Citrus Sinensis ID: 021090

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
Protein Sequence
MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVATDPAVKFENNLIDLNLPAPLEEDDFSVVSDA
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEcccccccccHHHccccccccccccccccccccccccEEccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcc
Coil and Loop (DISEMBL)
mekhkcklctrsfsngralgghmkahlaahplppktnqqqqpsdstesastsssssgegvevkgkspevaeekslgyglrnnpkksfrfadpefsfavdsgsvvvqdresetesrnptrrrskRNRKLFTAHQDHHQkrmlkkpnflespaepepvssvsdtspeEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIkltrgkyrcEKCKKAFRSYhalgghkkVCETNInagtkvaadekifecpfcykvfgsgqalgghkrshllansSSTAAAAAVVatdpavkfennlidlnlpapleeddfsvvsda
Flexible Loop (DISEMBL)
MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTEsastsssssgegvevkgkspevaeekslgyglrnnpKKSFRFADPefsfavdsgsvvvqdresetesrnptrrrskrnrklftahqdhhqkrmlkkpnflespaepepvssvsdtspEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVeeseeikltrgkyrcEKCKKAFRsyhalgghkkVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVATDPAVKFENNLIdlnlpapleeddfsvvsda
Low Complexity Region (SEG)
MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPsdstesastsssssgegvevkgksPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETEsrnptrrrskrnrkLFTAHQDHHQKRMLKKPNFLespaepepvssvsDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANssstaaaaavvatDPAVKFENNLIDLNLPAPLEEDDFSVVSDA
Disordered region (IsUnstruct)
***********************************************************************************************************************************************************************VAMCLMMLSRDVWMRNN******KIVEMVE*SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL******AAAAAVVATDPAVKFENNLIDLNL***************
Disordered Region (DISOPRED)
*EKHKCKLCTRSFSNGRALGGHM*********************************************************************************************************************************************************************************************************************************ECPFCYKVFGSGQALGGHK*******************************DLNLPAPLEEDDF*VV***
Disordered Region (DISEMBL)
MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLP***************************************KSLGYGLRNNPKKSFRFADPEFSFAVDS************************NRKLF***********LKKPNFL*****************EEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN********AVVATDPAVKFENNLIDLNLPAPLEEDDFSVVSDA
Disordered Region (DISPRO)
**KHKCKLCTRSFSNGRAL********************************************************GYGLRNNPKKSFRFADPEFSFAVD***************************************************************SPEEDVAMCLMMLSRD***************************RGKYRCEKCKKAFRSYHALGGH*******************IFECPFCYKVFGSGQAL**********************************IDLNLPAPLEEDDFSVVS**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVATDPAVKFENNLIDLNLPAPLEEDDFSVVSDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	317	2.2.26 [Sep-21-2011]
Q9M202	288	Zinc finger protein ZAT9	yes	no	0.826	0.909	0.399	1e-42
Q39092	267	Zinc finger protein ZAT1	no	no	0.744	0.883	0.366	1e-39
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.927	0.936	0.389	1e-38
Q9SSW2	273	Zinc finger protein AZF2	no	no	0.435	0.505	0.366	2e-14
Q681X4	286	Zinc finger protein ZAT5	no	no	0.454	0.503	0.303	2e-12
Q9SSW1	245	Zinc finger protein AZF1	no	no	0.315	0.408	0.316	1e-11
Q96289	227	Zinc finger protein ZAT10	no	no	0.416	0.581	0.321	2e-11
O22533	238	Zinc finger protein ZAT6	no	no	0.451	0.600	0.287	4e-10
Q9SSW0	193	Zinc finger protein AZF3	no	no	0.511	0.839	0.276	2e-09
Q9SLD4	178	Zinc finger protein ZAT11	no	no	0.403	0.719	0.270	7e-09

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/338 (39%), Positives = 182/338 (53%), Gaps = 76/338 (22%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLA-AHPLPPKTNQQQQPSD-STESASTSSSSSGE 58
           ME +KC++C +SF NG+ALGGHM++H++ +H       ++Q+PS  S E+ S  SSS   
Sbjct: 1   MESYKCRVCFKSFVNGKALGGHMRSHMSNSHE------EEQRPSQLSYETESDVSSS--- 51

Query: 59  GVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESR--- 115
                                           DP+F+F   + SV+++D ESE+ES    
Sbjct: 52  --------------------------------DPKFAF---TSSVLLEDGESESESSRNV 76

Query: 116 -NPTRRRSKRNRKLFT-AHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLM 173
            N TR+RSKR RKL +   +     ++  KP   ES  EP P SS SDT+ EED+A CLM
Sbjct: 77  INLTRKRSKRTRKLDSFVTKKVKTSQLGYKP---ESDQEP-PHSSASDTTTEEDLAFCLM 132

Query: 174 MLSRDVWMRNNDEAQDHKIVEMVEESEEIK-----LTRGKYRCEKCKKAFRSYHALGGHK 228
           MLSRD W +N    +  + +E  EESE         T+G+Y+CE C K F+SY ALGGH+
Sbjct: 133 MLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGKVFKSYQALGGHR 192

Query: 229 KVCETNINAGTK------------VAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSS 276
              + N  +  K            V   ++I ECP C +VF SGQALGGHKRSH + N S
Sbjct: 193 ASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRVFASGQALGGHKRSHGVGNLS 252

Query: 277 STAAAAAVVATDPAVKFENNLIDLNLPAPLEEDDFSVV 314
                   V  + +VK    +IDLNLPAP EED+ SVV
Sbjct: 253 VNQQRR--VHRNESVK--QRMIDLNLPAPTEEDEVSVV 286

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 164/336 (48%), Gaps = 100/336 (29%)

Query: 2   EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVE 61
           E+HKCKLC +SF+NGRALGGHM++H+  HPLP       QP    ES S+S         
Sbjct: 3   ERHKCKLCWKSFANGRALGGHMRSHMLIHPLP------SQP----ESYSSS--------- 43

Query: 62  VKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETES-RNPTRR 120
                                       ADP F         V+QDRESETES + P+R+
Sbjct: 44  ---------------------------MADPGF---------VLQDRESETESSKKPSRK 67

Query: 121 RSKRNRKLFTA--HQDHHQKRM----------LKKPNFLESPAEPEPVSSVSDT-SPEED 167
           RS+ NR+  ++  HQ  +++            +      ES  E EP+SSVSD  + EED
Sbjct: 68  RSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMSSVSDAATTEED 127

Query: 168 VAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKY-RCEKCKKAFRSYHALGG 226
           VA+ LM+LS              +  E   + E  K  R K+  CE C+K F+SY ALGG
Sbjct: 128 VALSLMLLS----------RDKWEKEEEESDEERWKKKRNKWFECETCEKVFKSYQALGG 177

Query: 227 HKKVCETNINAGTKVAADEKI----------FECPFCYKVFGSGQALGGHKRSHLLANSS 276
           H+   +  I    ++ +DE             ECP C KVF SGQALGGHKRSH  AN+ 
Sbjct: 178 HRASHKKKIAETDQLGSDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSHASANNE 237

Query: 277 STAAAAAVVATDPAVKFENNLIDLNLPAPLEEDDFS 312
            T  +  +++          LIDLNLPAP EE++ +
Sbjct: 238 FTRRSGIIIS----------LIDLNLPAPSEEEEMA 263

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score =  160 bits (405), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 177/334 (52%), Gaps = 40/334 (11%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           ME++KC+ C +SF NGRALGGHM++H+                    +            
Sbjct: 1   MERYKCRFCFKSFINGRALGGHMRSHMLT----------LSAERCVITGEAEEEVEERPS 50

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESR--NPT 118
           ++     +   + S   G  +N K +    + EF FA D       D ESETES   NPT
Sbjct: 51  QLCDDDDDTESDASSSSGEFDNQKMNRLDDELEFDFAEDD------DVESETESSRINPT 104

Query: 119 RRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRD 178
           RRRSKR RKL +   D  +K    +P+  E  AEPE  SS SDT+ EED+A CL+MLSRD
Sbjct: 105 RRRSKRTRKLGSFDFDF-EKLTTSQPS--ELVAEPEHHSSASDTTTEEDLAFCLIMLSRD 161

Query: 179 VWMRNNDEAQDHKIVEMVEESEEIK--LTRGKYRCEKCKKAFRSYHALGGHK------KV 230
            W +   + Q  +  E   +SE+ K   +RG+++CE C K F+SY ALGGH+      K 
Sbjct: 162 KWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKA 221

Query: 231 C-------ETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL-ANSSSTAAAA 282
           C       ET    G K   ++K+ ECP C++VF SGQALGGHKRSH     +    + +
Sbjct: 222 CMTKTEQVETEYVLGVK---EKKVHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVS 278

Query: 283 AVVATDPAVKFENNLIDLNLPAPLEEDDFSVVSD 316
            +V  +  V  +  +IDLNLPAP EED+ S+V D
Sbjct: 279 QIVQIEEEVSVKQRMIDLNLPAPNEEDETSLVFD 312

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW2|AZF2_ARATH Zinc finger protein AZF2 OS=Arabidopsis thaliana GN=AZF2 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 84/172 (48%), Gaps = 34/172 (19%)

Query: 161 DTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRS 220
           D + EE +A+CL+ML++D   +     Q   +     ES+ +      Y+C  C+KAF S
Sbjct: 64  DLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTP-PPESKNLP-----YKCNVCEKAFPS 117

Query: 221 YHALGGHK--------KVCET----------NINAGTK--VAADEKIFECPFCYKVFGSG 260
           Y ALGGHK         V  T          +I AG K  +AA  KI EC  C+KVF +G
Sbjct: 118 YQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPTG 177

Query: 261 QALGGHKRSHL--------LANSSSTAAAAAVVATDPAVKFENNLIDLNLPA 304
           QALGGHKR H            S S + + +V +T    +     IDLNLPA
Sbjct: 178 QALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHRGFIDLNLPA 229

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. May act as a positive regulator of leaf senescence. Has been identified as a suppressor of the deficiency of yeast snf4 mutant to grow on non-fermentable carbon source.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 82/201 (40%), Gaps = 57/201 (28%)

Query: 162 TSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVE-ESEEIKLTRGKYRCEKCKKAFRS 220
           T  EED+A+CL+ML+R   + + D     KI + +  E+    +    Y C+ C + F S
Sbjct: 71  TQEEEDMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYV----YECKTCNRTFSS 126

Query: 221 YHALGGHK-----------------------KVCETNINAGTKVAAD------------- 244
           + ALGGH+                          E   N+  KV+               
Sbjct: 127 FQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKA 186

Query: 245 EKIFECPFCYKVFGSGQALGGHKRSHLLANS--SSTAAAAAVVATDPAVKFENNL----- 297
            K+ EC  C   F SGQALGGH R H  A +  S  AA A V       + E N+     
Sbjct: 187 NKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSME 246

Query: 298 -------IDLNLPAPLEEDDF 311
                  +DLNLPAP  EDD 
Sbjct: 247 QQRKYLPLDLNLPAP--EDDL 265

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 36/136 (26%)

Query: 163 SPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYH 222
           S EE +A+CL+ML+R   +++             +  +        Y+C  C K+F SY 
Sbjct: 59  SEEEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRD--------YKCTVCGKSFSSYQ 110

Query: 223 ALGGHKK----------------------------VCETNINAGTKVAADEKIFECPFCY 254
           ALGGHK                             V    +N G  V+   KI  C  C+
Sbjct: 111 ALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICF 170

Query: 255 KVFGSGQALGGHKRSH 270
           K F SGQALGGHKR H
Sbjct: 171 KSFASGQALGGHKRCH 186

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q96289|ZAT10_ARATH Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 39/171 (22%)

Query: 165 EEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHAL 224
           EE +A CLM+L+RD     N +      VE +            Y+C  C K F SY AL
Sbjct: 52  EEYLAFCLMLLARD-----NRQPPPPPAVEKLS-----------YKCSVCDKTFSSYQAL 95

Query: 225 GGHKKVCETNINAGTKVAADE-----------------KIFECPFCYKVFGSGQALGGHK 267
           GGHK     N++       D+                 K   C  C K F SGQALGGHK
Sbjct: 96  GGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHK 155

Query: 268 RSHLLAN---SSSTAAAAAVVATDPAVKFENNLIDLNLPAPLEEDDFSVVS 315
           R H   N   ++S+ + +    +   V   +   DLN+P P+ E  FS+V+
Sbjct: 156 RCHYEGNNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIP-PIPE--FSMVN 203

Transcriptional repressor involved in abiotic stress responses. Can repress the stress responsive genes DREB1A and LTI78. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade.

Arabidopsis thaliana (taxid: 3702)

>sp|O22533|ZAT6_ARATH Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 31/174 (17%)

Query: 165 EEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHAL 224
           +E +A+CLM+L+RD     + +         +       +    Y+C  C KAF SY AL
Sbjct: 49  DEYIALCLMLLARDGDRNRDLDLPSSSSSPPLLPPLPTPI----YKCSVCDKAFSSYQAL 104

Query: 225 GGHKKVCETNINAGTKVAADE--------------------KIFECPFCYKVFGSGQALG 264
           GGHK     + +       DE                    K   C  C+K F +GQALG
Sbjct: 105 GGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALG 164

Query: 265 GHKRSHLLANSSSTAAAAAV----VATDPAVKFENNLIDLNLPAPLEEDDFSVV 314
           GHKR H    +    +++      V +   V   +   DLN+P P+ E  FS+V
Sbjct: 165 GHKRCHYEGKNGGGVSSSVSNSEDVGSTSHVSSGHRGFDLNIP-PIPE--FSMV 215

Probable transcription factor that regulates root development and phosphate (Pi) acquisition and homeostasis. Probably acts as a repressor of primary root growth and regulates Pi homeostasis through the control of root architecture.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW0|AZF3_ARATH Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 51/213 (23%)

Query: 104 VVQD--RESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSD 161
           +V+D  R +  E     ++RSKR+R        HH  R+                     
Sbjct: 11  LVEDPLRFNGVEQWTKCKKRSKRSRSDL-----HHNHRL--------------------- 44

Query: 162 TSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSY 221
            + EE +A CLM+L+RD          D   V + E+          Y+C  C K F SY
Sbjct: 45  -TEEEYLAFCLMLLARD--------GGDLDSVTVAEKPS--------YKCGVCYKTFSSY 87

Query: 222 HALGGHKKVCETNINAG----TKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSS 277
            ALGGHK    +    G    +  +   K   C  C K F +GQALGGHKR H     S+
Sbjct: 88  QALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGGVSN 147

Query: 278 TAAAAAVVATDPAVK--FENNLIDLNLPAPLEE 308
           +    +      +    F+ N+I +   +P +E
Sbjct: 148 SEGVGSTSHVSSSSHRGFDLNIIPVQGFSPDDE 180

Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 31/159 (19%)

Query: 167 DVAMCLMMLSRDVWMRN---NDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHA 223
           D+A CLM+L++   ++    N   + H              T  ++ C+ C K F S+ A
Sbjct: 16  DIAKCLMILAQTSMVKQIGLNQHTESH--------------TSNQFECKTCNKRFSSFQA 61

Query: 224 LGGHK--------KVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS 275
           LGGH+         V + ++   +         +C  C + FG+GQALGGH R H  + +
Sbjct: 62  LGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMT 121

Query: 276 SSTAAAAAVVATDPAVKFENN-----LIDLNLPAPLEED 309
              +  + ++ + P +K   +      +DLNL  PLE D
Sbjct: 122 VEPSFISPMIPSMPVLKRCGSSKRILSLDLNL-TPLEND 159

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
224138600	315	predicted protein [Populus trichocarpa]	0.927	0.933	0.603	3e-95
225453529	359	PREDICTED: zinc finger protein ZAT9-like	0.968	0.855	0.515	1e-77
357476837	315	hypothetical protein MTR_4g100860 [Medic	0.930	0.936	0.528	2e-77
224074157	265	predicted protein [Populus trichocarpa]	0.794	0.950	0.548	5e-77
217072552	316	unknown [Medicago truncatula]	0.933	0.936	0.507	8e-73
147773504	829	hypothetical protein VITISV_013510 [Viti	0.917	0.351	0.563	1e-72
359495992	323	PREDICTED: zinc finger protein ZAT4-like	0.921	0.904	0.561	9e-72
356540524	288	PREDICTED: zinc finger protein ZAT9-like	0.861	0.947	0.527	2e-68
356497137	298	PREDICTED: zinc finger protein ZAT9-like	0.880	0.936	0.550	6e-68
356514316	265	PREDICTED: zinc finger protein ZAT9-like	0.813	0.973	0.506	3e-67

>gi|224138600|ref|XP_002326643.1| predicted protein [Populus trichocarpa] gi|222833965|gb|EEE72442.1| predicted protein [Populus trichocarpa]

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 204/338 (60%), Positives = 239/338 (70%), Gaps = 44/338 (13%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           ME+HKCKLC R+F NGRALGGHMKAHLAA      T QQ    D  E          E +
Sbjct: 1   MERHKCKLCVRTFPNGRALGGHMKAHLAA------TRQQLGGLDLQEEQ--------EII 46

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRR 120
           ++K    E  EEKSL YGLR NPKKS R ADPEFSFAVD+GSVVVQDRESETESRNPTRR
Sbjct: 47  KIK----EAVEEKSLAYGLRENPKKSCRLADPEFSFAVDTGSVVVQDRESETESRNPTRR 102

Query: 121 RSKRNRKLF----TAHQDHHQKRML--KKPNFLE--SPAEPEPVSSVSDTSPEEDVAMCL 172
           RSKR RK      +  QD   K+++  K P++ E  SPAEPEPVSSVSDTSPEEDVA CL
Sbjct: 103 RSKRIRKSCGFGESQKQDFDVKKVVDFKNPSWGESSSPAEPEPVSSVSDTSPEEDVARCL 162

Query: 173 MMLSRDVWMRNNDE-------AQDHKIVEMVEESEEIKL--TRGKYRCEKCKKAFRSYHA 223
           MMLSRDVWMRN++E           K V+M+EE+EEIK+   RGK+RCEKC K FRS  A
Sbjct: 163 MMLSRDVWMRNDEEEVQEQGGKDGEKSVDMLEEAEEIKVNKIRGKFRCEKCMKLFRSSRA 222

Query: 224 LGGHKKVCETNINAGTKVA----ADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTA 279
           L GHK++C  N      +A    A+++IFECP+C +VFGSGQALGGHKRSHL+ +S+ST 
Sbjct: 223 LSGHKRICSLNATEARNIAAAGDANDRIFECPYCLRVFGSGQALGGHKRSHLIGSSTSTN 282

Query: 280 AAAAVVATDPAVKFENNLIDLNLPAPLEEDDFSVVSDA 317
           A A V     + K ENN+IDLNLPAP+E+D+FSVVSDA
Sbjct: 283 AVAEV-----STKLENNMIDLNLPAPVEDDEFSVVSDA 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453529|ref|XP_002278670.1| PREDICTED: zinc finger protein ZAT9-like isoform 1 [Vitis vinifera]

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 186/361 (51%), Positives = 226/361 (62%), Gaps = 54/361 (14%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           MEKHKCKLC RSFSNGRALGGHM++H+   P+PPK  Q  Q  D    +++SSSSS E  
Sbjct: 1   MEKHKCKLCFRSFSNGRALGGHMRSHMLNLPIPPKQEQPSQIGDDETESASSSSSSEEEG 60

