877754321        3679999999999888876532                   4678999999999999999999


Q ss_pred             CCeEEEEeccCCCCCcCCHHHHHhhhccC------ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc
Q 020968          155 HLEVRHFDLLPAKGWEVDLDAVEALADEN------TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL  228 (319)
Q Consensus       155 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~  228 (319)
                      |.+++.++.+  .++.+|+++|++++++.      +.+|+++.++|++|.+   +++++|+++|+++|+++++|++|+..
T Consensus       209 g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~  283 (481)
T 4e1o_A          209 LVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGT  283 (481)
T ss_dssp             TCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred             CCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHH
Confidence            9999999874  46789999999998653      5678888999999998   56999999999999999999999875


Q ss_pred             cCCCCCCCC-CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          229 AFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       229 ~~~~~~~~~-~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ..-...... +..+.  ....+..+.+|+++.| ..+|++++.+
T Consensus       284 ~~~~~~~~~~~~gi~--~aDsi~~~~hK~l~~p-~g~g~l~~~~  324 (481)
T 4e1o_A          284 AFLCPEFRGFLKGIE--YADSFTFNPSKWMMVH-FDCTGFWVKD  324 (481)
T ss_dssp             GGGSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESB
T ss_pred             HHhChhhHHHhcCcc--cCCEEEEChHHhcCCC-CceEEEEEeC
Confidence            432111111 11111  1126677999998776 5578877755

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.71  E-value=1.2e-16  Score=155.42  Aligned_cols=172  Identities=16%  Similarity=0.107  Sum_probs=127.3

Q ss_pred             CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEec
Q 020968           84 SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL  163 (319)
Q Consensus        84 ~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  163 (319)
                      .+..-+.++++.+|++++.       ...+++++|++.|+..++.+++++||+|+++.++|.++...+...|++++.++.
T Consensus       192 ~~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~  264 (715)
T 3n75_A          192 DHSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRP  264 (715)
T ss_dssp             TTBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECC
T ss_pred             CCcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEec
Confidence            3444567999999999932       335667788889999999999999999999999999999999999999999887


Q ss_pred             cCCCCCcC---------CHHHHHhhhcc--Cce---EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968          164 LPAKGWEV---------DLDAVEALADE--NTV---ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA  229 (319)
Q Consensus       164 ~~~~~~~~---------d~~~l~~~l~~--~~~---~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~  229 (319)
                      .. +.|++         |++.+++++.+  +++   ++++++| |++|.+++   +++|+++|+++  .+++|+||+...
T Consensus       265 ~~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~  337 (715)
T 3n75_A          265 TR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYT  337 (715)
T ss_dssp             CB-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTG
T ss_pred             cc-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEcccccccc
Confidence            54 34543         89999999864  233   7999999 99999987   66777777655  378999998653


Q ss_pred             -CCCCCCCCCcccCC---CCC-eEEEecCccccCCCcc-eeeEEEeeCC
Q 020968          230 -FGNTPFVPMGVFGS---IVP-VLTLGSISKRWIVPGW-RLGWLVTSDP  272 (319)
Q Consensus       230 -~~~~~~~~~~~~~~---~~~-vi~~~s~sK~~~~~G~-r~G~i~~~~~  272 (319)
                       +++.- ........   .+. +++++|+||++  +|+ ..|++.++++
T Consensus       338 ~f~~~~-~~~~al~~g~~aD~vii~~~S~hKtL--~gltqgs~i~v~~~  383 (715)
T 3n75_A          338 NFSPIY-EGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGD  383 (715)
T ss_dssp             GGSGGG-TTSSTTSSSCCTTCEEEEEECHHHHS--SCCTTCEEEEEESC
T ss_pred             ccCCcc-ccccccccCcCCCEEEEEEecccccc--cCCCCeeEEEeCch
Confidence             33211 11111211   133 36799999994  554 3578887654

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.70  E-value=6.1e-16  Score=141.29  Aligned_cols=167  Identities=14%  Similarity=0.169  Sum_probs=122.9

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH--HHHhhCCC--eEEEEeccCC
Q 020968           91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE--ARATHSHL--EVRHFDLLPA  166 (319)
Q Consensus        91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~--~~~~~~~~~~  166 (319)
                      ++.+.+++.+.+.+|.  + +.+++++|+++|++.++..+ ++||+|++..+.|.++.  ..++..|.  +++.++.+..
T Consensus        35 ~~~~~~~~~l~~~~~~--~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  110 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYNA--E-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT  110 (379)
T ss_dssp             HHHHHHHHHHHHHHTC--S-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred             HHHHHHHHHHHHHhCC--C-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence            4444455554444443  2 68899999999999988655 69999999999997643  45555564  6777765431


Q ss_pred             ------CC-CcCCHHHHHhhhc-cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCC
Q 020968          167 ------KG-WEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM  238 (319)
Q Consensus       167 ------~~-~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~  238 (319)
                            .. ..+|++++++++. +++++|++++++||+|.+++.+++++|.++|+++|+++|+|+++. .   + .+..+
T Consensus       111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~  185 (379)
T 3ke3_A          111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDM  185 (379)
T ss_dssp             SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCH
T ss_pred             ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccccc
Confidence                  11 1479999999985 478999999999999999999999999999999999999999975 1   2 22222


Q ss_pred             cccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          239 GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       239 ~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ..+.   ..+++.|++|+++.+ .++|+++++
T Consensus       186 ~~~~---~d~~~~s~~K~l~~~-~g~g~~~~~  213 (379)
T 3ke3_A          186 KELG---IDVLISAPQKGWSST-PCAGLVMLS  213 (379)
T ss_dssp             HHHT---CSEEEECTTTTTCSC-CCEEEEEEC
T ss_pred             cccC---CCEEEecchhhcCCC-CceEEEEEC
Confidence            2222   248899999997543 358999875

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.70  E-value=2.5e-16  Score=148.19  Aligned_cols=230  Identities=10%  Similarity=0.027  Sum_probs=161.7

Q ss_pred             cHHHHHHHHHHHhhhc----CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhh
Q 020968           27 TVRGVLNSLLENLNKN----DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR  102 (319)
Q Consensus        27 ~i~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~  102 (319)
                      ...++++.+.+.+...    ..+....+-.+.      ..++..+.+.+...+.... ..|...++..++++.+++++.+
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~  124 (475)
T 3k40_A           52 KWQDVMQDIERVIMPGVTHWHSPKFHAYFPTA------NSYPAIVADMLSGAIACIG-FTWIASPACTELEVVMMDWLGK  124 (475)
T ss_dssp             CHHHHHHHHHHHTGGGCCCTTCTTBCCSSCCC------CCHHHHHHHHHHHHHCCCS-SSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhccCCCCCCcCceeeCCCC------CcHHHHHHHHHHHHhCccc-cCccCCcHHHHHHHHHHHHHHH
Confidence            4556666666655332    123332222111      1233455556666655433 3677777889999999999999


Q ss_pred             hCCCCCCC-------CcEEEeCCHHHHHHHHHHHhcC-------------------CCCEEEEcCCCCcchHHHHhhCCC
Q 020968          103 DLPYKLSP-------DDVYLTLGCTQAIEVILTVLAR-------------------PGANILLPRPGFPYYEARATHSHL  156 (319)
Q Consensus       103 ~~g~~~~~-------~~i~~~~G~t~ai~~~~~~l~~-------------------~gd~Vl~~~p~~~~~~~~~~~~g~  156 (319)
                      .+|.+...       ...++|+|+|+++..++.+...                   +++.|+++...|.++.+.++..|+
T Consensus       125 ~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~  204 (475)
T 3k40_A          125 MLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV  204 (475)
T ss_dssp             HTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC
T ss_pred             HhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC
Confidence            88765321       3689999999998888776531                   246899999999999999999999


Q ss_pred             eEEEEeccCCCCCcCCHHHHHhhhccC------ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC
Q 020968          157 EVRHFDLLPAKGWEVDLDAVEALADEN------TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF  230 (319)
Q Consensus       157 ~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~  230 (319)
                      +++.++.+  .++ +|+++|++++++.      +.+|+++.++|++|.+   +++++|+++|+++|+++++|++|+....
T Consensus       205 ~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~  278 (475)
T 3k40_A          205 KLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAF  278 (475)
T ss_dssp             EEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGG
T ss_pred             ceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHH
Confidence            99999985  346 9999999998653      5678888999999999   5699999999999999999999987533


Q ss_pred             CCCCCCC-CcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          231 GNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       231 ~~~~~~~-~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ....... +..+.  ....+..+++|+++.| ..+|++++.++
T Consensus       279 ~~~~~~~~~~gi~--~~Ds~~~~~hK~l~~p-~g~g~l~~~~~  318 (475)
T 3k40_A          279 ICPEYRHLMKGIE--SADSFNFNPHKWMLVN-FDCSAMWLKDP  318 (475)
T ss_dssp             GSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESSG
T ss_pred             hCHhhHHHhcCcc--cCCEEEECchhccCCC-CceEEEEEeCH
Confidence            1111111 11111  1137778999996555 56888888664

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.67  E-value=4.1e-16  Score=146.62  Aligned_cols=244  Identities=12%  Similarity=0.049  Sum_probs=153.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC---CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA---RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      +..+|||..|....... ..+|.+.+++.+++...   ....|+. ....++++.+++.+.+..+  .+.+++++++|++
T Consensus        62 G~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sGs  137 (472)
T 1ohv_A           62 GNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACGS  137 (472)
T ss_dssp             SCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHH
T ss_pred             CCEEEECCCCHhhcccC-CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence            55688888876432111 25889999998875322   1113433 3457899999997766443  2567999999999


Q ss_pred             HHHHHHHHHhc--------C-----------------CC---CEEEEcCCCCcchHHHH-hhCCCeE-----------EE
Q 020968          121 QAIEVILTVLA--------R-----------------PG---ANILLPRPGFPYYEARA-THSHLEV-----------RH  160 (319)
Q Consensus       121 ~ai~~~~~~l~--------~-----------------~g---d~Vl~~~p~~~~~~~~~-~~~g~~~-----------~~  160 (319)
                      +|+..+++.+.        .                 +|   ++|++.++.|+++...+ ...|...           ..
T Consensus       138 eA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~  217 (472)
T 1ohv_A          138 CSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPI  217 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCE
T ss_pred             hHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcc
Confidence            99999998763        1                 35   89999999998865444 2323210           11


Q ss_pred             EeccCC-----CC--C-----cCCHHHHHhhhcc------CceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEE
Q 020968          161 FDLLPA-----KG--W-----EVDLDAVEALADE------NTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIA  221 (319)
Q Consensus       161 ~~~~~~-----~~--~-----~~d~~~l~~~l~~------~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~  221 (319)
                      ++....     ..  +     ..|++.|++++++      ++++|++...+|++|. ..+.+.+++|.++|+++|+++|+
T Consensus       218 ~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~  297 (472)
T 1ohv_A          218 APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV  297 (472)
T ss_dssp             ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             cCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence            121100     00  0     1267888888865      6777777666888996 56889999999999999999999


Q ss_pred             eCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHH
Q 020968          222 DEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQ  300 (319)
Q Consensus       222 D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q  300 (319)
                      ||+|.++.+.+. ...+..+.-. ..+-+.||||.+ +.|   ||++ +.        ++. .+.... ..+.+.++++|
T Consensus       298 DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~~~  361 (472)
T 1ohv_A          298 DEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPSKN  361 (472)
T ss_dssp             ECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHHHH
T ss_pred             eCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHHHH
Confidence            999987665442 1122222211 002234899996 455   7766 32        121 111111 12335677888


Q ss_pred             HHHHHHH
Q 020968          301 FLKSSRK  307 (319)
Q Consensus       301 ~~~~~~l  307 (319)
                      .++..++
T Consensus       362 aaa~aal  368 (472)
T 1ohv_A          362 LLLAEVI  368 (472)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7766544

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.65  E-value=3.2e-15  Score=139.11  Aligned_cols=191  Identities=23%  Similarity=0.284  Sum_probs=124.4

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHH--HHHhhcCCCCCCCC--CcCC----HHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAI--VHSVRSARFNCYSS--TVGI----LPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~--~~~~~~~~~~~Y~~--~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      +..++.|.++    ...|+.+.+.+  ......  ...|.+  ..|.    .++++.+++++    |  ++++++++++|
T Consensus        66 ~~~~~~g~~~----~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~----g--~~~~~i~~~~g  133 (438)
T 1wyu_A           66 KAFLGGGVRS----HHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELA----G--LEIANASMYDG  133 (438)
T ss_dssp             TCCCCSSCCC----CCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHH----T--SSEECSCBSSH
T ss_pred             ccccCCCccC----CcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHh----C--CCccceEEeCc
Confidence            4567777755    45566664444  222221  122321  2333    45555555555    3  45668899999


Q ss_pred             HHHHHHHHHHH-hcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968          119 CTQAIEVILTV-LARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG  193 (319)
Q Consensus       119 ~t~ai~~~~~~-l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  193 (319)
                      ++.+++.+..+ ..++||+|+++.+.|+.+...+    +..|++++.++.   +++.+|+++    +++++++|++++| 
T Consensus       134 ~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~---~~~~~d~~~----i~~~t~~v~i~~p-  205 (438)
T 1wyu_A          134 ATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL---EGGRTPLPE----VGEEVGAVVVQNP-  205 (438)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC---BTTBCCCCC----CCTTEEEEEEESS-
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC---cCCccCHHH----hCCCeEEEEEECC-
Confidence            99444433333 2468999999999999887554    458999998886   234677665    5668899999999 


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCC---CCCccCCCCCCCCCcccCCCCCeEEEecCccccC----CCcceeeE
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEV---YDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI----VPGWRLGW  266 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a---~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~----~~G~r~G~  266 (319)
                      ||||.+.+   +++|+++|+++|+++++|..   ++.+     .  ....+..   .+++.| +|.|+    +.|.|+||
T Consensus       206 n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~-----~--~~~~~g~---D~~~~s-~kk~~~~~~~~Gp~~G~  271 (438)
T 1wyu_A          206 NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVL-----K--PPGAYGA---DIAVGD-GQSLGLPMGFGGPHFGF  271 (438)
T ss_dssp             CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTB-----C--CHHHHTC---SEEEEE-CTTTTCCCGGGCSCCEE
T ss_pred             CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCc-----C--CCccCCC---CEEEEC-CcccCCCccCCCCCeeE
Confidence            99999975   99999999999999996633   2221     1  1122222   266666 66554    45679999


Q ss_pred             EEeeC
Q 020968          267 LVTSD  271 (319)
Q Consensus       267 i~~~~  271 (319)
                      +++++
T Consensus       272 l~~~~  276 (438)
T 1wyu_A          272 LATKK  276 (438)
T ss_dssp             EEECG
T ss_pred             EEEcH
Confidence            99864

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.46  E-value=1.2e-13  Score=126.15  Aligned_cols=184  Identities=11%  Similarity=0.017  Sum_probs=128.4

Q ss_pred             CCcHHHHHHHHHHhhcCC--------CCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-eCCHHHHHHHHHHH
Q 020968           62 RTASVAVDAIVHSVRSAR--------FNCYSS--TVGILPARRAIADYLNRDLPYKLSP-DDVYL-TLGCTQAIEVILTV  129 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~--------~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~-~~G~t~ai~~~~~~  129 (319)
                      +.++.+.+++.+.+....        ....++  ...+++.|+.+++++      +.+. ++|++ |+|+|+++++++..
T Consensus        37 ~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~ai~~  110 (386)
T 3qm2_A           37 MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVLFCHGGGRGQFAGVPLN  110 (386)
T ss_dssp             CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEEEEESCTTHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHHh
Confidence            788999999976653211        001111  346789999999999      3333 47888 69999999999999


Q ss_pred             hcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEecc-CCCCCcCCHHHHHhhhccCceEEEEcCCCCccccc-cCHHHH
Q 020968          130 LARPGANILLPRPGFPY--YEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALADENTVALVIINPGNPCGNV-YTYQHL  205 (319)
Q Consensus       130 l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l  205 (319)
                      +.++||+|++....+.+  +...++..| ++..++.+ ...+..+++++++.++++++++|.+++..|.||.+ .+   +
T Consensus       111 l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p---i  186 (386)
T 3qm2_A          111 LLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE---T  186 (386)
T ss_dssp             HCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC---C
T ss_pred             ccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc---h
Confidence            99999998755443333  345567778 88888875 12333367788888888889999999888899996 44   4


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ++|.     +|+++++|.+++.    +..+..+..++     +.+.|..|++|.+|  +|++++.+
T Consensus       187 ~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~  236 (386)
T 3qm2_A          187 PDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVRE  236 (386)
T ss_dssp             CCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEG
T ss_pred             hhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECH
Confidence            4443     6999999999886    33444554442     46689999997667  77777654

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.44  E-value=2.2e-13  Score=123.84  Aligned_cols=184  Identities=12%  Similarity=0.018  Sum_probs=130.4

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCC--------CCC--CcCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-eCCHHHHHHHHHH
Q 020968           61 FRTASVAVDAIVHSVRSARFNC--------YSS--TVGILPARRAIADYLNRDLPYKLSP-DDVYL-TLGCTQAIEVILT  128 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~--------Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~-~~G~t~ai~~~~~  128 (319)
                      .+.|+.+.+++.+.+.....+.        .++  ..-+++.|+.+++++      +.+. ++|++ |+|+|+++++++.
T Consensus        22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a~~   95 (377)
T 3e77_A           22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAVPL   95 (377)
T ss_dssp             CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHHHH
Confidence            5889999999998875421111        110  112456777777777      3333 57888 5889999999999


Q ss_pred             HhcCC--CCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968          129 VLARP--GANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       129 ~l~~~--gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      .+..+  ||+|++....+..  +...++..|..++.++.+  .++..+++.++..+++++++|.+++..|.||.+.+.  
T Consensus        96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi--  171 (377)
T 3e77_A           96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF--  171 (377)
T ss_dssp             HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--
T ss_pred             hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh--
Confidence            98865  8998877665543  345566778776666653  334567777777788889999999888999999874  


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                            +|+++|+++++|.+++.    +..+..+..++     +++.|..|++|.+|  +|++++.+
T Consensus       172 ------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~  221 (377)
T 3e77_A          172 ------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRD  221 (377)
T ss_dssp             ------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEET
T ss_pred             ------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcH
Confidence                  36788999999999987    33344444332     47789999998777  67776654

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.43  E-value=1e-12  Score=118.83  Aligned_cols=190  Identities=14%  Similarity=0.073  Sum_probs=130.9

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC-----CC-----CcCCHHHHHHHHHHHhhhCCCCCC-CCcE
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY-----SS-----TVGILPARRAIADYLNRDLPYKLS-PDDV  113 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y-----~~-----~~g~~~lr~~ia~~~~~~~g~~~~-~~~i  113 (319)
                      ..+++|+.|-      .+.++.+.+++.+.+.....+..     +.     ...+++.|+.+++++      +.+ +++|
T Consensus         4 ~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~v   71 (361)
T 3m5u_A            4 MRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYEV   71 (361)
T ss_dssp             CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEEE
T ss_pred             cceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceE
Confidence            4678888886      47889999999987653211110     11     123456777777777      333 4578


Q ss_pred             EE-eCCHHHHHHHHHHHhcCCCCEEE-EcCCCCc-chHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEc
Q 020968          114 YL-TLGCTQAIEVILTVLARPGANIL-LPRPGFP-YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII  190 (319)
Q Consensus       114 ~~-~~G~t~ai~~~~~~l~~~gd~Vl-~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~  190 (319)
                      ++ |+|+|+++++++..+. +||++. +....|. .+...++..|.++..++.+..+.+.++++.  + +++++++|.++
T Consensus        72 ~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~  147 (361)
T 3m5u_A           72 LFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYIC  147 (361)
T ss_dssp             EEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEE
T ss_pred             EEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEe
Confidence            87 9999999999999998 788653 2222332 234566778999999998654333345555  3 78889999999


Q ss_pred             CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      +..|.||.+.+.        +++ +|+++++|.+++.    +..+..+..+     .+++.|..|++|.+|  +|++++.
T Consensus       148 ~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~~  207 (361)
T 3m5u_A          148 SNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFSNI-----ALFYGGVQKNAGISG--LSCIFIR  207 (361)
T ss_dssp             SEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCTTE-----EEEEEETTTTSSCTT--CEEEEEE
T ss_pred             CCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcccC-----CEEEEechhccCCCc--cEEEEEc
Confidence            888899998662        233 4999999999886    3333343322     278889999997667  6777764

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.36  E-value=1.7e-12  Score=118.54  Aligned_cols=164  Identities=14%  Similarity=0.081  Sum_probs=114.9

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-
Q 020968           91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP----GANILLPRPGFPYYEARATHSHLEVRHFDLLP-  165 (319)
Q Consensus        91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-  165 (319)
                      .|.+.++--+-+..|.+ .....++++|+|.++.+++.+.+++    |++|+++..+|.+..+.+...|+++++++... 
T Consensus       116 ~ltn~l~ld~L~~~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d  194 (501)
T 3hl2_A          116 KITNSLVLDIIKLAGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLE  194 (501)
T ss_dssp             HHHHHHHHHHHHHTTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEE
T ss_pred             HHHHHHHHHHHHHcCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeec
Confidence            44444433333335655 3446899999998888777777653    49999999999999999999999999887632 


Q ss_pred             CCCCcCCHHHHHhhhcc---CceEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc-CCCCCCCCCcc
Q 020968          166 AKGWEVDLDAVEALADE---NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGV  240 (319)
Q Consensus       166 ~~~~~~d~~~l~~~l~~---~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~-~~~~~~~~~~~  240 (319)
                      .+.+.+|++.+++++++   +..+++++++ .|..+.+   .++++|+++|+++|+++++|+||+... +....+.....
T Consensus       195 ~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~  271 (501)
T 3hl2_A          195 GDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGAR  271 (501)
T ss_dssp             TTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHh
Confidence            23578999999999864   2334444444 5544555   469999999999999999999999743 11110111111


Q ss_pred             cCCCCCeEEEecCccccCCC
Q 020968          241 FGSIVPVLTLGSISKRWIVP  260 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~  260 (319)
                      +.  .-.+++.|.+|.+.+|
T Consensus       272 ~G--rAD~vVqS~HK~llvp  289 (501)
T 3hl2_A          272 VG--RIDAFVQSLDKNFMVP  289 (501)
T ss_dssp             HS--CCCEEEEEHHHHHCCC
T ss_pred             cC--CCcEEEecccccceee
Confidence            22  1238999999998776

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.32  E-value=3.8e-12  Score=117.34  Aligned_cols=177  Identities=12%  Similarity=0.026  Sum_probs=121.4

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968           89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP----GANILLPRPGFPYYEARATHSHLEVRHFDLL  164 (319)
Q Consensus        89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~  164 (319)
                      ...+.+.+..++.+..|.+ +....++++|+|.++.+++.+.+++    ++.|+++..+|.+..+.+...|++.+.++..
T Consensus        96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~  174 (450)
T 3bc8_A           96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV  174 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred             HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence            4456666777666655643 3345688999885555555554443    8999999999999999999999999888764


Q ss_pred             C-CCCCcCCHHHHHhhhcc---CceEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc
Q 020968          165 P-AKGWEVDLDAVEALADE---NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       165 ~-~~~~~~d~~~l~~~l~~---~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                      + ++.+.+|++.+++++++   +.+++++.+| .+.+|.+   .++++|+++|+++|+++++|+||+.....- ...+-.
T Consensus       175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~-~~l~~~  250 (450)
T 3bc8_A          175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKC-MHLIQQ  250 (450)
T ss_dssp             EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHH
T ss_pred             ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhh-HhHHHH
Confidence            2 33578999999999964   2456666666 4566777   569999999999999999999999643210 000001


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+....-..++.|.+|++..+ ...+++...+
T Consensus       251 a~~~~~AD~~v~S~HK~l~a~-~~~~~l~~rd  281 (450)
T 3bc8_A          251 GARVGRIDAFVQSLDKNFMVP-VGGAIIAGFN  281 (450)
T ss_dssp             HHHHSCCCEEEEEHHHHHSCC-SSCEEEEESC
T ss_pred             HhcccCCCEEEECCccCCCch-hccEEEEecC
Confidence            110011237889999996443 4456666543

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.20  E-value=1.4e-10  Score=107.58  Aligned_cols=242  Identities=12%  Similarity=0.047  Sum_probs=143.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..+|||..|.-..... --.|.+.+|+.+++...... ..+.....++.+.+++.+    +   ..+.+++++++++|+
T Consensus        86 G~~ylD~~~g~~~~~lG-H~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsEA~  156 (454)
T 4ao9_A           86 GHRYADFIAEYTAGVYG-HSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERF----P---QIEQLRFTNSGTEAN  156 (454)
T ss_dssp             CCEEEESSGGGGTTTTC-SCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHHHH
T ss_pred             CCEEEEccccHHhhccc-CCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHHHH
Confidence            55677876663211111 24689999999988765321 223334456666666655    1   467899999999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCCcchHHHHh------hCCCeEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEEcCC
Q 020968          124 EVILTVLAR--PGANILLPRPGFPYYEARAT------HSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINP  192 (319)
Q Consensus       124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p  192 (319)
                      ..+++....  ..++|+....+|.+....+.      ........++.       -|.+.+++.++.   ++.+|++...
T Consensus       157 e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvEPv  229 (454)
T 4ao9_A          157 LMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVEPM  229 (454)
T ss_dssp             HHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEECSE
T ss_pred             HHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEeccc
Confidence            999886542  34788888888876321111      01112222221       278888887753   4455555544


Q ss_pred             CCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      ....|.+ .+++-+++|.++|+++|+++|+||++.+  ..+... ....+.-.+.++   +++|.+ ..|+.+|.+++..
T Consensus       230 ~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~-a~e~~gv~PDi~---t~gK~l-ggG~Piga~~~~~  302 (454)
T 4ao9_A          230 QGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG-LANKLGIRSDLT---TLGKYI-GGGMSFGAFGGRA  302 (454)
T ss_dssp             ESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC-HHHHHTCCCSEE---EEEGGG-GTTSSCEEEEECH
T ss_pred             cCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc-chhccCCCCcEE---Eecccc-CCCCcceeeeeHH
Confidence            5556754 4667799999999999999999999864  212111 111122112233   678995 5689999998853


Q ss_pred             CCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968          272 PNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK--LKRNSFLKS  316 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l--~~~~~~~~~  316 (319)
                              ++++.+...     ...+.+.++++..+....+  ++++++.++
T Consensus       303 --------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~  346 (454)
T 4ao9_A          303 --------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGA  346 (454)
T ss_dssp             --------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             --------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHH
Confidence                    455544321     1112344566655544433  445554443

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.09  E-value=5.1e-09  Score=104.28  Aligned_cols=238  Identities=12%  Similarity=0.052  Sum_probs=137.6

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-----CCC----
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-----RPG----  134 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-----~~g----  134 (319)
                      .|.+.+|+++++.......+..  ...+....+++.+.+..+.. ..+.+++++++++|+..+++...     ..|    
T Consensus       399 ~p~i~~Ai~~Q~~~l~h~~~~~--~~~~~~~~Lae~L~~~~p~~-~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~  475 (831)
T 4a0g_A          399 QAELAREMGYTAARFGHVMFPE--NVYEPALKCAELLLDGVGKG-WASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEA  475 (831)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCTT--EECHHHHHHHHHHHHTTTTT-TCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred             CHHHHHHHHHHHhhcccccccc--cCCHHHHHHHHHHHHhCCCC-CCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCcc
Confidence            6899999998876632211111  11233345566655532211 14689999999999999887652     122    


Q ss_pred             --------CEEEEcCCCCcch-HHHHhhCCC---------------eE-------------EEEeccCC------CC-Cc
Q 020968          135 --------ANILLPRPGFPYY-EARATHSHL---------------EV-------------RHFDLLPA------KG-WE  170 (319)
Q Consensus       135 --------d~Vl~~~p~~~~~-~~~~~~~g~---------------~~-------------~~~~~~~~------~~-~~  170 (319)
                              .+|+.....|++- ...+...|.               ..             ..++....      +. ..
T Consensus       476 ~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~  555 (831)
T 4a0g_A          476 TEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTF  555 (831)
T ss_dssp             ------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEE
T ss_pred             ccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccc
Confidence                    3688888888653 333333221               00             01111100      00 00


Q ss_pred             CC------------------HHHHHhhhc--------cCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          171 VD------------------LDAVEALAD--------ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       171 ~d------------------~~~l~~~l~--------~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      -+                  .+.+++.+.        +++.+|++... .+..|. +++.+.+++|.++|++||+++|+|
T Consensus       556 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~D  635 (831)
T 4a0g_A          556 TSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFD  635 (831)
T ss_dssp             SCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEE
Confidence            01                  245666664        23455555553 677776 457888999999999999999999


Q ss_pred             CCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh-------hhhcCC
Q 020968          223 EVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSD  294 (319)
Q Consensus       223 ~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  294 (319)
                      |++.+|...|..+ ....+.-.+.++   +++|.++. | +++|++++++        ++.+.+...       ...+..
T Consensus       636 EV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------~i~~~~~~~~~~~~~~hg~T~~  702 (831)
T 4a0g_A          636 EVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------AVFDSFSGDSKLKALLHGHSYS  702 (831)
T ss_dssp             CTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------HHHHTTCSSCGGGSCCCCCTTT
T ss_pred             cCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------HHHHHHhcccccccceeecCCc
Confidence            9999987666443 222222222233   69999755 6 8999999854        455555431       122345


Q ss_pred             cchHHHHHHHHHH--hccccccccc
Q 020968          295 PATFIQFLKSSRK--LKRNSFLKSL  317 (319)
Q Consensus       295 ~~~~~q~~~~~~l--~~~~~~~~~l  317 (319)
                      .+++++.++...+  ++++++.+++
T Consensus       703 g~Pla~Aaala~L~~i~~~~l~~~~  727 (831)
T 4a0g_A          703 AHAMGCATAAKAIQWFKDPETNHNI  727 (831)
T ss_dssp             TCHHHHHHHHHHHHHHHCTTTCTTB
T ss_pred             ccHHHHHHHHHHHHHHHhhHHHHHH
Confidence            5677776655544  3445555443

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.04  E-value=9.9e-09  Score=95.89  Aligned_cols=255  Identities=13%  Similarity=0.094  Sum_probs=144.2

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcC-CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG-ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..+||+..|--..... --.|.+.+++.+++....  .|....+ ..+....+|+.+.+..+  .+.+.+++++++++|
T Consensus        66 G~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGsEA  140 (473)
T 4e3q_A           66 GRRYLDANSGLWNMVAG-FDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGSEA  140 (473)
T ss_dssp             CCEEEETTTTTTTCTTC-SCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSHHHH
T ss_pred             CCEEEEcccCHHHhhcc-CCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCchHHH
Confidence            66788988774322111 246889999998887632  2222111 12334445565554332  245689999999999


Q ss_pred             HHHHHHHhc-------CC-CCEEEEcCCCCcchHH-HHhhCCC-----------eEEEEeccCC---CCCcCC-------
Q 020968          123 IEVILTVLA-------RP-GANILLPRPGFPYYEA-RATHSHL-----------EVRHFDLLPA---KGWEVD-------  172 (319)
Q Consensus       123 i~~~~~~l~-------~~-gd~Vl~~~p~~~~~~~-~~~~~g~-----------~~~~~~~~~~---~~~~~d-------  172 (319)
                      +..+++...       ++ ..+|+....+|++... .+...|.           ....++....   ......       
T Consensus       141 ~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  220 (473)
T 4e3q_A          141 NDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVAR  220 (473)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHH
Confidence            999988642       12 2578888888876322 2222221           1222222100   000011       


Q ss_pred             -HHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968          173 -LDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP  246 (319)
Q Consensus       173 -~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~  246 (319)
                       .+++++.+.    +...+|++.-.....|++ .++.-++++.++|+++|+++|.||++.+|...|..+ ....++-.+.
T Consensus       221 ~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PD  299 (473)
T 4e3q_A          221 LARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDFTPD  299 (473)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTCCCS
T ss_pred             HHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCCCCC
Confidence             233444432    233445444445556754 556679999999999999999999999986655432 1122222222


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh--------hhcCCcchHHHHHHHHHH--hccccccc
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL--------NISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      ++   +++|.++..++.+|.+++.+        ++.+.+....        ..+.+.++++..+....+  ++++++.+
T Consensus       300 i~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~  367 (473)
T 4e3q_A          300 AI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAE  367 (473)
T ss_dssp             EE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHH
T ss_pred             hH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHH
Confidence            34   57899755559999999854        5666665321        123344566655544433  44444443

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.03  E-value=1.1e-08  Score=93.26  Aligned_cols=206  Identities=13%  Similarity=0.050  Sum_probs=127.7

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC------CCcCCHHHHHHHHHHHhhhCCCCCCCC--cEEEeC
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPARRAIADYLNRDLPYKLSPD--DVYLTL  117 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~~--~i~~~~  117 (319)
                      .-|+|-..+      -...+.+.+++-..+.....-+|+      .-...++++....++..+.+|.....=  +|= ..
T Consensus        55 ~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQ-P~  127 (490)
T 3ou5_A           55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQ-PY  127 (490)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECC-CS
T ss_pred             cCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCC-cC
Confidence            446665554      256788888887666543332333      223356677776777777676432110  222 24


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHhhCCC--eEEEEeccCCCCCcCCHHHHHhhhc-cCceE
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEA--------RATHSHL--EVRHFDLLPAKGWEVDLDAVEALAD-ENTVA  186 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~  186 (319)
                      +++.|+..++.++++|||+|+..+..+.++..        .....|.  +.+.+++++ +...+|.+++++... .+|++
T Consensus       128 SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~-~t~~IDyd~~~~~A~~~kPkl  206 (490)
T 3ou5_A          128 SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPRL  206 (490)
T ss_dssp             SHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEET-TTTEECHHHHHHHHHHHCCSE
T ss_pred             CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCC-CCCcccHHHHHHHHhhcCCCe
Confidence            66789999999999999999988876654321        1122222  344445544 345799999998765 47888


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      |+.....+|-=.-     ++++.++|++.|.++++|.+|.. ++-+|.-+.|+. +.+    |+..|.+|+  ++|-|-|
T Consensus       207 Ii~G~SaY~r~id-----~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~-~AD----vVTtTTHKT--LrGPrGG  274 (490)
T 3ou5_A          207 IIAGTSAYARLID-----YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HAD----IVTTTTHKT--LRGARSG  274 (490)
T ss_dssp             EEECCSSCCSCCC-----HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCS----EEEEESSST--TCSCSCE
T ss_pred             EEECCccCccccC-----HHHHHHHHhhcccEEEechhhhhhhhcccccCCccc-cce----EEecccccc--ccCCCce
Confidence            8877666664333     88888999999999999999984 555554444442 222    889999999  6888999


Q ss_pred             EEEeeC
Q 020968          266 WLVTSD  271 (319)
Q Consensus       266 ~i~~~~  271 (319)
                      .|++.+
T Consensus       275 ~Il~~~  280 (490)
T 3ou5_A          275 LIFYRK  280 (490)
T ss_dssp             EEEEEC
T ss_pred             EEEecc
Confidence            999865

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.01  E-value=2.2e-08  Score=93.10  Aligned_cols=254  Identities=16%  Similarity=0.127  Sum_probs=139.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +..++|+..|.-...- =--.|.+.+|+.+++.......+...  ..+....+++.+.+... .-..+.+++++++++|+
T Consensus        63 G~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~lae~L~~~~p-~~~~~~v~f~~sGsEA~  138 (456)
T 4atq_A           63 GNSFIDLGSGIAVTSV-GASDPAVVAAVQEAAAHFTHTCFMVT--PYEGYVAVTEQLNRLTP-GDHAKRTVLFNSGAEAV  138 (456)
T ss_dssp             SCEEEESSHHHHTCTT-CTTCHHHHHHHHHHHHHCSCCTTTTS--CCHHHHHHHHHHHHHSS-CSSCEEEEEESSHHHHH
T ss_pred             CCEEEEccccHHHHhc-CCCCHHHHHHHHHHHhhccCcccCcc--CcHHHHHHHHHHHHhCC-CCCCcEEEEeCChHHHH
Confidence            4556777665211101 12468899999988776432111111  11222334444443221 11245789999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCC-------------CeEEEEeccCC----CCCcCCHHHHHhh----
Q 020968          124 EVILTVLA--RPGANILLPRPGFPYYEARAT-HSH-------------LEVRHFDLLPA----KGWEVDLDAVEAL----  179 (319)
Q Consensus       124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~----~~~~~d~~~l~~~----  179 (319)
                      ..+++...  ....+|+....+|++....+. ..+             ..+..++....    ....-+.+.+++.    
T Consensus       139 e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  218 (456)
T 4atq_A          139 ENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMI  218 (456)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHH
Confidence            99987643  234788888888877433221 111             12333443210    0001122222222    


Q ss_pred             ---hcc-CceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968          180 ---ADE-NTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS  254 (319)
Q Consensus       180 ---l~~-~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s  254 (319)
                         +.. +..++++.-.....|. ..++.-++++.++|++||+++|.||++.++...|.-+ ....++-.+.++   +++
T Consensus       219 e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~g  294 (456)
T 4atq_A          219 EKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDII---TMA  294 (456)
T ss_dssp             HHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEE---EEC
T ss_pred             HHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchh---hhh
Confidence               222 3445555544555565 4566779999999999999999999999976666432 222233222333   568


