Citrus Sinensis ID: 021002

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
cccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccEEccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEEccccccccccccccccccccccccEEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHcHHccccccccccc
cccccEEEHHHcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHHccccHcccccEccccccHcEEEEEEcccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEEccccccccccHHcccccccccccEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHcccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHcccccEccc
menfpiidlsklngderSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEvndldwestfflrhlpvsnmaeipdlEDDYRKAMKEFAVELEKVAEQLLELLCENLgleegylkkvfygskgptfgtkvsnyppcpkpdlikglrahtdaGGIILLFQDDevsglqllkddqwvdvppmkhsIVINLGdqlevitngkyKSVLHRVIAQtegnrmsiasfynpgsdaviypapalvekeavnsqvypkfVFEDYMKLYAGLkfqakeprFEAMKNMETIVNLGPIATV
menfpiidlsklngdERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFlrhlpvsnmaeiPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPtfgtkvsnyppCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMetivnlgpiatv
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAeqllellcenlgleegylKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
********************MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAM**METIVN*******
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRF***********VQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVN*GP****
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
**NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIV********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query318 2.2.26 [Sep-21-2011]
P31237319 1-aminocyclopropane-1-car N/A no 1.0 0.996 0.846 1e-164
Q08507320 1-aminocyclopropane-1-car N/A no 1.0 0.993 0.821 1e-159
Q08508319 1-aminocyclopropane-1-car N/A no 1.0 0.996 0.811 1e-157
Q08506319 1-aminocyclopropane-1-car N/A no 1.0 0.996 0.802 1e-156
P05116315 1-aminocyclopropane-1-car N/A no 0.987 0.996 0.805 1e-156
Q9MB94319 1-aminocyclopropane-1-car N/A no 1.0 0.996 0.805 1e-155
Q43792319 1-aminocyclopropane-1-car N/A no 0.996 0.993 0.793 1e-153
P24157316 1-aminocyclopropane-1-car N/A no 0.971 0.977 0.798 1e-153
Q8S932318 1-aminocyclopropane-1-car N/A no 1.0 1.0 0.795 1e-153
P54847320 1-aminocyclopropane-1-car N/A no 0.993 0.987 0.788 1e-153
>sp|P31237|ACCO_ACTDE 1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1 Back     alignment and function desciption
 Score =  577 bits (1488), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 270/319 (84%), Positives = 300/319 (94%), Gaps = 1/319 (0%)

Query: 1   MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
           ME FP+ID+ KLNG+ER+ TME I DACENWGFFELVNHGISHEL+DTV+RLTKEHY KC
Sbjct: 1   MEAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKC 60

Query: 61  MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
           M+QRFK+MVA+KGLEAVQSE+NDLDWESTFFLRHLPVSN++EIPDLE D+RKAMKEFA +
Sbjct: 61  MEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAMKEFAEK 120

Query: 121 LEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
           LEK+AEQLL+LLCEN+GLE+GYLKK FYGSKGPTFGTKVSNYPPCP+P+LIKGLRAHTDA
Sbjct: 121 LEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDA 180

Query: 181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQT 240
           GGIILLFQD++VSGLQLLKD +W+DVPPMKHSIVIN+GDQLEVITNGKYKSV+HRVIAQ 
Sbjct: 181 GGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQP 240

Query: 241 EGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPR 299
           +GNRMSIASFYNPGSDAV+YPAPALV+KE     QVYPKFVFEDYMKLYAGLKFQAKEPR
Sbjct: 241 DGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKLYAGLKFQAKEPR 300

Query: 300 FEAMKNMETIVNLGPIATV 318
           FEAMK ME  VNLGPIAT+
Sbjct: 301 FEAMKAMENAVNLGPIATI 319

Actinidia deliciosa (taxid: 3627)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 7EC: .EC: 4
>sp|Q08507|ACCO3_PETHY 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1 Back     alignment and function description
>sp|Q08508|ACCO4_PETHY 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1 Back     alignment and function description
>sp|Q08506|ACCO1_PETHY 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1 Back     alignment and function description
>sp|P05116|ACCO1_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2 Back     alignment and function description
>sp|Q9MB94|ACCO_PRUMU 1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1 Back     alignment and function description
>sp|Q43792|ACCO_TOBAC 1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1 Back     alignment and function description
>sp|P24157|ACCO4_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1 Back     alignment and function description
>sp|Q8S932|ACCO_DIOKA 1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1 Back     alignment and function description
>sp|P54847|ACCO3_CUCME 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
73761685319 ACC oxidase 1 [Gossypium hirsutum] 0.993 0.990 0.886 1e-168
4090533318 ACC oxidase [Carica papaya] gi|38141531| 1.0 1.0 0.864 1e-166
14211818318 ACC oxidase [Carica papaya] gi|42491583| 1.0 1.0 0.864 1e-166
7595984318 ACC oxidase [Carica papaya] 1.0 1.0 0.858 1e-165
54606509318 1-aminocyclopropane-1-carboxylate oxidas 1.0 1.0 0.861 1e-165
117957299312 1-amino-cyclopropane-1-carboxylic acid o 0.981 1.0 0.871 1e-164
224113841318 1-aminocyclopropane-1-carboxylate [Popul 1.0 1.0 0.861 1e-164
224117980318 1-aminocyclopropane-1-carboxylate [Popul 1.0 1.0 0.861 1e-164
17224932318 1-aminocyclopropane-1-carboxylate oxidas 1.0 1.0 0.855 1e-164
343794778317 ACC oxidase 6 [Actinidia chinensis] 0.996 1.0 0.861 1e-164
>gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 280/316 (88%), Positives = 300/316 (94%)

Query: 3   NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMD 62
            FP+ID SKLNG+ER+A MEMI DACENWGFFELVNHGISHEL+DTV+RLTKEHY KCM+
Sbjct: 4   TFPVIDFSKLNGEERAAAMEMIKDACENWGFFELVNHGISHELMDTVERLTKEHYRKCME 63

Query: 63  QRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELE 122
           QRFK+MVASKGLEAVQSE+ND+DWESTFFLRHLP SNM+EIPDLE+DYRK MKEFAVELE
Sbjct: 64  QRFKEMVASKGLEAVQSEINDMDWESTFFLRHLPESNMSEIPDLEEDYRKVMKEFAVELE 123

Query: 123 KVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGG 182
           K+AEQLL+LLCENLGLE GYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGG
Sbjct: 124 KLAEQLLDLLCENLGLEPGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGG 183

Query: 183 IILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEG 242
           IILLFQDD+VSGLQLLKD QW+DVPPMKHSIVINLGDQLEVITNGKYKSV+HRVIAQT+G
Sbjct: 184 IILLFQDDKVSGLQLLKDGQWIDVPPMKHSIVINLGDQLEVITNGKYKSVMHRVIAQTDG 243

Query: 243 NRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEA 302
            RMSIASFYNPGSDAVIYPAPAL+EKEA  SQVYPKFVFEDYM LYA LKFQAKEPRFEA
Sbjct: 244 TRMSIASFYNPGSDAVIYPAPALLEKEADKSQVYPKFVFEDYMNLYADLKFQAKEPRFEA 303

Query: 303 MKNMETIVNLGPIATV 318
           MK +E+ VNLGPIATV
Sbjct: 304 MKTVESAVNLGPIATV 319

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|4090533|gb|AAC98808.1| ACC oxidase [Carica papaya] gi|38141531|emb|CAE53415.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] gi|54888572|emb|CAH68522.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|14211818|gb|AAK57516.1| ACC oxidase [Carica papaya] gi|42491583|gb|AAS16933.1| 1-aminocyclopropane-1-carboxylate oxidase 1 [Carica papaya] gi|51243480|gb|AAT99444.1| ripening related ACC oxidase 1 [Carica papaya] Back     alignment and taxonomy information
>gi|7595984|gb|AAF64528.1|AF254125_1 ACC oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|54606509|emb|CAH64841.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|117957299|gb|ABK59094.1| 1-amino-cyclopropane-1-carboxylic acid oxidase 3 [Manihot esculenta] Back     alignment and taxonomy information
>gi|224113841|ref|XP_002316589.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222859654|gb|EEE97201.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224117980|ref|XP_002331528.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222873752|gb|EEF10883.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] Back     alignment and taxonomy information
>gi|17224932|gb|AAL37174.1|AF320071_1 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|343794778|gb|AEM62885.1| ACC oxidase 6 [Actinidia chinensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
TAIR|locus:2205568323 EFE "ethylene-forming enzyme" 0.996 0.981 0.698 5.7e-123
TAIR|locus:2008905320 AT1G12010 [Arabidopsis thalian 0.977 0.971 0.669 1.6e-116
TAIR|locus:2027099320 ACO2 "ACC oxidase 2" [Arabidop 0.977 0.971 0.653 1.5e-115
TAIR|locus:2050364310 ACO1 "ACC oxidase 1" [Arabidop 0.924 0.948 0.454 1.7e-73
TAIR|locus:2031422307 AT1G77330 [Arabidopsis thalian 0.921 0.954 0.488 3.3e-70
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.874 0.749 0.341 1e-43
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.880 0.821 0.335 2.2e-41
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.902 0.806 0.3 4.6e-41
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.877 0.790 0.313 1.6e-40
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.836 0.743 0.338 3.3e-40
TAIR|locus:2205568 EFE "ethylene-forming enzyme" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1209 (430.6 bits), Expect = 5.7e-123, P = 5.7e-123
 Identities = 225/322 (69%), Positives = 272/322 (84%)