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETE-SRNPTR 119
           E KG          LGY LR NPKKS R ADPEFSFAVD+ SVV+QDRESETE S+NPTR
Sbjct: 61  EDKG----------LGYELRENPKKSIRLADPEFSFAVDAASVVLQDRESETESSKNPTR 110

Query: 120 RRSKRNRKLFTAH--QDHHQKRM-LKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLS 176
           RRSKRNRKL  A   + H QK++ L K +  ES A+PEPVSS+SD + EEDVA CLMMLS
Sbjct: 111 RRSKRNRKLGLADPPRFHEQKKIKLDKLSKTESWADPEPVSSISDATTEEDVAFCLMMLS 170

Query: 177 RDVWMRNNDEAQ-----------------DHKIVEMVEESEEIKL----TRGKYRCEKCK 215
           RD W+   +  +                 + + V+  ++S+E+KL     RGKY+CE C 
Sbjct: 171 RDKWIEEQENQERRHDEEDEEEAEAEAEEEERFVDETDDSDELKLFKTRARGKYKCETCN 230

Query: 216 KAFRSYHALGGHK------KVC----ETNI---NAGTKVAADEKIFECPFCYKVFGSGQA 262
           K FRSY ALGGH+      K C    E      NA     AD KI ECP C++ F SGQA
Sbjct: 231 KVFRSYQALGGHRASHKKIKACAPIKEVEFEPENASNPCLADAKIHECPVCFRKFTSGQA 290

Query: 263 LGGHKRSHLLANSSSTAAAAAVVATDPA-VKFENNLIDLNLPAPLEEDDF-----SVVSD 316
           LGGHKRSH+  ++++ AA A       A  K  +++IDLNLPAP+EEDD      S VSD
Sbjct: 291 LGGHKRSHISGSAAAAAAPAPPPPPRKASSKVGDSMIDLNLPAPIEEDDISQIEHSAVSD 350

Query: 317 A 317
           A
Sbjct: 351 A 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476837|ref|XP_003608704.1| hypothetical protein MTR_4g100860 [Medicago truncatula] gi|355509759|gb|AES90901.1| hypothetical protein MTR_4g100860 [Medicago truncatula]

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 222/337 (65%), Gaps = 42/337 (12%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQ--QPSDSTESASTSSSSSGE 58
           ME+HKCKLC+R+F NGRALGGHMKAHLA      K+ Q+Q  QP   + S S        
Sbjct: 1   MERHKCKLCSRTFGNGRALGGHMKAHLAI----AKSQQKQFTQPGSFSSSESEEDEEE-- 54

Query: 59  GVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRN-P 117
                       E+  + Y LR NPKKS + ADPEFSF  ++ SV+VQDRESETES+N P
Sbjct: 55  -----------EEKALINYVLRENPKKSLKVADPEFSFVRETESVIVQDRESETESKNNP 103

Query: 118 TRR-RSKRNRKLFTAHQDHHQKRMLKK---PNFL--ESPA---EPEPVSSVSDTSPEEDV 168
           TR+ RSKRNRK    + ++HQ  + +K   P+F+   +P+   E EPVSSVSDTSPEEDV
Sbjct: 104 TRQQRSKRNRK--QNNDNNHQNFLPQKKPKPSFMVPTTPSQFTEQEPVSSVSDTSPEEDV 161

Query: 169 AMCLMMLSRDVWMR------NNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYH 222
           AMCLMMLSRD W R      N ++ +D   VE + + + +K  RGK+ CE C K FRS  
Sbjct: 162 AMCLMMLSRDKWSRKMNNVNNVEQEEDEGSVEKISKVKLLKRVRGKHLCENCGKTFRSSR 221

Query: 223 ALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAA 282
           ALG H+ +C  +  A      D+KIFECPFC+KVFGSGQALGGHKRSHL+  SSST+ A 
Sbjct: 222 ALGSHRSICCRD-EAKNGNGNDDKIFECPFCFKVFGSGQALGGHKRSHLMIPSSSTSTAN 280

Query: 283 AVVATDP-AVKFENNLIDLNLPAPL-EEDDFSVVSDA 317
             V  +P A +F+++ IDLN+PAPL EEDD SVVSDA
Sbjct: 281 --VNVNPTAARFKDSFIDLNMPAPLEEEDDLSVVSDA 315

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074157|ref|XP_002304278.1| predicted protein [Populus trichocarpa] gi|222841710|gb|EEE79257.1| predicted protein [Populus trichocarpa]

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 181/330 (54%), Positives = 211/330 (63%), Gaps = 78/330 (23%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           ME+HKCKLC R+F NGRALGGHMKAHLAA      T QQ    D  ES S+S SSS    
Sbjct: 1   MERHKCKLCVRTFPNGRALGGHMKAHLAA------TRQQLGGLDRNESFSSSYSSS---- 50

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRR 120
                                        +DPEFSF VD+GSVVVQDRESETESRNPTRR
Sbjct: 51  -----------------------------SDPEFSFTVDAGSVVVQDRESETESRNPTRR 81

Query: 121 RSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDVW 180
           RSKR RK                     S AEPEPVSSVSDTSPEEDVA CLMMLSRDVW
Sbjct: 82  RSKRIRK---------------------SCAEPEPVSSVSDTSPEEDVARCLMMLSRDVW 120

Query: 181 MRNNDEAQD-------HKIVEMVEESEEIKLT--RGKYRCEKCKKAFRSYHALGGHKKVC 231
           MRN +E  +        + VEM+EE+EEIK++  RGK+RCEKC K FRS  AL GHK++C
Sbjct: 121 MRNIEEEYEEQGGKDGERSVEMLEEAEEIKVSKIRGKFRCEKCMKLFRSSRALSGHKRIC 180

Query: 232 ETNINAGTKVA----ADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVAT 287
             N     + A    A+++IFECP+C+KVFGSGQALGGHKRSHL+ +S+S +        
Sbjct: 181 SLNATEVRRFAGSADANDRIFECPYCFKVFGSGQALGGHKRSHLIGSSTSISG-----VV 235

Query: 288 DPAVKFENNLIDLNLPAPLEEDDFSVVSDA 317
           + + K ENNLIDLNLPAP+E+D+FSVVSDA
Sbjct: 236 EASTKLENNLIDLNLPAPVEDDEFSVVSDA 265

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072552|gb|ACJ84636.1| unknown [Medicago truncatula]

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 171/337 (50%), Positives = 219/337 (64%), Gaps = 41/337 (12%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQ--QPSDSTESASTSSSSSGE 58
           ME+HKCKLC+R+F NGRALGGHMKAHLA      K+ Q+Q  QP   + S S       E
Sbjct: 1   MERHKCKLCSRTFGNGRALGGHMKAHLAI----AKSQQKQFTQPGSFSSSESEEDEEEEE 56

Query: 59  GVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRN-P 117
              +            + Y LR NPKKS + ADPEFSF  ++ SV+VQDRESETES+N P
Sbjct: 57  EKAL------------INYVLRENPKKSLKVADPEFSFVRETESVIVQDRESETESKNNP 104

Query: 118 TRRRSKRNRKLFTAHQDHHQKRMLK----KPNFL--ESPA---EPEPVSSVSDTSPEEDV 168
           TR+  +R+++    + D++ +  L     KP+F+   +P+   E EPVSSVSDTSPEEDV
Sbjct: 105 TRQ--QRSKRNRKQNNDNNNQNFLPQKKPKPSFMVPTTPSQFTEQEPVSSVSDTSPEEDV 162

Query: 169 AMCLMMLSRDVWMR------NNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYH 222
           AMCLMMLSRD W R      N ++ +D   VE + + + +K  RGK+ CE C K FRS  
Sbjct: 163 AMCLMMLSRDRWSRKMNNVNNVEQEEDEGSVEKISKVKLLKRVRGKHLCENCGKTFRSSR 222

Query: 223 ALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAA 282
           ALG H+ +C  +  A      D+KIFECPFC+KVFGSGQALGGHKRSHL+  SSST+ A 
Sbjct: 223 ALGSHRSICCRD-EAKNGNGNDDKIFECPFCFKVFGSGQALGGHKRSHLMIPSSSTSTAN 281

Query: 283 AVVATDP-AVKFENNLIDLNLPAPL-EEDDFSVVSDA 317
             V  +P A +F+++ I+LN+PAPL EEDD SVVSDA
Sbjct: 282 --VNVNPTAARFKDSFIELNMPAPLEEEDDLSVVSDA 316

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147773504|emb|CAN66783.1| hypothetical protein VITISV_013510 [Vitis vinifera]

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 183/325 (56%), Positives = 216/325 (66%), Gaps = 34/325 (10%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           MEKHKCKLC+R FS+GRALGGHM++HLA  P+PPKT Q    +D   S+S+SSSS  E  
Sbjct: 470 MEKHKCKLCSRRFSSGRALGGHMRSHLATLPIPPKTPQHSDRTDPVSSSSSSSSSEEE-- 527

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRR 120
           E   +     EEK+L YGLR NPK+SFR ADPEFSFAVD+GSVV QDRESETESRNPTRR
Sbjct: 528 EEGEEQRSEGEEKALAYGLRENPKRSFRLADPEFSFAVDAGSVV-QDRESETESRNPTRR 586

Query: 121 RSKRNRKLFTAHQDHHQKR-MLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDV 179
           RSKR  KL   +Q    K+  L K    ESP EPEPVSSVS+T PEED+AMCL+MLSRD 
Sbjct: 587 RSKRAWKLGVPNQGLDLKKPKLGKSETTESPTEPEPVSSVSNTWPEEDIAMCLVMLSRDT 646

Query: 180 WMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHK----------K 229
           W R+ DE QD      +++ EE  +       E CKK F S+ A    K          K
Sbjct: 647 WTRS-DEDQD------IKDEEERSVD------ETCKKVFSSFEASPVEKVVNKASKKKIK 693

Query: 230 VC---ETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVA 286
            C   E+N   G  V    KI+ECPFC +VF SGQALGGHKRSHLL NS++T AAAA  A
Sbjct: 694 ACFEDESNPENGGNV----KIYECPFCSRVFRSGQALGGHKRSHLLNNSTTTTAAAAAAA 749

Query: 287 TDPAVKFENNLIDLNLPAPLEEDDF 311
           +  + KF+N +IDLNLPAP E+  F
Sbjct: 750 SANSEKFQNGVIDLNLPAPPEDYAF 774

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495992|ref|XP_003635129.1| PREDICTED: zinc finger protein ZAT4-like [Vitis vinifera]

 Score =  276 bits (706), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 183/326 (56%), Positives = 217/326 (66%), Gaps = 34/326 (10%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           MEKHKCKLC+R FS+GRALGGHM++HLA  P+PPKT Q    +D   S+S+SSSS  E  
Sbjct: 1   MEKHKCKLCSRRFSSGRALGGHMRSHLATLPIPPKTPQHSDRTDPVSSSSSSSSSEEEEE 60

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRR 120
             + +S    EEK+L YGLR NPK+SFR ADPEFSFAVD+GSVV QDRESETESRNPTRR
Sbjct: 61  GEEQRS--EGEEKALAYGLRENPKRSFRLADPEFSFAVDAGSVV-QDRESETESRNPTRR 117

Query: 121 RSKRNRKLFTAHQDHHQKR-MLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDV 179
           RSKR  KL   +Q    K+  L K    ESP E EPVSSVS+T PEED+AMCL+MLSRD 
Sbjct: 118 RSKRAWKLGVPNQGLDLKKPKLGKSETTESPTELEPVSSVSNTWPEEDIAMCLVMLSRDT 177

Query: 180 WMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHK----------K 229
           W R+ DE QD      +++ EE  +       E CKK F S+ A    K          K
Sbjct: 178 WTRS-DEDQD------IKDEEERSVD------ETCKKVFSSFEASPVEKVVNKASKKKIK 224

Query: 230 VC---ETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVA 286
            C   E+N   G  V    KI+ECPFC +VF SGQALGGHKRSHLL NS++T AAAA  A
Sbjct: 225 ACFEDESNPENGGNV----KIYECPFCSRVFRSGQALGGHKRSHLLNNSTTTTAAAAAAA 280

Query: 287 TDPAVKFENNLIDLNLPAPLEEDDFS 312
           +  + KF+N +IDLNLPAP E+  FS
Sbjct: 281 SANSEKFQNGVIDLNLPAPPEDYAFS 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540524|ref|XP_003538738.1| PREDICTED: zinc finger protein ZAT9-like [Glycine max]

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 175/332 (52%), Positives = 210/332 (63%), Gaps = 59/332 (17%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           ME+HKCKLC+R+FSNGRALGGHMKAHLA  PLPPK       +  + ++S+  ++     
Sbjct: 1   MERHKCKLCSRTFSNGRALGGHMKAHLATLPLPPKPPLSPSAASFSSNSSSEEATH---- 56

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRR 120
                     +EKSL YGLR NPKK FR ADPEF+ A      VVQDRESETES+NPTRR
Sbjct: 57  ----------DEKSLIYGLRENPKKCFRLADPEFNMA-----SVVQDRESETESKNPTRR 101

Query: 121 RSKRNRKLFTAHQDHHQKRMLKKP--NFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRD 178
           RS+R R+   +         LKK   +F+ES   PEPVSSVSDTSPEEDVAMCLMMLSRD
Sbjct: 102 RSERTRRTVNSE--------LKKAKLSFMES---PEPVSSVSDTSPEEDVAMCLMMLSRD 150

Query: 179 VWMRNN-----------DEAQDHKIVEMVEESEEIKL--TRGKYRCEKCKKAFRSYHALG 225
            W +NN                 +  E    S EIKL   RGK++C+ C K FRS  ALG
Sbjct: 151 RWSKNNNNNIIIINNVVSNDDVVEEEEEGGRSVEIKLRRVRGKHKCQSCGKTFRSSRALG 210

Query: 226 GHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVV 285
           GH+ +CE + N       D K F+CPFC KVFGSGQALGGHKRSHL+ +SSST       
Sbjct: 211 GHRSICEGSGN-------DSKTFQCPFCSKVFGSGQALGGHKRSHLMPSSSST------- 256

Query: 286 ATDPAVKFENNLIDLNLPAPLEEDDFSVVSDA 317
           A + + + + + IDLNLPAP E+DD SVVSDA
Sbjct: 257 ANNDSFRLKESFIDLNLPAPAEDDDLSVVSDA 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497137|ref|XP_003517419.1| PREDICTED: zinc finger protein ZAT9-like [Glycine max]

 Score =  263 bits (673), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 185/336 (55%), Positives = 218/336 (64%), Gaps = 57/336 (16%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           ME++KCKLC+R+FSNGRALGGHMKAHLA  PLPP+  Q      +  S S++SSS  E  
Sbjct: 1   MERYKCKLCSRTFSNGRALGGHMKAHLATLPLPPQNQQPPLSPSAAASFSSNSSSEQEQA 60

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRR 120
                     +EKSL YGLR NPKK FR ADPEF    D+GS VVQDRESETES+NPTRR
Sbjct: 61  --------THDEKSLIYGLRENPKKCFRLADPEF----DTGS-VVQDRESETESKNPTRR 107

Query: 121 RSKRNRKLFTAHQDHHQKRMLKKP--NFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRD 178
           RSKR R+     Q        KKP  +F+ES   PEPVSSVSDTSPEEDVAMCLMMLSRD
Sbjct: 108 RSKRTRRPVNLEQ--------KKPKLSFMES---PEPVSSVSDTSPEEDVAMCLMMLSRD 156

Query: 179 VWMRNNDEAQDHKIVEMVEESE---------------EIKL--TRGKYRCEKCKKAFRSY 221
            W +NN+    +   E V E E               EIKL   RGK++C+ C K FRS 
Sbjct: 157 RWSKNNNINVVNVNDEDVVEEEEEEEEEEEEGGRSVLEIKLRRVRGKHQCQSCGKTFRSS 216

Query: 222 HALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAA 281
            ALG H+ +CE + N       D KIF+CPFC KVFGSGQALGGHKRSHL+ +SS+T   
Sbjct: 217 RALGSHRSICEGSGN-------DSKIFQCPFCSKVFGSGQALGGHKRSHLMPSSSTT--- 266

Query: 282 AAVVATDPAVKFENNLIDLNLPAPLEEDDFSVVSDA 317
               A + +V+ + + IDLNLPAP E+DD SVVSDA
Sbjct: 267 ----ANNDSVRLKESFIDLNLPAPPEDDDLSVVSDA 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514316|ref|XP_003525852.1| PREDICTED: zinc finger protein ZAT9-like [Glycine max]

 Score =  261 bits (667), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 164/324 (50%), Positives = 186/324 (57%), Gaps = 66/324 (20%)

Query: 1   MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV 60
           M++HKCKLC+RSFSNGRALGGHMKAHLA  PLPPK +     SDS +             
Sbjct: 1   MDRHKCKLCSRSFSNGRALGGHMKAHLATLPLPPKPHSYSSSSDSEQEQEQE-------- 52

Query: 61  EVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRR 120
                        SL Y LR NPKKSFR ADPE             DRESETESRNPTR+
Sbjct: 53  -------------SLNYALRENPKKSFRVADPE-------------DRESETESRNPTRQ 86

Query: 121 RSKRNRKLFTAHQDHHQKRMLKKPNFL-ESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDV 179
           RSKRNRK                P        EPEP+SSVSDTSPEEDVAMCLMMLSRD 
Sbjct: 87  RSKRNRKSTM-------------PKLTPPPHPEPEPLSSVSDTSPEEDVAMCLMMLSRDT 133

Query: 180 WMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC------ET 233
           W ++               SE  K  RG + C KC K+FRS  A G H+ VC      + 
Sbjct: 134 WQQHKHANAATPKRRCSSGSEIKKNVRGNHLCHKCHKSFRSSRAFGSHRNVCCPREEGQN 193

Query: 234 NINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVATDPAVKF 293
           N N         K+FECPFCYKVFGSGQALGGHKRSHL+ +SSST         + +VK 
Sbjct: 194 NYNNNRST----KVFECPFCYKVFGSGQALGGHKRSHLIPSSSST--------VNDSVKL 241

Query: 294 ENNLIDLNLPAPLEEDDFSVVSDA 317
           +++ IDLNLPAP E+DD SVVSDA
Sbjct: 242 KHSFIDLNLPAPAEDDDLSVVSDA 265

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
TAIR|locus:2055583	314	AT2G45120 "AT2G45120" [Arabido	0.757	0.764	0.348	8.3e-39
TAIR|locus:2205649	267	AT1G02030 "AT1G02030" [Arabido	0.403	0.479	0.415	3.9e-35
TAIR|locus:2103311	288	AT3G60580 "AT3G60580" [Arabido	0.334	0.368	0.442	1.8e-29
TAIR|locus:2130898	204	AT4G16610 "AT4G16610" [Arabido	0.085	0.132	0.777	1.8e-20
TAIR|locus:2197890	455	AT1G26610 "AT1G26610" [Arabido	0.176	0.123	0.483	2.6e-18
TAIR|locus:2161168	304	AT5G61470 "AT5G61470" [Arabido	0.211	0.220	0.418	1.1e-14
TAIR|locus:2091201	273	ZF2 "AT3G19580" [Arabidopsis t	0.223	0.260	0.419	2.2e-13
TAIR|locus:2083053	215	AT3G49930 "AT3G49930" [Arabido	0.318	0.469	0.354	3.9e-12
TAIR|locus:2142674	292	AT5G03510 "AT5G03510" [Arabido	0.201	0.219	0.383	3.7e-10
TAIR|locus:2046153	286	AT2G28200 "AT2G28200" [Arabido	0.201	0.223	0.373	6.5e-10