Q ss_pred             cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hcccccc
Q 020968          255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFL  314 (319)
Q Consensus       255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~  314 (319)
                      |.. ..|+.+|.+++..        ++.+.+.... ..+.+.++++..+....+  ++++++.
T Consensus       295 K~l-ggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~  348 (456)
T 4atq_A          295 KGI-AGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLN  348 (456)
T ss_dssp             GGG-GTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHH
T ss_pred             hcc-cCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHH
Confidence            994 6889999999853        3444443322 223445666665555433  3444443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=85.65  E-value=4.7  Score=34.16  Aligned_cols=97  Identities=10%  Similarity=0.059  Sum_probs=59.0

Q ss_pred             CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------
Q 020968          109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------  182 (319)
Q Consensus       109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------  182 (319)
                      +.+-+++|.|++..=..+++.|.+.|.+|++..-.-......++..|.+...+..|-.     |.++++++++.      
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA-----NLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC-----CHHHHHHHHHHHHHHcC
Confidence            4445555555444334456678889999988765555556667777877777776532     66666665542      


Q ss_pred             CceEEEEcCC-CCccc--cccCHHHHHHHHHH
Q 020968          183 NTVALVIINP-GNPCG--NVYTYQHLQKIAET  211 (319)
Q Consensus       183 ~~~~v~l~~p-~nptG--~~~~~~~l~~i~~~  211 (319)
                      +.. ++++|. .++.+  .-++.++++++.++
T Consensus       103 ~iD-iLVNNAG~~~~~~~~~~~~e~w~~~~~v  133 (273)
T 4fgs_A          103 RID-VLFVNAGGGSMLPLGEVTEEQYDDTFDR  133 (273)
T ss_dssp             CEE-EEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred             CCC-EEEECCCCCCCCChhhccHHHHHHHHHH
Confidence            333 344444 23333  23577888888775

>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}

Probab=81.83  E-value=14  Score=27.76  Aligned_cols=110  Identities=15%  Similarity=0.196  Sum_probs=66.7

Q ss_pred             CCCCCCCcEEEeCCH--HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc
Q 020968          105 PYKLSPDDVYLTLGC--TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE  182 (319)
Q Consensus       105 g~~~~~~~i~~~~G~--t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~  182 (319)
                      |..+....++++.+.  ...+..+++.+.+-|-+|+.+..+    ...++..|+.+..+.-..+++-.-+...+.+.+.+
T Consensus        19 g~~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~   94 (143)
T 2yvq_A           19 GFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD   94 (143)
T ss_dssp             SCCCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT
T ss_pred             CCCCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC
Confidence            334444447777665  566666777787788888877633    45567789988887643332100010235555555


Q ss_pred             CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968          183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA  221 (319)
Q Consensus       183 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  221 (319)
                      +..-++++.|.. .  .-+..+-..|.+.|-+++++++.
T Consensus        95 g~i~lVInt~~~-~--~~~~~d~~~iRR~Av~~~IP~~T  130 (143)
T 2yvq_A           95 GSIDLVINLPNN-N--TKFVHDNYVIRRTAVDSGIPLLT  130 (143)
T ss_dssp             TSCCEEEECCCC-C--GGGHHHHHHHHHHHHHTTCCEEC
T ss_pred             CCceEEEECCCC-C--CcCCccHHHHHHHHHHhCCCeEc
Confidence            444444555532 1  12257889999999999998874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=81.03  E-value=10  Score=31.16  Aligned_cols=97  Identities=21%  Similarity=0.118  Sum_probs=53.9

Q ss_pred             CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------
Q 020968          109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------  182 (319)
Q Consensus       109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------  182 (319)
                      ....+++|.|+...=..+++.|.+.|.+|++..-.-..........+.++..+..|-.     |.+.+++.++.      
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADIS-----DPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTT-----CHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHHCC
Confidence            3445666655443334455667788988888765554455555555667766665432     66666665542      


Q ss_pred             CceEEEEcCCCCccc--cccCHHHHHHHHH
Q 020968          183 NTVALVIINPGNPCG--NVYTYQHLQKIAE  210 (319)
Q Consensus       183 ~~~~v~l~~p~nptG--~~~~~~~l~~i~~  210 (319)
                      +...++.+....+.+  .-.+.++++++.+
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~  109 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIID  109 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence            445555443322322  2345566665544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	7e-47
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-45
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	1e-43
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	6e-33
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	5e-30
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	7e-25
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-24
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	2e-22
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	9e-22
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	1e-20
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	2e-20
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	9e-20
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	1e-18
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	7e-18
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-17
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	6e-15
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	6e-15
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	1e-14
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	2e-14
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	5e-14
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	2e-11
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	3e-10
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	4e-10
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	3e-09
d1p3wa_	391	c.67.1.3 (A:) Cysteine desulfurase IscS {Escherich	6e-07
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	4e-05
d1vefa1	387	c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine a	3e-04
d1eg5a_	376	c.67.1.3 (A:) NifS-like protein/selenocysteine lya	4e-04
d2byla1	404	c.67.1.4 (A:36-439) Ornithine aminotransferase {Hu	4e-04
d1z7da1	404	c.67.1.4 (A:7-410) Ornithine aminotransferase {Pla	5e-04
d1jf9a_	405	c.67.1.3 (A:) NifS-like protein/selenocysteine lya	0.001

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  160 bits (405), Expect = 7e-47
 Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 7/232 (3%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100
           +     L+ L  G+P     F T     +A   ++   +   Y+   GI   R A+A+  
Sbjct: 27  RRQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGKTK-YAPPAGIPELREALAEKF 81

Query: 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH 160
            R+    ++P++  +T+G +QA+  +   +  PG  +++  P +  Y      +   V  
Sbjct: 82  RRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVE 141

Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
            + LP +G+  D + V       T ALV+ +P NP G VY  + L+ +A  A +    ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
           +DE+Y+HL +    F P  V       LT+   +K + + GWR+G+      
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPE--HTLTVNGAAKAFAMTGWRIGYACGPKE 251

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  157 bits (397), Expect = 1e-45
 Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 7/226 (3%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           + +I LG G+P     F T     +    ++       Y   +G+L  R AIA+ L +  
Sbjct: 25  KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQN 79

Query: 105 PYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163
             +  P  ++ + LG  QA  + L+   + G  +L+P P F  Y      +  +      
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139

Query: 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
                + +++D ++    + T AL+I +P NP G V T + L++IA+   +  ++VI+DE
Sbjct: 140 YEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDE 199

Query: 224 VYDHLAFGNTPFVPM-GVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
           VY+H  + +     +  + G     +T+   SK + + GWRLG++ 
Sbjct: 200 VYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 245

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  152 bits (384), Expect = 1e-43
 Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 7/234 (2%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100
           K +   +     G+P     F T    V+A   ++   +   Y    G    R AIA  L
Sbjct: 26  KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGKTR-YGPAAGEPRLREAIAQKL 80

Query: 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH 160
            RD       D++ +T G  Q+I  ++  +  PG  +++P P +  Y      +      
Sbjct: 81  QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVI 140

Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
                   ++V  + +       T  LV   P NP G VYT   ++ IA+ A + G+ V+
Sbjct: 141 LPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVL 200

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLVTSDP 272
           +DE+Y+ + + +   + +G          +     +K + + GWR+G+L    P
Sbjct: 201 SDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP 254

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  124 bits (311), Expect = 6e-33
 Identities = 39/295 (13%), Positives = 85/295 (28%), Gaps = 58/295 (19%)

Query: 12  WGFKANEELKTASGITVRGVLNSLL--------------ENLNKNDTRPLIP-----LGH 52
           W  KA EE +  + I       + L                    D    I      +  
Sbjct: 4   WTMKAAEEAEAVANINCSEHGRAFLDGIISEGSPKCECNTCYTGPDCSEKIQGCSADVAS 63

Query: 53  GDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA--RRAIADYLNRDLPYKLSP 110
           GD      +        A++ S        ++     +     + I +          + 
Sbjct: 64  GDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVV--GNAAA 121

Query: 111 DDVYLTLGC--TQAIEVILTVLAR--------PGANILLPRPGFPYYEARATHSHLEVRH 160
            D Y+  G   TQ I  ++  L+         P + ++   P +P +  +  +   +   
Sbjct: 122 KDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV 181

Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
           +          +      +++      ++ +P NP G +                 ++  
Sbjct: 182 WAG--------NAANYVNVSNPEQYIEMVTSPNNPEGLLRH--------------AVIKG 219

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275
              +YD + +    + P+         + L ++SK     G R GW +  D +  
Sbjct: 220 CKSIYDMVYYWPH-YTPI--KYKADEDILLFTMSKFTGHSGSRFGWALIKDESVY 271

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  115 bits (288), Expect = 5e-30
 Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 5/258 (1%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
             +I L  GDP  F  F+      +A   +++    N Y  + G+   R+AI +   R  
Sbjct: 30  IKVIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKN 87

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
              ++PDDV +T   T+A+++I   L  PG  IL+P P +P Y         +   +  +
Sbjct: 88  GVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTI 147

Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
             + W+ D+D +     + T A+ +INP NP G +Y  + L++I   A +  I VI+DE+
Sbjct: 148 EEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEI 207

Query: 225 YDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284
           YD + +      P  +    VPV+ +  +SK +   GWRLG++   DP   L +  + ++
Sbjct: 208 YDLMTYEGEHISPGSLTKD-VPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE--VREA 264

Query: 285 IKSFLNISSDPATFIQFL 302
           I     I   P T  QF 
Sbjct: 265 IDRLARIRLCPNTPAQFA 282

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  100 bits (250), Expect = 7e-25
 Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 5/222 (2%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
             +I L  G+P     F T    V+  V  ++      Y+   GI   R  IA  +    
Sbjct: 28  EDVINLTAGEPD----FPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRIGERY 82

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
              +SPD V +T G  QA+      L  PG  +++  P +  Y  +   +   V   +  
Sbjct: 83  KKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETF 142

Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
            +K ++  L+ VE L    T A++I +P NP G VY  + L+ +   AKK    +I+DEV
Sbjct: 143 MSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEV 202

Query: 225 YDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
           YD L + +     + V      ++ +   SK   + GWR+G+
Sbjct: 203 YDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY 244

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 47/302 (15%), Positives = 86/302 (28%), Gaps = 27/302 (8%)

Query: 18  EELKTASGITVRGVLNSLLENLNKNDTRP-LIPLG-------HGDPSAFPSFRTASVAVD 69
           +++   +G  +  ++        K D R   + L         G      +   A   ++
Sbjct: 3   QKVDAYAGDPILTLMERF-----KEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLN 57

Query: 70  AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV---- 125
           A  H         Y    G+   R AIA  L       L    V        +  +    
Sbjct: 58  AQPHGASL-----YLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGA 112

Query: 126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL---ADE 182
                  P + + +  P +  + A    +  EV  +         V  + + A       
Sbjct: 113 DFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPA 172

Query: 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP--MGV 240
            ++ L+     NP G   T      + E  K   ++   D  Y     G          +
Sbjct: 173 RSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAI 232

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQ 300
             + +P L   S SK + + G R+G L     +       +     +     S P  F  
Sbjct: 233 ASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGA 292

Query: 301 FL 302
            +
Sbjct: 293 QV 294

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (234), Expect = 2e-22
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 17/235 (7%)

Query: 45  RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-ARFNCYSSTVGILPARRAIADYLNRD 103
             ++ LG G    FP F     AV+A  H+V      N Y+ T G  P  + +A +    
Sbjct: 25  HDVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80

Query: 104 LPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFD 162
           L  ++ P   V +T+G   A+      L   G  +++  P F  YE     +        
Sbjct: 81  LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVS 140

Query: 163 LLP----------AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
           L P          +  W++D   +       T ALV+  P NP G V++ + L+ +A   
Sbjct: 141 LKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLC 200

Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGW 266
           ++  ++ I DEVY  + +     + +     +    LT+GS  K +   GW++GW
Sbjct: 201 QQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGW 255

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score = 92.7 bits (229), Expect = 9e-22
 Identities = 37/273 (13%), Positives = 73/273 (26%), Gaps = 34/273 (12%)

Query: 18  EELKTASGITVRGVLNSLLENLNKNDTRP-LIPLG-------HGDPSAFPSFRTASVAVD 69
            E+  A  + V  ++        + D  P  + LG          P   P  R     + 
Sbjct: 7   AEVPQAQPVLVFKLIADF-----REDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIA 61

Query: 70  AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD---------DVYLTLGCT 120
                        Y   +G+   R   +     D    L                     
Sbjct: 62  NNSSLNHE-----YLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGA 116

Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEAL 179
           + +             + +  P +  +    T +  +          +   +DL    + 
Sbjct: 117 EFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSD 176

Query: 180 AD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236
            +   E ++ ++     NP G   T +  ++IA   K+  +    D  Y   A GN    
Sbjct: 177 LENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKD 236

Query: 237 PMGVF---GSIVPVLTLGSISKRWIVPGWRLGW 266
              +         +    S SK + +   R+G 
Sbjct: 237 AWAIRYFVSEGFELFCAQSFSKNFGLYNERVGN 269

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score = 89.7 bits (221), Expect = 1e-20
 Identities = 40/276 (14%), Positives = 83/276 (30%), Gaps = 31/276 (11%)

Query: 18  EELKTASGITVRGVLNSLLENLNKNDTRP-LIPLG-------HGDPSAFPSFRTASVAVD 69
             ++      + G+           D R   + LG       +G P   PS + A   + 
Sbjct: 6   NNIELLPPDALFGIKQRY-----GQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIH 60

Query: 70  AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTV 129
                  S+  + Y    G+       A  +       L  D V      +    + ++ 
Sbjct: 61  ND-----SSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISA 115

Query: 130 LA----RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT- 184
                  P   + L +P +  + A   +  L+   +     +   +DL+       +   
Sbjct: 116 KFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPE 175

Query: 185 --VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP----- 237
             + ++     NP G   T +   +I +       + + D  Y   A G+          
Sbjct: 176 GSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRL 235

Query: 238 -MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
            +    ++ PV    S +K   + G R+G    +  
Sbjct: 236 GVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALT 271

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score = 88.5 bits (218), Expect = 2e-20
 Identities = 46/266 (17%), Positives = 84/266 (31%), Gaps = 28/266 (10%)

Query: 18  EELKTASGITVRGVLNSLLENLNKNDTRP-LIPLG-------HGDPSAFPSFRTASVAVD 69
           E +  A    + G+ +       + D RP  I LG        G      S +       
Sbjct: 3   ENITAAPADPILGLADLF-----RADERPGKINLGIGVYKDETGKTPVLTSVK------K 51

Query: 70  AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTV 129
           A  + + +     Y    GI    R   + L       ++               + +  
Sbjct: 52  AEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAA 111

Query: 130 LARPGAN----ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--- 182
                      + +  P +P +++    + LEVR +    A+   +D DA+    +E   
Sbjct: 112 DFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQA 171

Query: 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP--MGV 240
             V L      NP G   T +  Q +A+ + + G + + D  Y   A G           
Sbjct: 172 GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAF 231

Query: 241 FGSIVPVLTLGSISKRWIVPGWRLGW 266
                 ++   S SK + +   R+G 
Sbjct: 232 AAMHKELIVASSYSKNFGLYNERVGA 257

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score = 86.6 bits (213), Expect = 9e-20
 Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 9/226 (3%)

Query: 47  LIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
           +I L  G   P  FP      +AV+ +     + +   Y +T G  P R A+A ++ +  
Sbjct: 31  VISLAGGLPAPETFPVETIKKIAVEVLEEH--ADKALQYGTTKGFTPLRLALARWMEKRY 88

Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
              +S  ++    G  QA+++I  V   PG  I++  P +        +   E     L 
Sbjct: 89  DIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLD 148

Query: 165 P----AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
                    E  L+ +        +   +    NP G   +    +K+ E A +   +++
Sbjct: 149 DKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIV 208

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
            D  Y  L +   P  P+  F     V+ LG+ SK  + PG+R+GW
Sbjct: 209 EDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGW 253

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score = 83.5 bits (205), Expect = 1e-18
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 19/204 (9%)

Query: 83  YSSTVGILPARRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140
           +    G+   ++A+ D++   R       P+ + LT G T A E  +  LA PG  +L+P
Sbjct: 80  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIP 139

Query: 141 RPGFP-YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPG 193
            P +P +       + +E+       + G+++   A+E    E          +++ NP 
Sbjct: 140 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPS 199

Query: 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM----------GVFGS 243
           NP G   T   L  +    +  GI +I+DE+Y   AF +  F+ +               
Sbjct: 200 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 259

Query: 244 IVPVLTLGSISKRWIVPGWRLGWL 267
              V  + S+SK   +PG+R+G +
Sbjct: 260 WQRVHVVYSLSKDLGLPGFRVGAI 283

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score = 81.2 bits (199), Expect = 7e-18
 Identities = 40/246 (16%), Positives = 72/246 (29%), Gaps = 25/246 (10%)

Query: 41  KNDTRP-LIPLG-------HGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA 92
           K DT    + LG       +G P      R       A            Y    G+   
Sbjct: 23  KRDTNSKKMNLGVGAYRDDNGKPYVLNCVR------KAEAMIAAKKMDKEYLPIAGLADF 76

Query: 93  RRAIADYLNRDLPYKLSPDDVYLTLG-----CTQAIEVILTVLARPGANILLPRPGFPYY 147
            RA A+    +              G       +     L    +   ++ LP+P +  +
Sbjct: 77  TRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNH 136

Query: 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALA---DENTVALVIINPGNPCGNVYTYQH 204
                 + L+++ +     K   +D            E ++ L+     NP G     + 
Sbjct: 137 TPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQ 196

Query: 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG---VFGSIVPVLTLGSISKRWIVPG 261
            +++A   KK  ++   D  Y   A G+               + V+   S +K   + G
Sbjct: 197 WKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYG 256

Query: 262 WRLGWL 267
            R G  
Sbjct: 257 ERAGAF 262

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score = 80.0 bits (196), Expect = 2e-17
 Identities = 42/240 (17%), Positives = 74/240 (30%), Gaps = 20/240 (8%)

Query: 41  KNDTRP-LIPLG-------HGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA 92
           + D R   I LG        G      +         A    + +     Y+   G    
Sbjct: 21  RADPRQGKIDLGVGVYKDATGHTPIMRAVH------AAEQRMLETETTKTYAGLSGEPEF 74

Query: 93  RRAIADYLNRDLPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA 151
           ++A+ + +  D     +      +         + L  +A P   + +  P +P + +  
Sbjct: 75  QKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIM 134

Query: 152 THSHLEVRHFDLLPA---KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKI 208
               L V+ +    A         + A  A A +  + L+     NP G   T     +I
Sbjct: 135 NFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEI 194

Query: 209 AETAKKLGIMVIADEVYDHLAFGN--TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
           A   +K G + + D  Y     G          +   I  VL   S SK + +   R G 
Sbjct: 195 ASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGC 254

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score = 72.7 bits (177), Expect = 6e-15
 Identities = 42/201 (20%), Positives = 79/201 (39%), Gaps = 17/201 (8%)

Query: 83  YSSTVGILPARRAIADYLNR--DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140
           +    G+   R+AIA ++ +      +  P+ V +  G T A E I+  LA PG   L+P
Sbjct: 79  FQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVP 138

Query: 141 RPGFP-YYEARATHSHLEVRHFDLLPAKGWEVDL------DAVEALADENTVALVIINPG 193
            P +P +       + +++       +  +++              ++     L++ NP 
Sbjct: 139 SPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPS 198

Query: 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP------- 246
           NP G       L+ +     +  I ++ DE+Y    F    FV +               
Sbjct: 199 NPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKD 258

Query: 247 -VLTLGSISKRWIVPGWRLGW 266
            V  + S+SK   +PG+R+G 
Sbjct: 259 LVHIVYSLSKDMGLPGFRVGI 279

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 72.5 bits (176), Expect = 6e-15
 Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 15/220 (6%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           + LG G    FPS       ++A+  ++   R + Y+   G+   R A+A+       + 
Sbjct: 28  VNLGQG----FPSNPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEE------FA 75

Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167
           + P+ V +T G T+A+ V+L  L  PG  +++  P F  Y   A  +  + R   L    
Sbjct: 76  VEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP 135

Query: 168 GWEV-DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
                DL A+E      T AL++  P NP G V+  + L+ IA  A+   + +I+DEVYD
Sbjct: 136 EGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYD 195

Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
            L +G  P             +       R    G+R+GW
Sbjct: 196 ELYYGERPRRLREFAPERTFTVGSAGK--RLEATGYRVGW 233

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 71.8 bits (174), Expect = 1e-14
 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 9/228 (3%)

Query: 41  KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100
           K     +  L  G P      +T  V  + I           YS + GI   R A A Y 
Sbjct: 24  KKRGVRIHHLNIGQPD----LKTPEVFFERIYE--NKPEVVYYSHSAGIWELREAFASYY 77

Query: 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH 160
            R     + P++V +T G ++AI     V+A PG  IL+  P +  Y A A  + +++  
Sbjct: 78  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 137

Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
                 +G+ +    +E+  +E T  +V+ NP NP G VY    ++ + E A++ G+ +I
Sbjct: 138 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 196

Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268
            DEVY              +      V+ + S+SK++   G R+G L+
Sbjct: 197 VDEVYSE--IVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLI 242

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 71.0 bits (172), Expect = 2e-14
 Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 16/231 (6%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLP 105
           + LG G    FP +     A++A+  +  S     N Y+   G     +A++   ++ + 
Sbjct: 29  LNLGQG----FPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVD 84

Query: 106 YKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
             ++P   V +T+G  +A+   +      G  +++  P F  YE     +    R   L 
Sbjct: 85  RTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLK 144

Query: 165 PAKG--------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
           P K         W +D + +EAL +E T  ++I  P NP G V     L+ +A   KK  
Sbjct: 145 PNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWN 204

Query: 217 IMVIADEVY-DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
           ++ ++DEVY   +           + G     +T+GS  K + + GW++GW
Sbjct: 205 VLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW 255

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 69.9 bits (169), Expect = 5e-14
 Identities = 76/254 (29%), Positives = 131/254 (51%), Gaps = 11/254 (4%)

Query: 32  LNSLLENLNKN-DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
           + ++ +N   +   +P+I L  GDP+   +  T++  +  +  ++ S   N Y  TVG  
Sbjct: 16  IRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP 75

Query: 91  PARRAIADYLNR------DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF 144
            AR A+A +         +L   +  D+V L  G +  I + +T +   G   L+P+PGF
Sbjct: 76  EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGF 135

Query: 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204
           P+YE       + +  ++  P   WE DLD +  L D+ T  L++ NP NPCG+ ++ +H
Sbjct: 136 PHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKH 195

Query: 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP----MGVFGSIVPVLTLGSISKRWIVP 260
           ++ I   A++L + + +DE+Y  + F           +  F + VP + LG  +K  +VP
Sbjct: 196 VEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVP 255

Query: 261 GWRLGWLVTSDPNG 274
           GWRLGWL+  DP+G
Sbjct: 256 GWRLGWLLYVDPHG 269

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 61.7 bits (148), Expect = 2e-11
 Identities = 45/220 (20%), Positives = 73/220 (33%), Gaps = 6/220 (2%)

Query: 48  IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107
           I L  G    FP F       + + H V     N Y+   G+   R AIA    R   Y+
Sbjct: 29  INLSQG----FPDFDGPRYLQERLAHHVA-QGANQYAPMTGVQALREAIAQKTERLYGYQ 83

Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167
              D                        + ++         A A      +     L   
Sbjct: 84  PDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP 143

Query: 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
            + VD     AL  E T  +++  P NP   V+       + +      I VI+DEVY+H
Sbjct: 144 HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEH 203

Query: 228 LAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGW 266
           + F       +     +    + + S  K + + GW++G+
Sbjct: 204 INFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGY 243

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 58.0 bits (139), Expect = 3e-10
 Identities = 26/183 (14%), Positives = 52/183 (28%), Gaps = 17/183 (9%)

Query: 81  NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140
               S+            +L  D       D        + AI   +  L        LP
Sbjct: 44  TYIGSSYFAEKVNEYGLKHLGGD-----ENDKCVGFNRTSSAILATILALKPKKVIHYLP 98

Query: 141 -RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199
             PG P  E      + +    D          +  +    D++T+ ++  +  +    V
Sbjct: 99  ELPGHPSIERSCKIVNAKYFESD---------KVGEILNKIDKDTLVIITGSTMDL--KV 147

Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259
              ++ +K+  TAK    +V  D+             P    G+ + V +   + +    
Sbjct: 148 IELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRG 207

Query: 260 PGW 262
              
Sbjct: 208 GLL 210

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 57.9 bits (138), Expect = 4e-10
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%)

Query: 47  LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
           L+P    D      F TA   ++A+   +    F  YS          AIA + +     
Sbjct: 1   LLPFTISDMD----FATAPCIIEALNQRLMHGVFG-YSRWKND-EFLAAIAHWFSTQHYT 54

Query: 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH--FDLL 164
            +    V         +  ++   +  G  +++  P +  +      +   V     +  
Sbjct: 55  AIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQ 114

Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
               +         LA      +++ +P NP G V+T   L+ +A+  ++ G+ VI+DE+
Sbjct: 115 ADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEI 174

Query: 225 YDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270
           +  + +G  P +P            L S SK + +P     + +  
Sbjct: 175 HMDMVWGEQPHIPWSNVARGDWA-LLTSGSKSFNIPALTGAYGIIE 219

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score = 55.2 bits (131), Expect = 3e-09
 Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 9/240 (3%)

Query: 36  LENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95
           + + N      ++PL   D      F+     ++ +   +          T      ++ 
Sbjct: 22  MYSQNPEVGNEVVPLSVADME----FKNPPELIEGLKKYLDE---TVLGYTGPTEEYKKT 74

Query: 96  IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANI-LLPRPGFPYYE-ARATH 153
           +  ++     + +  D +  T G   A+   +    +PG  + ++    +P++   +   
Sbjct: 75  VKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQE 134

Query: 154 SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
             +                    +   D+N  AL+  +P NP G V+    LQKI +   
Sbjct: 135 RKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVL 194

Query: 214 KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
           K  +M+ +DE++  L                +   T+   +         +G       N
Sbjct: 195 KSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN 254

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} Length = 391

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

 Score = 48.0 bits (113), Expect = 6e-07
 Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 26/207 (12%)

Query: 92  ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILT----VLARPGANILLPRPGFPYY 147
           AR  IAD +  D      P ++  T G T++  + +        + G +I+  +      
Sbjct: 53  ARNQIADLVGAD------PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAV 106

Query: 148 EARATHSHLEVRHFDLL---PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204
               T   LE   F++    P +   +DL  +EA   ++T+ + I++  N  G V     
Sbjct: 107 --LDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAA 164

Query: 205 LQKI---------AETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255
           + ++          +  + +G + I            +     G  G  +  L +    +
Sbjct: 165 IGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPR 222

Query: 256 RWIVPGWRLGWLVTSDPNGILQDSGIV 282
             I      G       +G L    IV
Sbjct: 223 VRIEAQMHGGGHERGMRSGTLPVHQIV 249

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 42.5 bits (98), Expect = 4e-05
 Identities = 29/171 (16%), Positives = 52/171 (30%), Gaps = 11/171 (6%)

Query: 45  RPLIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR 102
           +  I  G G  DP  FP    A +A + I           YS+T G    ++ I   L R
Sbjct: 38  KDAISFGGGVPDPETFPRKELAEIAKEII--EKEYHYTLQYSTTEGDPVLKQQILKLLER 95

Query: 103 DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFD 162
                   +D  +    +Q    ++  L     +  +           A   +L      
Sbjct: 96  MYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVV 155

Query: 163 LLPAKGWEVDL-------DAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206
            L   G ++++               +     V+ N  NP G   + +  +
Sbjct: 156 PLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 206

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} Length = 387

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 172 DLDAVEALADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229
           D++A++   DE T A VI+ P  G       T + L+   E  ++ G ++I DE+     
Sbjct: 166 DVEALKRAVDEETAA-VILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEI--QTG 222

Query: 230 FGNTPFVPMGVFGSIVPVLTLGS 252
            G T          IVP +   +
Sbjct: 223 MGRTGKRFAFEHFGIVPDILTLA 245

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} Length = 376

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.3 bits (90), Expect = 4e-04
 Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 18/154 (11%)

Query: 67  AVDAIVHSVRSARFNCYS-------STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119
            ++ ++   R    N  S       + + +  AR  +A  L       +SP +++ T   
Sbjct: 17  VLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG------VSPSEIFFTSCA 70

Query: 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHS--HLEVRHFDL--LPAKGW-EVDLD 174
           T++I  IL  +A             P        +  +L ++ F +  +P      V L+
Sbjct: 71  TESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLE 130

Query: 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKI 208
            +E L DE+T  + I+   N  G +   + + +I
Sbjct: 131 ELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRI 164

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 4e-04
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 172 DLDAVEALADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229
           DL A+E    +  VA  ++ P  G     V    +L  + E   +  ++ IADE+     
Sbjct: 176 DLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEI--QTG 233

Query: 230 FGNTPFVPMGVFGSIVP-VLTLG 251
              T       + ++ P ++ LG
Sbjct: 234 LARTGRWLAVDYENVRPDIVLLG 256

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

 Score = 39.4 bits (91), Expect = 5e-04
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNV 199
           G       A+ +     +F     +  +V  D +EAL +E     V   I+ P      V
Sbjct: 142 GRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGV 201

Query: 200 YTY--QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLG 251
                 +LQ + +  KK  ++ +ADEV      G T  +      ++ P V+ LG
Sbjct: 202 IVPSDNYLQGVYDICKKYNVLFVADEV--QTGLGRTGKLLCVHHYNVKPDVILLG 254

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} Length = 405

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

 Score = 38.4 bits (88), Expect = 0.001
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 26/175 (14%)

Query: 67  AVDAIVHSVRSARFNCYSS--------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
            +DA     R      +          T  +   R+  + ++N       S +++    G
Sbjct: 38  VIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEELVFVRG 92

Query: 119 CTQAIEVILTVLAR----PGANILLPRPGFP----YYEARATHSHLEVRHFDLLPAKGWE 170
            T+ I ++           G NI++ +         ++        E+R   L P     
Sbjct: 93  TTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GT 150

Query: 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
           + L+ +  L DE T  L I +  N  G   T   L ++   A + G  V+ D   
Sbjct: 151 LQLETLPTLFDEKTRLLAITHVSNVLG---TENPLAEMITLAHQHGAKVLVDGAQ 202

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	319
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.96
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.91
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.91
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.87
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.81
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.78
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.78
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.78
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.74
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.73
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.71
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.7
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.69
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.68
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.67
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.67
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.65
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.65
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.64
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.62
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.6
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.58
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.57
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.55
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.55
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.54
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.53
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.52
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.51
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.5
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.45
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.44
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.42
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.41
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.38
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.38
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.37
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.32
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.28
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.24
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.24
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.22
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.22
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.18
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.18
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.17
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.15
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.15
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.11
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.1
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.0
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	98.96
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	98.93
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	98.84
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	98.8
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	98.59
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	98.59
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	98.51
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	97.98
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	97.55
d1ofux_	119	Hypothetical protein PA3008 {Pseudomonas aeruginos	89.03
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	83.67
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	83.24
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	83.04
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	82.75
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	82.41
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	82.24
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	81.72
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	80.59
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	80.54

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.6e-48  Score=351.51  Aligned_cols=276  Identities=24%  Similarity=0.420  Sum_probs=244.9

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|+|++.+++|.++.+.+..++ ++ .++.++|+|+.|+|+    +++|+.+++++.+++.++. .+|++..|.++||++
T Consensus         4 ~~~r~~~~~~s~~~~i~~~a~~-~~-~~G~~vi~l~~g~p~----~~~p~~i~~a~~~~~~~~~-~~Y~~~~G~~~lR~~   76 (382)
T d1b5pa_           4 LSRRVQAMKPSATVAVNAKALE-LR-RQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREA   76 (382)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHH-HH-HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred             HHHHHHhCCCCHHHHHHHHHHH-HH-hCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCCCCHHHHHH
Confidence            5889999999999999876654 33 347889999999987    7899999999999887754 589999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|.++++++|++|+|+++|+..++++++++||+|+++.|+|..|...++..|.+++.++..+++++.+|+++
T Consensus        77 ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  156 (382)
T d1b5pa_          77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER  156 (382)
T ss_dssp             HHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHhhhhhhcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888889999999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +++.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|+++.+++....+...  ..+++|+++|+||
T Consensus       157 l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK  234 (382)
T d1b5pa_         157 VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVNGAAK  234 (382)
T ss_dssp             HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEEESTT
T ss_pred             HHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHc--CCCCEEEEecchh
Confidence            99999989999999999999999999999999999999999999999999999998766544432  3368999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL  308 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~  308 (319)
                      .|++||+|+||+++++        ++++.+...... ...++.+.|.++...+.
T Consensus       235 ~~~~~GlR~G~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (382)
T d1b5pa_         235 AFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALT  280 (382)
T ss_dssp             TTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred             hccCcHhheEEEEECH--------HHHHHHHHHHHhcccCcccccccccccccc
Confidence            9999999999999864        577777766653 55677888877766444

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=9.7e-48  Score=351.82  Aligned_cols=285  Identities=21%  Similarity=0.346  Sum_probs=249.7

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      ++|+++++++++.+..+.+...+ + +..+.++|+|+.|+|+    +++|+.+.+++.+.++.+. .+|++..|.++||+
T Consensus         2 ~~~~~~~~~~~s~~~~i~~~a~~-~-~~~g~~vi~l~~G~p~----~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lR~   74 (388)
T d1j32a_           2 KLAARVESVSPSMTLIIDAKAKA-M-KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGK-TRYGPAAGEPRLRE   74 (388)
T ss_dssp             CCCHHHHTSCCCSSTTTHHHHHH-H-HTTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred             chhhHhhcCCcCHHHHHHHHHHH-H-HHCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHH
Confidence            57889999999988777765433 3 2346799999999987    7899999999999887654 58999999999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968           95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD  174 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  174 (319)
                      ++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|..|...++..|.+++.++...+++|.+|++
T Consensus        75 aia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~  154 (388)
T d1j32a_          75 AIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPE  154 (388)
T ss_dssp             HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHH
T ss_pred             HHHHHHHHhcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888888999999


Q ss_pred             HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEec
Q 020968          175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGS  252 (319)
Q Consensus       175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s  252 (319)
                      ++++.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++.....  .+++|+++|
T Consensus       155 ~l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S  234 (388)
T d1j32a_         155 QIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSG  234 (388)
T ss_dssp             HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEE
T ss_pred             HHHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecC
Confidence            999999999999999999999999999999999999999999999999999999998877777665543  257999999


Q ss_pred             CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhcccccc
Q 020968          253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFL  314 (319)
Q Consensus       253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~  314 (319)
                      |||.|++||+|+||+++++        ++++.+..... ....++...|.++...+....+|.
T Consensus       235 ~SK~~~~~GlRvG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~  289 (388)
T d1j32a_         235 FAKTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCV  289 (388)
T ss_dssp             STTTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHH
T ss_pred             ChhhhhcchhHeEEEEECH--------HHHHHHHHhhhhccccccHHHHHHHhhcccchHHHH
Confidence            9999999999999999864        57777776665 456778899998877555444443

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=6.3e-47  Score=346.28  Aligned_cols=274  Identities=24%  Similarity=0.449  Sum_probs=242.5

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      ++|.|++.+.+|+||.+++...+      .+++|+|+.|+|+    +++|+.+++++.++++.+. .+|++..|.++||+
T Consensus         1 ~~s~~~~~~~~s~ir~~~~~~~~------~~dvi~l~~g~p~----~~~p~~v~~~~~~a~~~~~-~~Y~~~~G~~~lr~   69 (388)
T d1gdea_           1 ALSDRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLLELRE   69 (388)
T ss_dssp             CHHHHHHHSCCCHHHHHHHHHHH------CTTCEECCCCSCC----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred             ChhhhhhhCCccHHHHHHHHHhC------CCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCc-cCCCCCcCCHHHHH
Confidence            46899999999999999985432      5789999999987    7899999999999987654 58999999999999


Q ss_pred             HHHHHHhhhCCC-CCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           95 AIADYLNRDLPY-KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        95 ~ia~~~~~~~g~-~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      ++++++.+..+. ....++|++|+|+++++..++.+++++||+|+++.|+|..|...++..|.+++.++.+.+++|++|+
T Consensus        70 aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  149 (388)
T d1gdea_          70 AIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNV  149 (388)
T ss_dssp             HHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCH
T ss_pred             HHHHHHHhhccccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCH
Confidence            999999875543 4566789999999999999999999999999999999999999999999999999998888899999


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEec
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS  252 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s  252 (319)
                      +++++.++++++++++++||||||.+++.+++++|+++|++++++||+||+|+++.+++.+..++..+.. .+++|+++|
T Consensus       150 ~~l~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S  229 (388)
T d1gdea_         150 DELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNG  229 (388)
T ss_dssp             HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEE
T ss_pred             HHHHHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeC
Confidence            9999999989999999999999999999999999999999999999999999999998877777666654 468999999