Query:     1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
             ME+FPII+L KLNG+ER+ TME I DACENWGFFE VNHGIS ELLD V+++TKEHY KC
Sbjct:     1 MESFPIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKC 60

Query:    61 MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
             M++RFK+ + ++GL++++SEVND+DWESTF+L+HLPVSN++++PDL+DDYR  MK+FA +
Sbjct:    61 MEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGK 120

Query:   121 LEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
             +EK++                  KKVFYGSK PTFGTKVSNYPPCP PDL+KGLRAHTDA
Sbjct:   121 IEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDA 180

Query:   181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQT 240
             GGIILLFQDD+VSGLQLLKD +WVDVPP+KHSIV+NLGDQLEVITNGKYKSV HRV++QT
Sbjct:   181 GGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQT 240

Query:   241 EGN-RMSIASFYNPGSDAVIYPAPALVEKEAVNSQV--YPKFVFEDYMKLYAGLKFQAKE 297
             +G  RMSIASFYNPGSD+VI+PAP L+ KEA   +   YP+FVFEDYMKLY+ +KFQAKE
Sbjct:   241 DGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAKE 300

Query:   298 PRFEAMKNMETIV--NLGPIAT 317
             PRFEAMK MET V  N+GP+AT
Sbjct:   301 PRFEAMKAMETTVANNVGPLAT 322
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009693 "ethylene biosynthetic process" evidence=ISS;TAS
GO:0071398 "cellular response to fatty acid" evidence=IEP
GO:0009620 "response to fungus" evidence=IEP
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS
TAIR|locus:2008905 AT1G12010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027099 ACO2 "ACC oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050364 ACO1 "ACC oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031422 AT1G77330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65378ACCO3_ARATH1, ., 1, 4, ., 1, 7, ., 40.71740.97790.9718nono
P07920ACCO2_SOLLC1, ., 1, 4, ., 1, 7, ., 40.77670.98110.9873N/Ano
P31237ACCO_ACTDE1, ., 1, 4, ., 1, 7, ., 40.84631.00.9968N/Ano
P31239ACCO_PEA1, ., 1, 4, ., 1, 7, ., 40.78610.99681.0N/Ano
P31238ACCO1_DORSP1, ., 1, 4, ., 1, 7, ., 40.69440.99050.9633N/Ano
Q9ZQZ1ACCO_DENCR1, ., 1, 4, ., 1, 7, ., 40.67300.96540.9654N/Ano
P31528ACCO_DIACA1, ., 1, 4, ., 1, 7, ., 40.74600.98420.9750N/Ano
Q04644ACCO1_CUCME1, ., 1, 4, ., 1, 7, ., 40.74140.99050.9905N/Ano
Q00985ACCO1_MALDO1, ., 1, 4, ., 1, 7, ., 40.77670.98741.0N/Ano
Q9FR99ACCO_MUSAC1, ., 1, 4, ., 1, 7, ., 40.51140.92450.9607N/Ano
Q9MB94ACCO_PRUMU1, ., 1, 4, ., 1, 7, ., 40.80561.00.9968N/Ano
P05116ACCO1_SOLLC1, ., 1, 4, ., 1, 7, ., 40.80560.98740.9968N/Ano
A2Z1W9ACCO1_ORYSI1, ., 1, 4, ., 1, 7, ., 40.71700.95280.9409N/Ano
Q0J1C1ACCO1_ORYSJ1, ., 1, 4, ., 1, 7, ., 40.71380.95280.9409yesno
Q09052ACCO1_BRAJU1, ., 1, 4, ., 1, 7, ., 40.70150.97790.9718N/Ano
Q8S932ACCO_DIOKA1, ., 1, 4, ., 1, 7, ., 40.79551.01.0N/Ano
Q41931ACCO2_ARATH1, ., 1, 4, ., 1, 7, ., 40.70150.97790.9718nono
Q43792ACCO_TOBAC1, ., 1, 4, ., 1, 7, ., 40.79370.99680.9937N/Ano
P19464ACCO_PERAE1, ., 1, 4, ., 1, 7, ., 40.72980.99050.9843N/Ano
Q06588ACCO4_ARATH1, ., 1, 4, ., 1, 7, ., 40.74301.00.9845yesno
Q39705ACCO2_DORSP1, ., 1, 4, ., 1, 7, ., 40.69250.99050.9692N/Ano
O48882ACCO2_MALDO1, ., 1, 4, ., 1, 7, ., 40.78890.96850.9333N/Ano
P24157ACCO4_SOLLC1, ., 1, 4, ., 1, 7, ., 40.79800.97160.9778N/Ano
Q08506ACCO1_PETHY1, ., 1, 4, ., 1, 7, ., 40.80251.00.9968N/Ano
Q08507ACCO3_PETHY1, ., 1, 4, ., 1, 7, ., 40.82181.00.9937N/Ano
Q08508ACCO4_PETHY1, ., 1, 4, ., 1, 7, ., 40.81191.00.9968N/Ano
P54847ACCO3_CUCME1, ., 1, 4, ., 1, 7, ., 40.78860.99370.9875N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.14.11.4LOW CONFIDENCE prediction!
3rd Layer1.14.170.998
4th Layer1.14.11.11LOW CONFIDENCE prediction!
4th Layer1.14.17.40.994