TAIR|locus:2055583 AT2G45120 "AT2G45120" [Arabidopsis thaliana (taxid:3702)]

 Score = 321 (118.1 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
 Identities = 92/264 (34%), Positives = 124/264 (46%)

Query:    68 EVAEEKSLGYGLRNNPKKSFRFADP-EFSFAVDSGSVVVQDRESETEXXXXXXXXXXXXX 126
             +   + S   G  +N K + R  D  EF FA D       D ESETE             
Sbjct:    58 DTESDASSSSGEFDNQKMN-RLDDELEFDFAEDD------DVESETESSRINPTRRRSKR 110

Query:   127 XLFTAHQDHH-QKRMLKKPNFLXXXXXXXXXXXXXDTSPEEDVAMCLMMLSRDVWMRNND 185
                    D   +K    +P+ L             DT+ EED+A CL+MLSRD W +   
Sbjct:   111 TRKLGSFDFDFEKLTTSQPSELVAEPEHHSSAS--DTTTEEDLAFCLIMLSRDKWKQQKK 168

Query:   186 EAQDHKIVEMVEESEEIKLT--RGKYRCEKCKKAFRSYHALGGHK------KVCETNIN- 236
             + Q  +  E   +SE+ K +  RG+++CE C K F+SY ALGGH+      K C T    
Sbjct:   169 KKQRVEEDETDHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQ 228

Query:   237 AGTKVAA---DEKIFECPFCYKVFGSGQALGGHKRSH-LLANXXXXXXXXXXXXXDPAVK 292
               T+      ++K+ ECP C++VF SGQALGGHKRSH                  +  V 
Sbjct:   229 VETEYVLGVKEKKVHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVS 288

Query:   293 FENNLIDLNLPAPLEEDDFSVVSD 316
              +  +IDLNLPAP EED+ S+V D
Sbjct:   289 VKQRMIDLNLPAPNEEDETSLVFD 312

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2205649 AT1G02030 "AT1G02030" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 66/159 (41%), Positives = 84/159 (52%)

Query:   165 EEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGK-YRCEKCKKAFRSYHA 223
             EEDVA+ LM+LSRD W +  +E+ +          E  K  R K + CE C+K F+SY A
Sbjct:   125 EEDVALSLMLLSRDKWEKEEEESDE----------ERWKKKRNKWFECETCEKVFKSYQA 174

Query:   224 LGGH-----KKVCETNINAGTKVAADEKI-----FECPFCYKVFGSGQALGGHKRSHLLA 273
             LGGH     KK+ ET+     ++   +K       ECP C KVF SGQALGGHKRSH  A
Sbjct:   175 LGGHRASHKKKIAETDQLGSDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSHASA 234

Query:   274 NXXXXXXXXXXXXXDPAVKFENNLIDLNLPAPLEEDDFS 312
             N                     +LIDLNLPAP EE++ +
Sbjct:   235 NNEFTRRSGIII----------SLIDLNLPAPSEEEEMA 263

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2103311 AT3G60580 "AT3G60580" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
 Identities = 54/122 (44%), Positives = 69/122 (56%)

Query:   205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTK------------VAADEKIFECPF 252
             T+G+Y+CE C K F+SY ALGGH+   + N  +  K            V   ++I ECP 
Sbjct:   169 TKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPI 228

Query:   253 CYKVFGSGQALGGHKRSHLLANXXXXXXXXXXXXXDPAVKFENNLIDLNLPAPLEEDDFS 312
             C +VF SGQALGGHKRSH + N             + +VK    +IDLNLPAP EED+ S
Sbjct:   229 CLRVFASGQALGGHKRSHGVGNLSVNQQRRVHR--NESVK--QRMIDLNLPAPTEEDEVS 284

Query:   313 VV 314
             VV
Sbjct:   285 VV 286

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2130898 AT4G16610 "AT4G16610" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
 Identities = 21/27 (77%), Positives = 25/27 (92%)

Query:     3 KHKCKLCTRSFSNGRALGGHMKAHLAA 29
             KHKCKLC++SF NGRALGGHMK+HL +
Sbjct:     4 KHKCKLCSKSFCNGRALGGHMKSHLVS 30

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2197890 AT1G26610 "AT1G26610" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
 Identities = 29/60 (48%), Positives = 35/60 (58%)

Query:   249 ECPFCYKVFGSGQALGGHKRSHLLANXXXXXXXXXXXXXDPAVKFENNLIDLNLPAPLEE 308
             ECP C++VF SGQALGGHKRSH + N                    + LIDLNLPAP++E
Sbjct:   400 ECPICFRVFKSGQALGGHKRSHFIGNQEHRTLVIQHQVAHEM----HTLIDLNLPAPIDE 455

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2161168 AT5G61470 "AT5G61470" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 31/74 (41%), Positives = 40/74 (54%)

Query:   206 RGKYRCEKCKKAFRSYHALGGHK---KVCETNINAGTKVAADEKI----FECPFCYKVFG 258
             + KY C+ C K  RSY ALGGH+   K     I+       D  I    +EC  C ++F 
Sbjct:   225 QSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQICNRMFA 284

Query:   259 SGQALGGHKRSHLL 272
             SGQALGGHK+ H +
Sbjct:   285 SGQALGGHKKIHYM 298

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2091201 ZF2 "AT3G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
 Identities = 34/81 (41%), Positives = 39/81 (48%)

Query:   234 NINAGTK--VAADEKIFECPFCYKVFGSGQALGGHKRSHLLANXXX-----XXXXXXXXX 286
             +I AG K  +AA  KI EC  C+KVF +GQALGGHKR H   N                 
Sbjct:   149 SIVAGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGS 208

Query:   287 XDPAVKFENN---LIDLNLPA 304
                 V  E +    IDLNLPA
Sbjct:   209 VSSTVSEERSHRGFIDLNLPA 229

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009414 "response to water deprivation" evidence=IEP;RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2083053 AT3G49930 "AT3G49930" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 44/124 (35%), Positives = 61/124 (49%)

Query:   163 SPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYH 222
             S EE +A+CL+ML+R     ++  +  H +  + +  ++       Y+C  C K+F SY 
Sbjct:    55 SEEEYLALCLLMLARGSSDHHSPPSDHHSLSPLSDHQKD-------YKCSVCGKSFPSYQ 107

Query:   223 ALGGHK----KVCETNINA--GTK----------VAADEKIFECPFCYKVFGSGQALGGH 266
             ALGGHK    K    ++N   GT           V    K   C  C+K F SGQALGGH
Sbjct:   108 ALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPSGQALGGH 167

Query:   267 KRSH 270
             KR H
Sbjct:   168 KRCH 171

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

TAIR|locus:2142674 AT5G03510 "AT5G03510" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
 Identities = 28/73 (38%), Positives = 36/73 (49%)

Query:   245 EKIFECPFCYKVFGSGQALGGHKRSH----LLANXXXXXXXXXXXXX----DPAVKFENN 296
             EK  EC  C   F SGQALGGH R H    + AN                 + +++ +N 
Sbjct:   189 EKTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAISSSSHHHHEESIRPKNF 248

Query:   297 L-IDLNLPAPLEE 308
             L +DLNLPAP +E
Sbjct:   249 LQLDLNLPAPEDE 261

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2046153 AT2G28200 "AT2G28200" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
 Identities = 25/67 (37%), Positives = 37/67 (55%)

Query:   162 TSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSY 221
             T  EED+A+CL+ML+R   + + D     KI + +  SE        Y C+ C + F S+
Sbjct:    71 TQEEEDMAICLIMLARGTVLPSPDLKNSRKIHQKIS-SENSSFY--VYECKTCNRTFSSF 127

Query:   222 HALGGHK 228
              ALGGH+
Sbjct:   128 QALGGHR 134

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M202	ZAT9_ARATH	No assigned EC number	0.3994	0.8264	0.9097	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	317
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-06
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	0.001
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	0.002

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 14/24 (58%), Positives = 16/24 (66%)

Query: 247 IFECPFCYKVFGSGQALGGHKRSH 270
           +  C  C K F S QALGGHK+SH
Sbjct: 1   VHTCGVCGKTFSSLQALGGHKKSH 24

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 12/23 (52%), Positives = 18/23 (78%)

Query: 4  HKCKLCTRSFSNGRALGGHMKAH 26
          H C +C ++FS+ +ALGGH K+H
Sbjct: 2  HTCGVCGKTFSSLQALGGHKKSH 24

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 34.5 bits (80), Expect = 0.002
 Identities = 12/21 (57%), Positives = 13/21 (61%)

Query: 209 YRCEKCKKAFRSYHALGGHKK 229
           + C  C K F S  ALGGHKK
Sbjct: 2   HTCGVCGKTFSSLQALGGHKK 22

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	317
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.91
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.9
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.87
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.83
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.83
KOG3608	467	consensus Zn finger proteins [General function pre	99.57
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.57
KOG3576	267	consensus Ovo and related transcription factors [T	99.47
KOG3608	467	consensus Zn finger proteins [General function pre	99.3
KOG3576	267	consensus Ovo and related transcription factors [T	99.27
PHA02768	55	hypothetical protein; Provisional	99.08
PHA02768	55	hypothetical protein; Provisional	99.05
PLN03086	567	PRLI-interacting factor K; Provisional	98.83
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.79
PHA00733	128	hypothetical protein	98.71
PHA00616	44	hypothetical protein	98.65
PHA00733	128	hypothetical protein	98.65
KOG3993	500	consensus Transcription factor (contains Zn finger	98.61
PLN03086	567	PRLI-interacting factor K; Provisional	98.61
PHA00732	79	hypothetical protein	98.55
PHA00616	44	hypothetical protein	98.44
KOG3993	500	consensus Transcription factor (contains Zn finger	98.4
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.32
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.26
PHA00732	79	hypothetical protein	98.25
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.11
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.98
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.93
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.89
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.82
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.74
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.72
smart00355	26	ZnF_C2H2 zinc finger.	97.58
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.55
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.52
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.48
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.37
smart00355	26	ZnF_C2H2 zinc finger.	97.35
KOG2893	341	consensus Zn finger protein [General function pred	97.23
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.18
PRK04860	160	hypothetical protein; Provisional	97.0
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.99
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.97
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.84
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.78
COG5048	467	FOG: Zn-finger [General function prediction only]	96.55
COG5048	467	FOG: Zn-finger [General function prediction only]	96.5
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.44
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.39
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.32
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.97
KOG1146	1406	consensus Homeobox protein [General function predi	95.46
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.93
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.69
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	94.55
KOG1146	1406	consensus Homeobox protein [General function predi	94.05
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.81
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	91.65
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	91.06
KOG4167	907	consensus Predicted DNA-binding protein, contains	90.49
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.0
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.37
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	87.0
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	86.31
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	85.84
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	85.7
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	85.28
KOG4124	442	consensus Putative transcriptional repressor regul	84.48
KOG2071	579	consensus mRNA cleavage and polyadenylation factor	83.16
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.94
PRK04860	160	hypothetical protein; Provisional	82.29
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	82.17
KOG2186	276	consensus Cell growth-regulating nucleolar protein	82.0
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	81.47
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	81.0
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	80.61
COG4049	65	Uncharacterized protein containing archaeal-type C	80.24
PHA00626	59	hypothetical protein	80.08

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.91  E-value=8.9e-26  Score=185.53  Aligned_cols=133  Identities=20%  Similarity=0.261  Sum_probs=108.0

Q ss_pred             CCCCCcccCcCCCccccccccccccC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLA---AHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGL   79 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~---ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~   79 (317)
                      +|+|+.|||.+++.++|.+|..+|..   .+.+        +|..|++.+.+.+.|..|.++|.  -+.+|.+|++.|..
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~--------~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSR  199 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAF--------SCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSR  199 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccc--------cCCCCCceeeehHHHhhHhhccC--CCcccccccccccc
Confidence            58999999999999999999999975   2334        67777777776666666666665  56666667666644


Q ss_pred             CCCccccccccCCccccccCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhcCCCCCCCCCCCCCCCCC
Q 021090           80 RNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSV  159 (317)
Q Consensus        80 ~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (317)
                      .=.|                                                                            
T Consensus       200 PWLL----------------------------------------------------------------------------  203 (279)
T KOG2462|consen  200 PWLL----------------------------------------------------------------------------  203 (279)
T ss_pred             hHHh----------------------------------------------------------------------------
Confidence            3333                                                                            


Q ss_pred             CCCChhhHHHHHHhhhcccccccCCchhhhhHHHhhhhhhhhhhccCcceechhhhhhccCccchhhhhhhhhccccccc
Q 021090          160 SDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGT  239 (317)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~  239 (317)
                                                           ..|.++|+|++||.|..|+|.|..+++|..||++|.       
T Consensus       204 -------------------------------------QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS-------  239 (279)
T KOG2462|consen  204 -------------------------------------QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS-------  239 (279)
T ss_pred             -------------------------------------hcccccccCCCCccCCcccchhcchHHHHHHHHhhc-------
Confidence                                                 467777889999999999999999999999998776       


Q ss_pred             ccccCCccccCCccccccCCcccccchhhh
Q 021090          240 KVAADEKIFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                          +.|+|+|..|+|+|.++++|.+|...
T Consensus       240 ----~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  240 ----DVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ----CCccccCcchhhHHHHHHHHHHhhhh
Confidence                89999999999999999999999764

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.90  E-value=1.1e-24  Score=201.50  Aligned_cols=253  Identities=17%  Similarity=0.167  Sum_probs=154.1

Q ss_pred             CCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCC----CCccC---cCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKS----PEVAE---EKSL   75 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~----~~~C~---~c~~   75 (317)
                      |-.|-+|-|..+.++.|+.|.|+|+|||||        +|.+|+..|.++++|+.||.+|....    .+.|+   +|.+
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPF--------kCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~  676 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPF--------KCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQK  676 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCcc--------ccccccchhccccchhhcccccccCccccccccCCchhhhcc
Confidence            567999999999999999999999999999        99999999999999999999997664    47899   9999


Q ss_pred             CCCCCCCccccccccCCccccccCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhcC----------CC
Q 021090           76 GYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKK----------PN  145 (317)
Q Consensus        76 ~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~----------~~  145 (317)
                      .|.....|..|+++|.+....+.....     ......+.|..|.+.+.....+..+...+-......          .+
T Consensus       677 kftn~V~lpQhIriH~~~~~s~g~~a~-----e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~  751 (958)
T KOG1074|consen  677 KFTNAVTLPQHIRIHLGGQISNGGTAA-----EGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEE  751 (958)
T ss_pred             cccccccccceEEeecCCCCCCCcccc-----cccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccc
Confidence            999999999999998854433221111     112334455556555544444444433331111000          00


Q ss_pred             CCCCC----------CCCCCCCCCCCCChhhH-----H------HHHH-hhhcccccc-------------cCCchhhhh
Q 021090          146 FLESP----------AEPEPVSSVSDTSPEED-----V------AMCL-MMLSRDVWM-------------RNNDEAQDH  190 (317)
Q Consensus       146 ~~~~~----------~~~~~~~~~~~~~~~~~-----~------~~~~-~~~~~~~~~-------------~~~~~~~~~  190 (317)
                      ....+          .+.+....+....++..     .      .+.. ...+.....             ...+.....
T Consensus       752 ~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~  831 (958)
T KOG1074|consen  752 LDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWN  831 (958)
T ss_pred             cccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhc
Confidence            00000          00000000000000000     0      0000 000000000             000000000


Q ss_pred             HHHhh--------------------hhhhhhhh----------ccCcceechhhhhhccCccchhhhhhhhhcccccccc
Q 021090          191 KIVEM--------------------VEESEEIK----------LTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTK  240 (317)
Q Consensus       191 ~~~~~--------------------~~~~~~~~----------~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~  240 (317)
                      ....+                    +......-          .....+.|.+||+.|...+.|..|+++|+        
T Consensus       832 ~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHt--------  903 (958)
T KOG1074|consen  832 QETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHT--------  903 (958)
T ss_pred             ccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCC--------
Confidence            00000                    00000000          01234899999999999999999998876        


Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCcccchhh
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTA  279 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~a  279 (317)
                         |+|||.|.+|+++|..+.+|+.||.+|++....+-.
T Consensus       904 ---g~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  904 ---GPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             ---CCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence               999999999999999999999999999998766543

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.87  E-value=2.4e-22  Score=186.19  Aligned_cols=81  Identities=23%  Similarity=0.402  Sum_probs=64.4

Q ss_pred             HHhhhhhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC---ccccccCCcccccchhh
Q 021090          192 IVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP---FCYKVFGSGQALGGHKR  268 (317)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~---~C~k~F~~~~~L~~H~~  268 (317)
                      ....+.-|.+.|+++|||+|.+||+.|+++.+|+.||-+|.       ..+.-.-+|.|+   +|-+.|...-.|..|.+
T Consensus       617 C~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHk-------a~p~~R~q~ScP~~~ic~~kftn~V~lpQhIr  689 (958)
T KOG1074|consen  617 CPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHK-------AKPPARVQFSCPSTFICQKKFTNAVTLPQHIR  689 (958)
T ss_pred             chhhhhhhhhcccCcCccccccccchhccccchhhcccccc-------cCccccccccCCchhhhcccccccccccceEE
Confidence            34456778888999999999999999999999999998875       334445578999   99999999999999999


Q ss_pred             hccCcccchhh
Q 021090          269 SHLLANSSSTA  279 (317)
Q Consensus       269 ~H~~~~~~~~a  279 (317)
                      +|+++..+.+-
T Consensus       690 iH~~~~~s~g~  700 (958)
T KOG1074|consen  690 IHLGGQISNGG  700 (958)
T ss_pred             eecCCCCCCCc
Confidence            99977554443

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.83  E-value=7.9e-22  Score=162.36  Aligned_cols=130  Identities=18%  Similarity=0.193  Sum_probs=103.5

Q ss_pred             cCCCCCccCcCCCCCCCCCCccccccccCCccccccCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhc
Q 021090           63 KGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLK  142 (317)
Q Consensus        63 ~~~~~~~C~~c~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  142 (317)
                      .....|+|+.|++.|.+..+|-||.+.|-+..               +...+.|..|++.+.+...              
T Consensus       126 ~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~---------------s~ka~~C~~C~K~YvSmpA--------------  176 (279)
T KOG2462|consen  126 AKHPRYKCPECGKSYSTSSNLSRHKQTHRSLD---------------SKKAFSCKYCGKVYVSMPA--------------  176 (279)
T ss_pred             ccCCceeccccccccccccccchhhccccccc---------------ccccccCCCCCceeeehHH--------------
Confidence            34567899999999999999999988886521               1334566666665555422              