Q ss_pred             CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      |||.|++||+|+||+++++        +++.++...... ...++.+.|.+++.++
T Consensus       230 ~SK~~~~~GlR~G~ii~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  277 (388)
T d1gdea_         230 FSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKAL  277 (388)
T ss_dssp             STTTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHH
T ss_pred             ChhhccCccccEEEEEeec--------cchhhhhhccccccccccccchhhHHHHH
Confidence            9999999999999999864        577777776653 5567888898888744

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=3.4e-45  Score=335.60  Aligned_cols=294  Identities=28%  Similarity=0.497  Sum_probs=241.3

Q ss_pred             CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHH
Q 020968           14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPAR   93 (319)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr   93 (319)
                      +++|.|++.+. ..||++.... +.+++ .+.++|+|+.|+|.. ..+++|+.+++++.+++..+ .++|++..|.++||
T Consensus         2 ~~~s~r~~~~~-~~ir~i~~~a-~~l~~-~G~~vi~l~~G~P~~-~df~~p~~i~~a~~~a~~~~-~~~Y~~~~G~~~LR   76 (395)
T d1xi9a_           2 IRASKRALSVE-YAIRDVVLPA-RELEK-KGIKVIRLNIGDPVK-FDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELR   76 (395)
T ss_dssp             CCCCHHHHTCC-C-------CH-HHHHH-TTCCCEECCCCCGGG-TTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHH
T ss_pred             ccchhccccCc-HHHHHHHHHH-HHHHH-CCCCeEECCCCCCCC-CCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHH
Confidence            46788999884 6899988654 33433 478899999999842 23789999999999998765 35799999999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        94 ~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      +++++++++.+|..+++++|++|+|+++++.+++.+++++||+|++++|+|..|...++..|.+++.++....++|.+|+
T Consensus        77 ~aia~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~  156 (395)
T d1xi9a_          77 KAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDI  156 (395)
T ss_dssp             HHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECH
T ss_pred             HHHHHhhhhcccccccccccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988888899999


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecC
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI  253 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~  253 (319)
                      +++++.+.++++++++++||||||.+++.+++++|+++|++++++||.|++|.++.+++.. .+.......+++|+++||
T Consensus       157 ~~~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~vi~~~S~  235 (395)
T d1xi9a_         157 DDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEH-ISPGSLTKDVPVIVMNGL  235 (395)
T ss_dssp             HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCC-CCHHHHCSSSCEEEEEES
T ss_pred             HHHHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccc-cchhhcCCCCCEEEEeCc
Confidence            9999999889999999999999999999999999999999999999999999999987644 344445666789999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      ||.|++||+|+||++++++....  ..+.+..........+++.++|.++..++....+|.+
T Consensus       236 SK~~~~~GlRvG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~  295 (395)
T d1xi9a_         236 SKVYFATGWRLGYMYFVDPENKL--SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLK  295 (395)
T ss_dssp             TTTTCCGGGCCEEEEEECTTCTT--HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHH
T ss_pred             chhcccchhhcEeeEecCHHHHH--HHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHH
Confidence            99999999999999877644222  1122222222334567788999998886655555543

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.7e-43  Score=323.00  Aligned_cols=291  Identities=28%  Similarity=0.536  Sum_probs=239.5

Q ss_pred             CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968           12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP   91 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~   91 (319)
                      |-.++|.+ .+...+.||.+.+.++.   ...+.++|+|+.|+|+..+...+++.+.+++.+.+.....++|++..|.++
T Consensus         1 ~~~~~~~~-~~~~~~pir~~~~~~~~---~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~   76 (412)
T d1bw0a_           1 WDVSMSNH-AGLVFNPIRTVSDNAKP---SPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPE   76 (412)
T ss_dssp             CCCCCCHH-HHTCCCHHHHHHHTCCC---CCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHH
T ss_pred             CCCChhhc-ccCCccHHHHHHHhcCC---CCCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHH
Confidence            66777855 45667889888764421   123457999999999865556778899999998887777779999999999


Q ss_pred             HHHHHHHHHhhhC------CCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968           92 ARRAIADYLNRDL------PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP  165 (319)
Q Consensus        92 lr~~ia~~~~~~~------g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  165 (319)
                      ||+++|+++++.+      +..+++++|++|+|+++|+..++++++++||+|++++|+|..|...++..|++++.+++++
T Consensus        77 LReaia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~  156 (412)
T d1bw0a_          77 AREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRP  156 (412)
T ss_dssp             HHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEG
T ss_pred             HHHHHHHHHHHhcCcccccCCCCCCCeEEEecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCcccccccccc
Confidence            9999999998764      4457889999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc----c
Q 020968          166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV----F  241 (319)
Q Consensus       166 ~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~----~  241 (319)
                      +++|.++++.+++...+.++++++++||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.+...    .
T Consensus       157 ~~~~~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~  236 (412)
T d1bw0a_         157 ENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF  236 (412)
T ss_dssp             GGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS
T ss_pred             ccccchhhHHHHhhhhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCcccccccccc
Confidence            888999999999999889999999999999999999999999999999999999999999999998765444332    2


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      ....++++++|+||.|+++|+|+||++++++....  ...+...........+++...|.+++..+.
T Consensus       237 ~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (412)
T d1bw0a_         237 ETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALL  301 (412)
T ss_dssp             CCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred             ccccccccccccCccCccCCCCcccccccchhhcc--hhhhhhhccccccccCCchhhhhhcccccc
Confidence            34457899999999999999999999998754221  334444444444444566666666655443

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=5.2e-43  Score=323.33  Aligned_cols=276  Identities=22%  Similarity=0.370  Sum_probs=240.8

Q ss_pred             CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHH
Q 020968           14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILP   91 (319)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~   91 (319)
                      |+++.|+++++++..+++.+...       ..++|+|+.|+|+    +++|+.+++++.+++...  ..++|++..|.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~I~L~~G~Pd----~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~   70 (418)
T d2r5ea1           2 FDLPKRYQGSTKSVWVEYIQLAA-------QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPR   70 (418)
T ss_dssp             CCCCGGGTTCCCCHHHHHHHHHH-------HHCCEECSSSCCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHH
T ss_pred             CchhhhhcCCCCCHHHHHHHHhc-------CCCCEEccCCCCC----CCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHH
Confidence            67889999999999988875443       2478999999987    788999999999988764  2458999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC---
Q 020968           92 ARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK---  167 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~---  167 (319)
                      ||+++|+++.+.+|..+++ ++|++|+|+++|+..++++++++||.|+++.|+|+.|...+...|.+++.++.+++.   
T Consensus        71 lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~  150 (418)
T d2r5ea1          71 LVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGG  150 (418)
T ss_dssp             HHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSS
T ss_pred             HHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEeccccccc
Confidence            9999999999988988885 899999999999999999999999999999999999999999999999999886543   


Q ss_pred             -----CCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          168 -----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       168 -----~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                           .+..+.+++.......++++++++||||||.+++.+++++|+++|++++++||+||+|..+.+++....++..+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~  230 (418)
T d2r5ea1         151 TISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP  230 (418)
T ss_dssp             CEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGST
T ss_pred             chhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccc
Confidence                 256788888888888889999999999999999999999999999999999999999999999877666655543


Q ss_pred             -CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968          243 -SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       243 -~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~  308 (319)
                       ..+++++++|+||.+++||+|+||+++++        ++++.+..... ...+++++.|.+++..+.
T Consensus       231 ~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~  290 (418)
T d2r5ea1         231 GMWERTITIGSAGKTFSLTGWKIGWAYGPE--------ALLKNLQMVHQNCVYTCATPIQEAIAVGFE  290 (418)
T ss_dssp             TTGGGEEEEEEHHHHTTCGGGCCEEEESCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHH
T ss_pred             cccceeeeeecCCccccCCCcccccccccc--------hhhhhhhhcccccccccccchhhhcccccc
Confidence             45689999999999999999999999864        57888877665 456778899988877553

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.5e-42  Score=314.30  Aligned_cols=275  Identities=24%  Similarity=0.367  Sum_probs=240.9

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|+|+.+++.+.++.+.+..++.. +. +.++|+|+.|+|+    +++|+.+++++.+.+..+. .+|++..|.++||++
T Consensus         1 ~~~r~~~~~~~~~~~~~~~a~~~~-~~-G~~vI~l~~G~p~----~~~p~~i~~~~~~~~~~~~-~~Y~~~~G~~~lR~a   73 (375)
T d1o4sa_           1 VSRRISEIPISKTMELDAKAKALI-KK-GEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREG   73 (375)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHH-HT-TCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHH
T ss_pred             CchhhhhCCCCHHHHHHHHHHHHH-HC-CCCeEECCCcCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCcCCHHHHHH
Confidence            478999999999998876554433 33 5789999999987    7889999999999887654 489999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++.+.+|..++++++++|+|+++|+..++++++++||+|++++|+|+.|...+...+.....++....+++.++.+.
T Consensus        74 ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (375)
T d1o4sa_          74 IAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEE  153 (375)
T ss_dssp             HHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHhhhhhccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHH
Confidence            99999998999999999999999999999999999999999999999999999999999999999999888889999999


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      ++.....+++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++.....+...+..+++|+++|+||
T Consensus       154 ~~~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  233 (375)
T d1o4sa_         154 VEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSK  233 (375)
T ss_dssp             HHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTT
T ss_pred             HHHhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechh
Confidence            99988888999999999999999999999999999999999999999999999887766655555566789999999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                      .|++||+|+||+++++        +.++.+...... ....+...|.....
T Consensus       234 ~~~l~G~R~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (375)
T d1o4sa_         234 SHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALK  276 (375)
T ss_dssp             TTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHH
T ss_pred             hccCCccccccccccc--------cchhhhhhhhccccccccccchhhhhh
Confidence            9999999999999864        466766666553 44556666666555

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=320.62  Aligned_cols=276  Identities=22%  Similarity=0.397  Sum_probs=240.6

Q ss_pred             hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-CCCCCCCcCCHHHHHH
Q 020968           17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRA   95 (319)
Q Consensus        17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~   95 (319)
                      ++|+++++++...+..+..       .++++|+|+.|+|+    +++|+.+.+++++++..+. .++|++..|.++||++
T Consensus         4 ~~r~~~~~~~~~~~~~~~~-------~~~dvI~l~~G~p~----~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LRea   72 (418)
T d1w7la_           4 ARRLDGIDYNPWVEFVKLA-------SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKI   72 (418)
T ss_dssp             CGGGTTCCCCTHHHHHHHH-------HTSCCEECCCCSCS----SCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHH
T ss_pred             CccccCCCCCHHHHHHHHh-------CCCCCEECCCCCCC----CCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHH
Confidence            4578888888887776543       26789999999987    7889999999999987653 4589999999999999


Q ss_pred             HHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC---------
Q 020968           96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP---------  165 (319)
Q Consensus        96 ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---------  165 (319)
                      +++++++.+|..+++ ++|++|+|+++++..++++++++||.|+++.|+|+.|...+...|.+.+.++..+         
T Consensus        73 ia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~  152 (418)
T d1w7la_          73 LASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELG  152 (418)
T ss_dssp             HHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSE
T ss_pred             HHHHHHHHhCCCCCcccceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccc
Confidence            999999988888875 6899999999999999999999999999999999999999999999998887654         


Q ss_pred             -CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-
Q 020968          166 -AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-  243 (319)
Q Consensus       166 -~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-  243 (319)
                       ..++.+|.+++.....+.++++++++||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++.++.. 
T Consensus       153 ~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~  232 (418)
T d1w7la_         153 SSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM  232 (418)
T ss_dssp             EGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT
T ss_pred             cccCcccchhhhhccccccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHcccc
Confidence             245677888888888888899999999999999999999999999999999999999999999998877777777654 


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhccc
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRN  311 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~  311 (319)
                      .++++++.|+||.|++||+|+||+++++        +++.+++.... ...+++.+.|.+++.++....
T Consensus       233 ~~~~i~~~S~SK~~~~pG~RvG~~v~~~--------~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~  293 (418)
T d1w7la_         233 WERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQ  293 (418)
T ss_dssp             GGGEEEEEEHHHHTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             ccccceecccCccccCCCCcccccccch--------hhhhhhccccccccccccchhhHHHHHHhhhcc
Confidence            4689999999999999999999999864        58888887776 356789999999888665443

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.6e-42  Score=314.00  Aligned_cols=280  Identities=24%  Similarity=0.338  Sum_probs=232.1

Q ss_pred             chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968           16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA   95 (319)
Q Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   95 (319)
                      +|+|++++.+|.||.+.... +.. +..+.++|+|+.|+|+    +++|+.+.+++.+...  ..++|++..|.++||++
T Consensus         1 ~~~r~~~~~~~~i~~l~~~a-~~~-~~~g~~vi~l~~G~p~----~~~p~~~~~al~~~~~--~~~~Y~~~~G~~~LR~a   72 (389)
T d2gb3a1           1 FSDRVLLTEESPIRKLVPFA-EMA-KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKP--EVVYYSHSAGIWELREA   72 (389)
T ss_dssp             CCHHHHSCCCCTTGGGHHHH-HHH-HHTTCEEEECSSCCCC----SCCCTHHHHHHHHTCC--SSCCCCCTTCCHHHHHH
T ss_pred             CChhhhcCCCCHHHHHHHHH-HHH-HHcCCCEEECCCCCCC----CCCCHHHHHHHHhcCC--CCCCCCCCcCCHHHHHH
Confidence            58899999999999987633 223 2347789999999987    7889999999987543  35689999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968           96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus        96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +++++++.+|..+++++|++|+|+++++..++.+++++||.|+++.|+|..+...+...|.....++.+.. ++..+.+.
T Consensus        73 ia~~~~~~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~  151 (389)
T d2gb3a1          73 FASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRME-EGFAIPQN  151 (389)
T ss_dssp             HHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGG-GTSCCCTT
T ss_pred             HHHHHHHhcCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCccccccccccc-cccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999998887543 33455566


Q ss_pred             HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968          176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK  255 (319)
Q Consensus       176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK  255 (319)
                      +.....++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++..+....  ...++++++.|+||
T Consensus       152 ~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~--~~~~~~~v~~s~sK  229 (389)
T d2gb3a1         152 LESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALS--IESDKVVVIDSVSK  229 (389)
T ss_dssp             GGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGG--SCCTTEEEEEESTT
T ss_pred             hhhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccc--cccccccccccccc
Confidence            6677777889999999999999999999999999999999999999999999998875443332  23467899999999


Q ss_pred             ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      .+++||+|+||++++++       .+.+.+.........++.+.|.++..++...+.+
T Consensus       230 ~~~~~GlRiG~~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (389)
T d2gb3a1         230 KFSACGARVGCLITRNE-------ELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSF  280 (389)
T ss_dssp             TTTCGGGCCEEEECSCH-------HHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHH
T ss_pred             cccCcccceeeeeccch-------hHHHHHhhhhhccccccccccccccccccccchh
Confidence            99999999999998752       3555555555555566777777766644333333

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=2.7e-41  Score=310.20  Aligned_cols=275  Identities=21%  Similarity=0.298  Sum_probs=228.4

Q ss_pred             CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHH
Q 020968           14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILP   91 (319)
Q Consensus        14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~   91 (319)
                      ..+|++++.+++|+||++.+..       +.+++|+|+.|.|+  +...+.+.+.+++.+.+...  ...+|++..|.++
T Consensus         5 ~~~~~~~~~~~~s~ire~~~~~-------~~~~~i~l~~G~P~--~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~   75 (403)
T d1wsta1           5 SFFSEKAMLMKASEVRELLKLV-------ETSDVISLAGGLPA--PETFPVETIKKIAVEVLEEHADKALQYGTTKGFTP   75 (403)
T ss_dssp             GGCCHHHHHCCCHHHHHHHHHH-------TSSSCEECCCCCCC--GGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHH
T ss_pred             HHHHHHHhcCCCcHHHHHHHHh-------CCCCcEECCCCCCC--ccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHH
Confidence            3468999999999999998744       36889999999887  22345677888888776543  2457999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      ||+++|+++++.+|.++++++|++|+|+++++..++.+++++||+|++++|+|..|...+...|.+++.++.+.......
T Consensus        76 lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  155 (403)
T d1wsta1          76 LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVD  155 (403)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHH
T ss_pred             HHHHHHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999865433222


Q ss_pred             CHHHHH-hh---hccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCe
Q 020968          172 DLDAVE-AL---ADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV  247 (319)
Q Consensus       172 d~~~l~-~~---l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~v  247 (319)
                      ...... ..   .+....++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++.+..++......+++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~  235 (403)
T d1wsta1         156 LLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRV  235 (403)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCE
T ss_pred             cccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcE
Confidence            222211 11   12344577788999999999999999999999999999999999999999998887788777778899


Q ss_pred             EEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHH
Q 020968          248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSR  306 (319)
Q Consensus       248 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~  306 (319)
                      ++++|+||.+ ++|+|+||+++++        ++++.+..... ....++...|.+.+..
T Consensus       236 i~~~S~SK~~-~~G~RiG~~i~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~  286 (403)
T d1wsta1         236 IYLGTFSKIL-APGFRIGWVAAHP--------HLIRKMEIAKQSIDLCTNTFGQAIAWKY  286 (403)
T ss_dssp             EEEEESTTTT-CGGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred             EEEcccccee-cCcccccccccch--------HHHHHHHHHHhhhccccccchhhhHHhh
Confidence            9999999997 5999999999864        57777776654 3556788888887763

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.3e-40  Score=297.99  Aligned_cols=258  Identities=23%  Similarity=0.359  Sum_probs=224.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~a  122 (319)
                      ..++|||+.|.|+    +++|+.+++++.+.+.++ .++|++..|.++||+++|+++++.+|..++++ +|++|+|++++
T Consensus        25 ~~~~i~l~~G~Pd----~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~a   99 (382)
T d1u08a_          25 QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA   99 (382)
T ss_dssp             HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHH
T ss_pred             cCCCEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHH
Confidence            3589999999987    788999999999988765 45899999999999999999999889888876 59999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968          123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY  202 (319)
Q Consensus       123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  202 (319)
                      +.+++++++++||.|++++|+|..+...+...|.....++.+ ..++.+|+++++....++++++++++||||||.+++.
T Consensus       100 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~  178 (382)
T d1u08a_         100 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQ-PPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ  178 (382)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECC-TTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHhhcccccceEEEecccccchhhhhhhccccceecccc-cccccCCHHHHhhhhccCccEEEECCCCccccccccc
Confidence            999999999999999999999999999999999988877764 4667899999999998899999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      +++++|+++|++++++++.|+.|..+.+.+......... ...+++|++.|+||.+++||+|+||+++++        ++
T Consensus       179 ~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~--------~~  250 (382)
T d1u08a_         179 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PI  250 (382)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HH
T ss_pred             ccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccc--------hh
Confidence            999999999999999999999999988876554443332 234689999999999999999999999864        57


Q ss_pred             HHHHHHhhh-hcCCcchHHHHHHHHHHhccccccc
Q 020968          282 VDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFLK  315 (319)
Q Consensus       282 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~  315 (319)
                      +.++..... ...+++.+.|.+++.++....+|.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~  285 (382)
T d1u08a_         251 SAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYL  285 (382)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHH
T ss_pred             HHHHHhhhcccccccccccccccccccccchHHHH
Confidence            888877776 3567899999999996655544443

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=5.2e-40  Score=300.85  Aligned_cols=249  Identities=17%  Similarity=0.302  Sum_probs=210.4

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      ..+.++|+|+.|+|+    +++|+.+++++.++++.+. .+|++  |.++||+++++++++.+|..+++++|++|+|+++
T Consensus        28 ~~g~~vi~l~~g~pd----f~~p~~v~~al~~~~~~~~-~~Y~~--g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~  100 (394)
T d1c7na_          28 EVGNEVVPLSVADME----FKNPPELIEGLKKYLDETV-LGYTG--PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVP  100 (394)
T ss_dssp             TCCTTCCCCCSSSCS----SCCCHHHHHHHHHHHHHCC-CSSBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHH
T ss_pred             hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCC-cCCCC--CCHHHHHHHHHHHHHhcCCCCCCcceEeeccchh
Confidence            346789999999987    8999999999999887653 47853  7899999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccc
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNV  199 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~  199 (319)
                      ++..++++++++||.|+++.|.|.++.......|...+.++... +..+.+|.+.++.... ++++++++++||||||.+
T Consensus       101 al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v  180 (394)
T d1c7na_         101 AVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRV  180 (394)
T ss_dssp             HHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBC
T ss_pred             hhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEeccccccccee
Confidence            99999999999999999999999999999999999988887654 3446789998888764 468899999999999999


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCcceeeEEEeeCCCCCcc
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ  277 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  277 (319)
                      ++.+++++|+++|++++++||+||+|.++.+++..+.+......  .++++++.|+||.|+++|+|+||++++++     
T Consensus       181 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~-----  255 (394)
T d1c7na_         181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-----  255 (394)
T ss_dssp             CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-----
T ss_pred             ccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccCh-----
Confidence            99999999999999999999999999999998766555444332  36789999999999999999999999763     


Q ss_pred             chHHHHHHHHhhhh-cCCcchHHHHHHH
Q 020968          278 DSGIVDSIKSFLNI-SSDPATFIQFLKS  304 (319)
Q Consensus       278 ~~~~~~~~~~~~~~-~~~~~~~~q~~~~  304 (319)
                        .+.+.++..... ...++...|.+++
T Consensus       256 --~i~~~~~~~~~~~~~~~~~~~~~~a~  281 (394)
T d1c7na_         256 --DIRERFTKSRDATSGMPFTTLGYKAC  281 (394)
T ss_dssp             --HHHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred             --hhhhhhhhhhhhccccccccccchhh
Confidence              466777776654 2333334443333

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.9e-40  Score=304.09  Aligned_cols=272  Identities=19%  Similarity=0.243  Sum_probs=226.2

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPA   92 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~l   92 (319)
                      ++|+..+.+.++.||++++.       ..++++|+|+.|.|+  +...+.+.+.+++++.++..  ...+|++..|.++|
T Consensus        15 ~~s~~~~~~~~s~ir~~~~~-------~~~~~~I~l~~G~Pd--~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~L   85 (420)
T d1vp4a_          15 KISKIGQNMKSSIIREILKF-------AADKDAISFGGGVPD--PETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVL   85 (420)
T ss_dssp             HCCHHHHTCCCCCHHHHTTT-------TTSTTCEECCCCSCC--GGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHH
T ss_pred             HHhHHHHhCCCcHHHHHHHH-------hCCCCcEecCCcCCC--CccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHH
Confidence            36777888999999988652       247899999999987  22345677777777776543  24589999999999


Q ss_pred             HHHHHHHHhhhCCCC-CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968           93 RRAIADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV  171 (319)
Q Consensus        93 r~~ia~~~~~~~g~~-~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  171 (319)
                      |+++++++++.+|.. +++++|++|+|+++++.+++.+++++||.|++++|+|..|...++..|.+++.++.++.   ++
T Consensus        86 R~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~---~~  162 (420)
T d1vp4a_          86 KQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GM  162 (420)
T ss_dssp             HHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EE
T ss_pred             HHHHHHHHHHHhCCCCCCHHHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhccccccccc---cc
Confidence            999999999988876 78999999999999999999999999999999999999999999999999999997643   46


Q ss_pred             CHHHHHhhhc---------cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          172 DLDAVEALAD---------ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       172 d~~~l~~~l~---------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      +++.++..+.         ..+.++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....+.....
T Consensus       163 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~  242 (420)
T d1vp4a_         163 DLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG  242 (420)
T ss_dssp             CHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH
T ss_pred             ccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccc
Confidence            7776654331         1234556789999999999999999999999999999999999999999887666666666


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      ..+++++++|+||.+ ++|+|+||+++++        ++++++.+.... ..+++.+.|.+++..+
T Consensus       243 ~~~~~i~~~s~sk~~-~~G~RiG~~~~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~a~~l  299 (420)
T d1vp4a_         243 GPERVVLLNTFSKVL-APGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRLAARYL  299 (420)
T ss_dssp             CTTTEEEEEESTTTT-CGGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             cccceeEEecccccc-ccccccccccccc--------hhhhhhhhhhhhccccCchhhhhhhhhhc
Confidence            667899999999995 7999999999854        588888777664 4577888998887744

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.1e-39  Score=289.48  Aligned_cols=218  Identities=21%  Similarity=0.343  Sum_probs=197.2

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI  126 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~  126 (319)
                      +|+|++|+|+    |++|+.+.+++.+.+..+.+ +|++..| +++|+++++++.+.+|.++++++|++|+|+++++..+
T Consensus         1 ~~~~~~~~~d----f~~p~~i~eal~~~~~~~~~-~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~   74 (361)
T d1d2fa_           1 LLPFTISDMD----FATAPCIIEALNQRLMHGVF-GYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL   74 (361)
T ss_dssp             CEECCSSSCS----SCCCHHHHHHHHHHHTTCCC-CCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred             CcCcCCCCCC----CCCCHHHHHHHHHHHhCCCC-CCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHH
Confidence            5899999987    89999999999998876654 7998877 7899999999999999999999999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCHHH
Q 020968          127 LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQH  204 (319)
Q Consensus       127 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~  204 (319)
                      +.+++++||+|++++|+|..|...++..|.+++.++.+. .+++.+|++.++..+. ++++++++++||||||.+++.++
T Consensus        75 ~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~  154 (361)
T d1d2fa_          75 IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDE  154 (361)
T ss_dssp             HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTH
T ss_pred             hhhccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhh
Confidence            999999999999999999999999999999999888765 4557799999998885 47789999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      +++|+++|++++++||+||+|.++.+++....++.... .++++++.|+||.++++|+|+||+++++
T Consensus       155 ~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~v~~~s~SK~~~~~g~R~g~~~~~~  220 (361)
T d1d2fa_         155 LEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA-RGDWALLTSGSKSFNIPALTGAYGIIEN  220 (361)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTC-CSSEEEEECSHHHHTCGGGCCEEEEECS
T ss_pred             hhhhhhhhhhhheeeeeccccccccccccccccccccc-ccccccccccccccccccccceeeecch
Confidence            99999999999999999999999999876666655544 3678999999999999999999998765

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=1.5e-39  Score=298.41  Aligned_cols=280  Identities=15%  Similarity=0.132  Sum_probs=224.2

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      .+...++++|+++.+.+++    ..++++|||++|.+ +.....+..+.++++..+.......+.|++..|.++||++++
T Consensus         6 ~~~~~p~d~i~~~~~~~~~----d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia   81 (401)
T d7aata_           6 HVEMGPPDPILGVTEAFKR----DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASA   81 (401)
T ss_dssp             TCCCCCCCHHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCCCCChHHHHHHHHhC----CCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Confidence            4567788999998877654    34778999999942 222335667999999888887766668999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEeCCH-----HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968           98 DYLNRDLPYKLSPDDVYLTLGC-----TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD  172 (319)
Q Consensus        98 ~~~~~~~g~~~~~~~i~~~~G~-----t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  172 (319)
                      +++.+.++..+.+++++.+.++     .+++..++++++++||+|++++|+|+.|...++..|++++.++..+++++..+
T Consensus        82 ~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~  161 (401)
T d7aata_          82 ELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLD  161 (401)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEEC
T ss_pred             HHHhccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEecccccccccc
Confidence            9999887777778888776543     35678888889999999999999999999999999999999999888888999


Q ss_pred             HHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc---cCCCCC
Q 020968          173 LDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV---FGSIVP  246 (319)
Q Consensus       173 ~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~~~  246 (319)
                      .+.+.+.+.   ++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.|++....+...   ....++
T Consensus       162 ~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~  241 (401)
T d7aata_         162 FTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID  241 (401)
T ss_dssp             HHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred             HHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcc
Confidence            998887763   46789999999999999999999999999999999999999999999997643322211   123456


Q ss_pred             eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH----hh-hhcCCcchHHHHHHHHHH
Q 020968          247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS----FL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++.|+||.++++|+|+||++++...     .+...++..    .. ....+++.+.|.+++..+
T Consensus       242 ~~~~~s~sk~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  302 (401)
T d7aata_         242 VVLSQSYAKNMGLYGERAGAFTVICRD-----AEEAKRVESQLKILIRPMYSNPPMNGARIASLIL  302 (401)
T ss_dssp             CEEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             cceeEeccccceeeccccceeecchHH-----HHHHHHHHHHHHHHhhccccccchHHHHHHHHhc
Confidence            899999999999999999999998643     112222221    11 234567888888888733

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-38  Score=287.64  Aligned_cols=264  Identities=26%  Similarity=0.390  Sum_probs=220.9

Q ss_pred             CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968           15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR   94 (319)
Q Consensus        15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~   94 (319)
                      |+|.|++.+..+-+..+ ..+.+      ..++|||+.|+|+    +++|+.+.+++++.+.+  ..+|++..|..+||+
T Consensus         2 ~~~~~~~~~~~~~~~~~-~~la~------~~~~I~ls~g~p~----~~~p~~i~~al~~~l~~--~~~Y~~~~G~~elr~   68 (368)
T d1v2da_           2 RLHPRTEAAKESIFPRM-SGLAQ------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALRE   68 (368)
T ss_dssp             CCCGGGGGC---CHHHH-HHHHH------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHH
T ss_pred             CCChhhhhcCCCHHHHH-HHHhc------cCCCEEecCCCCC----CCCCHHHHHHHHHHhhc--ccCCCCCcCCHHHHH
Confidence            56778887776444444 33332      2468999999987    78999999999998765  358999999999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCH
Q 020968           95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDL  173 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~  173 (319)
                      ++|+++      ++++++|++|+|+++++..++.+++++||.|+++.|+|..+...++..|.+++.++++. .+++.+|+
T Consensus        69 aiA~~~------~~~~~~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~  142 (368)
T d1v2da_          69 ALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDL  142 (368)
T ss_dssp             HHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCH
T ss_pred             HHHhhc------ccCCcceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCH
Confidence            999998      56899999999999999999999999999999999999999999999999999888753 35678999


Q ss_pred             HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecC
Q 020968          174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI  253 (319)
Q Consensus       174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~  253 (319)
                      +.+++.+.++++++++++||||||.+++.+++++|+++|+++|+++|+|++|..+.+....+..  .....++.+++.|+
T Consensus       143 ~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  220 (368)
T d1v2da_         143 SALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRL--REFAPERTFTVGSA  220 (368)
T ss_dssp             HHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCH--HHHCTTTEEEEEEH
T ss_pred             HHHHHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhccccccccc--ccccccccceeecc
Confidence            9999999999999999999999999999999999999999999999999999987765543222  22344578999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ||.++++|+|+||+++++        ++++.+..... ...+++.+.|.+++.++
T Consensus       221 sk~~~~~G~R~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  267 (368)
T d1v2da_         221 GKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEAL  267 (368)
T ss_dssp             HHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccc--------cccchhhhhhhcccccccccccccccccc
Confidence            999999999999999875        36777777665 35677889998888754

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=9.9e-38  Score=288.83  Aligned_cols=253  Identities=22%  Similarity=0.348  Sum_probs=202.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc-----------CCCCCCCCCcCCHHHHHHHHHHHhhhCC--CCCCC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-----------ARFNCYSSTVGILPARRAIADYLNRDLP--YKLSP  110 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~  110 (319)
                      +.++|+|+.++..     -..+.+.+.+.+....           .....|++..|.++||+++|+++++.+|  +.+++
T Consensus        35 p~G~i~l~~~en~-----l~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~p  109 (431)
T d1m7ya_          35 TNGIIQMGLAENQ-----LCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP  109 (431)
T ss_dssp             TTSBEECSSCCCC-----SCHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred             CCcEEEeeccccc-----ccHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCc
Confidence            3459999999854     2335555555432110           0123699999999999999999998876  45678


Q ss_pred             CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhc------cC
Q 020968          111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALAD------EN  183 (319)
Q Consensus       111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~~  183 (319)
                      ++|++|+|+++++..++.+++++||+|+++.|+|..+...+. ..|+++++++.+.+++|.+|++.+++.+.      .+
T Consensus       110 e~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~  189 (431)
T d1m7ya_         110 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR  189 (431)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred             ceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCc
Confidence            999999999999999999999999999999999998887776 45899999999888889999999987764      25


Q ss_pred             ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC----------CCCCeEEEecC
Q 020968          184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG----------SIVPVLTLGSI  253 (319)
Q Consensus       184 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~----------~~~~vi~~~s~  253 (319)
                      ++++++++||||||.+++.+++++|+++|++++++||+||+|+.+.|++..+.++..+.          ..+++++++|+
T Consensus       190 ~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~  269 (431)
T d1m7ya_         190 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL  269 (431)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEES
T ss_pred             ceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecC
Confidence            67899999999999999999999999999999999999999999999887665544322          23579999999


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK  309 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~  309 (319)
                      ||.|+++|+|+||+++++        +++............++...|.+++..+..
T Consensus       270 SK~~~~~G~RiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~a~l~~  317 (431)
T d1m7ya_         270 SKDLGLPGFRVGAIYSND--------DMVVAAATKMSSFGLVSSQTQHLLSAMLSD  317 (431)
T ss_dssp             SSSSCCGGGCEEEEEESC--------HHHHHHHHHHGGGSCCCHHHHHHHHHHHHC
T ss_pred             cccccCCCCccceeccch--------hhhHHHHHHHhccccccccccchhhhhhcc
Confidence            999999999999999865        344444444444445667777777765544

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=3.8e-37  Score=284.65  Aligned_cols=252  Identities=20%  Similarity=0.353  Sum_probs=203.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----------CCCCCCCCcCCHHHHHHHHHHHhhhCCC--CCCCC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----------RFNCYSSTVGILPARRAIADYLNRDLPY--KLSPD  111 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----------~~~~Y~~~~g~~~lr~~ia~~~~~~~g~--~~~~~  111 (319)
                      +.++|+|+.+++.     -..+.+.+.+.+.....          ...+|++..|.++||+++|+|+++.+|.  .++++
T Consensus        35 p~G~i~l~~aen~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e  109 (428)
T d1iaya_          35 PNGVIQMGLAENQ-----LCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE  109 (428)
T ss_dssp             TTSBEECSSCCCC-----SSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT
T ss_pred             CCceEEeecccCc-----cchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChh
Confidence            4569999999854     23455555554422111          1236999999999999999999998875  45788


Q ss_pred             cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhh------ccCc
Q 020968          112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALA------DENT  184 (319)
Q Consensus       112 ~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l------~~~~  184 (319)
                      +|++|+|+++++..++.+++++||+|+++.|+|..+...+. ..|+++++++.+..++|.+|.+.++.++      ..++
T Consensus       110 ~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  189 (428)
T d1iaya_         110 RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKV  189 (428)
T ss_dssp             SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCE
T ss_pred             hEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCc
Confidence            99999999999999999999999999999999999887666 4589999999988888999999887653      3467


Q ss_pred             eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc--------CCCCCeEEEecCccc
Q 020968          185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF--------GSIVPVLTLGSISKR  256 (319)
Q Consensus       185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--------~~~~~vi~~~s~sK~  256 (319)
                      +++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++.++.++.++        ...+++++++|+||.
T Consensus       190 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~  269 (428)
T d1iaya_         190 KGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD  269 (428)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTT
T ss_pred             eEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCc
Confidence            889999999999999999999999999999999999999999999988776665432        234679999999999


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      |+++|+|+||++++++       .+.+.++..... ...+...|.+++..+.
T Consensus       270 ~~~~GlRiG~~~~~~~-------~l~~~~~~~~~~-~~~~~~~~~~~~a~l~  313 (428)
T d1iaya_         270 MGLPGFRVGIIYSFND-------DVVNCARKMSSF-GLVSTQTQYFLAAMLS  313 (428)
T ss_dssp             SSCGGGCEEEEEESCH-------HHHHHHHHHHTT-SCCCHHHHHHHHHHTT
T ss_pred             ccCCCccccccccccc-------chhhhhhhhhcc-cccccccccchhhhhh
Confidence            9999999999998652       355655555443 4567777777766443

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-37  Score=285.31  Aligned_cols=282  Identities=15%  Similarity=0.094  Sum_probs=216.5

Q ss_pred             hcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCC-CCCCCCCcHHHHHHHHHHhhc-CCCCCCCCCcCCHHHHHHHHHH
Q 020968           22 TASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPS-AFPSFRTASVAVDAIVHSVRS-ARFNCYSSTVGILPARRAIADY   99 (319)
Q Consensus        22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~   99 (319)
                      ..+.+.|.++.+.++    +.+.++.|||++|.+. .....+.++.+++|....... .....|+|..|.++||++++++
T Consensus         7 ~~~~dpi~~~~~~~~----~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~   82 (397)
T d3tata_           7 AYAGDPILTLMERFK----EDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPL   82 (397)
T ss_dssp             CCCCCTTTTHHHHHH----HSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHh----cCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHH
Confidence            445667877776664    3456788999999421 112346678999987765433 2345799999999999999999