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ACO6
1-aminocyclopropane-1-carboxylate (EC-1.14.11.9) (318 aa)
(Populus trichocarpa)
Predicted Functional Partners:
ACS3
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (467 aa)
     •• 0.902
ACS8
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (449 aa)
     •• 0.902
ACS5
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (446 aa)
     •• 0.902
ACS4
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (468 aa)
     •• 0.902
ACS6
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (440 aa)
     •  0.899
ACS7
1-aminocyclopropane-1-carboxylate (480 aa)
     •  0.899
ACS2
1-aminocyclopropane-1-carboxylate (486 aa)
     •  0.899
ACS1
SubName- Full=Putative uncharacterized protein; (481 aa)
     •  0.899
gw1.III.1157.1
annotation not avaliable (560 aa)
      • 0.687
CHSL4
chs-like protein (388 aa)
      • 0.510

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 0.0
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-129
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 4e-78
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-66
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 8e-64
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 3e-62
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 4e-60
PLN02704335 PLN02704, PLN02704, flavonol synthase 5e-57
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-55
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-52
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-52
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-50
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 8e-50
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 8e-48
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-46
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-45
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-43
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-40
PLN02997325 PLN02997, PLN02997, flavonol synthase 9e-39
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-36
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 5e-36
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 3e-34
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 7e-28
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-27
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-27
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-23
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 5e-18
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-05
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information 
 Score =  664 bits (1715), Expect = 0.0
 Identities = 269/318 (84%), Positives = 301/318 (94%)

Query: 1   MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
           ME+FP+ID+ KLNG+ER+ATME+I DACENWGFFELVNHGISHEL+D V+++TKEHY KC
Sbjct: 4   MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKC 63

Query: 61  MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
           M+QRFK+MVASKGLE VQ+EV DLDWESTFFLRHLP SN+A+IPDL+D+YRK MK+FA+E
Sbjct: 64  MEQRFKEMVASKGLEGVQTEVEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALE 123

Query: 121 LEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
           LEK+AE+LL+LLCENLGLE+GYLKK F+GSKGPTFGTKVSNYPPCPKPDL+KGLRAHTDA
Sbjct: 124 LEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDA 183

Query: 181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQT 240
           GGIILLFQDD+VSGLQLLKD +WVDVPPM+HSIV+NLGDQLEVITNGKYKSV+HRV+AQT
Sbjct: 184 GGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQT 243

Query: 241 EGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRF 300
           +GNRMSIASFYNPGSDAVIYPAPALVEKEA   QVYPKFVFEDYMKLYAGLKFQAKEPRF
Sbjct: 244 DGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRF 303