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChhhHHHHHHhhhcccccccCCchhhhhHHHhhhhhhhhhhccCcceechhhhhhccCcc
Q 021090          143 KPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYH  222 (317)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~  222 (317)
                                                                           +.-|.++|+  -+++|.+|||.|.+..
T Consensus       177 -----------------------------------------------------LkMHirTH~--l~c~C~iCGKaFSRPW  201 (279)
T KOG2462|consen  177 -----------------------------------------------------LKMHIRTHT--LPCECGICGKAFSRPW  201 (279)
T ss_pred             -----------------------------------------------------HhhHhhccC--CCcccccccccccchH
Confidence                                                                 234444443  6899999999999999


Q ss_pred             chhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccchhhhhhhcccC
Q 021090          223 ALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVAT  287 (317)
Q Consensus       223 ~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~a~~~~~~~~  287 (317)
                      .|+.|+|+|+           |||||.|+.|+|+|.-+++|..||++|.+.+--.+..++..+++
T Consensus       202 LLQGHiRTHT-----------GEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl  255 (279)
T KOG2462|consen  202 LLQGHIRTHT-----------GEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFAL  255 (279)
T ss_pred             Hhhccccccc-----------CCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHH
Confidence            9999998877           99999999999999999999999999999998888888866654

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.83  E-value=7.3e-21  Score=173.75  Aligned_cols=53  Identities=25%  Similarity=0.417  Sum_probs=50.2

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVE   61 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   61 (317)
                      +|+|+|++|||.|..+..|+.|+|||.|||||        .|+.|.+.|+.+++...||..
T Consensus       279 lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPf--------eCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  279 LRKFKCTECGKAFKFKHHLKEHLRIHSGEKPF--------ECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hccccccccchhhhhHHHHHhhheeecCCCCc--------CCcccccccccCCcccccccc
Confidence            58999999999999999999999999999999        999999999999998888776

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.57  E-value=2.6e-17  Score=139.24  Aligned_cols=192  Identities=16%  Similarity=0.199  Sum_probs=135.4

Q ss_pred             CCCC--cccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc--CCCCCccCcCCCCCCC
Q 021090            4 HKCK--LCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVK--GKSPEVAEEKSLGYGL   79 (317)
Q Consensus         4 ~~C~--~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~--~~~~~~C~~c~~~f~~   79 (317)
                      +.|.  .|-+.|.+++.|.+|+|+|++||..        .|+-|+..|+++..|-.|.+...  ...+|.|..|.+.|.+
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvv--------ACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaT  249 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVV--------ACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFAT  249 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEE--------ecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhH
Confidence            4455  6999999999999999999999999        99999999999999988866544  4458999999999999


Q ss_pred             CCCccccccccCCccccccCCCCeeecCCcccccccCCCcccccccccccchhhhh-hhhhhhcCCCCCCCCCCCCCCCC
Q 021090           80 RNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDH-HQKRMLKKPNFLESPAEPEPVSS  158 (317)
Q Consensus        80 ~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  158 (317)
                      ...|+-|+..|-.                    -+.||.|...-.....|..|.+. |......+               
T Consensus       250 eklL~~Hv~rHvn--------------------~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfK---------------  294 (467)
T KOG3608|consen  250 EKLLKSHVVRHVN--------------------CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFK---------------  294 (467)
T ss_pred             HHHHHHHHHHhhh--------------------cccccccccCCCChHHHHHHHHhhhccCCCcc---------------
Confidence            9999999887743                    46777776666666666555555 32211111               


Q ss_pred             CCCCChhhHHHHHHhhhcccccccCCchhhhhHHHhhhhhhhhhhccCcceechh--hhhhccCccchhhhhhhhhcccc
Q 021090          159 VSDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEK--CKKAFRSYHALGGHKKVCETNIN  236 (317)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~  236 (317)
                                              +..++.......++..|...|+ +..|.|..  |...|++...|++|++.+     
T Consensus       295 ------------------------Cd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~ev-----  344 (467)
T KOG3608|consen  295 ------------------------CDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEV-----  344 (467)
T ss_pred             ------------------------ccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHh-----
Confidence                                    1222222233334445555553 55566655  666666666666665543     


Q ss_pred             cccccccC--CccccCCccccccCCcccccchhhhccCc
Q 021090          237 AGTKVAAD--EKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       237 ~H~~~h~~--ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                           |.|  +-+|.|..|.+.|++..+|..|++.-++=
T Consensus       345 -----hEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  345 -----HEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             -----ccCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence                 334  56799999999999999999996544333

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.57  E-value=8.8e-17  Score=147.35  Aligned_cols=54  Identities=37%  Similarity=0.694  Sum_probs=49.4

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhh
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      ..|.|+|..|||.|+.+..|+.|+|+|.           |||||.|+-|+|+|.....+-.||..
T Consensus       278 ~lRKFKCtECgKAFKfKHHLKEHlRIHS-----------GEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  278 LLRKFKCTECGKAFKFKHHLKEHLRIHS-----------GEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhccccccccchhhhhHHHHHhhheeec-----------CCCCcCCcccccccccCCcccccccc
Confidence            5678999999999999999999997665           99999999999999999999999853

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.47  E-value=1e-15  Score=120.19  Aligned_cols=82  Identities=13%  Similarity=0.181  Sum_probs=73.7

Q ss_pred             CCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNN   82 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~   82 (317)
                      .|.|.+|||.|.....|++||+-|...+.|        -|.-|++-|.....|.+|+++|.+.+||+|..|++.|..+-.
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~--------lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcs  188 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRH--------LCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCS  188 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHH--------HHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhcc
Confidence            588999999999999999999999999999        899999999988889999999998899999889888888888


Q ss_pred             ccccccccCC
Q 021090           83 PKKSFRFADP   92 (317)
Q Consensus        83 l~~H~~~~~~   92 (317)
                      |+-|++..|+
T Consensus       189 leshl~kvhg  198 (267)
T KOG3576|consen  189 LESHLKKVHG  198 (267)
T ss_pred             HHHHHHHHcC
Confidence            8888776665

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.30  E-value=3.1e-14  Score=120.83  Aligned_cols=202  Identities=11%  Similarity=0.095  Sum_probs=150.8

Q ss_pred             CCCC--cccCcCCCccccccccccccCCCCCC--CCCC---CCCCCC--CCCCCCCCCCCCCCCCccccCCCCCccCcCC
Q 021090            4 HKCK--LCTRSFSNGRALGGHMKAHLAAHPLP--PKTN---QQQQPS--DSTESASTSSSSSGEGVEVKGKSPEVAEEKS   74 (317)
Q Consensus         4 ~~C~--~Cgk~F~~~~~L~~H~r~H~~ek~~~--~~~~---~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~   74 (317)
                      |.|.  .|+..|.+...|..|+-.|..---|.  ..+.   ....|.  .|...+..+..|..|.+.|++++-..|+.|+
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg  214 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCG  214 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHH
Confidence            5565  69999999999999999887532332  1111   112343  5778888999999999999999999999999


Q ss_pred             CCCCCCCCccccccccCCccccccCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhcCCCCCCCCCCCC
Q 021090           75 LGYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPE  154 (317)
Q Consensus        75 ~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (317)
                      ..|+.+..|..|++.-..-.                ...+.|..|.+.|...+.|..|.+.|..-  .++..        
T Consensus       215 ~~F~~~tkl~DH~rRqt~l~----------------~n~fqC~~C~KrFaTeklL~~Hv~rHvn~--ykCpl--------  268 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQTELN----------------TNSFQCAQCFKRFATEKLLKSHVVRHVNC--YKCPL--------  268 (467)
T ss_pred             HHhccccHHHHHHHhhhhhc----------------CCchHHHHHHHHHhHHHHHHHHHHHhhhc--ccccc--------
Confidence            99999999999987654311                23578888888888888888887776321  11111        


Q ss_pred             CCCCCCCCChhhHHHHHHhhhcccccccCCchhhhhHHHhhhhhhhhh-hccCcceechhhhhhccCccchhhhhhhhhc
Q 021090          155 PVSSVSDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEI-KLTRGKYRCEKCKKAFRSYHALGGHKKVCET  233 (317)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  233 (317)
                                                     ++..-.....+..|.+. |+.++||+|+.|++.|.+.+.|.+|..+|. 
T Consensus       269 -------------------------------Cdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-  316 (467)
T KOG3608|consen  269 -------------------------------CDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-  316 (467)
T ss_pred             -------------------------------cccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-
Confidence                                           11111222334556655 678999999999999999999999998773 


Q ss_pred             ccccccccccCCccccCCc--cccccCCcccccchhhhcc-Ccc
Q 021090          234 NINAGTKVAADEKIFECPF--CYKVFGSGQALGGHKRSHL-LAN  274 (317)
Q Consensus       234 ~~~~H~~~h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H~-~~~  274 (317)
                                 +-.|.|+.  |..+|++...|++|++-|. |.+
T Consensus       317 -----------~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~n  349 (467)
T KOG3608|consen  317 -----------KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNN  349 (467)
T ss_pred             -----------ccceecCCCCCcHHHHHHHHHHHHHHHhccCCC
Confidence                       77899999  9999999999999987554 544

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.27  E-value=6.6e-13  Score=104.55  Aligned_cols=83  Identities=17%  Similarity=0.306  Sum_probs=71.4

Q ss_pred             cccCCchhhhhHHHhhhhhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCC
Q 021090          180 WMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGS  259 (317)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~  259 (317)
                      ...+..+...+....++.+|..-|..-+.|-|..|||.|-....|++|+|+|+           |-|||+|..|+|+|++
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rtht-----------gvrpykc~~c~kaftq  185 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHT-----------GVRPYKCSLCEKAFTQ  185 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhcccc-----------CccccchhhhhHHHHh
Confidence            34455677778888889999999998999999999999999999999997776           9999999999999999


Q ss_pred             cccccchhh-hccCc
Q 021090          260 GQALGGHKR-SHLLA  273 (317)
Q Consensus       260 ~~~L~~H~~-~H~~~  273 (317)
                      .-.|..|++ +|.-.
T Consensus       186 rcsleshl~kvhgv~  200 (267)
T KOG3576|consen  186 RCSLESHLKKVHGVQ  200 (267)
T ss_pred             hccHHHHHHHHcCch
Confidence            999999975 66543

>PHA02768 hypothetical protein; Provisional

Probab=99.08  E-value=3.2e-11  Score=75.43  Aligned_cols=45  Identities=11%  Similarity=0.208  Sum_probs=40.6

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccc
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGG  265 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~  265 (317)
                      -|.|++||+.|...++|..|+++|+             +||+|..|++.|.+++.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-------------k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-------------TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-------------CcccCCcccceecccceeEE
Confidence            3899999999999999999998872             69999999999999988853

>PHA02768 hypothetical protein; Provisional

Probab=99.05  E-value=3.7e-11  Score=75.14  Aligned_cols=43  Identities=14%  Similarity=0.335  Sum_probs=36.2

Q ss_pred             CCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSS   55 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l   55 (317)
                      -|.|++|||.|.+.+.|.+|||+|+  ++|        .|..|+..|+..+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~--------kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNL--------KLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Ccc--------cCCcccceeccccee
Confidence            4899999999999999999999998  678        777777777655544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.83  E-value=8.1e-10  Score=102.53  Aligned_cols=62  Identities=13%  Similarity=0.338  Sum_probs=49.0

Q ss_pred             hhhhhhhhccCcceechhhhhhccC----------ccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccc
Q 021090          196 VEESEEIKLTRGKYRCEKCKKAFRS----------YHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGG  265 (317)
Q Consensus       196 ~~~~~~~~~~~~~~~C~~C~k~f~~----------~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~  265 (317)
                      +..|...|...+++.|.+|++.|..          .+.|..|+.++            |.+++.|..||+.|..+. |..
T Consensus       492 L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C------------G~rt~~C~~Cgk~Vrlrd-m~~  558 (567)
T PLN03086        492 MVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC------------GSRTAPCDSCGRSVMLKE-MDI  558 (567)
T ss_pred             HHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc------------CCcceEccccCCeeeehh-HHH
Confidence            4567777889999999999999963          34688888765            899999999999998765 446


Q ss_pred             hh-hhc
Q 021090          266 HK-RSH  270 (317)
Q Consensus       266 H~-~~H  270 (317)
                      |+ .+|
T Consensus       559 H~~~~h  564 (567)
T PLN03086        559 HQIAVH  564 (567)
T ss_pred             HHHHhh
Confidence            64 344

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.79  E-value=1.5e-09  Score=58.09  Aligned_cols=26  Identities=35%  Similarity=0.774  Sum_probs=21.2

Q ss_pred             chhhhhhhhhcccccccccccCCccccCCccccccCC
Q 021090          223 ALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGS  259 (317)
Q Consensus       223 ~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~  259 (317)
                      +|.+|+++|+           |+|||+|++|+++|.+
T Consensus         1 ~l~~H~~~H~-----------~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHT-----------GEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHS-----------SSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcC-----------CCCCCCCCCCcCeeCc
Confidence            3667776655           9999999999999974

...

>PHA00733 hypothetical protein

Probab=98.71  E-value=4.7e-09  Score=79.75  Aligned_cols=61  Identities=25%  Similarity=0.317  Sum_probs=50.9

Q ss_pred             hhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhcc
Q 021090          197 EESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       197 ~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      ..+...+ +.++|.|..||+.|.+...|..|++.|             +.+|.|++|++.|.+...|..|++..+
T Consensus        63 ~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h-------------~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         63 YKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRYT-------------EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             HhhcccC-CCCCccCCCCCCcCCCHHHHHHHHhcC-------------CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            3443333 588999999999999999999999764             347999999999999999999987544

>PHA00616 hypothetical protein

Probab=98.65  E-value=2.2e-09  Score=63.87  Aligned_cols=30  Identities=17%  Similarity=0.294  Sum_probs=29.2

Q ss_pred             CCCCCcccCcCCCccccccccccccCCCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ||+|+.||+.|..+++|.+|++.|++++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            799999999999999999999999999998

>PHA00733 hypothetical protein

Probab=98.65  E-value=1.9e-09  Score=81.83  Aligned_cols=82  Identities=10%  Similarity=-0.060  Sum_probs=69.9

Q ss_pred             CCCCCCcccCcCCCccccccc--cc---cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGH--MK---AHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLG   76 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H--~r---~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~   76 (317)
                      +++.|.+|.+.|..+..|..|  ++   .+.+++||        .|..|+..|+....|..|+..+  ..+|.|+.|++.
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy--------~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~  108 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPY--------VCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKE  108 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCc--------cCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCc
Confidence            568899999999998888877  22   33447899        9999999999999999998876  457999999999


Q ss_pred             CCCCCCccccccccCCc
Q 021090           77 YGLRNNPKKSFRFADPE   93 (317)
Q Consensus        77 f~~~~~l~~H~~~~~~~   93 (317)
                      |.....|.+|+...|..
T Consensus       109 F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        109 FRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             cCCHHHHHHHHHHhcCc
Confidence            99999999999877763

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.61  E-value=4.1e-09  Score=92.12  Aligned_cols=54  Identities=9%  Similarity=-0.089  Sum_probs=46.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCCccccccccCCcc
Q 021090           41 QPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEF   94 (317)
Q Consensus        41 ~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l~~H~~~~~~~~   94 (317)
                      .|+.|-..|-+...|.+|.=.-..-..|+|+.|++.|.-..||--|.|-|.+..
T Consensus       269 iCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~  322 (500)
T KOG3993|consen  269 ICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRP  322 (500)
T ss_pred             HHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCch
Confidence            788888888888888888666666678999999999999999999999887744

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.61  E-value=1.1e-08  Score=95.11  Aligned_cols=62  Identities=15%  Similarity=0.101  Sum_probs=41.2

Q ss_pred             CCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGY   77 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f   77 (317)
                      .+.|++||+.|. .+.|..|+++|+  +++        .|. |+..+ ....|..|+..+-..+++.|+.|+..|
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~H--kpv--------~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFH--EPL--------QCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcC--CCc--------cCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence            356777777774 566777777764  566        666 76533 446666777777777777777776666

>PHA00732 hypothetical protein

Probab=98.55  E-value=1.9e-08  Score=69.27  Aligned_cols=47  Identities=26%  Similarity=0.525  Sum_probs=39.9

Q ss_pred             ceechhhhhhccCccchhhhhhh-hhcccccccccccCCccccCCccccccCCcccccchhhhcc
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKV-CETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      ||.|..||+.|.+...|..|++. |.              ++.|+.||++|.   .|..|++++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--------------~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--------------LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--------------CCccCCCCCEeC---ChhhhhcccC
Confidence            58999999999999999999974 42              468999999998   5888886654

>PHA00616 hypothetical protein

Probab=98.44  E-value=4.1e-08  Score=58.49  Aligned_cols=39  Identities=21%  Similarity=0.450  Sum_probs=31.6

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcccccc
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVF  257 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F  257 (317)
                      ||+|..||+.|..++.|..|++.|+           |++||.|+.---.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h-----------g~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH-----------KQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc-----------CCCccceeEEEEEE
Confidence            5889999999999999999998876           88888887644333

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.40  E-value=3.2e-08  Score=86.66  Aligned_cols=82  Identities=12%  Similarity=0.102  Sum_probs=52.7

Q ss_pred             CCCCcccCcCCCccccccccccccCCCCCC--CCCCCCCC--CCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCC
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAHLAAHPLP--PKTNQQQQ--PSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGL   79 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~--~~~~~~~~--c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~   79 (317)
                      |+|++|+|.|+.+.+|-.|.|+|-....-.  .....+.+  ...-.+....       .-....+..|.|..|++.|++
T Consensus       296 YrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r-------sg~dss~gi~~C~~C~KkFrR  368 (500)
T KOG3993|consen  296 YRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER-------SGDDSSSGIFSCHTCGKKFRR  368 (500)
T ss_pred             ecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc-------cCCcccCceeecHHhhhhhHH
Confidence            899999999999999999999996432221  00110000  0000000000       011133458999999999999


Q ss_pred             CCCccccccccCC
Q 021090           80 RNNPKKSFRFADP   92 (317)
Q Consensus        80 ~~~l~~H~~~~~~   92 (317)
                      ...|++|.-.|+.
T Consensus       369 qAYLrKHqlthq~  381 (500)
T KOG3993|consen  369 QAYLRKHQLTHQR  381 (500)
T ss_pred             HHHHHHhHHhhhc
Confidence            9999999877765

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.32  E-value=2.9e-08  Score=51.67  Aligned_cols=23  Identities=43%  Similarity=0.852  Sum_probs=21.8

Q ss_pred             CCCCcccCcCCCccccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAH   26 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H   26 (317)
                      |+|++|++.|.+++.|.+||++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999976

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.26  E-value=5.9e-08  Score=51.90  Aligned_cols=25  Identities=28%  Similarity=0.361  Sum_probs=21.4

Q ss_pred             ccccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 021090           18 ALGGHMKAHLAAHPLPPKTNQQQQPSDSTESAS   50 (317)
Q Consensus        18 ~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~   50 (317)
                      +|.+||++|++++||        .|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~--------~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPY--------KCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSE--------EESSSSEEES
T ss_pred             CHHHHhhhcCCCCCC--------CCCCCcCeeC
Confidence            488999999999999        8888887765

...