Q ss_pred             HhhhCCCCCCCCcEEEeCCHHHH----HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968          100 LNRDLPYKLSPDDVYLTLGCTQA----IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA  175 (319)
Q Consensus       100 ~~~~~g~~~~~~~i~~~~G~t~a----i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  175 (319)
                      +.+.++..++.++++++.|++++    +.+++..+.++||.|++++|+|..|...++..|.+++.++...++++..|.+.
T Consensus        83 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~  162 (397)
T d3tata_          83 LFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFND  162 (397)
T ss_dssp             HTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHH
T ss_pred             HhhccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccchHH
Confidence            99888877888999888776654    55666667899999999999999999999999999999999888888889888


Q ss_pred             HHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc--ccCCCCCeEEE
Q 020968          176 VEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG--VFGSIVPVLTL  250 (319)
Q Consensus       176 l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~~~~vi~~  250 (319)
                      +.+.+.   ++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.|++....+..  .....+++|++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~  242 (397)
T d3tata_         163 LLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVS  242 (397)
T ss_dssp             HHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEEC
T ss_pred             HHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEE
Confidence            877654   4667888999999999999999999999999999999999999999998754322211  12344678999


Q ss_pred             ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHHh
Q 020968          251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~  308 (319)
                      .|+||.|+++|+|+||++++...... .......+.... ....+++...|.+++..+.
T Consensus       243 ~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~  300 (397)
T d3tata_         243 NSFSKIFSLYGERVGGLSVMCEDAEA-AGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN  300 (397)
T ss_dssp             BCCHHHHTBTTTCCBCCEEECSSTTH-HHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHH
T ss_pred             ecCcccccccCccccccccchhHHHH-HHHHHHHHHHHhhcccccccHHHHHHHHHhcC
Confidence            99999999999999999988653111 111111122222 2355678889988877443

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.1e-37  Score=280.04  Aligned_cols=280  Identities=18%  Similarity=0.128  Sum_probs=202.6

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      ++...+++.|+++.+.+++    ..+++.|||++|.+ +.....+.++.+++|+.+.......++|++..|.++||++++
T Consensus         4 ~~~~~p~d~i~~~~~~~~~----d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia   79 (396)
T d2q7wa1           4 NITAAPADPILGLADLFRA----DERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ   79 (396)
T ss_dssp             TCCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHH
T ss_pred             ccccCCCChHHHHHHHHhc----cCCCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHH
Confidence            3456777888888766643    34677899999932 112335677999999988877766668999999999999999


Q ss_pred             HHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHH--hcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968           98 DYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTV--LARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL  173 (319)
Q Consensus        98 ~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~--l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  173 (319)
                      +++.+.++.....+.+  +++.|++.++.+++..  ..++||.|++++|+|+.|...++..|.+++.++...++++..+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~  159 (396)
T d2q7wa1          80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF  159 (396)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred             HHHHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEeccccccccccccc
Confidence            9998877665555544  4567776666555543  46899999999999999999999999999999998888877787


Q ss_pred             HHHHhhh---ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc--cCCCCCeE
Q 020968          174 DAVEALA---DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV--FGSIVPVL  248 (319)
Q Consensus       174 ~~l~~~l---~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~~~~vi  248 (319)
                      ..+++..   .++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++........  ....++++
T Consensus       160 ~~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~  239 (396)
T d2q7wa1         160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELI  239 (396)
T ss_dssp             HHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEE
T ss_pred             chHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhccccc
Confidence            7776654   346778899999999999999999999999999999999999999999987643332211  12345789


Q ss_pred             EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH-----hhhhcCCcchHHHHHHHHHH
Q 020968          249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-----FLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++.|+||.|+++|+|+||++++...     .+...+.+.     ......+++...|.+++.++
T Consensus       240 ~~~s~sk~~~~~G~R~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~  298 (396)
T d2q7wa1         240 VASSYSKNFGLYNERVGACTLVAAD-----SETVDRAFSQMKAAIRANYSNPPAHGASVVATIL  298 (396)
T ss_dssp             EEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred             ccccccccccccCCCccccccchhH-----HHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHh
Confidence            9999999999999999999998643     112222221     12234567778888777633

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=3.3e-36  Score=276.91  Aligned_cols=282  Identities=15%  Similarity=0.136  Sum_probs=215.3

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCC---CCCCCCCCCCcHHHHHHHHHHhhc-CCCCCCCCCcCCHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHG---DPSAFPSFRTASVAVDAIVHSVRS-ARFNCYSSTVGILPARR   94 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~g~~~lr~   94 (319)
                      +++..+++.|+++.+.++    +.++++.|||++|   +++  ...+.++.++++.+..... ...++|+|..|.++||+
T Consensus         7 ~~~~~~~d~i~~~~~~~~----~d~~~~kInL~iG~~~d~~--g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~   80 (412)
T d1yaaa_           7 NIELLPPDALFGIKQRYG----QDQRATKVDLGIGAYRDDN--GKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTS   80 (412)
T ss_dssp             TCCCCCCCTTHHHHHHHH----TCCCSSCEECSSCCCBCTT--SCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred             cCCcCCCChHHHHHHHHh----cCCCCCcEEeecCCCcCCC--CCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHH
Confidence            578889999988876664    4457789999999   343  2345668888886654433 33457999999999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEEE--eCCHHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968           95 AIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVIL--TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE  170 (319)
Q Consensus        95 ~ia~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  170 (319)
                      ++++++.+..+.....+.++.  +.|+..++..++  ..+..+||.|++++|+|..|...++..|.+++.++...++++.
T Consensus        81 aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~  160 (412)
T d1yaaa_          81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS  160 (412)
T ss_dssp             HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred             HHHHHHhcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceeccccccccccc
Confidence            999999886665444554443  344555554443  3456799999999999999999999999999999998888888


Q ss_pred             CCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCC------ccc
Q 020968          171 VDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM------GVF  241 (319)
Q Consensus       171 ~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~------~~~  241 (319)
                      .+.+.++..+.   +.++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....+.      ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  240 (412)
T d1yaaa_         161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL  240 (412)
T ss_dssp             ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred             ccchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhcc
Confidence            99988887764   355688899999999999999999999999999999999999999999976443322      123


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH----Hh-hhhcCCcchHHHHHHHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK----SF-LNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~q~~~~~~l  307 (319)
                      ...+++|++.|+||.|+++|+|+||++++++.... ..+....+.    .. +....+++.+.|.+++.++
T Consensus       241 ~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l  310 (412)
T d1yaaa_         241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQ-NKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLL  310 (412)
T ss_dssp             TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTT-HHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred             ccCCCeEEEEecCCccccCcCceEEEEEchhhhhh-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHh
Confidence            45578999999999999999999999998754221 111222211    12 2345678999999988844

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=1.8e-36  Score=278.73  Aligned_cols=285  Identities=15%  Similarity=0.105  Sum_probs=212.7

Q ss_pred             CCCCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCC---CCCCCCCCCCcHHHHHHHHHHhhcC-CCCC
Q 020968            7 ANGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHG---DPSAFPSFRTASVAVDAIVHSVRSA-RFNC   82 (319)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~   82 (319)
                      +|++-|..     +...+++.|..+.++++    +.+++++|||++|   +++  ...+.++.+.++.+...... ..++
T Consensus         1 ~~~s~~~~-----~~~~~~~~i~~l~~~~~----~d~~~~~Inl~iG~~~d~~--g~~~~~~~V~~a~~~~~~~~~~~~~   69 (412)
T d1ajsa_           1 APPSVFAE-----VPQAQPVLVFKLIADFR----EDPDPRKVNLGVGAYRTDD--CQPWVLPVVRKVEQRIANNSSLNHE   69 (412)
T ss_dssp             CCCCTTTT-----CCCCCCCHHHHHHHHHH----TCCCTTCEECCSCCCCCTT--SCCCCCHHHHHHHHHHHTCTTCCCC
T ss_pred             CCcChhhh-----CCcCCCChHHHHHHHHh----cCCCCCcEEeeCCCCcCCC--CCCCCcHHHHHHHHHHHhCCCcCCC
Confidence            35555543     56677788888777664    4457889999999   333  33566788888877654443 3457


Q ss_pred             CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEE--EeCCHHHHHHHHHHHh-------cCCCCEEEEcCCCCcchHHHHhh
Q 020968           83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVY--LTLGCTQAIEVILTVL-------ARPGANILLPRPGFPYYEARATH  153 (319)
Q Consensus        83 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~--~~~G~t~ai~~~~~~l-------~~~gd~Vl~~~p~~~~~~~~~~~  153 (319)
                      |+|..|.++||+++++++.+.++..++.++++  .|.|++.++..+...+       .++||+|++++|+|..|...++.
T Consensus        70 Y~p~~G~p~lreaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~  149 (412)
T d1ajsa_          70 YLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTT  149 (412)
T ss_dssp             CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHH
Confidence            99999999999999999988777666666654  4566666655554443       68999999999999999999999


Q ss_pred             CCCeEEEEe-ccCCCCCcCCHHHHHhhh---ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968          154 SHLEVRHFD-LLPAKGWEVDLDAVEALA---DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA  229 (319)
Q Consensus       154 ~g~~~~~~~-~~~~~~~~~d~~~l~~~l---~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~  229 (319)
                      .|.+.+.++ ..+.+.+..|.+.+++.+   .++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.
T Consensus       150 ~G~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~  229 (412)
T d1ajsa_         150 AGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFA  229 (412)
T ss_dssp             TTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTT
T ss_pred             cCCeEEEeecccccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhh
Confidence            999866544 444566778888877654   4567888999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC---cccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHH----HHhh-hhcCCcchHHHH
Q 020968          230 FGNTPFVPM---GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI----KSFL-NISSDPATFIQF  301 (319)
Q Consensus       230 ~~~~~~~~~---~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~q~  301 (319)
                      +++......   ......++++++.|+||.++++|+|+||++++.+.     .+...++    .... .....++.+.|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (412)
T d1ajsa_         230 SGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKE-----PDSILRVLSQMQKIVRVTWSNPPAQGAR  304 (412)
T ss_dssp             TSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHH
T ss_pred             cCCcccchhhhhhhhhhcccccccccccccccCCCCCccccccchhH-----HHHHHHHHHHHHHHhhccccccchHHHH
Confidence            876432221   11234467899999999999999999999997643     1122222    2222 235567888888


Q ss_pred             HHHHHH
Q 020968          302 LKSSRK  307 (319)
Q Consensus       302 ~~~~~l  307 (319)
                      +++.++
T Consensus       305 ~~~~~~  310 (412)
T d1ajsa_         305 IVARTL  310 (412)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            888744

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=8.2e-36  Score=272.72  Aligned_cols=279  Identities=17%  Similarity=0.153  Sum_probs=210.5

Q ss_pred             HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968           19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA   97 (319)
Q Consensus        19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   97 (319)
                      .++..++++|+++...+++    ...++.|||++|.+ +.....+.++.+.+|+++.++....++|+|..|.++||++++
T Consensus         4 ~~~~~~~d~i~~l~~~~~~----d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia   79 (394)
T d2ay1a_           4 NLKPQAPDKILALMGEFRA----DPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMG   79 (394)
T ss_dssp             GCCCCCCCSHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHhC----CCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Confidence            3456677889888776653    45778999999942 122345777999999998887766668999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEeCCH-HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968           98 DYLNRDLPYKLSPDDVYLTLGC-TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV  176 (319)
Q Consensus        98 ~~~~~~~g~~~~~~~i~~~~G~-t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  176 (319)
                      +++.+..+.....+.+++++|+ ..++.+.+..+.++||.|++++|+|..|...++..|.+++.++...+.++..+.+.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  159 (394)
T d2ay1a_          80 ELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGM  159 (394)
T ss_dssp             HHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHH
T ss_pred             HHHhccccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhH
Confidence            9998765544334344444332 344566666677999999999999999999999999999999988777777777777


Q ss_pred             Hhhh---ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc--CCCCCeEEEe
Q 020968          177 EALA---DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF--GSIVPVLTLG  251 (319)
Q Consensus       177 ~~~l---~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~~~vi~~~  251 (319)
                      ++..   .++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.|++....+....  ....+++++.
T Consensus       160 ~~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~  239 (394)
T d2ay1a_         160 KADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAA  239 (394)
T ss_dssp             HHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEE
T ss_pred             HHHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcccccccc
Confidence            6654   3456778889999999999999999999999999999999999999999876443322221  2335689999


Q ss_pred             cCccccCCCcceeeEEEeeCCCCCccchHHHHHHH----Hhh-hhcCCcchHHHHHHHHH
Q 020968          252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK----SFL-NISSDPATFIQFLKSSR  306 (319)
Q Consensus       252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~q~~~~~~  306 (319)
                      |+||.++++|+|+||++++...     .+...+..    ... .....++...|.++...
T Consensus       240 s~sk~~~~~G~R~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (394)
T d2ay1a_         240 SCSKNFGIYRERTGCLLALCAD-----AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTV  294 (394)
T ss_dssp             ECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHH
T ss_pred             cccccccCCcccccchhhchhH-----HHHHHHhhhhhHhhhcccccchhHHHHHHHHHh
Confidence            9999999999999999998643     11122111    111 23456677788777663

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=2.7e-34  Score=258.98  Aligned_cols=239  Identities=22%  Similarity=0.333  Sum_probs=194.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI  123 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai  123 (319)
                      +.++|+|+.|.+.    +++++.+++++.+....  ...|+ +.+..+||+++|+++      ++++++|++++|+++++
T Consensus        21 p~~~idls~~~np----~~~p~~~~~a~~~~~~~--~~~Yp-~~~~~~Lr~aia~~~------~v~~~~I~~~~g~~~~~   87 (355)
T d1lc5a_          21 PDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYP-DADYFHLHQALARHH------QVPASWILAGNGETESI   87 (355)
T ss_dssp             GGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCC-CTTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             hhheEEccCCCCC----CCCCHHHHHHHHHHHHH--hccCC-CCChHHHHHHHHHHh------CCCHHHEEecccHHHHH
Confidence            4479999999654    57889999999987654  45785 457799999999999      56889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968          124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ  203 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  203 (319)
                      ..++..+.  |+.+++..|.|..|.......+.++..+++..++++.++ +.+++.+.++++++++++||||||.+++.+
T Consensus        88 ~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~l~nP~NPtG~~~~~e  164 (355)
T d1lc5a_          88 FTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERP  164 (355)
T ss_dssp             HHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccccccceeeeecccCcccccchhh
Confidence            98887764  556667789999999999999999999998877777766 456666777899999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968          204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD  283 (319)
Q Consensus       204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  283 (319)
                      ++++|+++|+++++++|+||+|.++.+.+.....  .....+++++++|+||.|++||+|+||++++++       .+.+
T Consensus       165 ~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~-------~~~~  235 (355)
T d1lc5a_         165 LLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD-------AAMA  235 (355)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGG--GCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH-------HHHH
T ss_pred             hhhhhhhhccccccccccccceeeeeeecccccc--cccccccceeecccccccccccccccceeccch-------hhhH
Confidence            9999999999999999999999998876544322  234557899999999999999999999998752       2445


Q ss_pred             HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968          284 SIKSFLNISSDPATFIQFLKSSRKL  308 (319)
Q Consensus       284 ~~~~~~~~~~~~~~~~q~~~~~~l~  308 (319)
                      .++.... ....+.++|.++..++.
T Consensus       236 ~~~~~~~-~~~~~~~~~~~a~~~l~  259 (355)
T d1lc5a_         236 RMRRQQM-PWSVNALAALAGEVALQ  259 (355)
T ss_dssp             HHHHHSC-TTCSCHHHHHHHHHGGG
T ss_pred             HHHhhcC-Ccccccccccccccccc
Confidence            5554333 35678888888877443

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.4e-32  Score=245.75  Aligned_cols=235  Identities=19%  Similarity=0.255  Sum_probs=186.8

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      ..+.++|.|+.|++.    +++|+.+.+++.+.+....+..| |..|.++||+++++++++.   .+++++|++|+|+++
T Consensus        16 ~~~~d~~~l~~~enp----~~~p~~i~~~~~~~~~~~~~~~y-p~~g~~~Lr~aia~~~~~~---~v~~d~I~it~G~~~   87 (334)
T d2f8ja1          16 TEKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYLDTD---FLSKNNVSVGNGADE   87 (334)
T ss_dssp             CCCCCSEECSSCCCS----SCCCHHHHHHHHHHCCTTGGGSC-CCSSCHHHHHHHHHHHTCS---SCCGGGEEEEEHHHH
T ss_pred             ccCCCceEEECCCCC----CCCCHHHHHHHHHHhhcchhcCC-CCCCcHHHHHHHHHHhccc---CCCcceEEecCcchh
Confidence            356799999999865    68899999999998877665445 6679999999999999653   368899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccC
Q 020968          122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  201 (319)
                      ++.++++.    ||+|++++|+|..|...++..|++++.++.+++..  .+     +...++++++++++|+||||.+++
T Consensus        88 ~l~~l~~~----~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~--~~-----~~~~~~~~~l~l~nP~NPtG~~~s  156 (334)
T d2f8ja1          88 IIYVMMLM----FDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLR--IP-----EVNVGEGDVVFIPNPNNPTGHVFE  156 (334)
T ss_dssp             HHHHHHHH----SSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSC--CC-----CCCCCTTEEEEEESSCTTTCCCCC
T ss_pred             HHHHHhhh----ccccccccccccccccchhccCCcccccccccccc--cc-----ccccccceEEEecccccccceeec
Confidence            99887654    69999999999999999999999999999865322  21     223457889999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      .+++.++    .++++++|+||+|.++.+...    .......+++++++|+||+++++|+|+||++++.        ++
T Consensus       157 ~~~l~~~----~~~~~~ii~Dd~~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~--------~~  220 (334)
T d2f8ja1         157 REEIERI----LKTGAFVALDEAYYEFHGESY----VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KF  220 (334)
T ss_dssp             HHHHHHH----HTTTCEEEEECTTGGGTCCCC----GGGGGTCSSEEEEEESTTTSSCTTTCEEEEEECH--------HH
T ss_pred             HHHhhcc----ccceeEEeecccchhhccccc----ccccccCceEEEEecCccccchhhhhhhhcccch--------HH
Confidence            7766553    457999999999988654332    2223445789999999999999999999999863        58


Q ss_pred             HHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968          282 VDSIKSFLNISSDPATFIQFLKSSRKLKRNSF  313 (319)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  313 (319)
                      +.+++..+.. ...+.+.|.++.. .+++.++
T Consensus       221 i~~l~~~~~~-~~~s~~~~~~a~~-~l~~~~~  250 (334)
T d2f8ja1         221 IDAYNRVRLP-FNVSYVSQMFAKV-ALDHREI  250 (334)
T ss_dssp             HHHHHHHSCT-TCSCHHHHHHHHH-HHHTHHH
T ss_pred             HHHHHHhhcc-cccchhhhhhccc-ccccccc
Confidence            8888777654 4578889987776 4443333

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-32  Score=245.34  Aligned_cols=230  Identities=19%  Similarity=0.325  Sum_probs=184.9

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..+.|.|+.++..    +++++.+        ....+++|+. .+..+||+++|+++      ++++++|++|+|++++
T Consensus        25 ~~~~~i~L~~ne~p----~~~~~~~--------~~~~l~rYPd-~~~~~Lr~~ia~~~------gv~pe~I~it~Gs~ea   85 (354)
T d1fg7a_          25 GGNGDVWLNANEYP----TAVEFQL--------TQQTLNRYPE-CQPKAVIENYAQYA------GVKPEQVLVSRGADEG   85 (354)
T ss_dssp             TTTCSEECSSCCCS----SCCCCCC--------CCCCTTSCCC-SSCHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCCEEeeCCCCC----CCCCHHH--------HHHHHhcCCC-CcHHHHHHHHHHHh------CCChHHeeeccCchHH
Confidence            35678999998643    2333322        2234567864 46789999999999      5789999999999999


Q ss_pred             HHHHHHHhcCCCC-EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccC
Q 020968          123 IEVILTVLARPGA-NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT  201 (319)
Q Consensus       123 i~~~~~~l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  201 (319)
                      |..++++++++|| .|+++.|+|..|...++..|.+++.++..  ++|.+|+++++..+. +++++++++||||||.+++
T Consensus        86 i~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~--~~~~~d~~~l~~~~~-~~~~v~~~~pnNPtG~~~~  162 (354)
T d1fg7a_          86 IELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLIN  162 (354)
T ss_dssp             HHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHhhccccccccccccccccchhhhhccCceeeccccc--cccccchhhhhhccc-ccceeeccCCCccceeEee
Confidence            9999999999998 58899999999999999999999887764  578999999998774 6899999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968          202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI  281 (319)
Q Consensus       202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  281 (319)
                      .++++.+.+.++ ++.++|+||+|.++.++...   .......+++++++||||.|+++|+|+||++++.        ++
T Consensus       163 ~~~~~~~~~~~~-~~~~~iidd~~~~f~~~~~~---~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~~--------~~  230 (354)
T d1fg7a_         163 PQDFRTLLELTR-GKAIVVADEAYIEFCPQASL---AGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EV  230 (354)
T ss_dssp             HHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCS---GGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HH
T ss_pred             eccccccccccc-ccccccccccchhhcccccc---chhhcccccceEEeCCccccCCCccccccccccc--------hh
Confidence            999998888776 57888899999888754422   2233456789999999999999999999999853        68


Q ss_pred             HHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968          282 VDSIKSFLNISSDPATFIQFLKSSRK  307 (319)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~q~~~~~~l  307 (319)
                      ++++.+.... ...+.+.|.+++.++
T Consensus       231 i~~l~~~~~~-~~~~~~~~~~a~~~~  255 (354)
T d1fg7a_         231 INLLMKVIAP-YPLSTPVADIAAQAL  255 (354)
T ss_dssp             HHHHHHHSCS-SCSCHHHHHHHHHHT
T ss_pred             hhhhhhhcCc-cchhhHHHHHHHHHH
Confidence            8888776664 345667776666543

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.96  E-value=1.3e-29  Score=231.96  Aligned_cols=227  Identities=15%  Similarity=0.151  Sum_probs=172.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHH-HHHHh--hcCCCCCCCCCc----CCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDA-IVHSV--RSARFNCYSSTV----GILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a-~~~~~--~~~~~~~Y~~~~----g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      ++-++++++|||..+     .+-+++. -..++  .....+.|..+.    -.++|+++|+++.....|...+..+|+++
T Consensus        55 ~~~~~~~~~gdp~~~-----~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG  129 (425)
T d2hoxa1          55 QGCSADVASGDGLFL-----EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFG  129 (425)
T ss_dssp             TTCCEECCSCCCGGG-----HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEE
T ss_pred             CCceeeCCCCCCCCC-----CHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEEC
Confidence            455899999998732     2323222 22222  111233454432    23899999999998877777777789999


Q ss_pred             CCHHHHHHHHHHHh--------cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968          117 LGCTQAIEVILTVL--------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       117 ~G~t~ai~~~~~~l--------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      +|++++|++++++|        .++||+|+++.|+|+.|...++..+.+...        |.+|.+.+++.+++++++++
T Consensus       130 ~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~--------~~~D~~~~~~~~~~~~~ii~  201 (425)
T d2hoxa1         130 VGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEM  201 (425)
T ss_dssp             SHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEE
T ss_pred             CCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCc--------cCCCHHHHHhhCCCCceEEE
Confidence            99999999999999        468999999999999999999988875443        44577788888888899999


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +++||||||.+..          +..+++.+|.||+|.+..|.     ++.  ...+++|+++|+||.|+++|+|+||++
T Consensus       202 l~sPnNPtG~l~~----------~v~~~~~~I~DEaY~~~~f~-----~~~--~~~~~~Ivl~S~SK~fglaGlRiGw~i  264 (425)
T d2hoxa1         202 VTSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHYT-----PIK--YKADEDILLFTMSKFTGHSGSRFGWAL  264 (425)
T ss_dssp             EESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTTS-----CCC--SCBCCSEEEEEHHHHTSCGGGCCEEEE
T ss_pred             EECCCCCCcchhh----------hhhhCCEEEEeccccCcccc-----chh--hhcCCeEEEEeCHHhccCcchheeeEE
Confidence            9999999998732          23458999999999764432     222  234678999999999999999999998


Q ss_pred             eeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968          269 TSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK  307 (319)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l  307 (319)
                      ++++       .+.+++..+... ..+++.++|.++..++
T Consensus       265 ~~~~-------~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL  297 (425)
T d2hoxa1         265 IKDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVL  297 (425)
T ss_dssp             ECCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred             eCCH-------HHHHHHHHhhccCcccCCHHHHHHHHHHh
Confidence            8763       477888877764 6788999999887755

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.91  E-value=3.2e-24  Score=192.69  Aligned_cols=192  Identities=15%  Similarity=0.167  Sum_probs=147.4

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCC---------CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC
Q 020968           62 RTASVAVDAIVHSVRSARFNCYS---------STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR  132 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~---------~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~  132 (319)
                      .++++.++++.+.-+......|.         ..+-.+.+++.+|+++        +.+++++|+|+++|+.+++.++++
T Consensus        13 ~l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~--------g~e~~~~t~g~t~a~~~~~~al~~   84 (364)
T d2e7ja1          13 KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL--------GCDVARVTNGAREAKFAVMHSLAK   84 (364)
T ss_dssp             CCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT--------TSSEEEEESSHHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHh--------CcCEEEEECcHHHHHHHHHHHHhC
Confidence            35678888887643221111111         1112456788888887        457899999999999999999999


Q ss_pred             CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-----CceEEEEcCCCCccccccCHHHHHH
Q 020968          133 PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----NTVALVIINPGNPCGNVYTYQHLQK  207 (319)
Q Consensus       133 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~l~~p~nptG~~~~~~~l~~  207 (319)
                      +||.|+++.++|.+....++..|+++..++.+...++.+|++++++.+++     ++++|++++|+||||.+.+   +++
T Consensus        85 ~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~  161 (364)
T d2e7ja1          85 KDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKK  161 (364)
T ss_dssp             TTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHH
T ss_pred             CCcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chh
Confidence            99999999999988888889999999999987777789999999998854     3467889999999999966   889


Q ss_pred             HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      |+++|+++|+++++|++|+....    +..+..+..   .++++|++|+++.+| ++||++++++
T Consensus       162 I~~ia~~~~i~livD~a~~~g~~----~~~~~~~g~---D~~~~S~~K~~~~~g-~~g~l~~~~~  218 (364)
T d2e7ja1         162 IAKVCSEYDVPLLVNGAYAIGRM----PVSLKEIGA---DFIVGSGHKSMAASG-PIGVMGMKEE  218 (364)
T ss_dssp             HHHHHHTTTCCEEEECTTTBTTB----CCCHHHHTC---SEEEEEHHHHSSCCS-SCEEEEECTT
T ss_pred             heeccccccchhhccccchhhhh----hhccccccc---ceeeeccccccCCCC-CEEEEEECHH
Confidence            99999999999999999975321    222222322   388999999998777 7999998653

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.91  E-value=6.7e-24  Score=191.23  Aligned_cols=225  Identities=16%  Similarity=0.057  Sum_probs=167.7

Q ss_pred             cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      .+.+.++++.....+    ++..+...+.+..        .+++..+.+++++..++.+..     ...+++++++|+++
T Consensus        17 ~g~~~i~~~~gl~~~----~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~-----~~~e~~~~~~~~~~   79 (366)
T d2aeua1          17 KGRDALYDLSGLSGG----FLIDEKDKALLNT--------YIGSSYFAEKVNEYGLKHLGG-----DENDKCVGFNRTSS   79 (366)
T ss_dssp             TCGGGCEECSSCCCC----CCCCHHHHHHHTS--------TTHHHHHHHHHHHHHHHHHTC-----CTTEEEEEESSHHH
T ss_pred             hccchHhhhccCCCC----CCccHHHHHHHHH--------hcCchhhHHHHHHHHHHHccC-----CCccEEEEeCCHHH
Confidence            345668888766644    5666666555422        233444567888888888742     24578999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEc-CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968          122 AIEVILTVLARPGANILLP-RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       122 ai~~~~~~l~~~gd~Vl~~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  200 (319)
                      |+..++.++.++++.|+++ .|+|..+...++..|++++  +.       -|++++++++++++++|++++|+||+  ++
T Consensus        80 a~~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v--~~-------~d~e~l~~~i~~~tk~i~~~~p~n~~--~~  148 (366)
T d2aeua1          80 AILATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYF--ES-------DKVGEILNKIDKDTLVIITGSTMDLK--VI  148 (366)
T ss_dssp             HHHHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEE--EE-------SCHHHHHTTCCTTEEEEEECBCTTSC--BC
T ss_pred             HHHHHHHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEE--CC-------CCHHHHHHhcCCCceEEEEEecCCCC--cC
Confidence            9999999987555545554 5899999999999998754  32       18999999999999999999999885  35


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG  280 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~  280 (319)
                      +.+++++|+++|+++|+++++|++|+...++...........   ..+++.|+||.  ++|+|+||++++.        +
T Consensus       149 ~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~---~di~~~S~sK~--~~g~~~G~i~~~~--------~  215 (366)
T d2aeua1         149 ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKL--MEGPRGGLLAGKK--------E  215 (366)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSS--SSSCSCEEEEEEH--------H
T ss_pred             CHHHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcC---ceEEEeccccc--ccccceeEEEecH--------H
Confidence            668999999999999999999999997766433222222222   23889999997  5689999999964        6


Q ss_pred             HHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968          281 IVDSIKSFLN-ISSDPATFIQFLKSSRK  307 (319)
Q Consensus       281 ~~~~~~~~~~-~~~~~~~~~q~~~~~~l  307 (319)
                      ++++++.... ....++++.|+++...+
T Consensus       216 ~i~~~~~~~~~~g~~~~~~~~~a~~~aL  243 (366)
T d2aeua1         216 LVDKIYIEGTKFGLEAQPPLLAGIYRAL  243 (366)
T ss_dssp             HHHHHHHHHHTTTCBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccccCCHHHHHHHHHHH
Confidence            8888887765 35567888888776543

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=6.4e-21  Score=172.90  Aligned_cols=197  Identities=18%  Similarity=0.190  Sum_probs=153.1

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC-CC-cC----------CHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-ST-VG----------ILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~~-~g----------~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      |.|+.+.-+     ++++.+.+++.+.+....  .|+ |. ..          ++++|+.+|+++      ++++++|++
T Consensus         4 iYlD~aa~~-----p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~l------g~~~~~I~~   70 (391)
T d1p3wa_           4 IYLDYSATT-----PVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPREIVF   70 (391)
T ss_dssp             EECBTTTCC-----CCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred             EEeeCcccc-----CCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence            567766533     788999999998876543  232 21 11          346788889888      568899999


Q ss_pred             eCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968          116 TLGCTQAIEVILTVL----ARPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV  188 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~  188 (319)
                      |+|+|++++.++.++    .++||+|++.++.|+.+...+   +..|+++..++.+.  .+.+|++.+++++++++++|+
T Consensus        71 ~~~~t~~l~~~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~~~~~i~~~T~lv~  148 (391)
T d1p3wa_          71 TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVS  148 (391)
T ss_dssp             ESSHHHHHHHHHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEE
T ss_pred             ECCHHHHHHHHHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCC--CCeEcHHHHHHhCCCCcEEEE
Confidence            999999999998875    379999999999998865443   45699999998753  346899999999999999999


Q ss_pred             EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      +++++||||.+++   +++|+++|+++|+++++|.++....    .+..+.....   .+++.|.+|++|.+|.  |++.
T Consensus       149 is~~~n~tG~~~~---~~~I~~~~~~~~~~~ivD~~~~~g~----~~~d~~~~~~---D~~~~s~~k~~g~~g~--g~~~  216 (391)
T d1p3wa_         149 IMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQLKV---DLMSFSGHKIYGPKGI--GALY  216 (391)
T ss_dssp             CCSBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTBTT----BCCCTTTSCC---SEEEEESTTTTSCSSC--EEEE
T ss_pred             EECCCCCCeeECC---HHHHHHHhccCCcEEEEeeccccCC----ccccchhccc---cccccccccccCCCce--EEEE
Confidence            9999999999988   7789999999999999999998632    2233333332   3888899999877774  6655


Q ss_pred             eeC
Q 020968          269 TSD  271 (319)
Q Consensus       269 ~~~  271 (319)
                      +..
T Consensus       217 ~~~  219 (391)
T d1p3wa_         217 VRR  219 (391)
T ss_dssp             ECB
T ss_pred             Eec
Confidence            543

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.81  E-value=6.3e-19  Score=158.95  Aligned_cols=203  Identities=17%  Similarity=0.131  Sum_probs=147.1

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC---CCCCCCCC----cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA---RFNCYSST----VGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      +.+.|+.+..+     ++|..+.+++.+.++..   ....+...    .-..++|+.+|+++      ++++++|++|+|
T Consensus         7 ~~~yld~~~~~-----~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~i~~~~g   75 (381)
T d1elua_           7 NKTYFNFGGQG-----ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITDN   75 (381)
T ss_dssp             TSEECCTTTCC-----CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEESS
T ss_pred             CCEEeeCCccc-----CCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHh------CCCcccEEEECC
Confidence            45778888754     66777888887766431   11111111    12456777788777      457889999999


Q ss_pred             HHHHHHHHHHHh-cCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968          119 CTQAIEVILTVL-ARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG  193 (319)
Q Consensus       119 ~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  193 (319)
                      +|++++.++.++ .++||+|+++++.|++..    ..++..|+++..++.........+.+.+++.++++++++++++++
T Consensus        76 ~t~a~~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~  155 (381)
T d1elua_          76 VTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLL  155 (381)
T ss_dssp             HHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBC
T ss_pred             hHHHhhhcchhhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhccccccccccccc
Confidence            999999999998 579999999999997643    455667999999987654433334677788888899999999999


Q ss_pred             CccccccCHHHHHHHHHHHHH----cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          194 NPCGNVYTYQHLQKIAETAKK----LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~----~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      ||||.+++   +++|.++|++    +++++++|.+++.    +..+..+....   ..+++.|++|+++.| .++|++.+
T Consensus       156 n~tG~~~~---~~~I~~l~~~~~~~~~~~~~vD~~~~~----g~~~~~~~~~~---~D~~~~s~~K~~~~p-~G~g~l~~  224 (381)
T d1elua_         156 WNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSA----GSLPLDFSRLE---VDYYAFTGHKWFAGP-AGVGGLYI  224 (381)
T ss_dssp             TTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTB----TTBCCCTTTSC---CSEEEEESSSTTCCC-TTCEEEEE
T ss_pred             ccccccch---hhHHHHHHhhccccccccccccccccc----ccccccccccc---ccccccccccccccc-chhhHHHh
Confidence            99999988   5667777766    4699999999876    22233333333   348999999997654 35677765


Q ss_pred             e
Q 020968          270 S  270 (319)
Q Consensus       270 ~  270 (319)
                      .
T Consensus       225 ~  225 (381)
T d1elua_         225 H  225 (381)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.7e-17  Score=149.52  Aligned_cols=213  Identities=14%  Similarity=0.148  Sum_probs=165.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..+++|+..+   |..+...|.+++++.+++++...      .-++....+.+|++.+|+++        ..+..++++
T Consensus        37 g~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~--------g~e~al~~~  105 (383)
T d1bs0a_          37 DRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL--------GYSRALLFI  105 (383)
T ss_dssp             TEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhc--------CCCceEEec
Confidence            45688999887   34466789999999998875321      12333445689999999998        567899999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCCC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGN  194 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~n  194 (319)
                      +++.++..++.++..++|.|++....|......++..+.+++.++.       .|.+++++.+.   ++.++|++..+.+
T Consensus       106 SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~h-------nd~~~le~~l~~~~~~~~~vv~e~v~s  178 (383)
T d1bs0a_         106 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  178 (383)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             ccchhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecc-------hHHHHHHHHhcccCCCceEEEecCCCC
Confidence            9999999999999999999999999999988888889988887764       48888888764   3456788889999


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG  274 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~  274 (319)
                      .+|.+.+   ++++.++|++||+++++||+|+....+.........+. ....+++.+++|.++.+|   |++++..   
T Consensus       179 ~~G~i~p---l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~-~~~~~~~~t~~ka~g~~G---g~v~~~~---  248 (383)
T d1bs0a_         179 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFGVSG---AAVLCSS---  248 (383)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTSSCC---EEEEECH---
T ss_pred             CCCcccc---hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcC-Cccccccccccccccccc---cccccch---
Confidence            9999977   78888899999999999999998877543322222222 234477889999998888   8888753   


Q ss_pred             CccchHHHHHHHHhh
Q 020968          275 ILQDSGIVDSIKSFL  289 (319)
Q Consensus       275 ~~~~~~~~~~~~~~~  289 (319)
                           +.++.++...
T Consensus       249 -----~~~~~l~~~~  258 (383)
T d1bs0a_         249 -----TVADYLLQFA  258 (383)
T ss_dssp             -----HHHHHHHHHC
T ss_pred             -----hHHHHHHhhc
Confidence                 4667676553

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=3.3e-18  Score=155.62  Aligned_cols=203  Identities=21%  Similarity=0.225  Sum_probs=156.5

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC-CC-C------cCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY-SS-T------VGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y-~~-~------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      +.+++.|+.+.-+     +.|+.+.+++.+.+.....+.. +. .      .-+++.|+.++++++.     .+++++++
T Consensus        20 ~~~~iYld~a~~~-----~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~-----~~~~~i~~   89 (405)
T d1jf9a_          20 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINA-----RSAEELVF   89 (405)
T ss_dssp             TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTC-----SCGGGEEE
T ss_pred             CCCeEEEeCcccc-----CCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCC-----CCcccccc
Confidence            4567899888754     7789999999988765322111 10 0      1245667778887732     24589999