Query: 301 EAMKNMETIVNLGPIATV 318
           EAMK MET VNL PIAT 
Sbjct: 304 EAMKAMETTVNLNPIATA 321

Length = 321
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 318
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02997325 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02904357 oxidoreductase 100.0
PLN02485329 oxidoreductase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.87
PLN03176120 flavanone-3-hydroxylase; Provisional 99.74
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.75
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.26
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.63
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.24
TIGR02466201 conserved hypothetical protein. This family consis 84.36
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 81.77
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 80.52
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-82  Score=586.90  Aligned_cols=317  Identities=85%  Similarity=1.376  Sum_probs=288.0

Q ss_pred             CCCCCeeeCCCCCCCCHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhHhhhcCCCccccccc
Q 021002            1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE   80 (318)
Q Consensus         1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~G~~~~~~~   80 (318)
                      |++||+|||+.+.+.++.+++++|.+||++||||||+|||||.++++++++++++||+||.|+|++.....+||.++..+
T Consensus         4 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~gy~~~~~~   83 (321)
T PLN02299          4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVASKGLEGVQTE   83 (321)
T ss_pred             CCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccCCCCccccccc
Confidence            57899999999876667788999999999999999999999999999999999999999999999876667899877666


Q ss_pred             ccCCCcccccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHhhcCCCCCcccceec
Q 021002           81 VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVS  160 (318)
Q Consensus        81 ~~~~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~  160 (318)
                      ....||+|.|.+...|..+.+.||+.+++||+.+++|+++|.+++.+||++|+++||+++++|.+.+.....+.+.+|++
T Consensus        84 ~~~~d~ke~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~  163 (321)
T PLN02299         84 VEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVS  163 (321)
T ss_pred             CCCcCHHHHcccccCCccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeeeE
Confidence            56679999998766665567889998899999999999999999999999999999999999988775433345679999


Q ss_pred             ccCCCCCCCCCCCcccccCCCceeEEEecCCCCeeEEeeCCceEEcCCCCCeEEEEcchHhHHHhcCccccccceeecCC
Q 021002          161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQT  240 (318)
Q Consensus       161 ~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~~vVnvGD~l~~~TnG~~ks~~HRVv~~~  240 (318)
                      |||||+.++...|+++|||+|+||||+|++.++||||+++|+|++|+|.||++||||||+||+||||+|||++|||+.++
T Consensus       164 ~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~  243 (321)
T PLN02299        164 NYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQT  243 (321)
T ss_pred             ecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCC
Confidence            99999988878899999999999999997569999999899999999999999999999999999999999999999888


Q ss_pred             CCCceeEEEeecCCCCceEecCccccccccCCCCCCCCccHHHHHHHHHcccCCCCchhhhhhhhhhhhhhcCCccC
Q 021002          241 EGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT  317 (318)
Q Consensus       241 ~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (318)
                      ..+|||++||++|+.|++|+|+|+|++++.++|++|+|++++||++.+..+...++...++.++++++-.+..||+|
T Consensus       244 ~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (321)
T PLN02299        244 DGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMETTVNLNPIAT  320 (321)
T ss_pred             CCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccchhhhhhccccccccCccCC
Confidence            78999999999999999999999999865445799999999999999998888887667999999999999999987

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-136
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-31
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-31
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 8e-30
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-08
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 3e-07
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 5e-04
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 5e-04
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  481 bits (1238), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/318 (72%), Positives = 259/318 (81%), Gaps = 1/318 (0%)
Query: 2   ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCM 61
           ENFPII L K+NG ER+AT E I DACENWGFFELVNHGI  E+ DTV++ TK HY KC 
Sbjct: 2   ENFPIISLDKVNGVERAATXEXIKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKKCX 61
Query: 62  DQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVEL 121
           +QRFK++VASK LE VQ+EV D DWESTFFL+HLP+SN++E+PDL+++YR+  ++FA  L
Sbjct: 62  EQRFKELVASKALEGVQAEVTDXDWESTFFLKHLPISNISEVPDLDEEYREVXRDFAKRL 121
Query: 122 EKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAG 181
           EK+A                  K  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAG
Sbjct: 122 EKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAG 181
Query: 182 GIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTE 241
           GIILLFQDD+VSGLQLLKD QW+DVPP +HSIV+NLGDQLEVITNGKYKSV HRVIAQ +
Sbjct: 182 GIILLFQDDKVSGLQLLKDGQWIDVPPXRHSIVVNLGDQLEVITNGKYKSVXHRVIAQKD 241
Query: 242 GNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRF 300
           G R S+ASFYNPGSDAVIYPAPALVEKEA  N QVYPKFVF+DY KLYAGLKFQAKEPRF
Sbjct: 242 GARXSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYXKLYAGLKFQAKEPRF 301
Query: 301 EAMKNMETIVNLGPIATV 318
           EA K  ET V   PIATV
Sbjct: 302 EAXKAXETDVKXDPIATV 319
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 0.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-146
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-74
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 8e-71
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-65
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 4e-65
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  506 bits (1305), Expect = 0.0
 Identities = 256/319 (80%), Positives = 292/319 (91%), Gaps = 1/319 (0%)