>PHA00732 hypothetical protein

Probab=98.25  E-value=3.8e-07  Score=62.81  Aligned_cols=45  Identities=18%  Similarity=0.121  Sum_probs=35.8

Q ss_pred             CCCCCcccCcCCCcccccccccc-ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKA-HLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVE   61 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~-H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   61 (317)
                      ||.|++||+.|.+.+.|+.|++. |.   ++        .|+.|++.|.   .+..|..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~--------~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LT--------KCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CC--------ccCCCCCEeC---Chhhhhcc
Confidence            69999999999999999999994 65   34        6888888776   35566543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.11  E-value=4.1e-07  Score=47.23  Aligned_cols=23  Identities=43%  Similarity=0.891  Sum_probs=13.5

Q ss_pred             ccCCccccccCCcccccchhhhc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H  270 (317)
                      |+|++|++.|.++..|..|+++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666665543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.98  E-value=3.4e-06  Score=71.48  Aligned_cols=64  Identities=22%  Similarity=0.428  Sum_probs=48.4

Q ss_pred             cCcceechh--hhhhccCccchhhhhhhhhccc--------ccccccccCCccccCCccccccCCcccccchhh
Q 021090          205 TRGKYRCEK--CKKAFRSYHALGGHKKVCETNI--------NAGTKVAADEKIFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       205 ~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~--------~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      +.+||+|.+  |.|.|+...-|+.|+.--+...        ..+...-...|||+|++|+|.|....-|+-|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            359999988  9999999999999985311000        122222234599999999999999999999975

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.93  E-value=7.8e-07  Score=46.57  Aligned_cols=24  Identities=33%  Similarity=0.784  Sum_probs=20.4

Q ss_pred             CCCCcccCcCCCcccccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999874

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.89  E-value=3.9e-06  Score=53.63  Aligned_cols=51  Identities=25%  Similarity=0.309  Sum_probs=39.6

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccC-CccccCCccccccCCcccccchhhhcc
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAAD-EKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~-ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      .|.|++|++ ......|..|....          |.. .+.+.|++|...+..  +|..|+..+.
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~----------H~~~~~~v~CPiC~~~~~~--~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDE----------HRSESKNVVCPICSSRVTD--NLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhH----------CcCCCCCccCCCchhhhhh--HHHHHHHHhc
Confidence            489999999 55567899997654          223 467999999997664  8889988764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.82  E-value=1.7e-06  Score=46.73  Aligned_cols=26  Identities=31%  Similarity=0.621  Sum_probs=24.2

Q ss_pred             CCCCCcccCcCCCccccccccccccC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      +|.|..|++.|.+...|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998863

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.74  E-value=5.9e-06  Score=44.59  Aligned_cols=26  Identities=54%  Similarity=0.694  Sum_probs=18.1

Q ss_pred             cccCCccccccCCcccccchhhhccC
Q 021090          247 IFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      ||+|.+|++.|.....|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            56777777777777777777776653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.72  E-value=6.8e-06  Score=42.85  Aligned_cols=23  Identities=48%  Similarity=0.935  Sum_probs=13.9

Q ss_pred             ccCCccccccCCcccccchhhhc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H  270 (317)
                      |.|++|++.|.+...|+.|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56666666666666666666654

...

>smart00355 ZnF_C2H2 zinc finger

Probab=97.58  E-value=1.2e-05  Score=42.65  Aligned_cols=24  Identities=33%  Similarity=0.710  Sum_probs=22.6

Q ss_pred             CCCCcccCcCCCcccccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            789999999999999999999875

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.55  E-value=2e-05  Score=57.33  Aligned_cols=61  Identities=31%  Similarity=0.448  Sum_probs=22.3

Q ss_pred             echhhhhhccCccchhhhhhhhhccc-------------ccccccccCCccccCCccccccCCcccccchhhhcc
Q 021090          210 RCEKCKKAFRSYHALGGHKKVCETNI-------------NAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       210 ~C~~C~k~f~~~~~L~~H~~~H~~~~-------------~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      .|.+|+..|.....|..|+...++-.             ....+.. -...|.|.+|++.|.....|..||+.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             -------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Cccccccccccccccccccccccccccccccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            49999999999999999997644322             1111111 1226999999999999999999999653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.52  E-value=2e-05  Score=50.29  Aligned_cols=26  Identities=23%  Similarity=0.560  Sum_probs=20.4

Q ss_pred             CCCCCcccCcCCCccccccccc-cccCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK-AHLAA   29 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r-~H~~e   29 (317)
                      .|.||+||+.| +...|..|.. .|..+
T Consensus         2 ~f~CP~C~~~~-~~~~L~~H~~~~H~~~   28 (54)
T PF05605_consen    2 SFTCPYCGKGF-SESSLVEHCEDEHRSE   28 (54)
T ss_pred             CcCCCCCCCcc-CHHHHHHHHHhHCcCC
Confidence            59999999955 5688999988 46543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.48  E-value=9.3e-05  Score=62.99  Aligned_cols=70  Identities=19%  Similarity=0.217  Sum_probs=50.7

Q ss_pred             CCCCCCc--ccCcCCCccccccccc-cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMK-AHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYG   78 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r-~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~   78 (317)
                      |||+|++  |.|.+.+..-|+-||. -|-..+.....      .+.....|            -..++||+|++|++.|.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p------~p~~~~~F------------~~~~KPYrCevC~KRYK  409 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP------SPEKMNIF------------SAKDKPYRCEVCDKRYK  409 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCC------Cccccccc------------cccCCceeccccchhhc
Confidence            8999997  9999999999999998 45433333111      11111222            23478999999999999


Q ss_pred             CCCCccccccc
Q 021090           79 LRNNPKKSFRF   89 (317)
Q Consensus        79 ~~~~l~~H~~~   89 (317)
                      .-..|+-|.+-
T Consensus       410 NlNGLKYHr~H  420 (423)
T COG5189         410 NLNGLKYHRKH  420 (423)
T ss_pred             cCccceecccc
Confidence            99999988653

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.37  E-value=1.9e-05  Score=48.03  Aligned_cols=30  Identities=20%  Similarity=0.496  Sum_probs=22.4

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHP   31 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~   31 (317)
                      +|..|++|+..+.+..+|++|+.++++.||
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            577899999999999999999998888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.35  E-value=6.1e-05  Score=39.83  Aligned_cols=24  Identities=50%  Similarity=0.873  Sum_probs=16.3

Q ss_pred             ccCCccccccCCcccccchhhhcc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            567777777777777777766654

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=97.23  E-value=7e-05  Score=61.14  Aligned_cols=51  Identities=29%  Similarity=0.442  Sum_probs=45.3

Q ss_pred             eechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccch-hhhccCcc
Q 021090          209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGH-KRSHLLAN  274 (317)
Q Consensus       209 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H-~~~H~~~~  274 (317)
                      -.|.+|++.|-....|..|+               ..|-|+|.+|.|..-+.--|.+| |++|...-
T Consensus        11 pwcwycnrefddekiliqhq---------------kakhfkchichkkl~sgpglsihcmqvhketi   62 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQ---------------KAKHFKCHICHKKLFSGPGLSIHCMQVHKETI   62 (341)
T ss_pred             ceeeecccccchhhhhhhhh---------------hhccceeeeehhhhccCCCceeehhhhhhhhh
Confidence            36999999999999999998               46679999999999999999999 89997653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.18  E-value=0.0001  Score=39.66  Aligned_cols=24  Identities=33%  Similarity=0.679  Sum_probs=21.6

Q ss_pred             CCCCCcccCcCCCccccccccccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAH   26 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H   26 (317)
                      .|.|.+|++.|.+...|..|+++.
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCCcccCCCCcCCHHHHHHHHccC
Confidence            488999999999999999999964

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=97.00  E-value=0.00027  Score=55.78  Aligned_cols=41  Identities=22%  Similarity=0.532  Sum_probs=34.4

Q ss_pred             cceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCccc
Q 021090          207 GKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQA  262 (317)
Q Consensus       207 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~  262 (317)
                      -+|.|. |++   ....+.+|.++|+           |+++|.|..|+..|.....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~-----------g~~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVR-----------GEAVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhc-----------CCccEECCCCCceeEEecc
Confidence            369998 998   7778888987776           9999999999999976543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.99  E-value=0.00023  Score=43.42  Aligned_cols=31  Identities=23%  Similarity=0.416  Sum_probs=22.0

Q ss_pred             CCccccCCccccccCCcccccchhhhccCcc
Q 021090          244 DEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       244 ~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      .+.|-.|++|+..+.+..+|.+|+.++++.+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            5789999999999999999999997766554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.97  E-value=5.8e-05  Score=39.79  Aligned_cols=23  Identities=30%  Similarity=0.803  Sum_probs=21.5

Q ss_pred             CCCCcccCcCCCccccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAH   26 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H   26 (317)
                      |.|.+|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999975

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.84  E-value=0.00012  Score=53.24  Aligned_cols=72  Identities=18%  Similarity=0.120  Sum_probs=21.6

Q ss_pred             CCCcccCcCCCccccccccccccCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCCc
Q 021090            5 KCKLCTRSFSNGRALGGHMKAHLAA-HPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNP   83 (317)
Q Consensus         5 ~C~~Cgk~F~~~~~L~~H~r~H~~e-k~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l   83 (317)
                      .|.+|+..|.+...|..||+..++. .+-             .........+..+.... ....+.|..|+..|.....|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~-------------~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l   66 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPD-------------QKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREAL   66 (100)
T ss_dssp             --------------------------------------------------------------SSEEBSSSS-EESSHHHH
T ss_pred             Ccccccccccccccccccccccccccccc-------------ccccccccccccccccc-cCCCCCCCccCCCCcCHHHH
Confidence            5999999999999999999854432 221             00011111222222111 12268999999999999999


Q ss_pred             ccccccc
Q 021090           84 KKSFRFA   90 (317)
Q Consensus        84 ~~H~~~~   90 (317)
                      ..||+.+
T Consensus        67 ~~Hm~~~   73 (100)
T PF12756_consen   67 QEHMRSK   73 (100)
T ss_dssp             HHHHHHT
T ss_pred             HHHHcCc
Confidence            9999865

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.78  E-value=0.00024  Score=37.34  Aligned_cols=23  Identities=43%  Similarity=0.759  Sum_probs=15.6

Q ss_pred             ccCCccccccCCcccccchhhhc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H  270 (317)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            55777777777777777776654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.55  E-value=0.014  Score=53.99  Aligned_cols=60  Identities=27%  Similarity=0.461  Sum_probs=54.0

Q ss_pred             cceechhhhhhccCccchhhhhh--hhhcccccccccccCC--ccccCC--ccccccCCcccccchhhhccCcccch
Q 021090          207 GKYRCEKCKKAFRSYHALGGHKK--VCETNINAGTKVAADE--KIFECP--FCYKVFGSGQALGGHKRSHLLANSSS  277 (317)
Q Consensus       207 ~~~~C~~C~k~f~~~~~L~~H~~--~H~~~~~~H~~~h~~e--kpf~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~  277 (317)
                      .++.|..|...|.....|.+|++  .|.           ++  +||.|+  .|++.|.+...|..|..+|++.....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-----------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-----------GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAK  353 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-----------cccCCceeeeccCCCccccccccccCCcccccCCCccc
Confidence            47999999999999999999997  554           88  999999  89999999999999999999887433

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.50  E-value=0.0089  Score=55.25  Aligned_cols=63  Identities=21%  Similarity=0.203  Sum_probs=57.0

Q ss_pred             CCCCCcccCcCCCccccccccc--cccCC--CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCccccCCCCCccCcC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK--AHLAA--HPLPPKTNQQQQPS--DSTESASTSSSSSGEGVEVKGKSPEVAEEK   73 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r--~H~~e--k~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c   73 (317)
                      ++.|..|...|.+...|.+|.+  .|+++  +|+        .|.  .|+..|.....+.+|...+.....+.|...
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~--------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPF--------SCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLL  357 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCce--------eeeccCCCccccccccccCCcccccCCCccccccc
Confidence            6899999999999999999999  89999  999        888  899999999999999999998888777543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.44  E-value=0.00088  Score=35.92  Aligned_cols=22  Identities=41%  Similarity=0.671  Sum_probs=16.4

Q ss_pred             ccCCccccccCCcccccchhhh
Q 021090          248 FECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      |.|.+|++.|.....|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6677777777777777777765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.39  E-value=0.00026  Score=36.87  Aligned_cols=23  Identities=39%  Similarity=0.569  Sum_probs=19.0

Q ss_pred             CCCCcccCcCCCcccccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      |+|+.|+.... ++.|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999999998 999999999865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.32  E-value=0.0008  Score=34.96  Aligned_cols=23  Identities=26%  Similarity=0.598  Sum_probs=13.7

Q ss_pred             ccCCccccccCCcccccchhhhcc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      |+|+.|+.... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777776666 666777766643

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.97  E-value=0.0014  Score=34.44  Aligned_cols=21  Identities=38%  Similarity=0.684  Sum_probs=18.4

Q ss_pred             CCCCcccCcCCCcccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      .+|+.||+.| ....|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 78999999864

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=95.46  E-value=0.012  Score=59.74  Aligned_cols=76  Identities=13%  Similarity=0.065  Sum_probs=51.0

Q ss_pred             ccccccccccCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCcc-ccCCCCCccCcCCCCCCCCCCccccccccCCc
Q 021090           18 ALGGHMKAHLAAHPL-PPKTNQQQQPSDSTESASTSSSSSGEGVE-VKGKSPEVAEEKSLGYGLRNNPKKSFRFADPE   93 (317)
Q Consensus        18 ~L~~H~r~H~~ek~~-~~~~~~~~~c~~c~~~~~~~~~l~~h~~~-~~~~~~~~C~~c~~~f~~~~~l~~H~~~~~~~   93 (317)
                      .+..|++.++..-.- ......-..|..|...+.....+.+++.. ++..+.|+|+.|...|.....|--|||..|+.
T Consensus       414 ~~~~~s~~~~~~~t~ee~~~~~l~e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~  491 (1406)
T KOG1146|consen  414 ASDQHSNENTSSETKEEEDRGTLVELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPE  491 (1406)
T ss_pred             cCcCCcccCCCccccccCCCCccccccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccc
Confidence            345666666543210 02222333455566666666677776544 56668999999999999999999999987773

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.93  E-value=0.0083  Score=31.43  Aligned_cols=20  Identities=30%  Similarity=0.780  Sum_probs=12.7

Q ss_pred             ccCCccccccCCcccccchhh
Q 021090          248 FECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~  268 (317)
                      ..|++||+.| ....|.+|++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4577777777 5556666654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.69  E-value=0.0072  Score=34.47  Aligned_cols=24  Identities=29%  Similarity=0.677  Sum_probs=21.9

Q ss_pred             CCCCCCcccCcCCCcccccccccc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      -+|.|.+|++.|.+...|..|++.
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            478999999999999999999884

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=94.55  E-value=0.0029  Score=60.35  Aligned_cols=26  Identities=35%  Similarity=0.781  Sum_probs=19.4

Q ss_pred             CCCCCcccCcCC---------------Cccccccccc-cccC
Q 021090            3 KHKCKLCTRSFS---------------NGRALGGHMK-AHLA   28 (317)
Q Consensus         3 ~~~C~~Cgk~F~---------------~~~~L~~H~r-~H~~   28 (317)
                      .+.|.+|++.|.               +...|+.||+ .|..
T Consensus        99 ~~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~  140 (669)
T KOG2231|consen   99 HHSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKL  140 (669)
T ss_pred             hhhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhh
Confidence            367888888874               7788999986 6754

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.05  E-value=0.016  Score=58.79  Aligned_cols=70  Identities=17%  Similarity=0.254  Sum_probs=53.6

Q ss_pred             ccCcceechhhhhhccCccchhhhhhhhhccc--------ccccc------cccCCccccCCccccccCCcccccchhh-
Q 021090          204 LTRGKYRCEKCKKAFRSYHALGGHKKVCETNI--------NAGTK------VAADEKIFECPFCYKVFGSGQALGGHKR-  268 (317)
Q Consensus       204 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~--------~~H~~------~h~~ekpf~C~~C~k~F~~~~~L~~H~~-  268 (317)
                      .-.+.|+|..|+-.|+....|..|||.-+-+-        +.|.+      --.+.+||.|..|..+|..+.+|-+|++ 
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            34578999999999999999999999722111        22222      2234579999999999999999999987 


Q ss_pred             -hccCc
Q 021090          269 -SHLLA  273 (317)
Q Consensus       269 -~H~~~  273 (317)
                       .|..+
T Consensus       541 ~~h~~~  546 (1406)
T KOG1146|consen  541 DLHRNE  546 (1406)
T ss_pred             HhhHHH
Confidence             46655

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.81  E-value=0.018  Score=32.71  Aligned_cols=22  Identities=23%  Similarity=0.516  Sum_probs=17.1

Q ss_pred             cccCCccccccCCcccccchhh
Q 021090          247 IFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      +|.|++|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4778888888887777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=91.65  E-value=0.0052  Score=54.12  Aligned_cols=64  Identities=25%  Similarity=0.239  Sum_probs=47.2

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhccc---------ccccccccCC---ccccCCccc---cccCCcccccchhh
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNI---------NAGTKVAADE---KIFECPFCY---KVFGSGQALGGHKR  268 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~---------~~H~~~h~~e---kpf~C~~C~---k~F~~~~~L~~H~~  268 (317)
                      ..-|-.|-+|++.|..-..-..||..++|-.         ..++..-.|+   +-|.|-+|+   +.|.+-...+.||+
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            3445779999999999999999999887544         1111111222   248999999   99999999999985

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=91.06  E-value=0.08  Score=44.19  Aligned_cols=52  Identities=19%  Similarity=0.346  Sum_probs=34.5

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcc--cccccccccCCcc-----ccCCccccccCCc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETN--INAGTKVAADEKI-----FECPFCYKVFGSG  260 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~--~~~H~~~h~~ekp-----f~C~~C~k~F~~~  260 (317)
                      ++.+.|++|++.|.++..+....+.-..+  ...   .-.+.-|     ..|+.||.+|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~---~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCP---RYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCcc---ccCCCCCeeeeEEECCCCCCccccc
Confidence            46789999999999998888776542100  000   0112223     6899999999866

>KOG4167 consensus Predicted DNA-binding protein, contains SANT and ELM2 domains [Transcription]

Probab=90.49  E-value=0.037  Score=52.85  Aligned_cols=28  Identities=32%  Similarity=0.497  Sum_probs=25.9

Q ss_pred             cccCCccccccCCcccccchhhhccCcc
Q 021090          247 IFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      -|.|..|+|.|-.-..+..||++|.-..
T Consensus       792 iFpCreC~kvF~KiKSrNAHMK~Hr~q~  819 (907)
T KOG4167|consen  792 IFPCRECGKVFFKIKSRNAHMKTHRQQE  819 (907)
T ss_pred             eeehHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            4999999999999999999999998765

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.00  E-value=0.23  Score=41.48  Aligned_cols=24  Identities=21%  Similarity=0.671  Sum_probs=21.4

Q ss_pred             CCCCCCcccCcCCCcccccccccc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      |.+.||+|++.|.++.-+....|+
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~   27 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRV   27 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceE
Confidence            678999999999999998888874

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.37  E-value=0.18  Score=37.23  Aligned_cols=62  Identities=19%  Similarity=0.307  Sum_probs=43.6

Q ss_pred             cceechhhhhhccCccchhhhhhh-hhccc---------------------------------ccccccccCCccccC--
Q 021090          207 GKYRCEKCKKAFRSYHALGGHKKV-CETNI---------------------------------NAGTKVAADEKIFEC--  250 (317)
Q Consensus       207 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~---------------------------------~~H~~~h~~ekpf~C--  250 (317)
                      +-.-|..|+....- +.+..|++. |....                                 ..++.++.   -|.|  
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~---G~~C~~   85 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYD---GYRCQC   85 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCC---Ceeeec
Confidence            45678888877666 778888884 32111                                 12222332   3999  


Q ss_pred             --CccccccCCcccccchhhhccC
Q 021090          251 --PFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       251 --~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                        ..|++.+.+...+.+|++.++|
T Consensus        86 ~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   86 DPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCCCCcEeccHHHHHHHHHHhcC
Confidence              9999999999999999987654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=87.00  E-value=1.7  Score=31.98  Aligned_cols=86  Identities=9%  Similarity=0.025  Sum_probs=55.2

Q ss_pred             CCCCCcccCcCCCccccccccccccCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPK----TNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYG   78 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~----~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~   78 (317)
                      |-.|++||-.-.+...|.|--..=-..++|...    ......|..|...|+........  .......|.|+.|...|-
T Consensus        15 P~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~--~~~~~~~y~C~~C~~~FC   92 (112)
T TIGR00622        15 PVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD--ELKDSHRYVCAVCKNVFC   92 (112)
T ss_pred             CCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccccc--ccccccceeCCCCCCccc
Confidence            567999999988888887653221224445422    22234599999999865322211  123345899999999998


Q ss_pred             CCCCcccccccc
Q 021090           79 LRNNPKKSFRFA   90 (317)
Q Consensus        79 ~~~~l~~H~~~~   90 (317)
                      ..-+.--|-.+|
T Consensus        93 ~dCD~fiHe~Lh  104 (112)
T TIGR00622        93 VDCDVFVHESLH  104 (112)
T ss_pred             cccchhhhhhcc
Confidence            877777775444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00614 ZnF_BED BED zinc finger

Probab=86.31  E-value=0.16  Score=31.57  Aligned_cols=23  Identities=35%  Similarity=0.758  Sum_probs=19.6

Q ss_pred             CCCcccCcCCCc-----cccccccc-ccc
Q 021090            5 KCKLCTRSFSNG-----RALGGHMK-AHL   27 (317)
Q Consensus         5 ~C~~Cgk~F~~~-----~~L~~H~r-~H~   27 (317)
                      .|.+|++.+...     +.|.+|++ +|.
T Consensus        20 ~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       20 KCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            499999999887     59999998 675

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=85.84  E-value=0.35  Score=29.40  Aligned_cols=31  Identities=19%  Similarity=0.526  Sum_probs=22.8

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCC
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGS  259 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~  259 (317)
                      .|.|..||..|....                     ....+.|+.||..+..
T Consensus         3 ~y~C~~CG~~~~~~~---------------------~~~~~~Cp~CG~~~~~   33 (46)
T PRK00398          3 EYKCARCGREVELDE---------------------YGTGVRCPYCGYRILF   33 (46)
T ss_pred             EEECCCCCCEEEECC---------------------CCCceECCCCCCeEEE
Confidence            589999998877654                     1226899999976653

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=85.70  E-value=0.43  Score=26.95  Aligned_cols=10  Identities=30%  Similarity=0.717  Sum_probs=8.5

Q ss_pred             ccccCCcccc
Q 021090          246 KIFECPFCYK  255 (317)
Q Consensus       246 kpf~C~~C~k  255 (317)
                      .|..|++||.
T Consensus        17 ~p~~CP~Cg~   26 (34)
T cd00729          17 APEKCPICGA   26 (34)
T ss_pred             CCCcCcCCCC
Confidence            5789999986

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=85.28  E-value=0.41  Score=29.39  Aligned_cols=30  Identities=20%  Similarity=0.696  Sum_probs=21.8

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKV  256 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~  256 (317)
                      ...|.|..||+.|....                     ......|+.||..
T Consensus         4 ~~~Y~C~~Cg~~~~~~~---------------------~~~~irCp~Cg~r   33 (49)
T COG1996           4 MMEYKCARCGREVELDQ---------------------ETRGIRCPYCGSR   33 (49)
T ss_pred             eEEEEhhhcCCeeehhh---------------------ccCceeCCCCCcE
Confidence            35699999999992111                     4557899999864

>KOG4124 consensus Putative transcriptional repressor regulating G2/M transition [Transcription; Cell cycle control, cell division, chromosome partitioning]

Probab=84.48  E-value=0.5  Score=41.40  Aligned_cols=64  Identities=23%  Similarity=0.441  Sum_probs=48.3

Q ss_pred             cCcceechh--hhhhccCccchhhhhhh-hhccc-------ccccccccCCccccCCccccccCCcccccchhh
Q 021090          205 TRGKYRCEK--CKKAFRSYHALGGHKKV-CETNI-------NAGTKVAADEKIFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       205 ~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~~~~-------~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      ..++|+|.+  |++.+....-|+.|... |.+..       ..|...-...|||+|++|.+++...-.|+-|+.
T Consensus       346 ~~~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~~~s~~~~ph~~~~~~nk~~r~~i~~~~~k~~~~l~~~~~  419 (442)
T KOG4124|consen  346 VDKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNGLKYHRT  419 (442)
T ss_pred             ecCCCCCCCCcchhhcccCcceeeccccCcCCCCCCCCCCCCCcceeeeccCcccChhhhhhhccCCCCCceee
Confidence            568999976  99999999999888543 32222       455555566899999999999988777766654

>KOG2071 consensus mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11 [RNA processing and modification]

Probab=83.16  E-value=0.67  Score=43.77  Aligned_cols=28  Identities=14%  Similarity=0.389  Sum_probs=24.7

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhh
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .+.+..|..||..|........||.+|.
T Consensus       415 ~~~pnqC~~CG~R~~~~ee~sk~md~H~  442 (579)
T KOG2071|consen  415 KDSPNQCKSCGLRFDDSEERSKHMDIHD  442 (579)
T ss_pred             cCCcchhcccccccccchhhhhHhhhhh
Confidence            5678999999999999999988888774

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.94  E-value=0.67  Score=34.01  Aligned_cols=33  Identities=24%  Similarity=0.552  Sum_probs=26.2

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCccc
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQA  262 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~  262 (317)
                      ...|..||+.|---                      +..|-.|+.||..|.....
T Consensus         9 KR~Cp~CG~kFYDL----------------------nk~PivCP~CG~~~~~~~~   41 (108)
T PF09538_consen    9 KRTCPSCGAKFYDL----------------------NKDPIVCPKCGTEFPPEPP   41 (108)
T ss_pred             cccCCCCcchhccC----------------------CCCCccCCCCCCccCcccc
Confidence            35799999998543                      3569999999999998733

The function of members of this family is unknown.

>PRK04860 hypothetical protein; Provisional

Probab=82.29  E-value=0.21  Score=39.55  Aligned_cols=10  Identities=10%  Similarity=-0.004  Sum_probs=5.9

Q ss_pred             CCCCCCCCCC
Q 021090           41 QPSDSTESAS   50 (317)
Q Consensus        41 ~c~~c~~~~~   50 (317)
                      .|..|+..+.
T Consensus       145 rC~~C~~~l~  154 (160)
T PRK04860        145 RCRRCGETLV  154 (160)
T ss_pred             ECCCCCceeE
Confidence            6666665544

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=82.17  E-value=0.46  Score=27.48  Aligned_cols=34  Identities=26%  Similarity=0.548  Sum_probs=24.4

Q ss_pred             eechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccC
Q 021090          209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFG  258 (317)
Q Consensus       209 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~  258 (317)
                      +.|..|+..|.-......-                +...+.|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~~~----------------~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLGA----------------NGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHcCC----------------CCCEEECCCCCCEEE
Confidence            6799999998877654321                223588999998874

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=82.00  E-value=0.76  Score=38.52  Aligned_cols=47  Identities=21%  Similarity=0.575  Sum_probs=35.6

Q ss_pred             eechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhh
Q 021090          209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       209 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      |.|..||....... |.+|+-...           + .-|.|-.||+.|.. -.+..|...
T Consensus         4 FtCnvCgEsvKKp~-vekH~srCr-----------n-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQ-VEKHMSRCR-----------N-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             Eehhhhhhhccccc-hHHHHHhcc-----------C-CeeEEeeccccccc-chhhhhhhh
Confidence            78999998877654 666887664           4 57999999999988 555677653

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=81.47  E-value=1.2  Score=24.93  Aligned_cols=13  Identities=23%  Similarity=0.636  Sum_probs=9.3

Q ss_pred             CCCCCcccCcCCC
Q 021090            3 KHKCKLCTRSFSN   15 (317)
Q Consensus         3 ~~~C~~Cgk~F~~   15 (317)
                      .|.|.+||..+.-
T Consensus         1 ~~~C~~CGy~y~~   13 (33)
T cd00350           1 KYVCPVCGYIYDG   13 (33)
T ss_pred             CEECCCCCCEECC
Confidence            3778888877654

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=81.00  E-value=0.46  Score=37.30  Aligned_cols=20  Identities=25%  Similarity=0.271  Sum_probs=14.9

Q ss_pred             ccccCCccccccCCcccccc
Q 021090          246 KIFECPFCYKVFGSGQALGG  265 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~  265 (317)
                      +.|+|+-||++|..--.+..
T Consensus        27 ~~~~c~~c~~~f~~~e~~~~   46 (154)
T PRK00464         27 RRRECLACGKRFTTFERVEL   46 (154)
T ss_pred             eeeeccccCCcceEeEeccC
Confidence            34999999999987655543

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=80.61  E-value=0.44  Score=25.09  Aligned_cols=20  Identities=20%  Similarity=0.614  Sum_probs=16.4

Q ss_pred             CCCCcccCcCCCccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMK   24 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r   24 (317)
                      ..||+|++.+ ....++.|+.
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            4699999999 5678888876

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=80.24  E-value=0.46  Score=29.68  Aligned_cols=27  Identities=26%  Similarity=0.469  Sum_probs=20.7

Q ss_pred             ccCCccccCCccccccCCcccccchhh
Q 021090          242 AADEKIFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       242 h~~ekpf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      ..||--+.|+-||+-|.......+|..
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhh
Confidence            347777888888888888877777764

>PHA00626 hypothetical protein

Probab=80.08  E-value=0.66  Score=29.10  Aligned_cols=17  Identities=12%  Similarity=0.063  Sum_probs=13.3

Q ss_pred             CccccCCccccccCCcc
Q 021090          245 EKIFECPFCYKVFGSGQ  261 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~  261 (317)
                      ...|+|+.||..|+...
T Consensus        21 snrYkCkdCGY~ft~~~   37 (59)
T PHA00626         21 SDDYVCCDCGYNDSKDA   37 (59)
T ss_pred             CcceEcCCCCCeechhh
Confidence            34699999999997643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	317
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-07
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 246 KIFECPFCYKVFGSGQALGGHKRSH 270
           + + C FC + F S QALGGH   H
Sbjct: 5   RSYTCSFCKREFRSAQALGGHMNVH 29

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 3  KHKCKLCTRSFSNGRALGGHMKAH 26
           + C  C R F + +ALGGHM  H
Sbjct: 6  SYTCSFCKREFRSAQALGGHMNVH 29

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 11/62 (17%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
             CE C K FR  + L  HK       ++G      EK + CP C   F     +  H R
Sbjct: 8   VACEICGKIFRDVYHLNRHKL-----SHSG------EKPYSCPVCGLRFKRKDRMSYHVR 56

Query: 269 SH 270
           SH
Sbjct: 57  SH 58

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 9/62 (14%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           YRC+ C + +        H           T    + K++ CPFC+K F     +  H +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYV---------TSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 269 SH 270
             
Sbjct: 62  II 63

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 11/62 (17%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           Y+C++C+ +FR    L  HK      ++ G      EK + C  C   F     L  H R
Sbjct: 18  YKCDRCQASFRYKGNLASHKT-----VHTG------EKPYRCNICGAQFNRPANLKTHTR 66

Query: 269 SH 270
            H
Sbjct: 67  IH 68

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 39.3 bits (93), Expect = 1e-04
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 11/62 (17%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           Y+C+ C  A     +L  H +     I++       E+ F+C  C     +   L  H R
Sbjct: 37  YKCKTCDYAAADSSSLNKHLR-----IHSD------ERPFKCQICPYASRNSSQLTVHLR 85

Query: 269 SH 270
           SH
Sbjct: 86  SH 87

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 11/62 (17%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           Y C+ C KAFR    L  H+      I++       EK F+C  C K F   + L  HK 
Sbjct: 46  YTCDICHKAFRRQDHLRDHRY-----IHSK------EKPFKCQECGKGFCQSRTLAVHKT 94

Query: 269 SH 270
            H
Sbjct: 95  LH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 37.4 bits (88), Expect = 8e-04
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 11/62 (17%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           + C+ C + F   + L  H++      +        E+ + C  C+K F     L  H+ 
Sbjct: 18  FICKFCGRHFTKSYNLLIHER-----THTD------ERPYTCDICHKAFRRQDHLRDHRY 66

Query: 269 SH 270
            H
Sbjct: 67  IH 68

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 30/278 (10%), Positives = 73/278 (26%), Gaps = 88/278 (31%)

Query: 26  HLAAHPLPPKTNQQQ----------QP-----------SDSTESASTSSSSSGEGVEVKG 64
           H   H +  +T + Q          +             D  +S  +      E   +  
Sbjct: 1   HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKE----EIDHIIM 56

Query: 65  KSPEVAEEKSLGYGLRNNPKKSF-RFAD----PEFSFAVDSGSVVVQDRESETESRNPTR 119
               V+    L + L +  ++   +F +      + F +       +     T      R
Sbjct: 57  SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116

Query: 120 RRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPV----SSVSDTSPEEDVAMCLMM- 174
            R   + ++F     ++  R              +P      ++ +  P ++V +  ++ 
Sbjct: 117 DRLYNDNQVFA---KYNVSR-------------LQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 175 -----LSRDV---------------WMRNNDEAQDHKIVEMVE----------ESEEIKL 204
                ++ DV               W+   +      ++EM++           S     
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 205 TRGKYRCEKCKKAFRSYHALGGHKK-------VCETNI 235
           +  K R    +   R       ++        V     
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 8/62 (12%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           + C KC K +     L  H+      +N        E++F C  C + F     L  H  
Sbjct: 36  FECPKCGKCYFRKENLLEHEA--RNCMNRS------EQVFTCSVCQETFRRRMELRLHMV 87

Query: 269 SH 270
           SH
Sbjct: 88  SH 89

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 8/62 (12%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
            +CE C    R   +L  H++       A          F C FC K F    ++  H+ 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRK-HAETVA-------ALRFPCEFCGKRFEKPDSVAAHRS 59

Query: 269 SH 270
             
Sbjct: 60  KS 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 11/62 (17%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           Y C +C KAF     L  H++     ++ G      EK ++C  C K F     L  H+R
Sbjct: 15  YGCVECGKAFSRSSILVQHQR-----VHTG------EKPYKCLECGKAFSQNSGLINHQR 63

Query: 269 SH 270
            H
Sbjct: 64  IH 65

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	317
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.82
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.67
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.67
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.65
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.63
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.62
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.62
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.62
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.58
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.57
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.56
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.56
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.55
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.55
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.55
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.54
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.54
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.54
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.53
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.53
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.49
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.48
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.48
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.47
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.47
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.47
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.46
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.45
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.44
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.44
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.41
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.38
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.36
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.35
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.35
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.35
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.34
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.32
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.32
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.31
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.3
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.29
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.28
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.28
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.26
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.26
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.22
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.22
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.21
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.2
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.19
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.19
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.17
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.12
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.1
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.1
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	99.1
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.1
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.05
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.03
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.03
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.02
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.02
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.01
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.01
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.01
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.01
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.01
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.01
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.98
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.97
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.95
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.95
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.94
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.94
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.94
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.92
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.91
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.88
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.87
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.36
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.35
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.81
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.81
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.79
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.78
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.78
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.78
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.77
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.77
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.76
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.76
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.76
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.21
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.72
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.72
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.71
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.71
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.7
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.69
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.69
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.65
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.65
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.63
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.62
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.62
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.62
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.62
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.6
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.6
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.6
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.6
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.59
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.99
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.57
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.57
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.57
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.55
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.96
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.54
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.53
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.52
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.51
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.51
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.46
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.43
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.38
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.38
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.36
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.34
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.25
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.38
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.17
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.77
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.61
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.31
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.81
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.48
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.28
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.14
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	92.99
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.29
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.92
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.13
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	87.89
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.17
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	85.41

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=5.9e-34  Score=233.83  Aligned_cols=169  Identities=23%  Similarity=0.372  Sum_probs=136.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRN   81 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~   81 (317)
                      ++|.|++|++.|.+...|..|+++|+++++|        .|..|+..|.+...|..|+..|.+.++|.|+.|+..|....
T Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   91 (190)
T 2i13_A           20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPY--------KCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRA   91 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC---CCE--------ECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHcCCCCCc--------cCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHH
Confidence            6899999999999999999999999999999        99999999999999999999999999999999999999999


Q ss_pred             CccccccccCCccccccCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhcCCCCCCCCCCCCCCCCCCC
Q 021090           82 NPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSD  161 (317)
Q Consensus        82 ~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (317)
                      .|.+|++.+.+                  +..+.|+.|+..|....                                  
T Consensus        92 ~l~~H~~~h~~------------------~~~~~C~~C~~~f~~~~----------------------------------  119 (190)
T 2i13_A           92 NLRAHQRTHTG------------------EKPYACPECGKSFSQLA----------------------------------  119 (190)
T ss_dssp             HHHHHHHHHHT------------------CCCEECTTTCCEESSHH----------------------------------
T ss_pred             HHHHHHHhcCC------------------CCCCcCCCCCCccCCHH----------------------------------
Confidence            99999988765                  33466777777665542                                  


Q ss_pred             CChhhHHHHHHhhhcccccccCCchhhhhHHHhhhhhhhhhhccCcceechhhhhhccCccchhhhhhhhhccccccccc
Q 021090          162 TSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKV  241 (317)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~  241 (317)
                                                       .+..|.+.|.++++|.|.+|++.|.+...|..|+++|+         
T Consensus       120 ---------------------------------~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~---------  157 (190)
T 2i13_A          120 ---------------------------------HLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT---------  157 (190)
T ss_dssp             ---------------------------------HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH---------
T ss_pred             ---------------------------------HHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcC---------
Confidence                                             34567777889999999999999999999999998877         


Q ss_pred             ccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          242 AADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       242 h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                        +++||.|++|++.|.+...|..|+++|+++.
T Consensus       158 --~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          158 --GEKPYKCPECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             --CCCCEECTTTCCEESSHHHHHHHHTTC----
T ss_pred             --CCCCeECCCCCCccCCHHHHHHHHHhcCCCC
Confidence              8999999999999999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=2e-29  Score=206.82  Aligned_cols=167  Identities=15%  Similarity=0.199  Sum_probs=144.5