Q ss_pred             eCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          116 TLGCTQAIEVILTVL----ARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      ++|+|++++.++.++    .++||.|++..-.|++.    ...++..|+++..++.+++  ..+|++.++.+++++++++
T Consensus        90 ~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~--g~~~~~~~~~~i~~~t~lv  167 (405)
T d1jf9a_          90 VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPTLFDEKTRLL  167 (405)
T ss_dssp             ESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SCBCGGGHHHHCCTTEEEE
T ss_pred             cCcHHHHHHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCC--CcCCHHHHHHhccCCcEEE
Confidence            999999999988763    47899999999999774    4555678999999998653  4689999999999999999


Q ss_pred             EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      ++++.+|.||.++|   +++|.++|+++|+++++|.+++.    +..+..+.....+   +++.|++|++|.+|  +|++
T Consensus       168 ~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~----g~~~id~~~~~~D---~~~~s~hK~~Gp~G--~g~l  235 (405)
T d1jf9a_         168 AITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAV----MHHPVDVQALDCD---FYVFSGHKLYGPTG--IGIL  235 (405)
T ss_dssp             EEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EEEEEGGGTTSCSS--CEEE
T ss_pred             EEecCCCcccccCc---hHHhhhHHHHcCCeeecccceec----cccccchhhcCCc---eeeccccccccCCC--ceee
Confidence            99999999999977   88899999999999999999987    3333444444443   99999999987666  6777


Q ss_pred             Eee
Q 020968          268 VTS  270 (319)
Q Consensus       268 ~~~  270 (319)
                      .+.
T Consensus       236 ~v~  238 (405)
T d1jf9a_         236 YVK  238 (405)
T ss_dssp             EEC
T ss_pred             eec
Confidence            663

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=2e-17  Score=148.73  Aligned_cols=199  Identities=18%  Similarity=0.192  Sum_probs=146.9

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC-------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT  120 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t  120 (319)
                      |.|+.+..     -++|+.+.+++.+.+.....+..+.       ...+++.|+.+++++      ++++++|++++|+|
T Consensus         3 iyld~a~~-----~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~------~~~~~~i~~~~~~T   71 (376)
T d1eg5a_           3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT   71 (376)
T ss_dssp             EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred             EEEECccc-----ccCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHH
Confidence            45655543     3778999999999887532111110       011345688889888      56889999999999


Q ss_pred             HHHHHHHHHh----cCCCCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968          121 QAIEVILTVL----ARPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG  193 (319)
Q Consensus       121 ~ai~~~~~~l----~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  193 (319)
                      ++++.++..+    ..+|+.|++....|+.+..   .++..|.+++.++++.  ++.+|++++++++++++++|++++++
T Consensus        72 ~~l~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~id~~~l~~~i~~~t~lv~is~v~  149 (376)
T d1eg5a_          72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN  149 (376)
T ss_dssp             HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred             HHHHhhhhcccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCC--CCeECHHHHHHhcCCCceEEEEECCc
Confidence            9999988643    4678899988888876544   4456699999998864  45799999999999999999999999


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      |+||...+.+++.++++. +..++++++|.++..    +..+..+..+   +..+++.|++|+++.+|.++.|+
T Consensus       150 ~~tG~~~~~~~i~~~~~~-~~~~~~~~vD~~q~~----g~~~~d~~~~---~~D~~~~s~~K~~gp~G~~~l~~  215 (376)
T d1eg5a_         150 NEVGTIQPVEDVTRIVKK-KNKETLVHVDAVQTI----GKIPFSLEKL---EVDYASFSAHKFHGPKGVGITYI  215 (376)
T ss_dssp             TTTCBBCCHHHHHHHHHH-HCTTCEEEEECTTTT----TTSCCCCTTT---CCSEEEEEGGGGTSCTTCEEEEE
T ss_pred             cccceeeeehhhhhhhhh-cccCceeEEEeeecc----cccccccccc---CccceecccceeecCCCceeEEe
Confidence            999999885554444332 334899999999876    3333333333   33499999999998889877776

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.74  E-value=8.1e-17  Score=144.90  Aligned_cols=228  Identities=16%  Similarity=0.130  Sum_probs=168.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..+++|+.+|   |..+...|.++++..++++.....      -++...-+.+|++.+|+|+        ..+..++.+
T Consensus        44 ~~~~~~FsSnd---YLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~--------g~e~all~~  112 (396)
T d2bwna1          44 KQDITVWCGND---YLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH--------QKEAALVFS  112 (396)
T ss_dssp             EEEEEECSCSC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHh--------CCCceeeee
Confidence            35689999998   455778899999999988763221      1222334578888899888        567899999


Q ss_pred             CHHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcC
Q 020968          118 GCTQAIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN  191 (319)
Q Consensus       118 G~t~ai~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~  191 (319)
                      ++..|+..++.++  ..+||.|+...-.|......++..+.++..++.+       |.+.+++.++    .+.+.|++..
T Consensus       113 sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-------d~~~l~~l~~~~~~~~~~~iv~eg  185 (396)
T d2bwna1         113 SAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  185 (396)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cchHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEeecc-------hHHHhhhHHhhhcccCceeEEEEe
Confidence            9999999999887  4688999999999998889999999998877642       6666666553    2445677778


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ..+.+|.+.+   +.+|++++++||+++++||+|+..+++.........+. .....|+++||+|+||..|   |+++++
T Consensus       186 vySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~  259 (396)
T d2bwna1         186 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  259 (396)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             eccCcccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchh
Confidence            8899999966   89999999999999999999998887654433222222 1234599999999999998   998874


Q ss_pred             CCCCCccchHHHHHHHHhhh--hcCCcchHHHHHH
Q 020968          271 DPNGILQDSGIVDSIKSFLN--ISSDPATFIQFLK  303 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~  303 (319)
                      .        ++++.++....  .++.+.++.+.+.
T Consensus       260 ~--------~~i~~l~~~~~~~ifStalpp~~~aa  286 (396)
T d2bwna1         260 A--------RMVDAVRSYAPGFIFSTSLPPAIAAG  286 (396)
T ss_dssp             H--------HHHHHHHHHCHHHHTSBCCCHHHHHH
T ss_pred             H--------HHHHHHHhhcchhhhcccCcHHHHHH
Confidence            3        57777776543  2444444444443

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=1.6e-16  Score=143.99  Aligned_cols=214  Identities=14%  Similarity=0.108  Sum_probs=157.8

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC------CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPARRAIADYLNRDLPYKLSPDDVYLTL  117 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~  117 (319)
                      +..++||+..+   |..+...|.+++++.++++.......+      ....+.+|++.+++++        ..+.+++++
T Consensus        44 G~~~l~f~s~d---YLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~--------g~e~al~~~  112 (401)
T d1fc4a_          44 GSHVINFCANN---YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL--------GMEDAILYS  112 (401)
T ss_dssp             SCEEEECCCSC---TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH--------TCSEEEEES
T ss_pred             CCEEEEEEccc---cccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhh--------cCCceEEec
Confidence            56689998887   344667899999999988764332111      2234568999999998        567899999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc------cCceEEEEcC
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD------ENTVALVIIN  191 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~v~l~~  191 (319)
                      +++.|+..++.++.+++|.|++....|..+...+...+.++..++.       .|.+.+++.+.      ....+|++..
T Consensus       113 SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~-------~d~~~le~~~~~~~~~~~~~~liv~eg  185 (401)
T d1fc4a_         113 SCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDG  185 (401)
T ss_dssp             CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEES
T ss_pred             chhhhhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcC-------CChHHHHHHHHHhhhcccCceEEEEcC
Confidence            9999999999999999999999999999988888888888876654       36666666542      2335666667


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEee
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      ..+..|...+   ++++.++|+++|+++|+||+++...++.........+.. .+..+++.|++|.++  |...|++.++
T Consensus       186 v~s~~G~~~~---L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~g~  260 (401)
T d1fc4a_         186 VFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAAR  260 (401)
T ss_dssp             EETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEEC
T ss_pred             CCCCCCchhh---hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCcccccCC
Confidence            6777887755   899999999999999999999998776543222222221 233588999999974  3334888774


Q ss_pred             CCCCCccchHHHHHHHHh
Q 020968          271 DPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~  288 (319)
                      .        ++++.++..
T Consensus       261 ~--------~~~~~l~~~  270 (401)
T d1fc4a_         261 K--------EVVEWLRQR  270 (401)
T ss_dssp             H--------HHHHHHHHH
T ss_pred             H--------HHHHHHHcC
Confidence            3        577766644

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.71  E-value=1.9e-16  Score=141.41  Aligned_cols=186  Identities=22%  Similarity=0.227  Sum_probs=141.8

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  162 (319)
                      +....|++.++++.        ..+..+++++++.|+..++.+++++||+|+++...|.+....+    ...|+++..++
T Consensus        59 PT~~~LE~~la~LE--------g~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d  130 (392)
T d1gc0a_          59 PTLNLLEARMASLE--------GGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD  130 (392)
T ss_dssp             HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHh--------CCcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCC
Confidence            34568888888887        4678899999999999999999999999999999998765544    46688888776


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       -|++++++++++++++|++.+|.||+..+.+   +++|+++|+++|+++++|++|..-..-    .++ .+.
T Consensus       131 ~-------~d~~~~~~ai~~~t~lv~~Esp~NP~l~v~D---i~~i~~ia~~~g~~~vvDnT~atP~~~----~Pl-~~G  195 (392)
T d1gc0a_         131 M-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ----RPL-ELG  195 (392)
T ss_dssp             T-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC----CGG-GGT
T ss_pred             c-------cCHHHHHHhCCCCCeEEEecccccceeeecc---hHHHHHHHHhcCCEEEEecCccCcccc----ChH-HhC
Confidence            4       3889999999999999999999999999965   999999999999999999999852221    122 222


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH--Hhhh-hcCCcchHHHHHHHH
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK--SFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~q~~~~~  305 (319)
                      .   .|++.|.+|.++..|--+|.+++.++       +.+.+++  ..+. .....++...+.+..
T Consensus       196 a---DivihS~TKyi~Ghsd~~~G~v~~~~-------~~~~~~r~~~~~~~~G~~~~p~da~ll~r  251 (392)
T d1gc0a_         196 A---DLVVHSATKYLSGHGDITAGIVVGSQ-------ALVDRIRLQGLKDMTGAVLSPHDAALLMR  251 (392)
T ss_dssp             C---SEEEEETTTTTTCSSSCCCEEEEECH-------HHHHHHHHTHHHHHTCCCCCHHHHHHHHH
T ss_pred             C---CEEEEecceeecCCcccccccccchh-------HHHHHHHHHHHHHccCCcCChhhHHHHHh
Confidence            2   39999999999876655555554432       3554443  3344 345566666655444

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.70  E-value=8.1e-16  Score=137.38  Aligned_cols=191  Identities=17%  Similarity=0.224  Sum_probs=144.4

Q ss_pred             CCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCC
Q 020968           82 CYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSH  155 (319)
Q Consensus        82 ~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g  155 (319)
                      .|+.  .+....|++.++++.        ..+..+++++|+.|+..++.+++++||+|+++...|.+...    .+...|
T Consensus        56 ~Y~R~~nPT~~~LE~~la~LE--------gg~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~G  127 (397)
T d1y4ia1          56 IYTRLGNPTTDALEKKLAVLE--------RGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFG  127 (397)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTT
T ss_pred             eeeCCCCHHHHHHHHHHHHHh--------CCccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCc
Confidence            4553  234457777777776        45678999999999999999999999999999999976543    456789


Q ss_pred             CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968          156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF  235 (319)
Q Consensus       156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~  235 (319)
                      +++..++.       -|++.+++++++++++|++.+|.||+..+.+   +++|+++|+++|+++++|++|..-..-    
T Consensus       128 i~~~~vd~-------~d~~~~~~~i~~~Tklv~~Esp~NP~l~v~D---i~~i~~iA~~~gi~~vvDnT~atP~~~----  193 (397)
T d1y4ia1         128 INVRFVDA-------GKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQ----  193 (397)
T ss_dssp             CEEEEECT-------TSHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----
T ss_pred             eEeeccCC-------CCHHHHHHhcCCCCcEEEecCCcccceeecc---cHHHHHHhhcCCceEEecCcccCcccC----
Confidence            99988874       3789999999999999999999999999955   999999999999999999999862211    


Q ss_pred             CCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHH--HHhhhh-cCCcchHHHHHHHH
Q 020968          236 VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI--KSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       236 ~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~q~~~~~  305 (319)
                      .++. +.   -.|++.|++|..+..+--+|.+++.++       +.+.++  ...+.. ....++...+.+..
T Consensus       194 ~Pl~-~G---aDivihS~TKyi~Ghsdvl~G~v~~~~-------~~~~~~r~~~~~~~~G~~l~p~~a~l~~r  255 (397)
T d1y4ia1         194 QPLQ-LG---ADIVVHSVTKYINGHGDVIGGIIVGKQ-------EFIDQARFVGLKDITGGCMSPFNAWLTLR  255 (397)
T ss_dssp             CGGG-GT---CSEEEEETTTTTTCSSCCCCEEEEECH-------HHHHHHHHTHHHHTTCCCCCHHHHHHHHH
T ss_pred             cchh-cC---CCEEEEehhhhcCCCcceeeeccCCCH-------HHHHHHHHHHHHhCcCCcCCHHHHHHHHc
Confidence            1221 22   239999999999998777777776553       344443  334443 44556666555443

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.69  E-value=1.3e-15  Score=138.28  Aligned_cols=203  Identities=18%  Similarity=0.237  Sum_probs=154.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC--CC------cCCHHHHHHHHHHHhhhCCCCCC-CCcE
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--ST------VGILPARRAIADYLNRDLPYKLS-PDDV  113 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~------~g~~~lr~~ia~~~~~~~g~~~~-~~~i  113 (319)
                      .+.++|.|+.+.-+     ++|+.+.+++.+.+.....+...  ..      ..+++.|+.+++++      +.+ ++.+
T Consensus        19 ~~~~~iYld~a~~~-----~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~ll------ga~~~~~i   87 (408)
T d1t3ia_          19 NGHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI------NARSPREI   87 (408)
T ss_dssp             TTEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGE
T ss_pred             CCCCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCcccE
Confidence            35567999998854     67899999998887653221111  01      12346777788887      344 5789


Q ss_pred             EEeCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCce
Q 020968          114 YLTLGCTQAIEVILTVL----ARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV  185 (319)
Q Consensus       114 ~~~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  185 (319)
                      ++++++++++++++.++    .++|++|++.+-.|++..    ..++..|.++..++...  ....+.+.++.+++++++
T Consensus        88 ~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~l~~~~~~~t~  165 (408)
T d1t3ia_          88 VYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSEKTK  165 (408)
T ss_dssp             EEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCTTEE
T ss_pred             EeecchHHHHHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccc--cccccHHHhhhccCCCce
Confidence            99999999999988763    468999999998887643    44566799999888754  345789999999999999


Q ss_pred             EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968          186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       186 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      +|++++.+|.||.+.+   +++|.++|+++|+++++|.+++.    |..+..+..++.+   +++.|..|+++.+|  +|
T Consensus       166 lv~i~~~~~~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~----g~~~id~~~~~~D---~~~~s~hK~~gp~G--~g  233 (408)
T d1t3ia_         166 LVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSA----PHYPLDVQLIDCD---WLVASGHKMCAPTG--IG  233 (408)
T ss_dssp             EEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EEEEEGGGTTSCTT--CE
T ss_pred             EEEEecccccccccCc---HHHHhhhhhccCceeeeccceec----ccccccccccCCc---eEEeccccccCCCC--cc
Confidence            9999999999999977   78889999999999999999987    4444445444443   89999999976555  67


Q ss_pred             EEEee
Q 020968          266 WLVTS  270 (319)
Q Consensus       266 ~i~~~  270 (319)
                      ++...
T Consensus       234 ~l~v~  238 (408)
T d1t3ia_         234 FLYGK  238 (408)
T ss_dssp             EEEEC
T ss_pred             ccccc
Confidence            77764

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.68  E-value=7.7e-16  Score=138.10  Aligned_cols=194  Identities=15%  Similarity=0.096  Sum_probs=148.3

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP  142 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p  142 (319)
                      .++-++++.+.++++.+ ..+  +...+|++.+++++        +.+.++++++||.|+.+++.++ +++||+|+++..
T Consensus        11 ~~~~~~~~~~~~~~~~~-~~G--~~v~~~E~~la~~~--------g~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~   79 (376)
T d1mdoa_          11 GAEELAAVKTVLDSGWI-TTG--PKNQELEAAFCRLT--------GNQYAVAVSSATAGMHIALMALGIGEGDEVITPSM   79 (376)
T ss_dssp             CHHHHHHHHHHHHHTCC-SSS--HHHHHHHHHHHHHH--------CCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHhcCCC-cCC--HHHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecc
Confidence            46667788888877543 223  35789999999999        4467899999999999999998 789999999999


Q ss_pred             CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      +|......+...|.+++.+++++ +.+.+|++.+++++++++++|+++|   ..|...   ++++|.++|+++|++||+|
T Consensus        80 ~~~~~~~ai~~~g~~pv~~d~~~-~~~~~d~~~l~~~i~~~tkaIi~~h---~~G~~~---~~~~i~~i~~~~~i~vIeD  152 (376)
T d1mdoa_          80 TWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPVH---YAGAPA---DLDAIYALGERYGIPVIED  152 (376)
T ss_dssp             SCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCC---CHHHHHHHHHHHTCCBCEE
T ss_pred             cccccccchhccccceeeecccc-cccCCCHHHHHHhcCCCCeEEEEeC---CCCCcc---chhHHHHHHHhcCceEEec
Confidence            99999999999999999999875 4568999999999999999998775   567764   4889999999999999999


Q ss_pred             CCCCCccC-CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          223 EVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       223 ~a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      ++++.... .+.   ..   ...+..++.+..+|.++.  ..-|.+++.+       .++.++++..+.
T Consensus       153 ~a~a~g~~~~~~---~~---g~~g~~~~Sf~~~K~l~~--g~GG~i~t~~-------~~l~~~~~~~~~  206 (376)
T d1mdoa_         153 AAHATGTSYKGR---HI---GARGTAIFSFHAIKNITC--AEGGIVVTDN-------PQFADKLRSLKF  206 (376)
T ss_dssp             CTTCTTCEETTE---ET---TSSSEEEEECCTTSSSCS--SSCEEEEESC-------HHHHHHHHHHTB
T ss_pred             cchhccCeeCCe---ec---ccccCccccCCCcCCCCC--CCCCEEEEec-------hhHHHHHHhhcc
Confidence            99987432 111   11   112223444455687543  3357777755       357777776653

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=4e-15  Score=132.44  Aligned_cols=185  Identities=17%  Similarity=0.163  Sum_probs=137.5

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh----hCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT----HSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~  163 (319)
                      ....|++.++.+.        ..+..+++++|+.|+.+ +.+++++||+|++..+.|.+....++    ..|+++..++.
T Consensus        50 t~~~le~~la~LE--------~~~~a~~fsSGMaAisa-ll~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  120 (380)
T d1ibja_          50 TRDALESLLAKLD--------KADRAFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT  120 (380)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHc--------CCceEEehhhHHHHHHH-HHHhhCCCCEEEEEecccccccchhhhhhccccccccccCc
Confidence            3467777777777        35678889999999974 56788999999999999987655553    56788777654


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS  243 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  243 (319)
                             .+.+++++++++++++|++..|.||+..+.+   +++|+++|+++|+++|+|+++..-..-    .++ .+  
T Consensus       121 -------~~~~~~~~ai~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vVDnT~atP~~~----~Pl-~~--  183 (380)
T d1ibja_         121 -------TKLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVLS----RPL-EL--  183 (380)
T ss_dssp             -------TSHHHHHHHCCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTTC----CGG-GT--
T ss_pred             -------chHHHHHHHhccCccEEEecccccccccccc---HHHHHHHHHHcCCeEEeeccccccccc----ccc-cc--
Confidence                   3788999999999999999999999999965   999999999999999999999762211    122 12  


Q ss_pred             CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968          244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~  305 (319)
                       +-.|++.|++|.++..|-.+|-+++.+.      ..+.++++..+.. ....++...+.+.+
T Consensus       184 -GaDiVvhS~TKyi~GhsDv~~G~v~~~~------~~~~~~~~~~~~~~G~~l~p~~a~ll~r  239 (380)
T d1ibja_         184 -GADIVMHSATKFIAGHSDVMAGVLAVKG------EKLAKEVYFLQNSEGSGLAPFDCWLCLR  239 (380)
T ss_dssp             -TCSEEEEETTTTTTCSSCCCCEEEEECS------HHHHHHHHHHHHHTTCBCCHHHHHHHHH
T ss_pred             -CCCEEEecccceeccccCccccccccch------hhHHHHHHhhccccCCcCCHHHHHHHHh
Confidence             2239999999999987776666554432      2466666655543 33455555555443

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=5.2e-15  Score=131.79  Aligned_cols=186  Identities=22%  Similarity=0.261  Sum_probs=139.6

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  162 (319)
                      +....|++.++++.        ..+..+++++|+.|+..++.+++++||+|++....|.+.    ...+...|..+..++
T Consensus        50 Pt~~~le~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d  121 (384)
T d1cs1a_          50 PTRDVVQRALAELE--------GGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD  121 (384)
T ss_dssp             HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred             HHHHHHHHHHHHHh--------CCCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhccccccccccc
Confidence            34567888888877        457899999999999999999999999999999999765    334455677776665


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                      .       .|.+.+++.+.+++++|++..|.||+..+.+   +++|+++|+++|+++|+|++|..-..-    .++ .+.
T Consensus       122 ~-------~d~~~~~~~~~~~t~~v~~EspsNP~l~v~D---i~~i~~ia~~~g~~~vVDNT~atP~~~----~Pl-~~G  186 (384)
T d1cs1a_         122 Q-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ----NPL-ALG  186 (384)
T ss_dssp             T-------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-GGT
T ss_pred             C-------CCHHHHHhhccccccEEEEeccccccceecc---HHHHhhhhhhcCcEEEEeccccCcccc----ccc-ccC
Confidence            3       3888999999999999999999999999965   999999999999999999999752211    122 122


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHH
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKS  304 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~  304 (319)
                         -.|++.|.||.++..|--+|-+++.+.      +.+.+.++..+. .....++...+.+.
T Consensus       187 ---aDiVvhS~TKyi~Ghsdv~~G~vv~~~------~~~~~~~~~~~~~~G~~~~p~~a~ll~  240 (384)
T d1cs1a_         187 ---ADLVLHSCTKYLNGHSDVVAGVVIAKD------PDVVTELAWWANNIGVTGGAFDSYLLL  240 (384)
T ss_dssp             ---CSEEEEETTTTTTCSSCCCCEEEEESS------HHHHHHHHHHHHHHTCBCCHHHHHHHH
T ss_pred             ---CCEEEEccccccccCCCcccccccCCc------hhhhhhhhhhhhhhhhccccccHHHHh
Confidence               239999999999887766666554432      245565655544 34455666655443

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=9.6e-15  Score=130.57  Aligned_cols=186  Identities=10%  Similarity=0.110  Sum_probs=137.8

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  162 (319)
                      +....|++.++++.        ..+..+++++|+.|+..++.+++++||+|++....|.+....+    ...|+++..++
T Consensus        58 Pt~~~le~~la~LE--------g~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d  129 (391)
T d1cl1a_          58 LTHFSLQQAMCELE--------GGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD  129 (391)
T ss_dssp             HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hhHHHHHHHHHHHh--------CCccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhccccccccccccc
Confidence            34567777777776        4578999999999999999999999999999999998755444    46688877766


Q ss_pred             ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968          163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGV  240 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~  240 (319)
                      .       .|.+.+++++++++++|++.+|.||+..+.+   +++++++|++  +|+++++|+++..-..-    .++ .
T Consensus       130 ~-------~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~~~----~Pl-~  194 (391)
T d1cl1a_         130 P-------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-D  194 (391)
T ss_dssp             T-------TCGGGGGGTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-G
T ss_pred             C-------ccccccccccccccceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchhhh----ccc-c
Confidence            4       3778889999999999999999999999966   7788888766  49999999999863321    122 1


Q ss_pred             cCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       241 ~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                      +.   -.|++.|.||.++..|--+|-+++.++.       ...++..... .....++...+.+.+
T Consensus       195 ~G---aDivvhS~TKy~~GhsdvlgG~vv~~~~-------~~~~~~~~~~~~G~~~~p~~a~ll~r  250 (391)
T d1cl1a_         195 FG---IDVSIQAATKYLVGHSDAMIGTAVCNAR-------CWEQLRENAYLMGQMVDADTAYITSR  250 (391)
T ss_dssp             GT---CSEEEEETTTTTTCSSSCCCEEEEECTT-------THHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             cc---cceEEeecchhccccccccccceecccc-------ccccchhhhhcccccCCchhhhhhhc
Confidence            22   2399999999999877766666555433       4444444443 344556666555443

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.65  E-value=6.3e-15  Score=131.73  Aligned_cols=186  Identities=15%  Similarity=0.140  Sum_probs=139.4

Q ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEe
Q 020968           87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD  162 (319)
Q Consensus        87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  162 (319)
                      +....|++.++++.        ..+..+++++|+.|+..++.+++++||+|++....|.+....    ....|+++..++
T Consensus        67 Pt~~~LE~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~  138 (398)
T d1qgna_          67 PTTVVLEEKISALE--------GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVID  138 (398)
T ss_dssp             HHHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHh--------CCceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhccccccccccccccc
Confidence            34567888888877        457899999999999999999999999999999999776544    456677777665


Q ss_pred             ccCCCCCcCCHHHHH-hhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968          163 LLPAKGWEVDLDAVE-ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF  241 (319)
Q Consensus       163 ~~~~~~~~~d~~~l~-~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  241 (319)
                      .       .+.+..+ ....+++++|++..|.||+..+.+   +++|+++|+++|+++++|+++..-..-    .++ .+
T Consensus       139 ~-------~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~D---i~~ia~ia~~~g~~~vVDnT~atP~~~----~Pl-~~  203 (398)
T d1qgna_         139 P-------ADVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-AL  203 (398)
T ss_dssp             S-------SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TT
T ss_pred             c-------cchhhhhhhhccccceEEEccCccccccccch---HHHHHHHHhhcCCEEEecceeeccccC----Cch-hh
Confidence            3       2444444 455678999999999999999965   999999999999999999999752211    111 12


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                         +-.|++.|+||.++..|--+|-+++.+       .++...++..+. .....++...+.+.+
T Consensus       204 ---GaDiVihS~TKy~~Ghsdv~~G~v~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~r  258 (398)
T d1qgna_         204 ---GADLVLHSATKFLGGHNDVLAGCISGP-------LKLVSEIRNLHHILGGALNPNAAYLIIR  258 (398)
T ss_dssp             ---TCSEEEECTTTTTTCSSSCCCEEEEEC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             ---CCCEEEEechhhcCcccceeehhhcch-------hhhhhhhhhhcccCCCcCCHHHHHHHHh
Confidence               223999999999999877777766654       346677666655 345566666665444

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.64  E-value=6.3e-17  Score=142.15  Aligned_cols=202  Identities=14%  Similarity=0.057  Sum_probs=140.4

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI  126 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~  126 (319)
                      +|||.....+     .+.|++++|+.++...+  ..|++++...+|++.+|+++        ..+++++++||++|+..+
T Consensus         1 ~~~~~~~~~t-----~p~p~v~~A~~~a~~g~--~~yg~~p~~~~le~~lA~~~--------G~~~~~~~~sGt~A~~~a   65 (343)
T d1m6sa_           1 MIDLRSDTVT-----KPTEEMRKAMAQAEVGD--DVYGEDPTINELERLAAETF--------GKEAALFVPSGTMGNQVS   65 (343)
T ss_dssp             CEECSCGGGC-----CCCHHHHHHHHTCCCCC--GGGTCCHHHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHH
T ss_pred             CcccccccCC-----CCCHHHHHHHHhhhcCC--cccCCCHHHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHH
Confidence            3677555433     34688999998764332  35888888899999999998        346789999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------Cce-EEEEcCCCCcc
Q 020968          127 LTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV-ALVIINPGNPC  196 (319)
Q Consensus       127 ~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~-~v~l~~p~npt  196 (319)
                      +.++.++||.+++..+.+..+.   ..+...+..+..++..   ....|++.+++.+..      .+. .++...++|+.
T Consensus        66 l~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  142 (343)
T d1m6sa_          66 IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK---NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSG  142 (343)
T ss_dssp             HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEE---TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTT
T ss_pred             HHHHhccCCceeccccccceeeecccccccccceeeccccc---cCccCHHHHHHhhhhhhcccccccccccccccccCC
Confidence            9999999999999998886543   3444555555555542   335689988888753      233 34455668899


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS  270 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~  270 (319)
                      |.+++.+++.+|.++|+++++++++|+++..+............. . .....+.  +|..+..|.+.|+++..
T Consensus       143 ~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~-~-~~~~~~~--~~~~~~~g~~~~~~~~~  212 (343)
T d1m6sa_         143 GRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA-G-YADSVMF--CLSKGLCAPVGSVVVGD  212 (343)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH-H-TCSEEEE--ESSSTTCCSSCEEEEEC
T ss_pred             ceecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhc-c-ccccccc--ccccccccccccccccc
Confidence            999999999999999999999999999998765432111111111 1 1123333  33334566667777764

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.62  E-value=1.2e-14  Score=130.71  Aligned_cols=196  Identities=17%  Similarity=0.176  Sum_probs=147.5

Q ss_pred             cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968           64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP  142 (319)
Q Consensus        64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p  142 (319)
                      ..+-.+++.+.++++.+. +...+...++++.+++++        +.+.++.+++||.|+.++++++ +++||+|+++..
T Consensus        12 ~~~~~~~~~~~l~~g~~~-~~~g~~v~~fE~~~a~~~--------g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~   82 (384)
T d1b9ha_          12 DDAERNGLVRALEQGQWW-RMGGDEVNSFEREFAAHH--------GAAHALAVTNGTHALELALQVMGVGPGTEVIVPAF   82 (384)
T ss_dssp             CHHHHHHHHHHHHTSCCB-TTTCSHHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHHcCCee-ecCCHHHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCCCEEEEecc
Confidence            355677788888876431 222235689999999998        4568999999999999999997 689999999999


Q ss_pred             CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      +|......+...|.+++.+++++ ..+.+|++.+++.+.+++++|++++   ..|..   .++.++.++|+++++++|+|
T Consensus        83 t~~a~~~ai~~~g~~p~~~d~~~-~~~~~d~~~~~~~i~~~tk~i~~~~---~~g~~---~d~~~i~~~~~~~~i~lieD  155 (384)
T d1b9ha_          83 TFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIMPVH---MAGLM---ADMDALAKISADTGVPLLQD  155 (384)
T ss_dssp             SCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBC---GGGCC---CCHHHHHHHHHHHTCCBCEE
T ss_pred             ccccccccccccccccccccccc-cccccchhhhccccccccccccccc---ccccc---cccccchhhhhhhhhhhhhh
Confidence            99999999999999999999864 4568999999999999998887654   55555   45889999999999999999


Q ss_pred             CCCCCccC-CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          223 EVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       223 ~a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      .+++.... .+..   +..+..  -.++..+.+|.++.  -.-|.+++.++.       +.++++..+
T Consensus       156 ~a~a~ga~~~g~~---~g~~g~--~~~~Sf~~~K~i~~--g~GG~i~t~~~~-------~~~~~~~~~  209 (384)
T d1b9ha_         156 AAHAHGARWQGKR---VGELDS--IATFSFQNGKLMTA--GEGGAVVFPDGE-------TEKYETAFL  209 (384)
T ss_dssp             CTTCTTCEETTEE---GGGSSS--CEEEECCTTSSSCS--SSCEEEEECTTC-------HHHHHHHHH
T ss_pred             hceecccccCCEe---cCcccc--cceecccccccccc--cccchhhhhhHH-------HHHHHHHHH
Confidence            99986442 2322   222222  23455556787543  335888887654       666666554

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.60  E-value=1.6e-14  Score=129.89  Aligned_cols=159  Identities=22%  Similarity=0.217  Sum_probs=125.6

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~  163 (319)
                      ....|++.++++.        ..+..+++++|..|+..++.+++++||+|++....|.+...    .+...|+++..++.
T Consensus        59 T~~~LE~~la~LE--------~~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  130 (421)
T d2ctza1          59 TVDVLEKRLAALE--------GGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceeccc
Confidence            4567778888777        45678999999999999999999999999999999976543    44678888887654


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC--ccCCCCCCCCCccc
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH--LAFGNTPFVPMGVF  241 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~--~~~~~~~~~~~~~~  241 (319)
                      .      -..+..+..+++++++|++.+|.||+..+.+   +++|+++|+++|+++++|++++.  +..     .|+ .+
T Consensus       131 ~------~~~~~~~~~~~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vvDnT~a~tP~~~-----~Pl-~~  195 (421)
T d2ctza1         131 E------ERPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLL-----RPL-AW  195 (421)
T ss_dssp             T------CCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSC-----CGG-GG
T ss_pred             c------cCcchhccccCCCceEEEEcCCCcceeEecc---hHHHHHHHHhcCCceEecccccccceec-----ccc-cc
Confidence            2      1455667778889999999999999999955   99999999999999999999973  111     122 12


Q ss_pred             CCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968          242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDP  272 (319)
Q Consensus       242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~  272 (319)
                      ..   .|++.|.||.++..|--+|-+++.+.
T Consensus       196 Ga---DiVvhS~TKyl~GHsD~l~G~vv~~~  223 (421)
T d2ctza1         196 GA---ALVTHSLTKWVGGHGAVIAGAIVDGG  223 (421)
T ss_dssp             TC---SEEEEETTTTTTCSSCCCCEEEEECS
T ss_pred             CC---cEEEEechhhccCCCCeEEEEEEcCC
Confidence            22   39999999999998777777766443

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.58  E-value=4.6e-15  Score=134.18  Aligned_cols=203  Identities=10%  Similarity=0.019  Sum_probs=144.1

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC--------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--------TVGILPARRAIADYLNRDLPYKLSPDDVYL  115 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~  115 (319)
                      .++++.|+.+.-+     ++|..+.+++.+.+..... ....        ....++.|+.+++++      +.+++++++
T Consensus        25 ~~~~iYLd~as~g-----~~p~~v~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~e~~R~~iA~ll------ga~~~ei~~   92 (404)
T d1qz9a_          25 PEGVIYLDGNSLG-----ARPVAALARAQAVIAEEWG-NGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVV   92 (404)
T ss_dssp             CTTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCC-CCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEE
T ss_pred             CCCCEEcCCcccc-----cCCHHHHHHHHHHHHHHhc-ccCcccccchhHHHHHHHHHHHHHHHh------CCCCCcEEE
Confidence            5679999999854     6678889999888754321 1110        112346788888887      568999999


Q ss_pred             eCCHHHHHHHHHHHh------cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEE
Q 020968          116 TLGCTQAIEVILTVL------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI  189 (319)
Q Consensus       116 ~~G~t~ai~~~~~~l------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l  189 (319)
                      |+++|++++.++...      ..+|+.|++.+-.+.+........+.++..+....  ....+++.+++++++++++|++
T Consensus        93 ~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~T~lV~i  170 (404)
T d1qz9a_          93 TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL--RLVDSPEELPQAIDQDTAVVML  170 (404)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE--EEESSGGGHHHHCSTTEEEEEE
T ss_pred             ecCchHHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceec--cccccchhHHHhcCCCceEEEE
Confidence            999999998876532      35788888888777654433333333322222211  1246788999999999999999


Q ss_pred             cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      ++.+|.||.+++   +++|+++|+++++++++|.++..    +..+..+.....   .+++.|.+|.+..+.-..|++..
T Consensus       171 ~~v~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~----g~~~~~~~~~~~---d~~~~s~~K~~~~~~g~~g~~~~  240 (404)
T d1qz9a_         171 THVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAGA---DYAIGCTYKYLNGGPGSQAFVWV  240 (404)
T ss_dssp             ESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHTC---SEEEECSSSTTCCCTTCCCEEEE
T ss_pred             ecccccccceec---HHHHhccccccccceeEEeeccc----cccccccccccc---eEEEEechhhcccCCceEEEEEe
Confidence            999999999977   89999999999999999999987    333334433333   38888999997555444566665


Q ss_pred             e
Q 020968          270 S  270 (319)
Q Consensus       270 ~  270 (319)
                      +
T Consensus       241 ~  241 (404)
T d1qz9a_         241 S  241 (404)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.57  E-value=3.8e-14  Score=124.14  Aligned_cols=182  Identities=20%  Similarity=0.205  Sum_probs=135.0

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEeccCC
Q 020968           91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPA  166 (319)
Q Consensus        91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~  166 (319)
                      .|++.+|++.        ..+..+++++|+.|+..++.+++++||+|+++.+.|.+.    ...++..|+++.+++.   
T Consensus         2 aLE~~la~Le--------g~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~---   70 (331)
T d1pffa_           2 ALEGKIAKLE--------HAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             HHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc---
Confidence            4778888887        467789999999999999999999999999999999664    3456788999988875   