Query: 1   MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
           MENFPII L K+NG ER+ATMEMI DACENWGFFELVNHGI  E++DTV+++TK HY KC
Sbjct: 1   MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKC 60

Query: 61  MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVE 120
           M+QRFK++VASK LE VQ+EV D+DWESTFFL+HLP+SN++E+PDL+++YR+ M++FA  
Sbjct: 61  MEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKR 120

Query: 121 LEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180
           LEK+AE+LL+LLCENLGLE+GYLK  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDA
Sbjct: 121 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180

Query: 181 GGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQT 240
           GGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQ 
Sbjct: 181 GGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK 240

Query: 241 EGNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKLYAGLKFQAKEPR 299
           +G RMS+ASFYNPGSDAVIYPAPALVEKEA  N QVYPKFVF+DYMKLYAGLKFQAKEPR
Sbjct: 241 DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPR 300

Query: 300 FEAMKNMETIVNLGPIATV 318
           FEAMK MET V + PIATV
Sbjct: 301 FEAMKAMETDVKMDPIATV 319
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 95.5
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.11
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.86
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 91.91
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 90.53
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 85.08
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 80.08
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 80.06
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
Probab=100.00  E-value=2.2e-85  Score=605.39  Aligned_cols=318  Identities=81%  Similarity=1.332  Sum_probs=275.6

Q ss_pred             CCCCCeeeCCCCCCCCHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhHhhhcCCCccccccc
Q 021002            1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE   80 (318)
Q Consensus         1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~G~~~~~~~   80 (318)
                      |++||||||+.+.+.++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|++.....+||.+++.+
T Consensus         1 m~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e   80 (319)
T 1w9y_A            1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAE   80 (319)
T ss_dssp             -CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCccccc
Confidence            78999999999865568889999999999999999999999999999999999999999999999865555688877666


Q ss_pred             ccCCCcccccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHhhcCCCCCcccceec
Q 021002           81 VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVS  160 (318)
Q Consensus        81 ~~~~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~  160 (318)
                      .+..||+|.|++...|....|.||+.+++||+.+++|+++|.+++.+||++|+++||+++++|.+.+....++.+.+|++
T Consensus        81 ~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~  160 (319)
T 1w9y_A           81 VTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVS  160 (319)
T ss_dssp             GGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEE
T ss_pred             CCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEE
Confidence            67889999998876666567889998999999999999999999999999999999999999999886432345679999


Q ss_pred             ccCCCCCCCCCCCcccccCCCceeEEEecCCCCeeEEeeCCceEEcCCCCCeEEEEcchHhHHHhcCccccccceeecCC
Q 021002          161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQT  240 (318)
Q Consensus       161 ~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~~vVnvGD~l~~~TnG~~ks~~HRVv~~~  240 (318)
                      |||||+.++...|+++|||+|+||||+||+.++||||+++|+|++|+|.||++||||||+||+||||+||||+|||++++
T Consensus       161 ~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~  240 (319)
T 1w9y_A          161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK  240 (319)
T ss_dssp             ECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS
T ss_pred             ecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCC
Confidence            99999998888999999999999999996569999999999999999999999999999999999999999999999988


Q ss_pred             CCCceeEEEeecCCCCceEecCccccccccC-CCCCCCCccHHHHHHHHHcccCCCCchhhhhhhhhhhhhhcCCccCC
Q 021002          241 EGNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV  318 (318)
Q Consensus       241 ~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~-~~~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (318)
                      +.+|||++||++|+.|++|+|+|+|++++.. +|++|+++||+||++.++.+++.++..+++.+|+.++....+||||+
T Consensus       241 ~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (319)
T 1w9y_A          241 DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV  319 (319)
T ss_dssp             SSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC------------
T ss_pred             CCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHHhhhcccCCcccC
Confidence            8899999999999999999999999986411 37899999999999999999998887779999999999999999996
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 318
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-107
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-65
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-52
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-45
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  312 bits (799), Expect = e-107
 Identities = 248/307 (80%), Positives = 283/307 (92%), Gaps = 1/307 (0%)