Q ss_pred             CCCCC--CcccCcCCCccccccccccccCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCccccCCCCCccC--cCCC
Q 021090            2 EKHKC--KLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQP--SDSTESASTSSSSSGEGVEVKGKSPEVAE--EKSL   75 (317)
Q Consensus         2 k~~~C--~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c--~~c~~~~~~~~~l~~h~~~~~~~~~~~C~--~c~~   75 (317)
                      ++|.|  +.||+.|.+...|..|+++|+++++|        .|  ..|+..|.+...|..|+..|.+.++|.|+  .|+.
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~--------~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~   82 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPF--------PCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDL   82 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSS--------CCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCC
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCc--------cCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCC
Confidence            68999  68999999999999999999999999        99  88999999999999999999999999999  8999


Q ss_pred             CCCCCCCccccccccCCccccccCCCCeeecCCcccccccC--CCcccccccccccchhhhhhhhhhhcCCCCCCCCCCC
Q 021090           76 GYGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRN--PTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEP  153 (317)
Q Consensus        76 ~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (317)
                      .|.....|.+|++..+..                .+..+.|  ..|+..|...                           
T Consensus        83 ~f~~~~~l~~H~~~~h~~----------------~~~~~~C~~~~C~k~f~~~---------------------------  119 (190)
T 1tf6_A           83 RFTTKANMKKHFNRFHNI----------------KICVYVCHFENCGKAFKKH---------------------------  119 (190)
T ss_dssp             EESCHHHHHHHHHTTSST----------------TTSCCEECSSSSCEECSSH---------------------------
T ss_pred             ccCCHHHHHHHHHHhcCC----------------CcceeeCCCCCCccccCCH---------------------------
Confidence            999999999999544420                0223556  5666666554                           


Q ss_pred             CCCCCCCCCChhhHHHHHHhhhcccccccCCchhhhhHHHhhhhhhhhhhccCcceechh--hhhhccCccchhhhhhhh
Q 021090          154 EPVSSVSDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEK--CKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H  231 (317)
                                                              ..+..|.++|.++++|.|.+  |++.|.+...|..|+++|
T Consensus       120 ----------------------------------------~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H  159 (190)
T 1tf6_A          120 ----------------------------------------NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH  159 (190)
T ss_dssp             ----------------------------------------HHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSS
T ss_pred             ----------------------------------------HHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHh
Confidence                                                    23467788888999999988  999999999999999877


Q ss_pred             hcccccccccccCCccccCCc---cccccCCcccccchhhhccCc
Q 021090          232 ETNINAGTKVAADEKIFECPF---CYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       232 ~~~~~~H~~~h~~ekpf~C~~---C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +           |   |.|.+   |++.|.+...|..|+++|+++
T Consensus       160 ~-----------~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          160 A-----------G---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             C-----------S---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             C-----------C---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            5           5   99999   999999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=4e-27  Score=186.53  Aligned_cols=144  Identities=19%  Similarity=0.250  Sum_probs=121.6

Q ss_pred             CCCCCCcccCcCCCccccccccc---cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCc--CCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMK---AHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEE--KSLG   76 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r---~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~--c~~~   76 (317)
                      .+|+|++|++.|.+...|..|++   +|.++++|.+...   .|..|+..|.+...|..|+..|.+.++|.|+.  |++.
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c---~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   78 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG---GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS   78 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBT---TCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCC
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCC---CccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCc
Confidence            47999999999999999999998   8999999922111   13344588888888899999999889999975  9988


Q ss_pred             CCCCCCccccccccCCccccccCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhcCCCCCCCCCCCCCC
Q 021090           77 YGLRNNPKKSFRFADPEFSFAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPV  156 (317)
Q Consensus        77 f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (317)
                      |.....|.+|++.+                                                                  
T Consensus        79 f~~~~~l~~H~~~h------------------------------------------------------------------   92 (155)
T 2gli_A           79 YSRLENLKTHLRSH------------------------------------------------------------------   92 (155)
T ss_dssp             CSSHHHHHHHHHHT------------------------------------------------------------------
T ss_pred             ccCHHHHHHHHHHc------------------------------------------------------------------
Confidence            88777776665443                                                                  


Q ss_pred             CCCCCCChhhHHHHHHhhhcccccccCCchhhhhHHHhhhhhhhhhhccCcceechh--hhhhccCccchhhhh-hhhhc
Q 021090          157 SSVSDTSPEEDVAMCLMMLSRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEK--CKKAFRSYHALGGHK-KVCET  233 (317)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~-~~H~~  233 (317)
                                                                     .++++|.|.+  |++.|.+...|..|+ ++|+ 
T Consensus        93 -----------------------------------------------~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-  124 (155)
T 2gli_A           93 -----------------------------------------------TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS-  124 (155)
T ss_dssp             -----------------------------------------------TTCCCEECCSTTCCCEESSSSTTHHHHHHTTC-
T ss_pred             -----------------------------------------------CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC-
Confidence                                                           3567899998  999999999999998 6665 


Q ss_pred             ccccccccccCCccccCCc--cccccCCcccccchhhhccC
Q 021090          234 NINAGTKVAADEKIFECPF--CYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       234 ~~~~H~~~h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H~~  272 (317)
                                +++||.|++  |++.|.+...|..|+++|+|
T Consensus       125 ----------~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          125 ----------NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ----------SCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ----------CCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                      899999999  99999999999999999975

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=4.7e-27  Score=192.60  Aligned_cols=170  Identities=18%  Similarity=0.267  Sum_probs=121.8

Q ss_pred             ccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCCccccccccCCccc
Q 021090           16 GRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFS   95 (317)
Q Consensus        16 ~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l~~H~~~~~~~~~   95 (317)
                      .+.|..|+++|.++++|        .|..|+..|.+...|..|+..|.+.++|.|+.|+..|.....|.+|++.+.+   
T Consensus         6 ~~~l~~h~~~~~~~~~~--------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---   74 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPY--------ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG---   74 (190)
T ss_dssp             ---------------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHC---
T ss_pred             hccchhhhhhcCCCCCC--------cCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC---
Confidence            56899999999999999        9999999999999999999999999999999999999999999999988765   


Q ss_pred             cccCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCChhhHHHHHHhhh
Q 021090           96 FAVDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMML  175 (317)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (317)
                                     +..+.|+.|+..|....                                                
T Consensus        75 ---------------~~~~~C~~C~~~f~~~~------------------------------------------------   91 (190)
T 2i13_A           75 ---------------EKPYKCPECGKSFSQRA------------------------------------------------   91 (190)
T ss_dssp             ---------------CCCEECTTTCCEESCHH------------------------------------------------
T ss_pred             ---------------CCCccCcccCCccCCHH------------------------------------------------
Confidence                           23466777777665542                                                


Q ss_pred             cccccccCCchhhhhHHHhhhhhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcccc
Q 021090          176 SRDVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYK  255 (317)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k  255 (317)
                                         .+..|...|.++++|.|.+|++.|.+...|..|+++|+           +++||.|++|++
T Consensus        92 -------------------~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~  141 (190)
T 2i13_A           92 -------------------NLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT-----------GEKPYKCPECGK  141 (190)
T ss_dssp             -------------------HHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH-----------CCCCEECTTTCC
T ss_pred             -------------------HHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC-----------CCCCeECCCCCc
Confidence                               23566777778899999999999999999999998877           899999999999


Q ss_pred             ccCCcccccchhhhccCcccchhhhhhhcccCCc
Q 021090          256 VFGSGQALGGHKRSHLLANSSSTAAAAAVVATDP  289 (317)
Q Consensus       256 ~F~~~~~L~~H~~~H~~~~~~~~a~~~~~~~~~~  289 (317)
                      .|.+...|..|+++|+++..-.....+..+....
T Consensus       142 ~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~  175 (190)
T 2i13_A          142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRD  175 (190)
T ss_dssp             EESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             ccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHH
Confidence            9999999999999999988777776666555443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=4.4e-25  Score=167.92  Aligned_cols=60  Identities=23%  Similarity=0.397  Sum_probs=54.2

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhh-hccCccc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR-SHLLANS  275 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~  275 (317)
                      ++++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|++ .|.++.+
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~s  123 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHT-----------GEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPSS  123 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHS-----------SSCSEECSSSCCEESSHHHHHHHHHHTSSCSSC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcC-----------CCCCccCCCccchhCCHHHHHHHHHHHCCCCCC
Confidence            4568999999999999999999998876           8999999999999999999999987 6777643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=2.9e-23  Score=156.70  Aligned_cols=60  Identities=27%  Similarity=0.563  Sum_probs=54.1

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccC--CccccccCCcccccchhhhc
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFEC--PFCYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C--~~C~k~F~~~~~L~~H~~~H  270 (317)
                      .+.|.++++|.|.+|++.|.+...|..|+++|+           +++||.|  ++||+.|.+...|..|+++|
T Consensus        58 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           58 QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT-----------GEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH-----------TCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHcCCCCCccCCccCchhCCHHHHHHHHHHhc-----------CCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            334446678999999999999999999998877           8999999  89999999999999999988

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=2.7e-23  Score=158.10  Aligned_cols=60  Identities=25%  Similarity=0.501  Sum_probs=51.6

Q ss_pred             cCcceechh--hhhhccCccchhhhhhhhhcccccccccccCCccccCC--ccccccCCcccccchhhhccCccc
Q 021090          205 TRGKYRCEK--CKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP--FCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       205 ~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~--~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      ++++|.|.+  |++.|.....|..|+++|+           +++||.|+  .|++.|.+...|..|+++|+++..
T Consensus        59 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           59 GEKPFQCTFEGCGKRFSLDFNLRTHVRIHT-----------GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             CCCCEECCSTTCCCEESCHHHHHHHHHHHH-----------CCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             CCCCeeCCCCCCcCccCCHHHHHHHHHHhC-----------CCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            557899976  9999999999999998877           89999996  499999999999999999998753

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=3.7e-22  Score=157.86  Aligned_cols=63  Identities=27%  Similarity=0.472  Sum_probs=56.6

Q ss_pred             hccCcceechh--hhhhccCccchhhhhhhhhcccccccccccCCccccCCc--cccccCCcccccchhhhccCcccc
Q 021090          203 KLTRGKYRCEK--CKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF--CYKVFGSGQALGGHKRSHLLANSS  276 (317)
Q Consensus       203 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H~~~~~~  276 (317)
                      |.++++|.|.+  |++.|.....|.+|+++|+           +++||.|++  |++.|.+...|..|+++|+++...
T Consensus        85 h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~-----------~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~  151 (155)
T 2rpc_A           85 HTGEKPFPCPFPGCGKIFARSENLKIHKRTHT-----------GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG  151 (155)
T ss_dssp             HHCCCSEECSCTTTCCEESCHHHHHHHHTTTC-----------SSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCS
T ss_pred             cCCCCcccCCcCCCCCccCCHHHHHHHHHhhC-----------CCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            33667899998  9999999999999997766           899999998  999999999999999999988643

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=3e-23  Score=159.45  Aligned_cols=124  Identities=14%  Similarity=0.030  Sum_probs=90.4

Q ss_pred             ccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCCccccccccCCccccc
Q 021090           18 ALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPEFSFA   97 (317)
Q Consensus        18 ~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l~~H~~~~~~~~~~~   97 (317)
                      .+..|.++|+|+++|        .|..|+..|.....|..|+.+|.++++|+|+.|++.|.....|.+|           
T Consensus         9 h~~h~~~~h~Gek~y--------~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H-----------   69 (133)
T 2lt7_A            9 HDDHYELIVDGRVYY--------ICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH-----------   69 (133)
T ss_dssp             CSSEEEEEETTEEEE--------EETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHH-----------
T ss_pred             HHhhceeecCCCcCe--------ECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhh-----------
Confidence            345556677777777        7777777777777777777777777777888888888777666555           


Q ss_pred             cCCCCeeecCCcccccccCCCcccccccccccchhhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCChhhHHHHHHhhhcc
Q 021090           98 VDSGSVVVQDRESETESRNPTRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSR  177 (317)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (317)
                                                                                                      
T Consensus        70 --------------------------------------------------------------------------------   69 (133)
T 2lt7_A           70 --------------------------------------------------------------------------------   69 (133)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCchhhhhHHHhhhhhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcccccc
Q 021090          178 DVWMRNNDEAQDHKIVEMVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVF  257 (317)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F  257 (317)
                                            .++|+++++|.|.+||+.|.+...|..|+++|+++.     -....++|+|.+|++.|
T Consensus        70 ----------------------~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~-----p~~~~k~~~C~~C~k~~  122 (133)
T 2lt7_A           70 ----------------------EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD-----PSGDSKLYRLHPCRSLQ  122 (133)
T ss_dssp             ----------------------HHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCC-----TTSSSCCEEECCCCSSC
T ss_pred             ----------------------ccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCC-----CCCCCCCeecCCCCchh
Confidence                                  344557789999999999999999999999886321     11234679999999877


Q ss_pred             CCcccccchhhhccCcc
Q 021090          258 GSGQALGGHKRSHLLAN  274 (317)
Q Consensus       258 ~~~~~L~~H~~~H~~~~  274 (317)
                      .       |+++|+++.
T Consensus       123 ~-------~~~~h~~ek  132 (133)
T 2lt7_A          123 I-------RQYAYLSDR  132 (133)
T ss_dssp             C-------CCCHHHHCC
T ss_pred             h-------hcccccccC
Confidence            5       555666553

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.82  E-value=4.9e-22  Score=162.62  Aligned_cols=142  Identities=17%  Similarity=0.200  Sum_probs=120.1

Q ss_pred             cCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCccccCCCCCcc--CcCCCCCCCCCCccccccccCCccccccCCCC
Q 021090           27 LAAHPLPPKTNQQQQP--SDSTESASTSSSSSGEGVEVKGKSPEVA--EEKSLGYGLRNNPKKSFRFADPEFSFAVDSGS  102 (317)
Q Consensus        27 ~~ek~~~~~~~~~~~c--~~c~~~~~~~~~l~~h~~~~~~~~~~~C--~~c~~~f~~~~~l~~H~~~~~~~~~~~~~~~~  102 (317)
                      ..+++|        .|  ..|+..|.+...|..|+..|.+.++|.|  +.|++.|.....|.+|++.+.+          
T Consensus         8 ~~~~~~--------~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------   69 (190)
T 1tf6_A            8 VVYKRY--------ICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG----------   69 (190)
T ss_dssp             --CCCC--------BCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT----------
T ss_pred             CCCcce--------eCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC----------
Confidence            346677        89  6899999999999999999999999999  8999999999999999998865          


Q ss_pred             eeecCCcccccccCC--CcccccccccccchhhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCChhhHHHHHHhhhccccc
Q 021090          103 VVVQDRESETESRNP--TRRRSKRNRKLFTAHQDHHQKRMLKKPNFLESPAEPEPVSSVSDTSPEEDVAMCLMMLSRDVW  180 (317)
Q Consensus       103 ~~~~~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (317)
                              +..+.|.  .|+..|.....|                                                   
T Consensus        70 --------~~~~~C~~~~C~~~f~~~~~l---------------------------------------------------   90 (190)
T 1tf6_A           70 --------EKNFTCDSDGCDLRFTTKANM---------------------------------------------------   90 (190)
T ss_dssp             --------CCCEECCSSSCCCEESCHHHH---------------------------------------------------
T ss_pred             --------CCceeCCCCCCCCccCCHHHH---------------------------------------------------
Confidence                    3346666  677777665433                                                   


Q ss_pred             ccCCchhhhhHHHhhhhhhh-hhh-ccCcceec--hhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc--cc
Q 021090          181 MRNNDEAQDHKIVEMVEESE-EIK-LTRGKYRC--EKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF--CY  254 (317)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~--C~  254 (317)
                                      ..|. ..| .+.++|.|  .+|++.|.+...|..|+++|+           +++||.|++  |+
T Consensus        91 ----------------~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~~~C~  143 (190)
T 1tf6_A           91 ----------------KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT-----------QQLPYECPHEGCD  143 (190)
T ss_dssp             ----------------HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS-----------SSCSSBCCSSSCC
T ss_pred             ----------------HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC-----------CCCCccCCCCCCC
Confidence                            3444 334 35678999  999999999999999998776           999999988  99


Q ss_pred             cccCCcccccchhhhccC
Q 021090          255 KVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       255 k~F~~~~~L~~H~~~H~~  272 (317)
                      +.|.+...|..|+++|++
T Consensus       144 k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          144 KRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             CBCSSHHHHHHHHTSSCS
T ss_pred             chhcCHHHHHHHHHHhCC
Confidence            999999999999999998

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=2.8e-21  Score=126.45  Aligned_cols=59  Identities=22%  Similarity=0.438  Sum_probs=55.2

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      ++||.|.+||+.|...+.|..|+++|+           |++||.|++||++|.+.+.|..|+++|+++.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht-----------~ekp~~C~~C~k~F~~~~~L~~H~~~Htgepa   60 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL-----------GYRPRSCPECGKCFRDQSEVNRHLKVHQNKPA   60 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH-----------TCCCEECTTTCCEESSHHHHHHHGGGGSCC--
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC-----------CCcCeECCCCCCCcCCHHHHHHHhCccCCCCC
Confidence            689999999999999999999998877           99999999999999999999999999999753

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.1e-20  Score=133.84  Aligned_cols=62  Identities=27%  Similarity=0.465  Sum_probs=56.4

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccch
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSS  277 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~  277 (317)
                      +.++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|+++|+++..++
T Consensus        33 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           33 GVKPYKCKTCDYAAADSSSLNKHLRIHS-----------DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHSC-----------CCCCEECSSSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             CCCCEeCCCCCCccCCHHHHHHHHHHhC-----------CCCCccCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            4457899999999999999999998776           8999999999999999999999999999987654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=1.6e-20  Score=144.21  Aligned_cols=63  Identities=25%  Similarity=0.361  Sum_probs=57.3

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      ++|+++++|.|.+|++.|.+...|..|+++|+           |++||.|++||++|.+...|..|+++|+++.
T Consensus        43 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           43 NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHT-----------GERRYQCLACGKSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             HHHHCCSCEECSSSSCEESSHHHHHHHHHHHH-----------TCCCEEESSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             HHcCCCCCeeCCccCeecccccchhhhccccC-----------CCccccCCCCCCCcCCHHHHHHHhHHhcCCC
Confidence            34447789999999999999999999998877           9999999999999999999999999998764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=7.4e-20  Score=137.11  Aligned_cols=58  Identities=17%  Similarity=0.171  Sum_probs=51.0

Q ss_pred             ceechhhhhhc--cCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccc
Q 021090          208 KYRCEKCKKAF--RSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSS  276 (317)
Q Consensus       208 ~~~C~~C~k~f--~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~  276 (317)
                      .+.|.+|++.|  .....|..|+++|+           +++||.|++|++.|.+...|..|+++|......
T Consensus        50 ~~~C~~C~~~f~f~~~~~l~~H~~~H~-----------~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           50 HETDNNNPKRWSKPRKRSLLEMEGKED-----------AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CCCCCCCCSCCSSCCCCCCCCCCCSCC-----------CCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             CccCCCCCcccccccHHHHHHHhhccC-----------CCcceECCCCCCccCCHHHHHHHHHHhCCcccC
Confidence            35599999999  99999999997665           999999999999999999999999988766443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=7.5e-20  Score=128.30  Aligned_cols=57  Identities=28%  Similarity=0.496  Sum_probs=51.3