Q ss_pred             CCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHH-HHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968          167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA-KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV  245 (319)
Q Consensus       167 ~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~  245 (319)
                          -|.+.+++++++++++|++..|.||+..+.+   ++++++++ +++++++|+|+++.....-.    ++ .+..  
T Consensus        71 ----~d~~~~~~~i~~~t~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~~~----pl-~~Ga--  136 (331)
T d1pffa_          71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----PL-DLGV--  136 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----GG-GGTC--
T ss_pred             ----cchhhHhhhcccccceeeeeccccccccccc---chhhhhhhhcccCceEEeecccccccccc----cc-ccCC--
Confidence                2788899999999999999999999999966   77777764 67899999999998633211    11 1222  


Q ss_pred             CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH--hhhh-cCCcchHHHHHHHH
Q 020968          246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS--FLNI-SSDPATFIQFLKSS  305 (319)
Q Consensus       246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~q~~~~~  305 (319)
                       .|++.|.+|.++..|-.+|-+++.++       +...+.+.  .+.. ....++...+.+.+
T Consensus       137 -DiVv~S~TKy~~Gh~d~~~G~v~~~~-------~~~~~~~~~~~~~~~G~~l~p~~a~ll~r  191 (331)
T d1pffa_         137 -DIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITR  191 (331)
T ss_dssp             -SEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHH
T ss_pred             -CEEEecchhhcCCCCccccccccccc-------cchhhhhhhhhhhccCCCCCHHHHHHHHH
Confidence             39999999999887666666655442       23333332  2332 44556665555443

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.55  E-value=5.5e-14  Score=125.90  Aligned_cols=189  Identities=17%  Similarity=0.161  Sum_probs=136.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc
Q 020968           68 VDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPY  146 (319)
Q Consensus        68 ~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~  146 (319)
                      ++++.+.++++.+...++  ...+|++.+++++        ..+.++.++++|.|+.++++++ .++||+|+++.-+|..
T Consensus         4 ~~~~~~~l~~~~~~~~G~--~~~~fE~~~~~~~--------~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a   73 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPLGE--FVNRFEQSVKDYS--------KSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIA   73 (374)
T ss_dssp             HHHHHHHHHHTTTSCTTH--HHHHHHHHHHHHH--------CCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGG
T ss_pred             HHHHHHHHhcCCcCCCCH--HHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHh
Confidence            356666776654433444  4689999999999        4568999999999999999998 6889999999999999


Q ss_pred             hHHHHhhCCCeEEEEeccCCCCCcCCHHH--HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCC
Q 020968          147 YEARATHSHLEVRHFDLLPAKGWEVDLDA--VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV  224 (319)
Q Consensus       147 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~--l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a  224 (319)
                      ....+...|++++.+++++.. ...+.+.  ++....++++++++++.   .|..   .+++++.++|+++|++||+|.|
T Consensus        74 ~~~~~~~~g~~pv~~Di~~~~-~~~~~~~~~~~~~~~~~~~aii~~~~---~G~~---~d~~~i~~~~~~~~i~vIED~a  146 (374)
T d1o69a_          74 SVAPICYLKAKPVFIDCDETY-NIDVDLLKLAIKECEKKPKALILTHL---YGNA---AKMDEIVEICKENDIVLIEDAA  146 (374)
T ss_dssp             GTHHHHHTTCEEEEECBCTTS-SBCHHHHHHHHHHCSSCCCEEEEECG---GGCC---CCHHHHHHHHHHTTCEEEEECT
T ss_pred             hHHHHhhccceeEeccccccc-ccccccccccchhccccccccccccc---ccch---hhhHHHHHHhhccCcchhhhhh
Confidence            999999999999999987432 2333333  33455667888888775   3554   3589999999999999999999


Q ss_pred             CCCccC-CCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          225 YDHLAF-GNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       225 ~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                      ++.... .+.   .+..+.+    +.+.||  +|.++..|  -|.+++.+       .++.++++..+
T Consensus       147 ~a~g~~~~~~---~~G~~gd----~~~fSf~~~K~l~tge--GG~i~tnn-------~~~~~~~~~~~  198 (374)
T d1o69a_         147 EALGSFYKNK---ALGTFGE----FGVYSYNGNKIITTSG--GGMLIGKN-------KEKIEKARFYS  198 (374)
T ss_dssp             TCTTCEETTE---ETTSSSS----EEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHHT
T ss_pred             hhhcceECCe---ecCCCCc----eEEEeccCcccccccc--ceeehhhh-------HHHHHhhcccc
Confidence            987442 222   1222222    555555  57754443  47777754       35777777654

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.55  E-value=4.5e-14  Score=129.61  Aligned_cols=215  Identities=14%  Similarity=0.106  Sum_probs=148.3

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV  125 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~  125 (319)
                      -.|||-....+    ..+.+..+.++   ...+.  .|+.++...+|++.+++++        ..+.++++++|+.|+.+
T Consensus        43 v~iDl~sDs~t----~am~~~~~aa~---~~GDd--~Y~~dpt~~~lE~~~a~l~--------G~e~al~~~SGt~An~~  105 (456)
T d1c7ga_          43 IYIDLLTDSGT----NAMSDKQWAGM---MIGDE--AYAGSENFYHLEKTVKELF--------GFKHIVPTHQGRGAENL  105 (456)
T ss_dssp             CSEECSCSSSC----CCEEHHHHHHT---TSCCC--CSSSCHHHHHHHHHHHHHH--------CCSEEEEESSHHHHHHH
T ss_pred             eeeEcccCCCc----ccchHHHHHHH---hccch--hccCCchHHHHHHHHHHHh--------CCCeEEECCCHHHHHHH
Confidence            35777766644    23344444433   22333  5888888999999999999        56789999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC--------CCCCcCCHHHHHhhhcc----CceEEEEcCCC
Q 020968          126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP--------AKGWEVDLDAVEALADE----NTVALVIINPG  193 (319)
Q Consensus       126 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~d~~~l~~~l~~----~~~~v~l~~p~  193 (319)
                      ++++++++||.|+.... +..........|...+.+..+.        ...+.+|++++++.+++    .+.++++.+++
T Consensus       106 a~~~l~~~Gd~Vi~~~~-f~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~  184 (456)
T d1c7ga_         106 LSQLAIKPGQYVAGNMY-FTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTV  184 (456)
T ss_dssp             HHHHHCCTTEEEEESSC-CHHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSB
T ss_pred             HHHHhcCCCCeEecCcc-hHHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecc
Confidence            99999999999887665 4444455667788777655421        12357899999998864    34578899998


Q ss_pred             Ccc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc--C-----CCCCCCCCccc----CCCCCeEEEecCccccCCCc
Q 020968          194 NPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA--F-----GNTPFVPMGVF----GSIVPVLTLGSISKRWIVPG  261 (319)
Q Consensus       194 npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~--~-----~~~~~~~~~~~----~~~~~vi~~~s~sK~~~~~G  261 (319)
                      |+. |.+++.+++++|.++|+++|+.+++|+++....  +     .+....++..+    ... -.++..|++|.++.++
T Consensus       185 n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~-ad~~s~s~~K~~~~~~  263 (456)
T d1c7ga_         185 NLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSY-ADGCTMSGKKDCLVNI  263 (456)
T ss_dssp             TTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTT-CSEEEEETTTTTCCSS
T ss_pred             cccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccc-cccEEEeccccccccc
Confidence            876 688999999999999999999999999975311  0     01011111110    000 1267779999976653


Q ss_pred             ceeeEEEeeCCCCCccchHHHHHHHHh
Q 020968          262 WRLGWLVTSDPNGILQDSGIVDSIKSF  288 (319)
Q Consensus       262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~  288 (319)
                        -|+++..+       +.+.++++..
T Consensus       264 --GG~i~~~~-------~~l~~~~r~~  281 (456)
T d1c7ga_         264 --GGFLCMND-------EEMFSAAKEL  281 (456)
T ss_dssp             --CEEEEESC-------HHHHHHHHHH
T ss_pred             --eeEEEcCC-------HHHHHHHHHh
Confidence              27777654       3466666544

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.54  E-value=1.8e-13  Score=122.25  Aligned_cols=185  Identities=16%  Similarity=0.176  Sum_probs=135.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~  163 (319)
                      ....|++.++++.        ..+..+++++|+.|+..++.+++++||+|++.+..|.+.    ...+...|+++..++.
T Consensus        60 T~~~le~~la~LE--------g~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~  131 (394)
T d1e5ea_          60 TVSNLEGKIAFLE--------KTEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT  131 (394)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeeccCC
Confidence            3457777777766        456789999999999999999999999999999999664    3456688999888875


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHH-HcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK-KLGIMVIADEVYDHLAFGNTPFVPMGVFG  242 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~D~a~~~~~~~~~~~~~~~~~~  242 (319)
                             -|++++++++++++++|++..|.||+..+.+   ++++++.++ ++++++++|+++..-..-    .++ .+.
T Consensus       132 -------~d~~~~~~~i~~~t~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~~~----~Pl-~~G  196 (394)
T d1e5ea_         132 -------AIPGEVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DFG  196 (394)
T ss_dssp             -------TSTTHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GGT
T ss_pred             -------CCHHHHHHhhcccccEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCcccC----Cch-hcC
Confidence                   2677899999999999999999999999966   777877665 468999999999762211    122 222


Q ss_pred             CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH--hhh-hcCCcchHHHHHHHH
Q 020968          243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS--FLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~q~~~~~  305 (319)
                      -   .|++.|.||.++..+.-+|.+++.+.       +.....+.  .+. .....++...+.+..
T Consensus       197 a---DiVvhS~TKy~~GhsDv~~G~v~~~~-------~~~~~~~~~~~~~~~G~~lsp~~a~ll~r  252 (394)
T d1e5ea_         197 V---DVVVHSATKYINGHTDVVAGLICGKA-------DLLQQIRMVGIKDITGSVISPHDAWLITR  252 (394)
T ss_dssp             C---SEEEEETTTTTTCSSCCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHH
T ss_pred             C---CEEEechhhhcCCCcccccccccchh-------hHHHHHHHHHHHHhhCCCCChHHHHHHHh
Confidence            2   39999999999887766666555432       34444332  233 244456665555443

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.53  E-value=1.5e-13  Score=119.98  Aligned_cols=170  Identities=17%  Similarity=0.170  Sum_probs=129.9

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      ++.++|...++.     ++.|++++|+.++.... ...|++++...++|+.+++++..       +..+++|+|+|+|+.
T Consensus         2 ~~~~~f~s~n~~-----g~~P~v~~A~~~a~~~~-~~~~~~~~~~~~l~~~la~~~g~-------~~~v~f~~sGt~An~   68 (345)
T d1v72a1           2 PPALGFSSDNIA-----GASPEVAQALVKHSSGQ-AGPYGTDELTAQVKRKFCEIFER-------DVEVFLVPTGTAANA   68 (345)
T ss_dssp             CCCCBCSCGGGC-----CCCHHHHHHHHHTTSSC-CCSTTCSHHHHHHHHHHHHHHTS-------CCEEEEESCHHHHHH
T ss_pred             CCCcCcCCCCCC-----CCCHHHHHHHHHHhccC-ccccCCCHHHHHHHHHHHHHHCC-------CcEEEECCchHHHHH
Confidence            567788876643     67899999999875443 34677777888999999999832       357999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccC------ce-EEEEcCCCC
Q 020968          125 VILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN------TV-ALVIINPGN  194 (319)
Q Consensus       125 ~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~-~v~l~~p~n  194 (319)
                      .++..++..++.+++....+..+.   ......+..+..+..  ..+...+++.+++.+.+.      +. .++...+.|
T Consensus        69 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  146 (345)
T d1v72a1          69 LCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVD--GPAAKLDIVRLRERTREKVGDVHTTQPACVSITQAT  146 (345)
T ss_dssp             HHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECC--CGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC
T ss_pred             HHHHHHHhcCCccccccccceeeechhhHHHhcCcccccccc--cccccccHHHhhhhhcccccccccccceeeeeeccc
Confidence            999999888888887776664432   334455666555443  344568999999887642      22 345566788


Q ss_pred             ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968          195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA  229 (319)
Q Consensus       195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~  229 (319)
                      +.|...+.++++++.++|+++|+++++|+++....
T Consensus       147 ~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~  181 (345)
T d1v72a1         147 EVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANA  181 (345)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHH
T ss_pred             cccccccchhhhhHHHHHHhcCceeeeccccccee
Confidence            89999999999999999999999999999997644

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=2.3e-13  Score=121.45  Aligned_cols=184  Identities=17%  Similarity=0.161  Sum_probs=129.5

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEec
Q 020968           88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDL  163 (319)
Q Consensus        88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~  163 (319)
                      ....|++.++++.        ..+..+++++|..|+..++ .++.+||+|++....|.+....+    ...|.++..++ 
T Consensus        56 T~~~lE~~la~LE--------~~~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~-  125 (393)
T d1n8pa_          56 NRENLERAVAALE--------NAQYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN-  125 (393)
T ss_dssp             HHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES-
T ss_pred             HHHHHHHHHHHHh--------CCceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee-
Confidence            3456666666665        3567788888899997665 66688999999999997765444    35566665553 


Q ss_pred             cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHH----HcCCEEEEeCCCCCccCCCCCCCCCc
Q 020968          164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK----KLGIMVIADEVYDHLAFGNTPFVPMG  239 (319)
Q Consensus       164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~----~~~~~li~D~a~~~~~~~~~~~~~~~  239 (319)
                             .+.+++++++++++++|++..|.||+..+.+   +++++++++    ++|+++++|++|..-..-    .++ 
T Consensus       126 -------~~~~~~~~~i~~~t~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP~~~----~Pl-  190 (393)
T d1n8pa_         126 -------DLLNDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS----NPL-  190 (393)
T ss_dssp             -------SHHHHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC----CGG-
T ss_pred             -------cchHHHHHHhhhhcceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCcccC----Cch-
Confidence                   2557899999999999999999999999966   777777777    679999999999763221    122 


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS  305 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~  305 (319)
                      .+..   .|++.|++|.++..|--+|-+++.++      +++.++++..+. .....++...+.+..
T Consensus       191 ~~GA---DiVvhS~TKyi~GhsDv~~G~v~~~~------~~~~~~l~~~~~~~G~~~~p~~a~ll~r  248 (393)
T d1n8pa_         191 NFGA---DIVVHSATKYINGHSDVVLGVLATNN------KPLYERLQFLQNAIGAIPSPFDAWLTHR  248 (393)
T ss_dssp             GGTC---SEEEEETTTTTTCSSCCCCEEEEESC------HHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             hhCC---CEEEEccccccCCCCccccceeeecc------hhHHHHHHHHHhhcCCCCChHHHHHHHh
Confidence            2222   39999999999886655555544332      346677776655 344556666555433

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.51  E-value=9e-14  Score=120.29  Aligned_cols=159  Identities=19%  Similarity=0.200  Sum_probs=113.8

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP  140 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~  140 (319)
                      .+++|++++|+.+...... ..|+++...+++|+.+++++      +.++++|++|+|+|++++.++..+.++++.+++.
T Consensus        10 ~g~~P~v~eAl~~~~~~~~-~~y~~~~~~~~lr~~ia~~~------g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~~   82 (340)
T d1svva_          10 VGMHPKILDLMARDNMTQH-AGYGQDSHCAKAARLIGELL------ERPDADVHFISGGTQTNLIACSLALRPWEAVIAT   82 (340)
T ss_dssp             SCCCHHHHHHHHHHTTCCC-CSTTCSHHHHHHHHHHHHHH------TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEE
T ss_pred             CCCCHHHHHHHHHHhhcCC-CCCCCCHHHHHHHHHHHHHh------CCCcceEEEcCCHHHHHHHHHHHHhhhccccccc
Confidence            3668999999998766543 46888878889999999999      4577899999999999999999999999999998


Q ss_pred             CCCCcchHH--HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc------cCceEEEEcCCCCccccccCHHHHHHHHHHH
Q 020968          141 RPGFPYYEA--RATHSHLEVRHFDLLPAKGWEVDLDAVEALAD------ENTVALVIINPGNPCGNVYTYQHLQKIAETA  212 (319)
Q Consensus       141 ~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~  212 (319)
                      .+.+..+..  .....+.........  .. ..+.+.......      ..+..++++.+.|+.|.+...+++..+.+.|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (340)
T d1svva_          83 QLGHISTHETGAIEATGHKVVTAPCP--DG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASC  159 (340)
T ss_dssp             TTSHHHHSSTTHHHHTTCCEEEECCT--TS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHH
T ss_pred             cccceeeeecccccccceeeeecccc--cc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhccc
Confidence            888865432  222233333323221  11 233333333221      1234455555555667777889999999999


Q ss_pred             HHcCCEEEEeCCCCCcc
Q 020968          213 KKLGIMVIADEVYDHLA  229 (319)
Q Consensus       213 ~~~~~~li~D~a~~~~~  229 (319)
                      ++++.++++|++|....
T Consensus       160 ~~~g~~~~~d~a~~~~~  176 (340)
T d1svva_         160 KEHGLYLFLDGARLASA  176 (340)
T ss_dssp             HHHTCEEEEECTTHHHH
T ss_pred             ccccceeeeeccceeee
Confidence            99999999999997543

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=1.7e-12  Score=118.68  Aligned_cols=216  Identities=14%  Similarity=0.013  Sum_probs=154.3

Q ss_pred             EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC---cEEEeCCHHHHHH
Q 020968           48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD---DVYLTLGCTQAIE  124 (319)
Q Consensus        48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~---~i~~~~G~t~ai~  124 (319)
                      .||...-.+     ..++.+.+.+...+..... .+...+...+++..+.+++.+.+|.+-...   .=.+|+|+|+|+.
T Consensus        56 ~n~asf~~t-----~~~~~~~~l~~~~~~~N~~-~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgSeA~~  129 (450)
T d1pmma_          56 QNLATFCQT-----WDDENVHKLMDLSINKNWI-DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACM  129 (450)
T ss_dssp             GBCSCCSCC-----CCCHHHHHHHHHTTTCBTT-CTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHHHHHH
T ss_pred             ccccccccC-----CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchHHHHH
Confidence            466554322     4567888888887765432 344344557888888888888777653222   2489999999999


Q ss_pred             HHHHHhcC------------CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968          125 VILTVLAR------------PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP  192 (319)
Q Consensus       125 ~~~~~l~~------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  192 (319)
                      +++.+...            ....+++....|.++.+.++..|+++..++.++ .++.+|++++++++++++.+|+.+.+
T Consensus       130 ~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~Vv~t~g  208 (450)
T d1pmma_         130 LGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFG  208 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBS
T ss_pred             HHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecC-CCCcCcHHHHHHHhhhCceEEEeeee
Confidence            88876521            124577778889999999999999999999865 45799999999999999999999999


Q ss_pred             CCccccccCHHHHHHHHH---HHHHcCCEEEEeCCCCCcc--CCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          193 GNPCGNVYTYQHLQKIAE---TAKKLGIMVIADEVYDHLA--FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~---~~~~~~~~li~D~a~~~~~--~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      ++.||.+=+.+++.++++   .|+++|+++++|.||+++.  +........  +.-..-..+..|.+|++ ..-..+||+
T Consensus       209 tt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~--~~~~~aDSi~~s~HK~~-~~p~g~g~l  285 (450)
T d1pmma_         209 VTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD--FRLPRVKSISASGHKFG-LAPLGCGWV  285 (450)
T ss_dssp             CTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS--TTSTTEEEEEEETTTTT-CCCSSCEEE
T ss_pred             eccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhh--hcccceeEeecChhhcc-CCCCCeeEE
Confidence            999999977665555544   4677899999999998753  222111111  11112246778999994 544668999


Q ss_pred             EeeCCC
Q 020968          268 VTSDPN  273 (319)
Q Consensus       268 ~~~~~~  273 (319)
                      +..++.
T Consensus       286 ~~r~~~  291 (450)
T d1pmma_         286 IWRDEE  291 (450)
T ss_dssp             EESSGG
T ss_pred             EecChh
Confidence            987643

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.45  E-value=1.3e-12  Score=115.88  Aligned_cols=187  Identities=13%  Similarity=0.117  Sum_probs=130.6

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCc--EEEeCCHHHHHHHHHHHhcCCCCEE
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDD--VYLTLGCTQAIEVILTVLARPGANI  137 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~--i~~~~G~t~ai~~~~~~l~~~gd~V  137 (319)
                      +.++.+++++.+.    ..+++++  ....++.|+.+++++      ++++++  +++++|+|+++++++..+..+++.+
T Consensus        10 ~~~~~V~~A~~~~----~~~~~~~~~~~~~~~~r~~l~~l~------~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~   79 (361)
T d1m32a_          10 TTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTALA------TASEGYTSVLLQGSGSYAVEAVLGSALGPQDKV   79 (361)
T ss_dssp             CCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHHH------CSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCE
T ss_pred             CCCHHHHHHhhhh----ccCCCcHHHHHHHHHHHHHHHHHh------CCCCCCEEEEECCCHHHHHHHHHHHhhhhcccc
Confidence            6678887765422    2223321  235678888999888      445554  7888999999999999998888877


Q ss_pred             EEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          138 LLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       138 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      ++....+..  ....+...+.....+..........+.+.......++++.+.+++.+|.||...+   +++|.++|+++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~---i~~i~~~~~~~  156 (361)
T d1m32a_          80 LIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHRY  156 (361)
T ss_dssp             EEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHH
T ss_pred             ceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchh---hhhhhhhhccc
Confidence            777655533  3344556666666655544333223344444455678899999999999999976   88889999999


Q ss_pred             CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEee
Q 020968          216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTS  270 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~  270 (319)
                      |+++++|.+++.    |..+..+..+.   -.+++.|..|+++.| |  +|++.+.
T Consensus       157 g~~~~vDa~qs~----G~~~~d~~~~~---~D~~~~s~~K~l~gp~G--~g~l~~~  203 (361)
T d1m32a_         157 GKTYIVDAMSSF----GGIPMDIAALH---IDYLISSANKCIQGVPG--FAFVIAR  203 (361)
T ss_dssp             TCEEEEECTTTT----TTSCCCTTTTT---CSEEEEESSSTTCCCSS--EEEEEEE
T ss_pred             ceeeEeeccccc----Ccccccccccc---cceEEeeecccccCCCC--ceEEEec
Confidence            999999999987    33333333333   349999999998654 6  6666654

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.44  E-value=2.3e-12  Score=115.05  Aligned_cols=195  Identities=17%  Similarity=0.157  Sum_probs=144.2

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCC--CEEEE
Q 020968           63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPG--ANILL  139 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~g--d~Vl~  139 (319)
                      ..++-.+++.+.++++.+   ...+...+|++.+++++        +.+.+++++++|.|+.++++++. .+|  ++|++
T Consensus        10 ~~~~~~~~v~~~l~~~~~---~~G~~v~~fE~~~~~~~--------g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~   78 (371)
T d2fnua1          10 LDKEDKKAVLEVLNSKQL---TQGKRSLLFEEALCEFL--------GVKHALVFNSATSALLTLYRNFSEFSADRNEIIT   78 (371)
T ss_dssp             CCHHHHHHHHHHHTSSCC---SSSHHHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEE
T ss_pred             CCHHHHHHHHHHHcCCCc---cCCHHHHHHHHHHHHHH--------CcCeEEEEecHHHHHHHHHHHhcccCCCCCeeec
Confidence            346677888888877544   32335789999999999        45679999999999999999984 334  58999


Q ss_pred             cCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEE
Q 020968          140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV  219 (319)
Q Consensus       140 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~l  219 (319)
                      +.-+|......+...|++++.+++++..  ..+.+.+++.+.+++++|++++   ..|...   +++++.++|+++++++
T Consensus        79 p~~t~~a~~~ai~~~G~~pv~vDi~~~~--~~~~~~~~~~~~~~t~avi~vh---~~G~~~---~~~~i~~~~~~~~i~l  150 (371)
T d2fnua1          79 TPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVD---YAGKSV---EVESVQKLCKKHSLSF  150 (371)
T ss_dssp             CSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEEC---GGGCCC---CHHHHHHHHHHHTCEE
T ss_pred             ccccccccceeeeccCcccccccccccc--cccchhhhhhccchhhcccccc---cccccc---ccccccccccccchhh
Confidence            9999999999999999999999987543  4566788888888999998886   456663   4889999999999999


Q ss_pred             EEeCCCCCccC-CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968          220 IADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       220 i~D~a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
                      |+|.+++.... .+..   ...+..  -.++....+|.+...+  -|.+++.+       .++.++++..+.
T Consensus       151 IEDaaqa~Ga~~~~~~---~G~~g~--~~~~Sf~~~K~l~~g~--GG~i~t~~-------~~~~~~~~~~~~  208 (371)
T d2fnua1         151 LSDSSHALGSEYQNKK---VGGFAL--ASVFSFHAIKPITTAE--GGAVVTND-------SELHEKMKLFRS  208 (371)
T ss_dssp             EEECTTCTTCEETTEE---TTSSSS--EEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHHTB
T ss_pred             ccchhhccCceecccc---CCcccc--cccccccccccccccc--ceEEEeec-------hhhhhhcccccc
Confidence            99999987442 2211   122221  1244444488854433  57777755       358888887654

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=1.7e-13  Score=125.39  Aligned_cols=175  Identities=13%  Similarity=0.073  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH-HHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968           90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCT-QAIEVILTVL---ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP  165 (319)
Q Consensus        90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t-~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  165 (319)
                      ..++..+.+++.+.+|..-. ...++++|++ .++.+++.+.   ..+++.|+++...|.++...+...|++.+.++..+
T Consensus        93 ~~le~~~~~~~~~l~g~~~~-~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~  171 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSV-ASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  171 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCCCcc-cCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeec
Confidence            45666677776665564433 3455556555 4554444444   34678999999999999999999999998887533


Q ss_pred             -CCCCcCCHHHHHhhhcc----CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCCCc
Q 020968          166 -AKGWEVDLDAVEALADE----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMG  239 (319)
Q Consensus       166 -~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~  239 (319)
                       .+.+.+|++++++++++    ++.+|++++|+|++|.+   .++++|+++|+++|+++++|++|+..... ........
T Consensus       172 ~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~---~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~  248 (445)
T d3bc8a1         172 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  248 (445)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeee---hhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhcc
Confidence             45578999999998853    57788899999999999   55999999999999999999999864311 10000001


Q ss_pred             ccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+..  -.+++.|.+|.++.|. ..|+++..+
T Consensus       249 ~~~~--vd~~~~s~hK~~~~p~-g~~~l~~~~  277 (445)
T d3bc8a1         249 RVGR--IDAFVQSLDKNFMVPV-GGAIIAGFN  277 (445)
T ss_dssp             HHSC--CCEEEEEHHHHHSCCS-SCEEEEESC
T ss_pred             CcCC--cceEEecCccccccCC-CCceeeeCC
Confidence            1111  1277889999876553 356666654

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=6.4e-13  Score=119.19  Aligned_cols=194  Identities=15%  Similarity=0.094  Sum_probs=134.3

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEeCCHHHHH
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQAI  123 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~~G~t~ai  123 (319)
                      -+=|+.|-      -+.++.+++++...    ...+.++  ...+.+.|+.++++++      ++ ...|+++.|+|+++
T Consensus        20 ~~l~~pGP------~~~~~~Vl~am~~~----~i~HRs~~f~~i~~ea~~~l~~llg------~~~~~~ii~~gsgT~a~   83 (388)
T d1h0ca_          20 QLLLGPGP------SNLPPRIMAAGGLQ----MIGSMSKDMYQIMDEIKEGIQYVFQ------TRNPLTLVISGSGHCAL   83 (388)
T ss_dssp             CEECSSSC------CCCCHHHHHHHTCC----CCCTTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCHHHHH
T ss_pred             CccccCCC------CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcHHHHH
Confidence            34466663      36678888877432    2222322  1224566666666662      33 33688899999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh-ccCceEEEEcCCCCcccccc
Q 020968          124 EVILTVLARPGANILLPRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVY  200 (319)
Q Consensus       124 ~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~  200 (319)
                      +.++..++.+|+++++....+...  ...+...+.....+...  .+..+|.+++++.+ ..+++++++++.+|.||.+.
T Consensus        84 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~  161 (388)
T d1h0ca_          84 EAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKD--PGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQ  161 (388)
T ss_dssp             HHHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred             HHHHHHhhccCCceeeecccceeeeeccccccccccccccccC--CccccchHHHHHHhccCCcceEEEeeeeecccccc
Confidence            999999999999999999888654  33445556655555543  33468888887765 44789999999999999996


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      +   +++|.++|+++|+++++|.+++..    ..+..+..+.-   .+++.|..|+++.|+ .+|++..
T Consensus       162 p---i~~i~~~~~~~g~~~~vD~~qs~g----~~~~d~~~~~~---D~~~~s~~K~~~gp~-g~~~~~~  219 (388)
T d1h0ca_         162 P---LDGFGELCHRYKCLLLVDSVASLG----GTPLYMDRQGI---DILYSGSQKALNAPP-GTSLISF  219 (388)
T ss_dssp             C---CTTHHHHHHTTTCEEEEECTTTTT----TSCCCTTTTTC---SEEEEESSSTTCCCT-TCEEEEE
T ss_pred             C---HHHHHHHhhcccccceeccccccc----ccccccccccc---ceecccccccccCCC-ceEEEee
Confidence            6   899999999999999999999862    23333333332   388999999986654 3455554

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.38  E-value=4.5e-13  Score=123.35  Aligned_cols=138  Identities=16%  Similarity=0.174  Sum_probs=107.7

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC-------EEEEcCCCCcchHHHHhhC
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA-------NILLPRPGFPYYEARATHS  154 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd-------~Vl~~~p~~~~~~~~~~~~  154 (319)
                      .|+.+++..+|++.+++++        ..+.++++++|++|+..+++.++++|+       .++.....+..+.......
T Consensus        70 ~y~~~~~~~~le~~~a~l~--------g~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~  141 (465)
T d1ax4a_          70 AYAGSRNYYDLKDKAKELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELN  141 (465)
T ss_dssp             CSSSCHHHHHHHHHHHHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHT
T ss_pred             hhccChHHHHHHHHHHHHH--------CCCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHc
Confidence            5888888899999999998        567899999999999999999875443       3455666666666777788


Q ss_pred             CCeEEEEecc--------CCCCCcCCHHHHHhhhcc----CceEEEEcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEE
Q 020968          155 HLEVRHFDLL--------PAKGWEVDLDAVEALADE----NTVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIA  221 (319)
Q Consensus       155 g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~  221 (319)
                      |...+.+...        ....+.+|++++++++++    .+..+++..++|.. |.+++.+++++|.++|+++|+++|+
T Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~  221 (465)
T d1ax4a_         142 GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVM  221 (465)
T ss_dssp             TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEE
Confidence            8887765432        223467899999998853    33455666666655 4678999999999999999999999


Q ss_pred             eCCCCC
Q 020968          222 DEVYDH  227 (319)
Q Consensus       222 D~a~~~  227 (319)
                      |+++..
T Consensus       222 D~~~~~  227 (465)
T d1ax4a_         222 DSARFC  227 (465)
T ss_dssp             ECTTHH
T ss_pred             ECcchh
Confidence            999864

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.38  E-value=4.5e-13  Score=122.20  Aligned_cols=166  Identities=12%  Similarity=0.098  Sum_probs=118.9

Q ss_pred             CCcEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHHHHHhhhcc----
Q 020968          110 PDDVYLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALADE----  182 (319)
Q Consensus       110 ~~~i~~~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~----  182 (319)
                      ....++..|++.++.+++.+..  .+++.|+++...|.++.+.+...|++.+.++..+ ...+.+|+++|++++++    
T Consensus       130 ~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~  209 (434)
T d2z67a1         130 VHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIEL  209 (434)
T ss_dssp             CEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHT
T ss_pred             cceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCHHHHHHHHHhhhhc
Confidence            3445556677777777777764  3789999999999999999999999998887533 34568999999999863    


Q ss_pred             -CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC-CCCCCCCCcccCCCCCeEEEecCccccCCC
Q 020968          183 -NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVP  260 (319)
Q Consensus       183 -~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~  260 (319)
                       ++.+|++++|++++|.+   .++++|+++|+++|+++++|++|+.... ....+......   .-.+++.|++|.++.|
T Consensus       210 ~~~~~v~~~~~~~~~g~~---~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~---~~D~~~~s~hK~l~~~  283 (434)
T d2z67a1         210 GNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY---RVDAVVSSSDKNLLTP  283 (434)
T ss_dssp             TCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS---CCSEEEEEHHHHHCCC
T ss_pred             CCceEEEeccCcCCCccc---cCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccC---CcceEEEcCccccccC
Confidence             56778888999999999   4599999999999999999999975331 11000111111   2238889999987554


Q ss_pred             cceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968          261 GWRLGWLVTSDPNGILQDSGIVDSIKSFL  289 (319)
Q Consensus       261 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~  289 (319)
                       ...|++...+       ...++++....
T Consensus       284 -~g~~~~~~~~-------~~~~~~~~~~~  304 (434)
T d2z67a1         284 -IGGGLVYSTD-------AEFIKEISLSY  304 (434)
T ss_dssp             -SSCEEEEESC-------HHHHHHHHTTS
T ss_pred             -CCccccccCc-------HHHHHHHHhhc
Confidence             3345666544       24666665443

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.37  E-value=2.8e-12  Score=117.76  Aligned_cols=174  Identities=13%  Similarity=0.060  Sum_probs=110.8

Q ss_pred             CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh-CCCeEEE
Q 020968           83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL-TLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH-SHLEVRH  160 (319)
Q Consensus        83 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~  160 (319)
                      +.|..-+.++++.+|+++        ..++.++ ++|++.++.+++.+++++||+|+++..+|.+....+.. .+.....
T Consensus        62 ~~~~~~i~eae~~~A~~~--------ga~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~  133 (462)
T d1c4ka2          62 LIHEGPAVAAEKHAARVY--------NADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVY  133 (462)
T ss_dssp             TTTBTHHHHHHHHHHHHT--------TCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEE
T ss_pred             cCCCHHHHHHHHHHHHHh--------CCCeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCcee
Confidence            444445678999999998        3355555 45567777777889999999999999999887655543 3444444


Q ss_pred             E--eccCCCC------CcCCHHHHH---------hhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968          161 F--DLLPAKG------WEVDLDAVE---------ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE  223 (319)
Q Consensus       161 ~--~~~~~~~------~~~d~~~l~---------~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~  223 (319)
                      .  +.++...      ..++.+.++         .....+++++++.+.+|-.|.+.+   +++|+++|+++|+++++|+
T Consensus       134 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~d---l~~I~~ia~~~g~~l~vD~  210 (462)
T d1c4ka2         134 LQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYN---AHEVVKRIGHLCDYIEFDS  210 (462)
T ss_dssp             ECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEEC---HHHHHHHHGGGBSEEEEEC
T ss_pred             eecccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhh---HHHHHHHHHHcCCEEEEec
Confidence            3  3322111      122333332         333445666666666678999966   8999999999999999999


Q ss_pred             CCCCccC-CCCCCCCCcccC-----CCCCeEEEecCccccCCCcceeeEEEe
Q 020968          224 VYDHLAF-GNTPFVPMGVFG-----SIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       224 a~~~~~~-~~~~~~~~~~~~-----~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      +|+.... .+..+.......     .....+++.|++|+++.++  .|.++.
T Consensus       211 A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~  260 (462)
T d1c4ka2         211 AWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIH  260 (462)
T ss_dssp             TTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEE
T ss_pred             hhhccccccCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEEE
Confidence            9986432 211111111111     1123589999999976654  355544

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=4.2e-11  Score=106.91  Aligned_cols=190  Identities=13%  Similarity=0.113  Sum_probs=127.6

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCC--CCCCCcEEEeCCHHHHHHHHHHHhc---CCCCE
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY--KLSPDDVYLTLGCTQAIEVILTVLA---RPGAN  136 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~--~~~~~~i~~~~G~t~ai~~~~~~l~---~~gd~  136 (319)
                      +.++.+++||..    ....++++.  ..++-+.+.+.+.+..+.  +.+++.|++|+|+|++++.++..+.   ++||+
T Consensus        13 ~v~~~V~~Am~~----~~~~hr~~~--f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~   86 (382)
T d2bkwa1          13 ILSGAVQKALDV----PSLGHTSPE--FVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKN   86 (382)
T ss_dssp             CCCHHHHHTTSC----CCCCTTSHH--HHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCE
T ss_pred             CCCHHHHHHhCc----ccCCCCcHH--HHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCc
Confidence            567888776632    222233321  122222233333333332  2356789999999999999999986   57999


Q ss_pred             EEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCHHHHHHHHHHHH
Q 020968          137 ILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAK  213 (319)
Q Consensus       137 Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~  213 (319)
                      |++....+..  +...++..+.....+...+ .+...+.+.+++.+. .+++++++++.+|.||...+   ++++.+.|+
T Consensus        87 vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---~~~~~~~~~  162 (382)
T d2bkwa1          87 VLVVSTGTFSDRFADCLRSYGAQVDVVRPLK-IGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQAIK  162 (382)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTCEEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHH
T ss_pred             eEEEEechhhhhhhhhccccccccccccccC-CCCccchhHHHHHhhhccchheeeeecccccccccc---chhhhhhcc
Confidence            9998876654  3456677888877665433 344578888887664 46789999999999999977   566666665


Q ss_pred             Hc--CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEee
Q 020968          214 KL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTS  270 (319)
Q Consensus       214 ~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~  270 (319)
                      ++  ++++++|.+++.    +..+..+....-   .+++.|..|++ +.+|  +|++++.
T Consensus       163 ~~~~~~~~~vDa~qs~----g~~pid~~~~gi---D~~~~s~~K~l~gP~G--~g~l~vs  213 (382)
T d2bkwa1         163 QTSPETFFVVDAVCSI----GCEEFEFDEWGV---DFALTASQKAIGAPAG--LSISLCS  213 (382)
T ss_dssp             HHCTTSEEEEECTTTT----TTSCCCTTTTTC---SEEEEESSSTTCCCSC--EEEEEEC
T ss_pred             ccccceeeeeeccccc----ccccccccccCe---eEEeecccccCcCCCc--hhhhhcc
Confidence            54  699999999987    334444444333   38999999998 4467  6777764

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.28  E-value=5.3e-11  Score=109.22  Aligned_cols=199  Identities=10%  Similarity=0.059  Sum_probs=138.6

Q ss_pred             cHHHHH-HHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCC-------CCCcEEEeCCHHHHHHHHHHHhcC---
Q 020968           64 ASVAVD-AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKL-------SPDDVYLTLGCTQAIEVILTVLAR---  132 (319)
Q Consensus        64 ~~~~~~-a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~-------~~~~i~~~~G~t~ai~~~~~~l~~---  132 (319)
                      ++.+.. .+...+... ...|...+...+++..+.+++.+..|.+-       ....-++|+|+++++..++.+-..   
T Consensus        86 ~~~~l~~~~~~~~n~n-~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~  164 (476)
T d1js3a_          86 YPAMLADMLCGAIGCI-GFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV  164 (476)
T ss_dssp             HHHHHHHHHHHHHCCC-CSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccc-ccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHH
Confidence            334433 334444332 22444455667899999999999887642       223568999999998888754321   


Q ss_pred             -------CC---------CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccC------ceEEEEc
Q 020968          133 -------PG---------ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN------TVALVII  190 (319)
Q Consensus       133 -------~g---------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~  190 (319)
                             .|         -.|++++-.|.++.+.+..+|+++..++.+  +++.+|+++|++.+++.      +.+|+.+
T Consensus       165 ~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl~~~~v~~d--~~~~md~~~L~~~i~~~~~~g~~p~~Vvat  242 (476)
T d1js3a_         165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT  242 (476)
T ss_dssp             HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HhhcccccCcccccccCceEEEecccccHHHHHHHHhcCceEEEeccC--CCCCcCHHHHHHHHHHHHhcCCCcEEEeec
Confidence                   11         157788899999999999999999888874  45789999999998642      3456677


Q ss_pred             CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC-CCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      ..++.+|.+   +++++|+++|+++++|+.+|.||+++..--.. ..-+..+..-  .-+..+++|+++.| ..+|.+++
T Consensus       243 aGtt~~G~i---Dpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~a--DSit~d~HK~l~~P-~~~g~~l~  316 (476)
T d1js3a_         243 LGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA--DSFNFNPHKWLLVN-FDCSAMWV  316 (476)
T ss_dssp             BSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC--SEEEECHHHHSSCC-SSCEEEEE
T ss_pred             CCCccceee---ccHHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCccc--ceeeecCccccccC-Ccceeecc
Confidence            779999999   67999999999999999999999885432111 1111112111  25566899996555 46777777


Q ss_pred             eC
Q 020968          270 SD  271 (319)
Q Consensus       270 ~~  271 (319)
                      .+
T Consensus       317 r~  318 (476)
T d1js3a_         317 KR  318 (476)
T ss_dssp             SC
T ss_pred             cc
Confidence            65

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.24  E-value=2.1e-10  Score=100.99  Aligned_cols=217  Identities=13%  Similarity=0.078  Sum_probs=144.5

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .+-|+|-..+.      ..++.+.+++...+.....-.      |+-....++++....++..+.+|.  ..-+|= ..+
T Consensus        23 ~~~l~LiaSEN------~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a--~~anVq-p~S   93 (405)
T d1kl1a_          23 HAKIELIASEN------FVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA--EHANVQ-PHS   93 (405)
T ss_dssp             HHSEECCTTCC------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCC--SEEECC-CSS
T ss_pred             HcCceEeccCC------cCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCC--Ccceee-ccC
Confidence            46788876662      456888888876664432222      222233456665555665555542  222222 346


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchH---H--HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYYE---A--RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~---~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p  192 (319)
                      ++.|+..++.+|++|||+|+..++...++.   .  .......+.+.++.++ +++.+|.+++++.+.. ++++|++...
T Consensus        94 Gs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~-~~~~ID~d~l~~~a~~~kPklIi~G~S  172 (405)
T d1kl1a_          94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIVAAAS  172 (405)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             chHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccch-hcccccHHHHHHHHHhhCcceEEeccc
Confidence            788889999999999999998875554322   1  1222345667777764 4568999999998754 7888887766


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+|.-.-     ++++.++|++.|.+++.|.+|.. ++-++.-+.|+ ...+    |+.+|.+|+  ++|-|-|.+++.+
T Consensus       173 ~y~r~~d-----~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~-~~aD----vvt~tThKt--lrGPrgg~I~~~~  240 (405)
T d1kl1a_         173 AYPRIID-----FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PYAH----FVTTTTHKT--LRGPRGGMILCQE  240 (405)
T ss_dssp             SCCSCCC-----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCS----EEEEESSST--TCCCSCEEEEECH
T ss_pred             ccccccC-----hHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChh-hhhh----heecccccc--ccCCCCceEEecc
Confidence            6664333     88999999999999999999984 55555444444 2222    788899999  5777889998843


Q ss_pred             CCCCccchHHHHHHHHhhhh
Q 020968          272 PNGILQDSGIVDSIKSFLNI  291 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~  291 (319)
                              ++.+++....-.
T Consensus       241 --------~~~~~i~~avfP  252 (405)
T d1kl1a_         241 --------QFAKQIDKAIFP  252 (405)
T ss_dssp             --------HHHHHHHHHHTT
T ss_pred             --------hhHHHHHhhhCc
Confidence                    466777665543

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.24  E-value=1.5e-10  Score=102.33  Aligned_cols=218  Identities=14%  Similarity=0.072  Sum_probs=143.6

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC------CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY------SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG  118 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G  118 (319)
                      .+-|+|-..+      -.+++.+++++...+.....-+|      +-....++++....++..+.+|.  ...+|- ..+
T Consensus        26 ~~~i~LiaSE------N~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a--~~anVq-p~S   96 (416)
T d1dfoa_          26 EEHIELIASE------NYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGA--DYANVQ-PHS   96 (416)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECC-CSS
T ss_pred             HcCceEecCc------ccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCC--Ccceee-ccc
Confidence            4668887666      24578888888766654322222      22223356655555555555542  222222 367


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---H--HhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCC
Q 020968          119 CTQAIEVILTVLARPGANILLPRPGFPYYEA---R--ATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINP  192 (319)
Q Consensus       119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~---~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p  192 (319)
                      ++.|+..++.++++|||+|+..+..+.++..   .  +.....+.+.++.+.  ...+|.+++++... .++++|++...
T Consensus        97 Gs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~--~~~IDyd~l~~~a~~~kPklIi~G~S  174 (416)
T d1dfoa_          97 GSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDA--TGHIDYADLEKQAKEHKPKMIIGGFS  174 (416)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCS--SSSBCHHHHHHHHHHHCCSEEEEECS
T ss_pred             CccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCC--ccCccHHHHHHHHHHhccceEEeccc
Confidence            7889999999999999999998877755322   1  122234666666653  34599999998765 47888887766


Q ss_pred             CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968          193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD  271 (319)
Q Consensus       193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~  271 (319)
                      .+|  ..++   ++++.++|++.|.+++.|.+|.. ++-++.-+.|+. ..    .|+.+|.+|+  ++|-|-|.+++.+
T Consensus       175 ~y~--r~~d---~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~-~a----Dvvt~tThKt--lrGPrggiI~~~~  242 (416)
T d1dfoa_         175 AYS--GVVD---WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP-HA----HVVTTTTHKT--LAGPRGGLILAKG  242 (416)
T ss_dssp             SCC--SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTT-TS----SEEEEESSST--TCCCSCEEEEESS
T ss_pred             ccc--cccC---HHHHHHHHHhcCceEEcchhhhhcceeccccCCccc-cc----ceeeeehhhc--ccCCCceEEEecc
Confidence            555  3333   88999999999999999999984 444444334432 22    2899999999  5777889999864


Q ss_pred             CCCCccchHHHHHHHHhhh
Q 020968          272 PNGILQDSGIVDSIKSFLN  290 (319)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~  290 (319)
                      ..     +++.+++.+..-
T Consensus       243 ~~-----~~~~~~i~~avf  256 (416)
T d1dfoa_         243 GS-----EELYKKLNSAVF  256 (416)
T ss_dssp             CC-----HHHHHHHHHHHT
T ss_pred             ch-----HhHHHHHHhhhC
Confidence            32     356666665554

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=2e-11  Score=112.15  Aligned_cols=138  Identities=17%  Similarity=0.168  Sum_probs=109.0

Q ss_pred             CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCE---------EEEcCCCCcchHHHHh
Q 020968           82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN---------ILLPRPGFPYYEARAT  152 (319)
Q Consensus        82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~---------Vl~~~p~~~~~~~~~~  152 (319)
                      .|+.+++..+|++.+++++        ..+.+++++++++|+..++.+++++|+.         +......|......+.
T Consensus        69 ~Y~~~~~~~~le~~~a~l~--------G~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~  140 (467)
T d2v1pa1          69 AFSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQ  140 (467)
T ss_dssp             CSSSCHHHHHHHHHHHHHT--------CCSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHH
T ss_pred             hhcCCchHHHHHHHHHHHH--------CCCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHH
Confidence            5887788899999999998        4567899999999999999998765543         4445555566677788


Q ss_pred             hCCCeEEEEeccCC--------CCCcCCHHHHHhhhcc----CceEEEEcCCCCcc-ccccCHHHHHHHHHHHHHcCCEE
Q 020968          153 HSHLEVRHFDLLPA--------KGWEVDLDAVEALADE----NTVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMV  219 (319)
Q Consensus       153 ~~g~~~~~~~~~~~--------~~~~~d~~~l~~~l~~----~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~l  219 (319)
                      ..|..+..++.+..        ....+|++++++.+.+    .++++++...+|.. |.+++.+++++|.++|++||+++
T Consensus       141 ~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l  220 (467)
T d2v1pa1         141 INGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPV  220 (467)
T ss_dssp             HTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCE
T ss_pred             HcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEE
Confidence            89999888776432        1246799999998753    34667777776644 68889999999999999999999


Q ss_pred             EEeCCCCC
Q 020968          220 IADEVYDH  227 (319)
Q Consensus       220 i~D~a~~~  227 (319)
                      ++|+++..
T Consensus       221 ~~D~a~~~  228 (467)
T d2v1pa1         221 VMDSARFA  228 (467)
T ss_dssp             EEECTTHH
T ss_pred             EEechhhh
Confidence            99999753

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.22  E-value=6.5e-11  Score=104.48  Aligned_cols=182  Identities=23%  Similarity=0.263  Sum_probs=126.3

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL  139 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~  139 (319)
                      +.++.+++++.+.    ..+++++.  ....+.++.+++++    +  .+.+.+++++|+|.+++.++..++.+|++|++
T Consensus        10 ~v~~~V~~am~~~----~~~hr~~~f~~i~~~~~~~l~~ll----~--~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv   79 (348)
T d1iuga_          10 RLHPKALEALARP----QLHHRTEAAREVFLKARGLLREAF----R--TEGEVLILTGSGTLAMEALVKNLFAPGERVLV   79 (348)
T ss_dssp             CCCHHHHHHHHSC----CCCTTSHHHHHHHHHHHHHHHHHH----T--CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCHHHHHHhcCC----CCCCCCHHHHHHHHHHHHHHHHHh----C--CCCCEEEEeCchHHHHHHHHHhccccccccee
Confidence            6788998887543    22233321  12344455555555    2  35667888999999999999999999999998


Q ss_pred             cCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--
Q 020968          140 PRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--  215 (319)
Q Consensus       140 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--  215 (319)
                      ....+.+  +...++.++..+..+......  .+++++   ....+.+.+++++..+.||...+   +++|.++|+++  
T Consensus        80 ~~~G~f~~~~~~~a~~~~~~~~~~~~~~g~--~~~~~~---~~~~~~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~~  151 (348)
T d1iuga_          80 PVYGKFSERFYEIALEAGLVVERLDYPYGD--TPRPED---VAKEGYAGLLLVHSETSTGALAD---LPALARAFKEKNP  151 (348)
T ss_dssp             EECSHHHHHHHHHHHHTTCEEEEEECCTTC--CCCTTT---SCCSSCSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred             ecchHHHHHHHHHHHhcCcccccccccCCC--cccccc---ccccCCCeeEEEecchhhhhhcc---HHHHHHHHHhhhc
Confidence            8777543  557778899888888764332  234332   33457789999999999999977   77778888776  


Q ss_pred             CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEee
Q 020968          216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTS  270 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~  270 (319)
                      +.++++|.+.+...    .+..+....-   .+++.|..|.+ +.||  +|+++++
T Consensus       152 ~~l~~vDavss~g~----~~i~~d~~~i---D~~~~~sqK~l~gppG--~~~v~~s  198 (348)
T d1iuga_         152 EGLVGADMVTSLLV----GEVALEAMGV---DAAASGSQKGLMCPPG--LGFVALS  198 (348)
T ss_dssp             TCEEEEECTTTBTT----BCCCSGGGTC---SEEEEESSSTTCCCSC--EEEEEEC
T ss_pred             cceeechhhhcccc----cccccccccC---CEEEeccccceecCCc--eeeeeec
Confidence            47888999887622    2233333322   38999999998 5567  6777764

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.18  E-value=1.8e-10  Score=102.25  Aligned_cols=187  Identities=12%  Similarity=0.136  Sum_probs=127.0

Q ss_pred             CCCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968           61 FRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL  138 (319)
Q Consensus        61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl  138 (319)
                      .+.++.++++|..    ...++++..  ....+.|+.++++++    .. +...|++++|+|.+++.++..+..+|++++
T Consensus        27 ~~v~~~Vl~am~~----~~~~hr~~ef~~i~~~~r~~l~~ll~----~~-~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~   97 (377)
T d1vjoa_          27 SNAHPSVLQAMNV----SPVGHLDPAFLALMDEIQSLLRYVWQ----TE-NPLTIAVSGTGTAAMEATIANAVEPGDVVL   97 (377)
T ss_dssp             CCCCHHHHHHHSS----CCCCTTSHHHHHHHHHHHHHHHHHHT----CC-CSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCCHHHHHHhCc----CCCCCCCHHHHHHHHHHHHHHHHHhC----CC-CCeEEEEcCcHHHHHHHHHHhccccccccc
Confidence            3677888887632    223344331  234566666766662    11 345777888899999999999999999999


Q ss_pred             EcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhh-hccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968          139 LPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL-ADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL  215 (319)
Q Consensus       139 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~-l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~  215 (319)
                      +....+..  +...+...+.....+......  ..+.+..+.. ...+++.+++++.+|.||.+.+   ++++.++|+++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---i~~i~~~~~~~  172 (377)
T d1vjoa_          98 IGVAGYFGNRLVDMAGRYGADVRTISKPWGE--VFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREF  172 (377)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCTTC--CCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred             eeeechhhhhhhhhhhhhcccccccccCCCC--cccchhhhhhhhcCcceeeeeeeeeccceeeec---hhhhhhhhhhc
Confidence            88877754  334555666666666543322  3455555443 4557889999999999999966   89999999999


Q ss_pred             CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      |.++++|.+++.    +..+..+..++   -.+++.|..|.++.|+ .+|++..
T Consensus       173 g~~~~vDa~~~~----g~~~~~~~~~~---~d~~~~s~~K~~~gp~-g~~~~~~  218 (377)
T d1vjoa_         173 GTLLLVDTVTSL----GGVPIFLDAWG---VDLAYSCSQKGLGCSP-GASPFTM  218 (377)
T ss_dssp             TCEEEEECTTTT----TTSCCCTTTTT---CSEEECCSSSTTCSCS-SCEEEEE
T ss_pred             cceEEEecchhh----hhhhhcccccc---cceeeecccccccCCC-EEEEecc
Confidence            999999999975    22223333333   3488999999865554 3455544

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=6.5e-10  Score=99.87  Aligned_cols=244  Identities=15%  Similarity=0.059  Sum_probs=144.6

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      +..++||..|.-..... --.|.+.+|+.++++...... +....-..++.+.+++..        ..+.+++++++++|
T Consensus        40 G~~ylD~~~g~~~~~lG-h~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~sGseA  110 (404)
T d2byla1          40 GRKYFDFLSSISAVNQG-HCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLF--------NYHKVLPMNTGVEA  110 (404)
T ss_dssp             CCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHH--------TCSEEEEESSHHHH
T ss_pred             CCEEEEecCCHHHHhhc-CCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcc--------cccccccccCcccc
Confidence            56778887763221111 246889999999887643221 112222334445455444        45789999999999


Q ss_pred             HHHHHHHhc----------CCCCEEEEcCCCCcchHHHHhhC--------C-----CeEEEEeccCCCCCcCCHHHHHhh
Q 020968          123 IEVILTVLA----------RPGANILLPRPGFPYYEARATHS--------H-----LEVRHFDLLPAKGWEVDLDAVEAL  179 (319)
Q Consensus       123 i~~~~~~l~----------~~gd~Vl~~~p~~~~~~~~~~~~--------g-----~~~~~~~~~~~~~~~~d~~~l~~~  179 (319)
                      +..+++...          ....+++...-.|......+...        +     ..+..++.       .|++.+++.
T Consensus       111 ~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~  183 (404)
T d2byla1         111 GETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALERA  183 (404)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECT-------TCHHHHHHH
T ss_pred             chhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecc-------cCHHHHHHh
Confidence            999987652          12346776666665422222111        1     11222222       378899998


Q ss_pred             hccCceEEEEcCC-CCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968          180 ADENTVALVIINP-GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW  257 (319)
Q Consensus       180 l~~~~~~v~l~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~  257 (319)
                      +.++..+.++.-| ....| ..++++-++++.++|+++|+++|+||++.+|...|... ....++-.+.++   +++|.+
T Consensus       184 l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-a~~~~gv~PDi~---~~gK~l  259 (404)
T d2byla1         184 LQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLGKAL  259 (404)
T ss_dssp             HTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred             cCCCCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccc-hhhhcCCCCCEE---EECchh
Confidence            8764444444455 44456 45677789999999999999999999999876555432 222333222233   789997


Q ss_pred             CCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hccccccc
Q 020968          258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       258 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      +...+.+|.+++..        ++.+.+.... ..+.+.++++..+....+  ++++++.+
T Consensus       260 ~gG~~p~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~  312 (404)
T d2byla1         260 SGGLYPVSAVLCDD--------DIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAE  312 (404)
T ss_dssp             GTTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             hCCCccceeeeech--------hhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHHhcCchh
Confidence            65558999999853        3443333222 123345666665544433  44444443

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.17  E-value=7.5e-10  Score=98.68  Aligned_cols=186  Identities=11%  Similarity=0.121  Sum_probs=128.2

Q ss_pred             CCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968           62 RTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL  139 (319)
Q Consensus        62 ~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~  139 (319)
                      ..++.+++|+..    ...++++..  ....+.|+.++++++    .. +++-|+++.|+|.+++.++..+..+|+++++
T Consensus        27 ~~~~~V~~Am~~----~~~~hr~~ef~~i~~~~r~~L~~ll~----~~-~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl~   97 (388)
T d2ch1a1          27 NCSKRVLTAMTN----TVLSNFHAELFRTMDEVKDGLRYIFQ----TE-NRATMCVSGSAHAGMEAMLSNLLEEGDRVLI   97 (388)
T ss_dssp             CCCHHHHHHTTS----CCCCTTCHHHHHHHHHHHHHHHHHHT----CC-CSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCHHHHHHhCc----CCCCCCCHHHHHHHHHHHHHHHHHhC----CC-CCeEEEEcCcHHHHHHHHHHHhccccccccc
Confidence            567888887632    223344431  234566666666663    21 3345666788999999999999999999998


Q ss_pred             cCCCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968          140 PRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG  216 (319)
Q Consensus       140 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~  216 (319)
                      ....+.+.  ...++..+.....+...+.  ...+.+.+++.. ..+++++++++.+|.||...+   ++++.++|++++
T Consensus        98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~---~~~i~~~~~~~~  172 (388)
T d2ch1a1          98 AVNGIWAERAVEMSERYGADVRTIEGPPD--RPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQHD  172 (388)
T ss_dssp             EESSHHHHHHHHHHHHTTCEEEEEECCTT--SCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTT
T ss_pred             cccccccccchhhhhhhcccccccccccc--cccchhhhhhhhccCCcceeeeeecccccccccc---hhhhcchhcccc
Confidence            87777553  3556677888777776543  346666666654 457889999999999999966   788889999999


Q ss_pred             CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968          217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT  269 (319)
Q Consensus       217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~  269 (319)
                      .++++|.+.+...    .+..+..+   .-.+++.|-.|.++.|+ .+|++..
T Consensus       173 ~~~~vD~~ss~g~----~pid~~~~---~~d~~~~s~~K~~~gp~-G~g~~~~  217 (388)
T d2ch1a1         173 CLLIVDAVASLCG----VPFYMDKW---EIDAVYTGAQKVLGAPP-GITPISI  217 (388)
T ss_dssp             CEEEEECTTTBTT----BCCCTTTT---TCCEEECCCC-CCCCCS-SCEEEEE
T ss_pred             ceeeeeeeecccc----cccchhcc---CceEEEEccccccCCCC-eEEEEec
Confidence            9999999998732    33333333   33488899999875542 2455554

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.15  E-value=8.3e-10  Score=98.60  Aligned_cols=247  Identities=18%  Similarity=0.162  Sum_probs=149.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|.-..... --.|.+.+++.++++....   .+.....+.+..+++.+.....  ...+.+++++++++|
T Consensus        35 dG~~ylD~~~g~~~~~lG-h~hp~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~~v~f~~sGseA  108 (387)
T d1vefa1          35 EGNEYIDCVGGYGVANLG-HGNPEVVEAVKRQAETLMA---MPQTLPTPMRGEFYRTLTAILP--PELNRVFPVNSGTEA  108 (387)
T ss_dssp             TSCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCCC---CCTTSCCHHHHHHHHHHHHTSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEEcchhHHhhhhc-CCcHHHHHHHHHHHHhhcc---cccccCCchHHHHHHHhhhhcc--ccceeeccccCchHH
Confidence            367788887653211111 2468999999998876432   1211223556666666554322  233579999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLPAKGWEVDLDAVEALADENTVAL  187 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v  187 (319)
                      +..+++...  ....+|+....+|++....+. ..|.            .+..++.       .|.+.+++.++++..+|
T Consensus       109 ~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~~~~~iAav  181 (387)
T d1vefa1         109 NEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEETAAV  181 (387)
T ss_dssp             HHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTEEEE
T ss_pred             HHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-------CCHHHHHHhcCCCeEEE
Confidence            999988642  234788888888866432222 2221            2223332       27899999998887777


Q ss_pred             EEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968          188 VIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW  266 (319)
Q Consensus       188 ~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~  266 (319)
                      ++.-.....|. ..+++-++++.++|+++|+++|.||++.+|...|... ....++-.+.++   +++|.+ ..|.-++.
T Consensus       182 i~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-~~~~~~v~PDi~---~~gK~l-~gG~~~~~  256 (387)
T d1vefa1         182 ILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKAL-GGGVPLGV  256 (387)
T ss_dssp             EECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGG-GTTSSCEE
T ss_pred             EEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCc-ccccCCcCCcee---eecccC-CCCccccc
Confidence            66543444565 5677889999999999999999999999986555322 222233223334   468985 56788888


Q ss_pred             EEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hccccccc
Q 020968          267 LVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       267 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      +++..        +....+.... +.+.+.++++..+....+  +.++++.+
T Consensus       257 ~~~~~--------~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~~~~~~  300 (387)
T d1vefa1         257 AVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWE  300 (387)
T ss_dssp             EEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHH
T ss_pred             cccce--------eeeeccccCCccccCCCCcchhhhcccchhhcccccccc
Confidence            87743        2333332221 223445666666655543  33444433

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.15  E-value=8.7e-10  Score=99.80  Aligned_cols=243  Identities=14%  Similarity=0.064  Sum_probs=146.0

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++|+..|.-.....+ -.|.+.++++++++..... ..+    ......+++.+....+   ..+.+++++++++|
T Consensus        50 ~G~~ylD~~~~~~~~~lGh-~hp~i~~ai~~~~~~~~~~-~~~----~~~~~~la~~~~~~~~---~~~~v~f~~sGseA  120 (427)
T d2gsaa_          50 DGNRYIDYVGTWGPAICGH-AHPEVIEALKVAMEKGTSF-GAP----CALENVLAEMVNDAVP---SIEMVRFVNSGTEA  120 (427)
T ss_dssp             TSCEEEESSGGGTTTTTCB-TCHHHHHHHHHHHTTCSCC-SSC----CHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred             CCCEEEEechhHHHHhccC-CcHHHHHHHHHHHHhcCcc-ccc----hhHHHHHHHHHHhhCC---ccccccccCCcHHH
Confidence            3677888876642211122 4689999999998764321 111    2455556666665433   45789999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHh--------hCCC------------eEEEEeccCCCCCcCCHHHHHhhh
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARAT--------HSHL------------EVRHFDLLPAKGWEVDLDAVEALA  180 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~--------~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l  180 (319)
                      +..+++...  ....+|+....+|++....+.        ..+.            ....++       .-|++.+++.+
T Consensus       121 ~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~le~~~  193 (427)
T d2gsaa_         121 CMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-------YNDLEAVKALF  193 (427)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-------TTCHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-------cchHHHHHHHH
Confidence            999998653  244788888888865322111        1111            111111       24889999988


Q ss_pred             cc---CceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968          181 DE---NTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR  256 (319)
Q Consensus       181 ~~---~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~  256 (319)
                      ++   +..+|++.....-.|. .++.+-++++.++|+++|+++|.||++.++. .+.. .....++-.+.++   .++|.
T Consensus       194 ~~~~~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r-~g~~-~~~~~~gi~PDi~---~~gK~  268 (427)
T d2gsaa_         194 AENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFR-IAYG-GVQEKFGVTPDLT---TLGKI  268 (427)
T ss_dssp             TTSTTTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTT-TBTT-CHHHHTTCCCSEE---EECGG
T ss_pred             HhCCCCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccce-eccc-chHHhcCCCHHHH---hhhhc
Confidence            74   3345555433334464 5566779999999999999999999998873 3322 2222233223344   46888


Q ss_pred             cCCCcceeeEEEeeCCCCCccchHHHHHHHHhh----hhcCCcchHHHHHHHHHH--hccccccc
Q 020968          257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL----NISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                      + ..|+.+|.+++.+        ++.+.+....    ..+.+.++++..++...+  ++++++.+
T Consensus       269 l-ggG~p~~a~~~~~--------~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~  324 (427)
T d2gsaa_         269 I-GGGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYE  324 (427)
T ss_dssp             G-GTTSCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred             c-CCCcceeeeeehH--------HHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHh
Confidence            5 5688999988743        4555444321    123345666665555443  44444443

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.11  E-value=3.5e-09  Score=94.94  Aligned_cols=208  Identities=14%  Similarity=0.049  Sum_probs=141.6

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE-eC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL-TL  117 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-~~  117 (319)
                      .+-|+|-..+      -..++.+++++-..+.....-+      |+-....++++....++..+.+|..-+...+=+ ..
T Consensus        31 ~~~l~LIaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~  104 (470)
T d1rv3a_          31 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  104 (470)
T ss_dssp             HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             HcCceEecCC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhcccccccc
Confidence            5668887766      2567888888877665432222      333334567777776777776664322223322 35


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----------HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceE
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEA----------RATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVA  186 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~  186 (319)
                      +++.|..+++.++++|||+|+..+....++..          .+.....+...++++++ ...+|.+++++... .++++
T Consensus       105 SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~-~~~IDyd~l~~~a~~~kPkl  183 (470)
T d1rv3a_         105 SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD-TGYIDYDRLEENARLFHPKL  183 (470)
T ss_dssp             SHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHHCCSE
T ss_pred             CCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecc-cCcccHHHHHHHHHhhCcce
Confidence            67889999999999999999987754433211          11112246677777654 35799999999765 47888


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      |++....+|-=.-     ++++.++|++.|.+++.|.+|.. ++-++.-+.|+ ...    .|+.+|.+|+  ++|-|-|
T Consensus       184 Ii~G~S~y~r~~d-----~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl-~~a----Dvvt~tTHKt--lrGPrgG  251 (470)
T d1rv3a_         184 IIAGTSCYSRNLD-----YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF-EHC----HVVTTTTHKT--LRGCRAG  251 (470)
T ss_dssp             EEECCSSCCSCCC-----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG-GTC----SEEEEESSGG--GCCCSCE
T ss_pred             EeechhhccccCC-----HHHHHHHHhccCCeEEecchhhhhhccccccCChh-hee----eeeeeehhhh--ccCCcce
Confidence            8877766664333     88899999999999999999984 55455444454 222    2999999999  5888889


Q ss_pred             EEEeeC
Q 020968          266 WLVTSD  271 (319)
Q Consensus       266 ~i~~~~  271 (319)
                      .|.+.+
T Consensus       252 iI~~~~  257 (470)
T d1rv3a_         252 MIFYRR  257 (470)
T ss_dssp             EEEEEC
T ss_pred             EEEEcc
Confidence            998865

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.10  E-value=2.3e-09  Score=95.84  Aligned_cols=208  Identities=13%  Similarity=0.042  Sum_probs=127.7

Q ss_pred             CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcE-EEeC
Q 020968           45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDV-YLTL  117 (319)
Q Consensus        45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i-~~~~  117 (319)
                      .+-|+|-..+      -..++.+++++-..+.....-.      |+.....++++....++..+.++.....-.+ +=..
T Consensus        27 ~~~l~LiaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp~  100 (463)
T d2a7va1          27 CRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY  100 (463)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             hcCeeEeccC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCcccc
Confidence            4557887666      2567888888876665432222      3333446777777666666666543221111 1234


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHhhCCC--eEEEEeccCCCCCcCCHHHHHhhhcc-CceE
Q 020968          118 GCTQAIEVILTVLARPGANILLPRPGFPYYEA--------RATHSHL--EVRHFDLLPAKGWEVDLDAVEALADE-NTVA  186 (319)
Q Consensus       118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~  186 (319)
                      +++.|+.+++.+|++|||+|+..++...++..        .....|.  +...+..++ .+..+|.+++++.... ++++
T Consensus       101 SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~-~~~~IDyd~~~~~a~~~kPkl  179 (463)
T d2a7va1         101 SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPRL  179 (463)
T ss_dssp             SHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCSE
T ss_pred             ccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccC-CCCcCcHHHHHHHHhhcCCce
Confidence            57888999999999999999988766644321        1122332  334444443 3457999999998754 7888


Q ss_pred             EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968          187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG  265 (319)
Q Consensus       187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G  265 (319)
                      |++....+|--.-     ++++.++|++.|.+++.|.+|.. ++-++.-+.|+ ...+    |+.+|.+|+  ++|-|-|
T Consensus       180 Ii~G~S~y~r~~d-----~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~-~~aD----vvt~tTHKT--lrGPrgG  247 (463)
T d2a7va1         180 IIAGTSAYARLID-----YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-KHAD----IVTTTTHKT--LRGARSG  247 (463)
T ss_dssp             EEECCSSCCSCCC-----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG-GTCS----EEEEESSGG--GCSCSCE
T ss_pred             EEecccccccccC-----HHHHHHHhhcccceEEechhhhhHHhhhhhhcChh-hhhh----hhhchhhhh--hcCCCce
Confidence            8877766664443     88999999999999999999984 55555444444 2222    888899999  5888889


Q ss_pred             EEEeeC
Q 020968          266 WLVTSD  271 (319)
Q Consensus       266 ~i~~~~  271 (319)
                      .|.+.+
T Consensus       248 iIl~~~  253 (463)
T d2a7va1         248 LIFYRK  253 (463)
T ss_dssp             EEEEEC
T ss_pred             EEEEcc
Confidence            998865

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.00  E-value=3.4e-08  Score=89.06  Aligned_cols=248  Identities=15%  Similarity=0.091  Sum_probs=141.1

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..... --+|.+.+++++++.......+. ....++. ..+++.+....  ..+.+.+++++++++|
T Consensus        41 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~-~~~~~~~-~~l~~~l~~~~--~~~~~~v~f~~sGseA  115 (429)
T d1s0aa_          41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFG-GITHAPA-IELCRKLVAMT--PQPLECVFLADSGSVA  115 (429)
T ss_dssp             TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCS-SEECHHH-HHHHHHHHHHS--CTTCCEEEEESSHHHH
T ss_pred             CCCEEEECcccHHHHhhc-CCcHHHHHHHHHHHHhcCCcccC-CccchHH-HHHHHHHHhhh--ccCcceeeeccccccc
Confidence            367789998774332122 24699999999988764321111 1122332 33334433322  2345789999999999


Q ss_pred             HHHHHHHhc-------CCCCEEEEcCCCCcchHH-HHhhCCC-------------eEEEEeccC-CCCCcC---CHHHHH
Q 020968          123 IEVILTVLA-------RPGANILLPRPGFPYYEA-RATHSHL-------------EVRHFDLLP-AKGWEV---DLDAVE  177 (319)
Q Consensus       123 i~~~~~~l~-------~~gd~Vl~~~p~~~~~~~-~~~~~g~-------------~~~~~~~~~-~~~~~~---d~~~l~  177 (319)
                      +..+++...       ....+|+.....|.+... .....+.             .....+... ......   +.+.++
T Consensus       116 ~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (429)
T d1s0aa_         116 VEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFA  195 (429)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHH
T ss_pred             hhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhhh
Confidence            998887553       233578888887765332 2222111             111122111 111112   344444


Q ss_pred             hhhc---cCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEec
Q 020968          178 ALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGS  252 (319)
Q Consensus       178 ~~l~---~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s  252 (319)
                      +.+.   ++..++++.-. .+..|. .++++-+++|.++|+++|+++|.||++.++...|... ....++-.+.++   .
T Consensus       196 ~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-~~~~~~v~PDi~---~  271 (429)
T d1s0aa_         196 RLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL---C  271 (429)
T ss_dssp             HHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---E
T ss_pred             hhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccccccc-ccccceeccccc---c
Confidence            4332   34445554433 355554 5688889999999999999999999999986555332 222333223344   4


Q ss_pred             CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh------hhcCCcchHHHHHHHHHH
Q 020968          253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL------NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~q~~~~~~l  307 (319)
                      ++|.++..+..+|.+++.+        ++.+.+....      ..+.+.++++..++...+
T Consensus       272 ~gK~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L  324 (429)
T d1s0aa_         272 LGKALTGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASL  324 (429)
T ss_dssp             ECGGGGTSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHH
T ss_pred             cccccccccccccchhhHH--------HHHhccCCCCCcceeecCCCCCCcccchhhhccc
Confidence            6899766678999999853        4666554321      123345566665555433

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=98.96  E-value=9.6e-09  Score=92.76  Aligned_cols=256  Identities=14%  Similarity=0.132  Sum_probs=141.7

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..... --.|.+.+++.+++.........  ....+.+..+++.+.+... .-..+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~lG-h~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA  113 (425)
T d1sffa_          38 EGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSHTCFQ--VLAYEPYLELCEIMNQKVP-GDFAKKTLLVTTGSEA  113 (425)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHTTTCSCCCTT--TEECHHHHHHHHHHHHHSS-CSSCEEEEEESSHHHH
T ss_pred             CCCEEEEcCcCHHhhccc-CCcHHHHHHHHHHHhhcCCcccc--cccCcHHHHHHHHHHhhhh-hcccceeeeeccccch
Confidence            366788888763211111 24689999999988764321111  1112344456666655332 1123578999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCCC-------------eEEEEecc--CCCCCcCC----HHHHHhhh
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARAT-HSHL-------------EVRHFDLL--PAKGWEVD----LDAVEALA  180 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~--~~~~~~~d----~~~l~~~l  180 (319)
                      ...+++...  ....+|+....+|++....+. ..|.             .....+..  ........    .+.+....
T Consensus       114 ~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (425)
T d1sffa_         114 VENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKND  193 (425)
T ss_dssp             HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHT
T ss_pred             hhhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhc
Confidence            999987653  234678888888877544333 2221             11111111  01110000    11111111


Q ss_pred             -c-cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968          181 -D-ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW  257 (319)
Q Consensus       181 -~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~  257 (319)
                       . .+..++++.......|. ..+++-+++|.++|+++|+++|.||++.++...+... ....++-.+.++   +++|.+
T Consensus       194 ~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~-a~~~~gv~PDi~---~~gK~l  269 (425)
T d1sffa_         194 AAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVAPDLT---TFAKSI  269 (425)
T ss_dssp             CCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSCCSEE---EECGGG
T ss_pred             ccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhh-HHHhcCCCccce---eccccc
Confidence             1 23344554433444564 5678889999999999999999999999876555332 222232222233   489996


Q ss_pred             CCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hccccccc
Q 020968          258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLK  315 (319)
Q Consensus       258 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~  315 (319)
                       ..|+.+|.+++.+        ++.+.+.... ..+.+.++++..++...+  ++++++.+
T Consensus       270 -~gG~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~  321 (425)
T d1sffa_         270 -AGGFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQ  321 (425)
T ss_dssp             -GTSSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             -CCCcceEEEEEcH--------HHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhh
Confidence             5579999999854        3444433222 223455666666655543  34444443

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=98.93  E-value=2.4e-08  Score=89.47  Aligned_cols=245  Identities=16%  Similarity=0.119  Sum_probs=133.8

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..++||..|.-..... --.|.+.+|+++++.....   ..........+.+++.+....    ..+.+.++.+++++
T Consensus        37 dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~sgs~a  108 (404)
T d1z7da1          37 NDKRYYDFLSAYSSVNQG-HCHPNILNAMINQAKNLTI---CSRAFFSVPLGICERYLTNLL----GYDKVLMMNTGAEA  108 (404)
T ss_dssp             TCCEEEESSHHHHTTTTC-BTCHHHHHHHHHHHTTCSC---CCTTSEEHHHHHHHHHHHHHH----TCSEEEEESSHHHH
T ss_pred             CCCEEEEccccHHHHhhh-cCcHHHHHHHHHHHHhCCC---cccccchHHHHHHHHhhhhcc----ccceeeeeccccch
Confidence            366788887763221111 1368899999998876332   111112223333444444321    45689999999999


Q ss_pred             HHHHHHHhc----------CCCCEEEEcCCCCcchHHHHhhC-CCeEE---EEeccCC--CCCcCCHHHHHhhhccCceE
Q 020968          123 IEVILTVLA----------RPGANILLPRPGFPYYEARATHS-HLEVR---HFDLLPA--KGWEVDLDAVEALADENTVA  186 (319)
Q Consensus       123 i~~~~~~l~----------~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~---~~~~~~~--~~~~~d~~~l~~~l~~~~~~  186 (319)
                      ...+++...          ....+++.....|.......... +....   ..+..+.  ....-+.+.++..+.++..+
T Consensus       109 ~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA  188 (404)
T d1z7da1         109 NETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVC  188 (404)
T ss_dssp             HHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTTEE
T ss_pred             HHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcCCCEE
Confidence            998876542          12246777776665533222211 11000   0000000  00012667777777654444


Q ss_pred             EEEcCC-CCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968          187 LVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL  264 (319)
Q Consensus       187 v~l~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~  264 (319)
                      .++.-| ....|.+ .+++-++++.++|+++|+++|.||++.+|...|... ....++-.+.++   +++|.++..+..+
T Consensus       189 avi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~-~~e~~gv~PDiv---t~gK~l~gG~~p~  264 (404)
T d1z7da1         189 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LLGKALSGGHYPI  264 (404)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGGTTSSCC
T ss_pred             EEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccc-cccccCCCCCEE---EEcccccCCCCCc
Confidence            444444 5556764 456668999999999999999999999876555332 223333323334   6899976655899


Q ss_pred             eEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968          265 GWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK  307 (319)
Q Consensus       265 G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l  307 (319)
                      |.+++.+        ++.+.++... ..+.+.++++..+....+
T Consensus       265 ~~v~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L  300 (404)
T d1z7da1         265 SAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEAL  300 (404)
T ss_dssp             EEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHH
T ss_pred             ccccchH--------HHHccCCCCCcCcCCCCCcchhhhhhhhh
Confidence            9999853        3444443322 123455677776665544

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=98.84  E-value=2.4e-09  Score=94.49  Aligned_cols=197  Identities=9%  Similarity=-0.050  Sum_probs=124.1

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----CCCCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC  119 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~  119 (319)
                      ...||+.|-      .+.|+.++++|.+.+....     ....++ +.-..++-+.+.+.+.+.++.. +..+|++++|+
T Consensus         3 ~~~~F~pGP------~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~-~~~~i~~~~gs   75 (361)
T d2c0ra1           3 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNP-TGYKVLFIQGG   75 (361)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCC-SSEEEEEESSH
T ss_pred             CCcccCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEECCC
Confidence            456787765      4778999999998764311     001111 1112233334444444444433 34478887776


Q ss_pred             H-HHHHHHHHHhcCCCCEEEEcCCCCc--chHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968          120 T-QAIEVILTVLARPGANILLPRPGFP--YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC  196 (319)
Q Consensus       120 t-~ai~~~~~~l~~~gd~Vl~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt  196 (319)
                      + .++.+++..+..+|+++++..-...  .+...++..|..+..+......  .++++.+++.+..... +   +.+|.|
T Consensus        76 ~t~~~ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~---~v~~~t  149 (361)
T d2c0ra1          76 ASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASN--YMTLPKLQEIQLQDNA-A---YLHLTS  149 (361)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGT--TCSCCCGGGCCCCTTE-E---EEEEES
T ss_pred             chHHHHHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeecccccc--ccchhhhhhhcccCcc-e---EEEEec
Confidence            4 5556666677888888876654332  3567788899998888775443  3677777776665442 2   235678


Q ss_pred             ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968          197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL  267 (319)
Q Consensus       197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i  267 (319)
                      |...+   +.++.++|+++|+++++|.+.+.    +..+..+..+   +  +.+.|.+|.++.+|.-.+++
T Consensus       150 g~~~~---~~~i~~~~~~~~al~~vDavss~----g~~~id~~~~---d--i~~~s~~k~~~~~~~~~~~~  208 (361)
T d2c0ra1         150 NETIE---GAQFKAFPDTGSVPLIGDMSSDI----LSRPFDLNQF---G--LVYAGAQKNLGPSGVTVVIV  208 (361)
T ss_dssp             EETTT---TEECSSCCCCTTSCEEEECTTTT----TSSCCCGGGC---S--EEEEETTTTTCCSSCEEEEE
T ss_pred             cccee---cceEEEeeccCCceEEEEeeccc----cccccccccc---e--eEEEecccccccccCcEEEE
Confidence            88755   66778899999999999999986    3233333332   2  66678899998887544444

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=98.80  E-value=2.3e-07  Score=83.60  Aligned_cols=245  Identities=15%  Similarity=0.064  Sum_probs=137.3

Q ss_pred             CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968           43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA  122 (319)
Q Consensus        43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a  122 (319)
                      .+..+||+..|.-..... --.|.+.++++++++.....   ......+.+..+++.+.+...  -..+.+++++++++|
T Consensus        39 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~---~~~~~~~~~~~la~~L~~~~~--~~~~~v~f~~sGseA  112 (431)
T d1zoda1          39 DGRAILDFTSGQMSAVLG-HCHPEIVSVIGEYAGKLDHL---FSEMLSRPVVDLATRLANITP--PGLDRALLLSTGAES  112 (431)
T ss_dssp             TCCEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCCCC---CTTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHH
T ss_pred             CCCEEEEcccCHHhhhhc-CCCHHHHHHHHHHHhhcccc---ccccccHHHHHHHHHHHHhCC--cccceeeecccccch
Confidence            366788887663111111 24589999999998764321   111122334456665554332  145789999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCC------------eEEEEeccCCCC-------CcCCHHH---HHh
Q 020968          123 IEVILTVLA--RPGANILLPRPGFPYYEARATHSHL------------EVRHFDLLPAKG-------WEVDLDA---VEA  178 (319)
Q Consensus       123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~~-------~~~d~~~---l~~  178 (319)
                      +..+++...  ...++|+...-.|++....+...+.            ....++......       ...+.+.   ++.
T Consensus       113 ~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (431)
T d1zoda1         113 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD  192 (431)
T ss_dssp             HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHHHH
Confidence            999988642  2347888888888765433322211            122222111000       0011222   222


Q ss_pred             hh---ccCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecC
Q 020968          179 LA---DENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI  253 (319)
Q Consensus       179 ~l---~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~  253 (319)
                      .+   .++..+.++.-| ....|. .++++-++++.++|+++|+++|.||++.++...|... ....++-.+.++   .+
T Consensus       193 ~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~-~~~~~gv~PDi~---~~  268 (431)
T d1zoda1         193 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPDIL---TL  268 (431)
T ss_dssp             HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EE
T ss_pred             HHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEecccccccccccccc-ccccCCCCcchh---cc
Confidence            22   122334444445 333454 5677789999999999999999999999876655432 222222222334   46


Q ss_pred             ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh---hhcCCcchHHHHHHHHH
Q 020968          254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL---NISSDPATFIQFLKSSR  306 (319)
Q Consensus       254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~  306 (319)
                      +|.+ ..|+.++.+++.+        +.........   ..+.+.++++..++...
T Consensus       269 gK~l-~gG~p~~av~~~~--------~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~  315 (431)
T d1zoda1         269 SKTL-GAGLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRV  315 (431)
T ss_dssp             CHHH-HTTSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHH
T ss_pred             cccc-ccccccceeeeee--------cchhhhhcccccccCCCCCCcchHHHHHHH
Confidence            8984 6678888888743        3444443321   12345566665554443

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.59  E-value=2.8e-07  Score=83.74  Aligned_cols=208  Identities=14%  Similarity=0.064  Sum_probs=115.9

Q ss_pred             CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC--CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968           44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ  121 (319)
Q Consensus        44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~  121 (319)
                      +..++||..|.-..... --.|.+.+++.+++....+..+.  .......+.+.+++.+....+  -..+.+++++++++
T Consensus        52 G~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~a~~lae~l~~~~~--~~~~~v~f~~sGse  128 (461)
T d1ohwa_          52 GNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAP--KGMSQLITMACGSC  128 (461)
T ss_dssp             SCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHHH
T ss_pred             CCEEEEcccCHHHHhhc-CCcHHHHHHHHHHHhhhhhcccccccccchHHHHHHHHHHHHhhhc--cCcceeeeecchhh
Confidence            55677876552211111 23578889998776542211111  111233556667776654322  24568999999999


Q ss_pred             HHHHHHHHhc----------------------------CCCCEEEEcCCCCcchH-HHHhhCCCe-----------EEEE
Q 020968          122 AIEVILTVLA----------------------------RPGANILLPRPGFPYYE-ARATHSHLE-----------VRHF  161 (319)
Q Consensus       122 ai~~~~~~l~----------------------------~~gd~Vl~~~p~~~~~~-~~~~~~g~~-----------~~~~  161 (319)
                      |+..+++...                            .+..+|+....+|++.. ......|-.           ....
T Consensus       129 Ave~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~  208 (461)
T d1ohwa_         129 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  208 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEE
T ss_pred             hhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCccc
Confidence            9999887542                            12357888888887632 222222211           0011


Q ss_pred             eccCCC-CC-----------cCCHHHHHhhhc------cCceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEe
Q 020968          162 DLLPAK-GW-----------EVDLDAVEALAD------ENTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIAD  222 (319)
Q Consensus       162 ~~~~~~-~~-----------~~d~~~l~~~l~------~~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D  222 (319)
                      +..... ..           ..+.+.+++.+.      .+..+|++.......| ..++.+-+++|.++|+++|+++|.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~D  288 (461)
T d1ohwa_         209 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD  288 (461)
T ss_dssp             CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceecc
Confidence            110000 00           012344554432      2344555554454455 4567788999999999999999999


Q ss_pred             CCCCCccCCCCCCCCCcccCC--CCCeEEEecCccccC
Q 020968          223 EVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWI  258 (319)
Q Consensus       223 ~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~  258 (319)
                      |++.++...|.- .....+.-  ...++   +++|.++
T Consensus       289 EV~tG~gRtG~~-~~~e~~gi~~~PDiv---~~gK~l~  322 (461)
T d1ohwa_         289 EVQTGGGSTGKF-WAHEHWGLDDPADVM---TFSKKMM  322 (461)
T ss_dssp             CTTTCSSTTSSS-SGGGGGCCSSCCSEE---EECGGGS
T ss_pred             cccccccccccc-ccccccccccCchhh---hhhhccc
Confidence            999998766642 22222321  12233   5789853

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=98.59  E-value=7.1e-08  Score=84.55  Aligned_cols=187  Identities=11%  Similarity=-0.031  Sum_probs=113.9

Q ss_pred             CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-----CCCCC-----CcCCHHHHHHHHHHHhhhCCCCCCCC-cEE
Q 020968           46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-----NCYSS-----TVGILPARRAIADYLNRDLPYKLSPD-DVY  114 (319)
Q Consensus        46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~  114 (319)
                      .+.||+.|-      .+.|+.+.+++.+.+.....     ...++     ..-+.+.|+.++++++      .+.+ .|+
T Consensus         3 ~~~nF~pGP------~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~------~~~~~~i~   70 (360)
T d1w23a_           3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ------IPNDYQIL   70 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEE
T ss_pred             ceeEeCCCC------cCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhC------CCCCCEEE
Confidence            467888876      36789999999987533110     00111     1123567777777773      3333 688


Q ss_pred             EeCCHHHHHHHHHHH-hcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968          115 LTLGCTQAIEVILTV-LARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN  191 (319)
Q Consensus       115 ~~~G~t~ai~~~~~~-l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~  191 (319)
                      +++|++.+...+... +.++++++++....+..  +...+...+...+.........  ..++.++.......    +++
T Consensus        71 ~~~gt~~~~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~  144 (360)
T d1w23a_          71 FLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSY--QSIPDFSEFQLNEN----DAY  144 (360)
T ss_dssp             EESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTS--CSCCCGGGCCCCTT----EEE
T ss_pred             EeCCcHHHHHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccccc--cchhhhhhcccccc----cce
Confidence            888888777766555 45677888777655533  4455666676666555432221  23333343333222    234


Q ss_pred             CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968          192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW  262 (319)
Q Consensus       192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~  262 (319)
                      ..|-||.+.+   +++|.++|+++|+++++|.+.+...    .+..+..+   +  +.+.+++|-++.+|.
T Consensus       145 ~~~~tg~~~~---~~~i~~~~~~~g~l~ivDavqs~g~----~~id~~~~---~--vd~~~~~~~k~~~~~  203 (360)
T d1w23a_         145 LHITSNNTIY---GTQYQNFPEINHAPLIADMSSDILS----RPLKVNQF---G--MIYAGAQKNLGPSGV  203 (360)
T ss_dssp             EEEESEETTT---TEECSSCCCCCSSCEEEECTTTTTS----SCCCGGGC---S--EEEEETTTTTSCTTC
T ss_pred             eEecCCcccc---ceeeeeccccceeeEEeeccccccc----cccccccc---c--ceEEeeccccccCCc
Confidence            4567788855   7788899999999999999998732    33333332   2  556677777666553

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=98.51  E-value=5.2e-08  Score=85.12  Aligned_cols=195  Identities=10%  Similarity=-0.065  Sum_probs=121.6

Q ss_pred             eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-----CCC-C----cCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968           47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-----YSS-T----VGILPARRAIADYLNRDLPYKLSPDDVYLT  116 (319)
Q Consensus        47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-----Y~~-~----~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~  116 (319)
                      +.||+.|-      ...|+++++++.+.+.......     .++ .    .-+.+.|+.++++++.    . +...|+++
T Consensus         2 ~~nF~pGP------~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~----~-~~~~v~~~   70 (360)
T d1bjna_           2 IFNFSSGP------AMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNV----P-SNYKVLFC   70 (360)
T ss_dssp             CEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTC----C-TTEEEEEE
T ss_pred             eEEeCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCC----C-CCCEEEEE
Confidence            57888775      4778999999998765321111     111 1    1245666677777732    1 34478888


Q ss_pred             CCHHHHHHHHHH-HhcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968          117 LGCTQAIEVILT-VLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG  193 (319)
Q Consensus       117 ~G~t~ai~~~~~-~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  193 (319)
                      +|++.+...++. .+..+++.+++....+..  +...++..|...+........  ..+.+.+++.+..+++++++++.+
T Consensus        71 ~gs~t~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~~~~  148 (360)
T d1bjna_          71 HGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVD--GLRAVKPMREWQLSDNAAYMHYCP  148 (360)
T ss_dssp             SSHHHHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEET--TEEEECCGGGCCCCSSCSCEEECS
T ss_pred             CCchHHHHhhhhhcccccccccceecccchhhhhHHHHhhcCccceeeccccCC--CcchhhhhhhhccCCceeEEEecc
Confidence            887666655544 456677888777666644  445566667666655543322  345566666667778888888888


Q ss_pred             CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968          194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV  268 (319)
Q Consensus       194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~  268 (319)
                      |.||...+.   ..+  .++.+++++++|.+.+...    .+....     .-.+.+.|.+|.++.|+.-.+++.
T Consensus       149 ~~t~~~~~~---~~i--~~~~~~~~v~vDa~~~~~~----~~vd~~-----~~dv~~~ss~k~~~~~~~~~~~~~  209 (360)
T d1bjna_         149 NETIDGIAI---DET--PDFGADVVVAADFSSTILS----RPIDVS-----RYGVIYAGAQKNIGPAGLTIVIVR  209 (360)
T ss_dssp             EETTTTEEC---CCC--CCCCTTCCEEEECTTTTTS----SCCCGG-----GCSEEEEETTTTTSSTTCEEEEEE
T ss_pred             cccccCccc---cce--ecccccceeeeeeeccccc----eeeeec-----cceeEEEEcccccccCCCceeEee
Confidence            888887553   233  3456789999999887632    111211     123788899999877665544444

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=97.98  E-value=8.8e-05  Score=65.95  Aligned_cols=195  Identities=22%  Similarity=0.277  Sum_probs=110.9

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHH--HhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968           49 PLGHGDPSAFPSFRTASVAVDAIVH--SVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE  124 (319)
Q Consensus        49 ~l~~g~~~~~~~~~~~~~~~~a~~~--~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~  124 (319)
                      -++.|.++    ...|+.+.+.+.+  .+..  +..|.|  ..|.-++--.+..++.+..|  ++.-+.=...|++....
T Consensus        68 fig~G~~~----~~~p~~i~~~~~~~~~~t~--ytPyqpE~sQG~Lq~l~e~q~~l~eltG--md~~n~s~~~ga~a~~~  139 (437)
T d1wyua1          68 FLGGGVRS----HHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAG--LEIANASMYDGATALAE  139 (437)
T ss_dssp             CCCSSCCC----CCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHHH
T ss_pred             ccCcccCC----ceeCHHHHHHHhChhhhhh--CCCcchHHHHHHHHHHHHHHHHHHHhhC--CCccccCchHHHHHHHH
Confidence            35566666    3556666443221  1111  223444  23333333333333433222  33333444567777666


Q ss_pred             HHHHHhc-CCCCEEEEcCCCCcchHH----HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccc
Q 020968          125 VILTVLA-RPGANILLPRPGFPYYEA----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV  199 (319)
Q Consensus       125 ~~~~~l~-~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~  199 (319)
                      .++.+.. ...+++++....++.+..    .++..|++++.++.+..   ..+.++    +++++.++++.+||. .|..
T Consensus       140 ~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~---~~~~~~----~~~~~Aavmi~~Pnt-~G~~  211 (437)
T d1wyua1         140 GVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGG---RTPLPE----VGEEVGAVVVQNPNF-LGAL  211 (437)
T ss_dssp             HHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTT---BCCCCC----CCTTEEEEEEESSCT-TSBC
T ss_pred             HHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEeeecccc---cchhhh----hccceeEEEEccccc-cccc
Confidence            6655443 245788999888876544    45678999998887532   222222    566888999999965 6887


Q ss_pred             cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEEEee
Q 020968          200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTS  270 (319)
Q Consensus       200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~~  270 (319)
                         ++++++.+++++.|.+++.|..-..+.  ..  .+...+.-   .|++++ +|.|+.|    |-..|++.+.
T Consensus       212 ---ed~~~i~~~~h~~G~l~~~~ad~~al~--~l--~~Pg~~Ga---Di~~g~-~q~fg~p~g~GGP~~G~~a~~  275 (437)
T d1wyua1         212 ---EDLGPFAEAAHGAGALFVAVADPLSLG--VL--KPPGAYGA---DIAVGD-GQSLGLPMGFGGPHFGFLATK  275 (437)
T ss_dssp             ---CCHHHHHHHHHHTTCEEEEECCTTGGG--TB--CCHHHHTC---SEEEEE-CTTTTCCCGGGCSCCEEEEEC
T ss_pred             ---cchHHHHHHhhhccceEEeeechhhhh--cc--cccccccc---ceEeec-cceeccccCCCcCcccccccc
Confidence               568999999999999887775432221  11  11122222   266666 6665554    4556777764

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=97.55  E-value=0.0014  Score=58.71  Aligned_cols=190  Identities=16%  Similarity=0.127  Sum_probs=109.7

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCC---CcC----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc---C
Q 020968           63 TASVAVDAIVHSVRSARFNCYSS---TVG----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA---R  132 (319)
Q Consensus        63 ~~~~~~~a~~~~~~~~~~~~Y~~---~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~---~  132 (319)
                      .+|.+.+.+.+....  +..|.|   +.|    +-++...|+++.      +++--+.=...|+|.+-..++.+..   +
T Consensus        77 y~P~v~~~~~~~~Ta--YTPYQPaEiSQG~LQalfEfQtmi~eLT------GMdvaNaS~yDGatA~aeA~~ma~r~~~~  148 (471)
T d1wyub1          77 YNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALT------GMDAITLEPAAGAHGELTGILIIRAYHED  148 (471)
T ss_dssp             CCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHH------TCSEEECCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             cCcchhhhHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHHh------CCCccccccchHHHHHHHHHHHHHHHhhh
Confidence            346666766543221  234544   222    235556666666      2333333445677766555544431   2


Q ss_pred             CC----CEEEEcCCCC-cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHH
Q 020968          133 PG----ANILLPRPGF-PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQK  207 (319)
Q Consensus       133 ~g----d~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~  207 (319)
                      .|    ..+++..+.+ ..........+..++.++..  .....+.+.++....++...+++.+|++..+..   ...++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~v~v~~p~~~g~~e---~~~~~  223 (471)
T d1wyub1         149 RGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNPNTLGLFE---RRILE  223 (471)
T ss_dssp             TTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCC---TTHHH
T ss_pred             cccccccccccCCcccccceeeeeecccceeeccccc--ccccccchhhhhhhhccccceeeccCCCccccc---chhhh
Confidence            22    3344444544 44455666777777777654  344678888888888888899999998876665   45788


Q ss_pred             HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC----CcceeeEEEeeC
Q 020968          208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSD  271 (319)
Q Consensus       208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~----~G~r~G~i~~~~  271 (319)
                      +.+++++.+..+++|.+--.....-.++   ...   ...+++.+..+.||.    .|--+|++.+.+
T Consensus       224 ~~~~~h~~g~~~~~~~~~~~~~~~l~~p---~~~---g~div~vg~~q~~G~P~~~GGP~~G~~a~~~  285 (471)
T d1wyub1         224 ISRLCKEAGVQLYYDGANLNAIMGWARP---GDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA  285 (471)
T ss_dssp             HHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEECG
T ss_pred             hHHHHHhccccccccccchhhhhhcccc---Ccc---cccccccccccccccccccccccccceeehh
Confidence            8999999998888887544332211111   111   112555555665544    356678887743

>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Bacterial cell division inhibitor SulA
domain: Hypothetical protein PA3008
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.03  E-value=1.5  Score=30.39  Aligned_cols=101  Identities=8%  Similarity=0.002  Sum_probs=63.0

Q ss_pred             cEEEeCCHHHHHHHHHHHh---cCC--CCEEEEcCCCCcchHHHHhhCCCe---EEEEeccCCCCCcCCHHHHHhhhccC
Q 020968          112 DVYLTLGCTQAIEVILTVL---ARP--GANILLPRPGFPYYEARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADEN  183 (319)
Q Consensus       112 ~i~~~~G~t~ai~~~~~~l---~~~--gd~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~  183 (319)
                      ++.....+.+.+.+++-.+   .+.  +.-|+.-.|-+.+|.......|+.   +..+.....   .-....+|++++.+
T Consensus         6 el~~~~~~~~~l~LL~P~L~~l~~~~~~rwi~wI~Pp~~p~a~~L~~~Gi~~~rll~v~~~~~---~d~lwa~EqaL~sg   82 (119)
T d1ofux_           6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRLG   82 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSH---HHHHHHHHHHHHHT
T ss_pred             eecccCCcHHHHHHHHHHHHHHHhcCCCcEEEEEcCCCccCHHHHHHcCCCCCeEEEEeCCCh---HHHHHHHHHHHhcC
Confidence            3445555555555555443   333  345777788888899999999986   444443211   11345667788877


Q ss_pred             ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968          184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI  220 (319)
Q Consensus       184 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  220 (319)
                      ....++.-+.+     ++..+++++--.|++.+...+
T Consensus        83 ~~~aVl~w~~~-----l~~~~~RRLqlAA~~g~t~~~  114 (119)
T d1ofux_          83 RSHTVVSWLEP-----LSRAARKQLSRAAQLGQAQSL  114 (119)
T ss_dssp             CEEEEEECCSS-----CCHHHHHHHHHHHHHHTCEEE
T ss_pred             CccEEEEcCCC-----CChHHHHHHHHHHHhcCCEEE
Confidence            77776666532     455678888777887776544

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=83.67  E-value=3.7  Score=32.01  Aligned_cols=95  Identities=14%  Similarity=0.014  Sum_probs=54.1

Q ss_pred             CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------
Q 020968          109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------  182 (319)
Q Consensus       109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------  182 (319)
                      +...+++|.|++..=..+++.|.+.|.+|++..-.-.......+..+...+.+++       -|.+++++.++.      
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV-------ADPASVERGFAEALAHLG   76 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT-------TCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEec-------CCHHHHHHHHHHHHHhcC
Confidence            3344555555443334445678889999988765555556666777766554443       266666665432      


Q ss_pred             CceEEEEcCC-CCccc--cccCHHHHHHHHHH
Q 020968          183 NTVALVIINP-GNPCG--NVYTYQHLQKIAET  211 (319)
Q Consensus       183 ~~~~v~l~~p-~nptG--~~~~~~~l~~i~~~  211 (319)
                      +...++ .+. ..+.+  .-.+.++++++.++
T Consensus        77 ~iDilV-nnAG~~~~~~~~~~~~~~~~~~~~v  107 (242)
T d1ulsa_          77 RLDGVV-HYAGITRDNFHWKMPLEDWELVLRV  107 (242)
T ss_dssp             SCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             CceEEE-ECCcccccCchhhCcchhhhccccc
Confidence            344444 433 22222  24577778777663

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=83.24  E-value=3.1  Score=32.38  Aligned_cols=97  Identities=15%  Similarity=0.069  Sum_probs=58.1

Q ss_pred             CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------
Q 020968          109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------  182 (319)
Q Consensus       109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------  182 (319)
                      ....+++|.|+...=..+++.|.+.|.+|++..-.-.......+.++.++..+..|-.     +.+.+++.++.      
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-----~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS-----DPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTT-----SHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCC-----CHHHHHHHHHHHHHHhC
Confidence            4455666666554444556778899999988765555566777788888887776542     56666665432      


Q ss_pred             CceEEEEcCCCCcccc--ccCHHHHHHHHH
Q 020968          183 NTVALVIINPGNPCGN--VYTYQHLQKIAE  210 (319)
Q Consensus       183 ~~~~v~l~~p~nptG~--~~~~~~l~~i~~  210 (319)
                      +...++.+....+.+.  -++.+++.+..+
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~  108 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLR  108 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHH
T ss_pred             CccEeccccccccccchhhhhccccccccc
Confidence            3455554433333332  345566655544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.04  E-value=4.1  Score=31.78  Aligned_cols=96  Identities=16%  Similarity=0.075  Sum_probs=55.5

Q ss_pred             CCCcEEEeCCHHHHHHH-HHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-----
Q 020968          109 SPDDVYLTLGCTQAIEV-ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----  182 (319)
Q Consensus       109 ~~~~i~~~~G~t~ai~~-~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----  182 (319)
                      +...+++| |++.+|-. +++.|.+.|.+|++..-.-.......+..+-+...+..|-.     |.+++++.++.     
T Consensus         5 ~gK~alIT-Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           5 TGKVALVS-GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVT-----QPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEe-CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecC-----CHHHHHHHHHHHHHHh
Confidence            34445555 44555554 45678889999888765545555666666767777766532     66666665532     


Q ss_pred             -CceEEEEcCCCCcccc--ccCHHHHHHHHH
Q 020968          183 -NTVALVIINPGNPCGN--VYTYQHLQKIAE  210 (319)
Q Consensus       183 -~~~~v~l~~p~nptG~--~~~~~~l~~i~~  210 (319)
                       ....++-+....+.+.  -++.+++++..+
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~  109 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILD  109 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhh
Confidence             3444443333333332  346677766655

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=82.75  E-value=4.1  Score=32.00  Aligned_cols=95  Identities=17%  Similarity=0.042  Sum_probs=56.3

Q ss_pred             CCCcEEEeCCHHHHHH-HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-----
Q 020968          109 SPDDVYLTLGCTQAIE-VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----  182 (319)
Q Consensus       109 ~~~~i~~~~G~t~ai~-~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----  182 (319)
                      +...+++|.|+ .+|- .+++.|.+.|.+|++..-.-......++..+-++..+..|-.     |.++++++++.     
T Consensus         4 ~gK~alVTGas-~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           4 SGKTVIITGGA-RGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVT-----IEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCSEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccC-----CHHHHHHHHHHHHHHc
Confidence            44455555554 4554 445667889998888765555566677777777777776532     56666665532     


Q ss_pred             -CceEEEEcCC-CCccc--cccCHHHHHHHHH
Q 020968          183 -NTVALVIINP-GNPCG--NVYTYQHLQKIAE  210 (319)
Q Consensus       183 -~~~~v~l~~p-~nptG--~~~~~~~l~~i~~  210 (319)
                       +...++ .+. ..+.+  .-.+.++++++.+
T Consensus        78 g~iDilV-nnAg~~~~~~~~~~~~~~~~~~~~  108 (254)
T d1hdca_          78 GSVDGLV-NNAGISTGMFLETESVERFRKVVE  108 (254)
T ss_dssp             SCCCEEE-ECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred             CCccEEE-ecCccccccccccccccccchhhh
Confidence             344444 443 22222  2456677776655

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=82.41  E-value=2.9  Score=32.96  Aligned_cols=95  Identities=14%  Similarity=0.050  Sum_probs=55.8

Q ss_pred             CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------C
Q 020968          110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------N  183 (319)
Q Consensus       110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~  183 (319)
                      ...+++|.|++..=..+++.|.+.|.+|++..-.-......++..|.++..+..|-.     |.++++++++.      +
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt-----~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT-----DQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCC-----CHHHHHHHHHHHHHHhCC
Confidence            344555555443333445677889988888765545566677777888877776543     66667665542      3


Q ss_pred             ceEEEEcCC-CCccc--cccCHHHHHHHHH
Q 020968          184 TVALVIINP-GNPCG--NVYTYQHLQKIAE  210 (319)
Q Consensus       184 ~~~v~l~~p-~nptG--~~~~~~~l~~i~~  210 (319)
                      ...++ ++. ..+.+  .-++.++++++.+
T Consensus        80 iDilV-nnAg~~~~~~~~~~~~~~~~~~~~  108 (256)
T d1k2wa_          80 IDILV-NNAALFDLAPIVEITRESYDRLFA  108 (256)
T ss_dssp             CCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred             ccEEE-eecccccccccccCCHHHHHhhhc
Confidence            44444 443 22222  2446677766554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.24  E-value=5.2  Score=31.26  Aligned_cols=98  Identities=14%  Similarity=0.162  Sum_probs=55.4

Q ss_pred             CCCCcEEEeCCHHHHHHH-HHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc
Q 020968          108 LSPDDVYLTLGCTQAIEV-ILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE  182 (319)
Q Consensus       108 ~~~~~i~~~~G~t~ai~~-~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~  182 (319)
                      ++...+++|.|+ .+|-. +++.|.+.|.+|++..-.-....    ...+..|.++..+..|-.     |.+++++.++.
T Consensus         3 l~gK~~lITGas-~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~   76 (251)
T d1vl8a_           3 LRGRVALVTGGS-RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS-----NYEEVKKLLEA   76 (251)
T ss_dssp             CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred             CCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHH
Confidence            344455555554 45544 45677889999888764433322    233556777777776542     66666665532


Q ss_pred             ------CceEEEEcCCCCcccc--ccCHHHHHHHHHH
Q 020968          183 ------NTVALVIINPGNPCGN--VYTYQHLQKIAET  211 (319)
Q Consensus       183 ------~~~~v~l~~p~nptG~--~~~~~~l~~i~~~  211 (319)
                            +...++-+.-..+.+-  -++.++++++.++
T Consensus        77 ~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~v  113 (251)
T d1vl8a_          77 VKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV  113 (251)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence                  4455543322333342  3577777776663

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=81.72  E-value=6  Score=27.06  Aligned_cols=76  Identities=13%  Similarity=0.151  Sum_probs=54.4

Q ss_pred             CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968          135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK  214 (319)
Q Consensus       135 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  214 (319)
                      ..-...-|.|.......+..|.+...+-+.+.    .-.+.+.++++.+.+.+++...+=|      ..+..++.+.+++
T Consensus        43 G~~~~giPVf~sV~eAv~~~~~~~SvIfVPp~----~a~dA~~EAi~agI~~iV~ITEgIP------~~D~~~i~~~~~~  112 (119)
T d2nu7a1          43 GTTHLGLPVFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDAGIKLIITITEGIP------TLDMLTVKVKLDE  112 (119)
T ss_dssp             TEEETTEEEESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCCCCC------HHHHHHHHHHHHH
T ss_pred             CcccCCCchhhHHHHHHHHhCCCeEEEeccHH----HHHHHHHHHHHCCCCEEEEecCCCC------HHHHHHHHHHHhh
Confidence            34444568898888888878887655544332    3556777788888888877766544      3778899999999


Q ss_pred             cCCEEE
Q 020968          215 LGIMVI  220 (319)
Q Consensus       215 ~~~~li  220 (319)
                      ++..+|
T Consensus       113 ~~~~li  118 (119)
T d2nu7a1         113 AGVRMI  118 (119)
T ss_dssp             HTCEEE
T ss_pred             CCCEEe
Confidence            988875

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=80.59  E-value=5  Score=31.38  Aligned_cols=95  Identities=11%  Similarity=-0.006  Sum_probs=55.0

Q ss_pred             cEEEeCCHHHHHHHH-HHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------Cc
Q 020968          112 DVYLTLGCTQAIEVI-LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT  184 (319)
Q Consensus       112 ~i~~~~G~t~ai~~~-~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~  184 (319)
                      .+++.+|++.+|-.+ ++.|.+.|.+|++..-.-.......+..+.+...+..+-.     |.+++++.++.      +.
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS-----SEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTT-----CHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecC-----CHHHHHHHHHHHHHHhCCC
Confidence            344444555555544 5667889999988775555556667777777777766432     55666555432      34


Q ss_pred             eEEEEcCCCCcccc--ccCHHHHHHHHHH
Q 020968          185 VALVIINPGNPCGN--VYTYQHLQKIAET  211 (319)
Q Consensus       185 ~~v~l~~p~nptG~--~~~~~~l~~i~~~  211 (319)
                      ..++-+......+.  .++.+++++..++
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~v  110 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKI  110 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHH
Confidence            44443332333332  4466777766653

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=80.54  E-value=4.1  Score=31.72  Aligned_cols=92  Identities=18%  Similarity=0.121  Sum_probs=52.8

Q ss_pred             EEEeCCHHHHHHH-HHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------Cce
Q 020968          113 VYLTLGCTQAIEV-ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV  185 (319)
Q Consensus       113 i~~~~G~t~ai~~-~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~  185 (319)
                      +++.+|++.+|-. +++.|.+.|.+|++..-.-.......+..+.+...+..|-.     |.+++++.++.      +..
T Consensus         6 ~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           6 IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVT-----DPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHHHHTCSCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEec-----CHHHhhhhhhhhhcccCCcc
Confidence            4444444455554 45667889999887765545555666666767666666432     56666665432      344


Q ss_pred             EEEEcCC-CCccc--cccCHHHHHHHHH
Q 020968          186 ALVIINP-GNPCG--NVYTYQHLQKIAE  210 (319)
Q Consensus       186 ~v~l~~p-~nptG--~~~~~~~l~~i~~  210 (319)
                      .++ .+. ..+.+  .-.+.+++++..+
T Consensus        81 ilV-nnAg~~~~~~~~~~~~~~~~~~~~  107 (243)
T d1q7ba_          81 ILV-NNAGITRDNLLMRMKDEEWNDIIE  107 (243)
T ss_dssp             EEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred             eeh-hhhhhccccccccccccccccccc
Confidence            444 443 23333  2346677766654