Query: 2   ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCM 61
           ENFPII L K+NG ER+ATMEMI DACENWGFFELVNHGI  E++DTV+++TK HY KCM
Sbjct: 1   ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCM 60

Query: 62  DQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVEL 121
           +QRFK++VASK LE VQ+EV D+DWESTFFL+HLP+SN++E+PDL+++YR+ M++FA  L
Sbjct: 61  EQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRL 120

Query: 122 EKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAG 181
           EK+AE+LL+LLCENLGLE+GYLK  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAG
Sbjct: 121 EKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAG 180

Query: 182 GIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTE 241
           GIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQ +
Sbjct: 181 GIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD 240

Query: 242 GNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKLYAGLKFQAKEPRF 300
           G RMS+ASFYNPGSDAVIYPAPALVEKEA  N QVYPKFVF+DYMKLYAGLKFQAKEPRF
Sbjct: 241 GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRF 300

Query: 301 EAMKNME 307
           EAMK ME
Sbjct: 301 EAMKAME 307
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.22
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=3.7e-80  Score=567.36  Aligned_cols=305  Identities=81%  Similarity=1.349  Sum_probs=275.2

Q ss_pred             CCCCeeeCCCCCCCCHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhHhhhcCCCcccccccc
Q 021002            2 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEV   81 (318)
Q Consensus         2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~G~~~~~~~~   81 (318)
                      ++||||||+.+++.++++++++|.+||+++|||||+|||||.++++++++++++||++|.|+|+++.....+|.++..+.
T Consensus         1 ~~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~   80 (307)
T d1w9ya1           1 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV   80 (307)
T ss_dssp             CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred             CCCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCccccc
Confidence            47999999999888899999999999999999999999999999999999999999999999998765555555555566


Q ss_pred             cCCCcccccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHhhcCCCCCcccceecc
Q 021002           82 NDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSN  161 (318)
Q Consensus        82 ~~~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~~  161 (318)
                      ...||+|.|++...+..+.+.||+.+++|++.+++|++.|.+|+++|+++|+++||+++++|.+.+....++.+.+|++|
T Consensus        81 ~~~d~~e~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr~~~  160 (307)
T d1w9ya1          81 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN  160 (307)
T ss_dssp             GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred             cccChhhhcccccccccCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccccccccceecC
Confidence            67899999988766666678899999999999999999999999999999999999999999998865555667899999


Q ss_pred             cCCCCCCCCCCCcccccCCCceeEEEecCCCCeeEEeeCCceEEcCCCCCeEEEEcchHhHHHhcCccccccceeecCCC
Q 021002          162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTE  241 (318)
Q Consensus       162 Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~~vVnvGD~l~~~TnG~~ks~~HRVv~~~~  241 (318)
                      |||++.++...|+++|||+|+||||+|++.++||||.++|+|++|+|.+|++|||+||+||+||||+||||+|||+.+++
T Consensus       161 YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~~  240 (307)
T d1w9ya1         161 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD  240 (307)
T ss_dssp             CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSS
T ss_pred             CCCCcccccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCceeecCCC
Confidence            99999988888999999999999999987789999999999999999999999999999999999999999999999888


Q ss_pred             CCceeEEEeecCCCCceEecCccccccc-cCCCCCCCCccHHHHHHHHHcccCCCCchhhhhhhhh
Q 021002          242 GNRMSIASFYNPGSDAVIYPAPALVEKE-AVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNM  306 (318)
Q Consensus       242 ~~R~Si~~F~~p~~d~~i~p~~~~~~~~-~~~~~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~  306 (318)
                      .+||||+||++|+.|++|+|+|+|++.. ..+|++|+|||++||++.+++.+++.|+++++++|..
T Consensus       241 ~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~  306 (307)
T d1w9ya1         241 GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM  306 (307)
T ss_dssp             SCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred             CCcEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCCcccHHHHHhhcc
Confidence            8999999999999999999999999743 2368999999999999999999999998889998853
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure