Citrus Sinensis ID: 021064

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLAVCISCTFPSDCIVLYIFTKSIIIYHRMNAGPKQVCCCCCPGCWRW
ccccccHHHHHHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHcccEEEEEccHHHHHHHHHHcHHHHcccccccccccccccEEEEEEcccHHHHHHHHHHcccccccccccccccCEEEccccccccccccHHHHHccccCEECccEEEEEccEEEEEccccccHHHHHHHHHHccccEEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccc
**********KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLAVCISCTFPSDCIVLYIFTKSIIIYHRMNAGPKQVCCCCCPGCWRW
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MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLAVCISCTFPSDCIVLYIFTKSIIIYHRMNAGPKQVCCCCCPGCWRW

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
60S acidic ribosomal protein P0-2 Ribosomal protein P0 is the functional equivalent of E.coli protein L10.confidentQ42112
60S acidic ribosomal protein P0 Ribosomal protein P0 is the functional equivalent of E.coli protein L10.confidentP50346
60S acidic ribosomal protein P0-3 Ribosomal protein P0 is the functional equivalent of E.coli protein L10.confidentP57691

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZKR, chain g
Confidence level:very confident
Coverage over the Query: 264-277
View the alignment between query and template
View the model in PyMOL