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccC
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      ++++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|+++|+|
T Consensus        26 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           26 DTRPYPCQYCGKRFHQKSDMKKHTFIHT-----------GEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHHHH-----------TCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCeeCCcCChhhCCHHHHHHHHHHhc-----------CCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            4556789999999999999999998876           89999999999999999999999999975

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=1.8e-19  Score=128.78  Aligned_cols=59  Identities=24%  Similarity=0.510  Sum_probs=52.6

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +.++|.|.+|++.|.+...|..|+++|+           +++||.|++|++.|.+...|..|+++|+++.
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           31 GQKPFQCRICMRNFSRSDHLTTHIRTHT-----------GEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHH-----------CCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHHcC-----------CCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            4456889999999999999999998876           8999999999999999999999999999864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.1e-19  Score=143.56  Aligned_cols=78  Identities=19%  Similarity=0.194  Sum_probs=72.1

Q ss_pred             CCCCCCc-----ccCcCCCccccccccccccCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCccccCCCCCccCc--
Q 021090            2 EKHKCKL-----CTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSD--STESASTSSSSSGEGVEVKGKSPEVAEE--   72 (317)
Q Consensus         2 k~~~C~~-----Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~--   72 (317)
                      ++|.|++     |++.|.+...|.+|+++|++++||        .|..  |+..|.+...|..|+..|.+.++|.|+.  
T Consensus        33 ~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~--------~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~  104 (155)
T 2gli_A           33 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH--------KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEG  104 (155)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCC--------CCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTT
T ss_pred             cceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCc--------cCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCC
Confidence            5788775     359999999999999999999999        9985  9999999999999999999999999998  


Q ss_pred             CCCCCCCCCCccccc
Q 021090           73 KSLGYGLRNNPKKSF   87 (317)
Q Consensus        73 c~~~f~~~~~l~~H~   87 (317)
                      |++.|.....|.+|+
T Consensus       105 C~~~f~~~~~L~~H~  119 (155)
T 2gli_A          105 CSKAFSNASDRAKHQ  119 (155)
T ss_dssp             CCCEESSSSTTHHHH
T ss_pred             CCCccCCHHHHHHHH
Confidence            999999999998886

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.8e-19  Score=127.86  Aligned_cols=60  Identities=25%  Similarity=0.448  Sum_probs=53.3

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCC--ccccCCccccccCCcccccchhh-hccCccc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADE--KIFECPFCYKVFGSGQALGGHKR-SHLLANS  275 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~e--kpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~  275 (317)
                      ++++|.|.+|++.|.....|..|+++|+           ++  +||.|++|++.|.+...|..|++ +|.++.+
T Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~s   94 (95)
T 2yt9_A           32 GEKPYSCPVCGLRFKRKDRMSYHVRSHD-----------GSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPSS   94 (95)
T ss_dssp             SSCSEECSSSCCEESCHHHHHHHHHHHC-----------CCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCSC
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHHhc-----------CCCCCceECCCccchhCCHHHHHHHHHHhcCCCCC
Confidence            4467889999999999999999998886           55  99999999999999999999985 8987754

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=1.1e-18  Score=128.59  Aligned_cols=67  Identities=31%  Similarity=0.564  Sum_probs=59.2

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccchh
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSST  278 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~  278 (317)
                      +.|.++++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|+++|+++....+
T Consensus        38 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           38 RTHTDERPYTCDICHKAFRRQDHLRDHRYIHS-----------KEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSC-----------CCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HHcCCCCCcCCCCccchhCCHHHHHHHHHHhC-----------CCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            33445678999999999999999999997766           89999999999999999999999999999876543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.5e-18  Score=127.62  Aligned_cols=65  Identities=29%  Similarity=0.464  Sum_probs=57.3

Q ss_pred             hccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccchh
Q 021090          203 KLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSST  278 (317)
Q Consensus       203 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~  278 (317)
                      |.+.++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|+++|........
T Consensus        32 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   96 (110)
T 2csh_A           32 HLGLRPYGCGVCGKKFKMKHHLVGHMKIHT-----------GIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAK   96 (110)
T ss_dssp             HSCCCSEECTTTSCEESSSHHHHHHHTTTC-----------CCCCEECSSSCCEESCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHcC-----------CCCCeeCCCCcchhcCHHHHHHHHHHccccccchh
Confidence            335678999999999999999999997776           89999999999999999999999999987654443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.67  E-value=2.9e-18  Score=126.38  Aligned_cols=85  Identities=14%  Similarity=0.153  Sum_probs=81.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRN   81 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~   81 (317)
                      ++|.|++|++.|.+...|.+|+++|+++++|        .|..|+..|.....|..|+..|.++++|+|+.|+..|....
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   87 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPY--------TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSR   87 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCC--------BCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCc--------CCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHH
Confidence            6899999999999999999999999999999        99999999999999999999999999999999999999999


Q ss_pred             CccccccccCCcc
Q 021090           82 NPKKSFRFADPEF   94 (317)
Q Consensus        82 ~l~~H~~~~~~~~   94 (317)
                      .|.+|++.|.+..
T Consensus        88 ~L~~H~~~H~~~~  100 (106)
T 2ee8_A           88 TLAVHKTLHMQTS  100 (106)
T ss_dssp             HHHHHHHHTTSCC
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999998743

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.65  E-value=1.1e-17  Score=119.02  Aligned_cols=56  Identities=23%  Similarity=0.521  Sum_probs=50.0

Q ss_pred             cCcceech--hhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhcc
Q 021090          205 TRGKYRCE--KCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       205 ~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      +.++|.|.  .|++.|.....|..|+++|+           +++||.|++|++.|.....|..|+++|+
T Consensus        32 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           32 GEKPYHCDWDGCGWKFARSDELTRHYRKHT-----------GHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SSCCEECCSTTTCCEESSHHHHHHHHHHHH-----------CCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCCcCCCCCCCCCccCCHHHHHHHHHHcC-----------CCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            44567786  59999999999999998876           8999999999999999999999999995

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=8.6e-18  Score=124.11  Aligned_cols=58  Identities=22%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             cceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhh-hccCcccc
Q 021090          207 GKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR-SHLLANSS  276 (317)
Q Consensus       207 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~~  276 (317)
                      ++|.|.+|++.|.....|..|++ |+           +++||+|++|++.|.+...|..|++ +|.++...
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~-H~-----------~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHES-KC-----------EYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHH-HC-----------STGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHH-cC-----------CCCCccCccccchhCCHHHHHHHHHHHcCCCCCC
Confidence            46899999999999999999994 66           8999999999999999999999997 88877543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.65  E-value=1.2e-17  Score=121.68  Aligned_cols=64  Identities=22%  Similarity=0.418  Sum_probs=55.9

Q ss_pred             hhhhhhccCcceech--hhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccC
Q 021090          198 ESEEIKLTRGKYRCE--KCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      .|.+.|.+.++|.|.  .|++.|.....|.+|+++|+           +++||.|++|++.|.+...|..|+++|++
T Consensus        35 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           35 AHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT-----------GAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHT-----------SCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhC-----------CCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            344445566789996  69999999999999998876           89999999999999999999999999975

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.9e-17  Score=112.14  Aligned_cols=66  Identities=33%  Similarity=0.511  Sum_probs=61.0

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +.++|.++++|.|.+|++.|.....|..|+++|+           +++||+|++|++.|.+...|..|+++|+++..
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHT-----------GEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGG-----------CSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcC-----------CCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            4567889999999999999999999999998776           89999999999999999999999999998764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=8.7e-17  Score=120.22  Aligned_cols=85  Identities=11%  Similarity=0.067  Sum_probs=79.1

Q ss_pred             CCCCCCcccCcCCCcccccccccc--ccCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCccccCCCCCccCcCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKA--HLAAHPLPPKTNQQQQPSDSTESA--STSSSSSGEGVEVKGKSPEVAEEKSLGY   77 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~--H~~ek~~~~~~~~~~~c~~c~~~~--~~~~~l~~h~~~~~~~~~~~C~~c~~~f   77 (317)
                      ++|.|++|++.|.++..|.+|+++  |.+++++       ..|..|+..|  .....|..|+.+|.++++|.|+.|++.|
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~-------~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f   90 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH-------ETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF   90 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCC-------CCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBC
T ss_pred             CCEECCccCchhcCHHHHHHHHHHhCccccCCC-------ccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCcc
Confidence            789999999999999999999999  8888876       1499999998  8999999999999999999999999999


Q ss_pred             CCCCCccccccccCCc
Q 021090           78 GLRNNPKKSFRFADPE   93 (317)
Q Consensus        78 ~~~~~l~~H~~~~~~~   93 (317)
                      ..+..|++|++.++..
T Consensus        91 ~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           91 ESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             SSHHHHHHHHHHTTTT
T ss_pred             CCHHHHHHHHHHhCCc
Confidence            9999999999988763

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=3.3e-17  Score=119.00  Aligned_cols=70  Identities=27%  Similarity=0.464  Sum_probs=64.3

Q ss_pred             hhhhhhhhccCcceechhhhhhcc-CccchhhhhhhhhcccccccccccC-CccccCCccccccCCcccccchhhhccCc
Q 021090          196 VEESEEIKLTRGKYRCEKCKKAFR-SYHALGGHKKVCETNINAGTKVAAD-EKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       196 ~~~~~~~~~~~~~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~H~~~h~~-ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ...|.+.|.++++|.|.+|++.|. ....|.+|+++|+           + ++||.|++|++.|.++..|..|+++|+++
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~-----------~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ-----------KLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH-----------HHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc-----------CCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            357788899999999999999999 9999999998886           7 89999999999999999999999999987


Q ss_pred             ccc
Q 021090          274 NSS  276 (317)
Q Consensus       274 ~~~  276 (317)
                      ...
T Consensus        81 kp~   83 (98)
T 2gqj_A           81 KPS   83 (98)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.62  E-value=3.8e-18  Score=111.46  Aligned_cols=56  Identities=16%  Similarity=0.300  Sum_probs=44.3

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKG   64 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   64 (317)
                      .|||.|++|||.|.+++.|.+|+++|++++||        .|..|++.|.....|..|+.+|.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~--------~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPR--------SCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCE--------ECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCe--------ECCCCCCCcCCHHHHHHHhCccCC
Confidence            38999999999999999999999999999999        666666555555555555555544

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=6.6e-17  Score=113.43  Aligned_cols=63  Identities=24%  Similarity=0.434  Sum_probs=56.8

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchh-hhccCcc
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHK-RSHLLAN  274 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~-~~H~~~~  274 (317)
                      ..+...++|.|.+||+.|.++..|.+|+++|+           +++||.|++|+++|.++..|.+|+ ++|.+++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-----------~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLH-----------AAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTS-----------CSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhcc-----------CCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34457789999999999999999999998776           999999999999999999999996 6898875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.8e-16  Score=107.49  Aligned_cols=64  Identities=19%  Similarity=0.286  Sum_probs=58.5

Q ss_pred             hhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccc
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSS  276 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~  276 (317)
                      .+.++++|.|.+|++.|.....|.+|+++|+           +++||+|++|++.|.+...|..|+++|+++...
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHC-----------TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGC-----------CSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3568899999999999999999999998776           899999999999999999999999999987643

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=2.5e-16  Score=108.05  Aligned_cols=61  Identities=30%  Similarity=0.570  Sum_probs=57.0

Q ss_pred             hccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          203 KLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       203 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +.+.++|.|.+|++.|.....|..|+++|+           +++||+|++|++.|.+...|..|+++|+++.
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~-----------~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHT-----------GEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHC-----------CCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcC-----------CCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            447899999999999999999999998876           8999999999999999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.57  E-value=2.5e-16  Score=102.11  Aligned_cols=57  Identities=28%  Similarity=0.415  Sum_probs=50.2

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccC
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      ++++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHT-----------GEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHH-----------CCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcC-----------CCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            3579999999999999999999998877           89999999999999999999999999864

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.7e-16  Score=108.72  Aligned_cols=70  Identities=23%  Similarity=0.376  Sum_probs=61.6

Q ss_pred             hhhhhhhccCcceechhhhhhccCccchhhhhh-hhhcccccccccccCC-ccccCCccccccCCcccccchhhhccCcc
Q 021090          197 EESEEIKLTRGKYRCEKCKKAFRSYHALGGHKK-VCETNINAGTKVAADE-KIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       197 ~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~H~~~h~~e-kpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      ..|.++|+++++|.|.+|++.|.....|..|++ .|.           ++ +||+|++|++.|.+...|..|+++|.+..
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~-----------~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT-----------ENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS-----------SSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcC-----------CCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            467888999999999999999999999999997 443           54 89999999999999999999999877765


Q ss_pred             cch
Q 021090          275 SSS  277 (317)
Q Consensus       275 ~~~  277 (317)
                      .++
T Consensus        73 ~p~   75 (77)
T 2ct1_A           73 GPS   75 (77)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.1e-17  Score=124.11  Aligned_cols=85  Identities=15%  Similarity=0.187  Sum_probs=81.0

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLR   80 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~   80 (317)
                      .++|.| +|++.|.+...|.+|+++|+++++|        .|..|+..|.....|..|+..|.+.++|+|+.|++.|..+
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPY--------GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSE--------ECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCc--------cCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            378999 9999999999999999999999999        9999999999999999999999999999999999999999


Q ss_pred             CCccccccccCCcc
Q 021090           81 NNPKKSFRFADPEF   94 (317)
Q Consensus        81 ~~l~~H~~~~~~~~   94 (317)
                      ..|.+|++.++...
T Consensus        79 ~~l~~H~~~~~~~~   92 (110)
T 2csh_A           79 DSFHRHVTSCTKSY   92 (110)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccccc
Confidence            99999999887644

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.2e-16  Score=104.34  Aligned_cols=62  Identities=23%  Similarity=0.521  Sum_probs=56.3

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhhcccccccccc-cCCccccCCccccccCCcccccchhhhccC
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVA-ADEKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h-~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      ++|.++++|.|.+|++.|.....|..|++++          | ++++||.|++|++.|.+...|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~----------H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTS----------HKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHH----------SSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHH----------cCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4577899999999999999999999999873          2 389999999999999999999999998875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.55  E-value=6.5e-16  Score=100.15  Aligned_cols=56  Identities=25%  Similarity=0.508  Sum_probs=52.9

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      ||.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|+++|.++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-----------DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-----------SCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-----------CCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6899999999999999999998776           8999999999999999999999999998874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=5.6e-16  Score=109.38  Aligned_cols=80  Identities=20%  Similarity=0.302  Sum_probs=67.5

Q ss_pred             hhhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          196 VEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       196 ~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +..|.++|.++++|.|.+|++.|.....|.+|+++|+..       ...++||.|++|++.|.+...|..|+++|+++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~-------~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP-------NFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS-------SCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC-------cCCCcceECCCCCChhCCHHHHHHHHHHccCCCC
Confidence            356888999999999999999999999999999876410       0113899999999999999999999999999987


Q ss_pred             chhhhhh
Q 021090          276 SSTAAAA  282 (317)
Q Consensus       276 ~~~a~~~  282 (317)
                      ......+
T Consensus        76 ~~~~~~~   82 (86)
T 1x6h_A           76 VEGENSG   82 (86)
T ss_dssp             CCCCCCC
T ss_pred             cccCCCC
Confidence            7665544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=5.5e-16  Score=107.44  Aligned_cols=67  Identities=22%  Similarity=0.374  Sum_probs=56.5

Q ss_pred             hccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhh-hccCcccch
Q 021090          203 KLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR-SHLLANSSS  277 (317)
Q Consensus       203 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~  277 (317)
                      |+++++|.|.+|++.|.....|.+|+++|++.        .+++||.|++|++.|.+...|..|++ .|.+.....
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~--------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET--------VAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHH--------TTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc--------CCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            56899999999999999999999999888610        12899999999999999999999995 566554433

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7.2e-16  Score=106.57  Aligned_cols=63  Identities=30%  Similarity=0.581  Sum_probs=57.6

Q ss_pred             hhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .+.++++|.|.+|++.|.....|.+|+++|+           +++||.|++|++.|.+...|..|+++|+++..
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHT-----------GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC-----------CSCSEECSSSCCEESSHHHHHHHGGGSCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcC-----------CCcCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            3447899999999999999999999997776           89999999999999999999999999998753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.3e-15  Score=109.87  Aligned_cols=66  Identities=21%  Similarity=0.371  Sum_probs=59.3

Q ss_pred             hhhhhhhhccCcceechhhhhhc-cCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccch-hhhccCc
Q 021090          196 VEESEEIKLTRGKYRCEKCKKAF-RSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGH-KRSHLLA  273 (317)
Q Consensus       196 ~~~~~~~~~~~~~~~C~~C~k~f-~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H-~~~H~~~  273 (317)
                      +..+.+.+.++++|.|.+|++.| .....|..|+++|            +++||.|.+|||.|.++..|..| +++|++.
T Consensus        22 ~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h------------~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           22 EEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC------------KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             HHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH------------CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH------------CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            44566777789999999999999 9999999999654            79999999999999999999999 9999865

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.53  E-value=1.7e-16  Score=120.18  Aligned_cols=83  Identities=18%  Similarity=0.189  Sum_probs=69.4

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCccccCCCCCccC--cCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSD--STESASTSSSSSGEGVEVKGKSPEVAE--EKSLGY   77 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~--~c~~~f   77 (317)
                      ++|.|++|++.|.+...|..|+++|+++++|        .|..  |+..|.+...|..|+..|.++++|.|+  .|++.|
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  104 (124)
T 1ubd_C           33 RVHVCAECGKAFVESSKLKRHQLVHTGEKPF--------QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF  104 (124)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCCCCE--------ECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCe--------eCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCcc
Confidence            5788888888888888888888888888888        8875  888888888888888888888888885  488888


Q ss_pred             CCCCCccccccccCC
Q 021090           78 GLRNNPKKSFRFADP   92 (317)
Q Consensus        78 ~~~~~l~~H~~~~~~   92 (317)
                      .....|.+|++.+++
T Consensus       105 ~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C          105 AQSTNLKSHILTHAK  119 (124)
T ss_dssp             SSTTTTHHHHHHHC-
T ss_pred             CCHHHHHHHHHHHcc
Confidence            888888888887765

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.6e-15  Score=99.41  Aligned_cols=58  Identities=26%  Similarity=0.485  Sum_probs=53.2

Q ss_pred             cceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchh-hhccCccc
Q 021090          207 GKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHK-RSHLLANS  275 (317)
Q Consensus       207 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~-~~H~~~~~  275 (317)
                      ++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.+...|..|+ ++|.++.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~   59 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT-----------NEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLG   59 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT-----------SSCSEECTTTCCEESSHHHHHHHHTTTSCCSSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhC-----------CCCCccCCCCCCccCCHHHHHHHHHHHcCCcCC
Confidence            57999999999999999999998776           899999999999999999999996 78987653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.4e-15  Score=108.42  Aligned_cols=68  Identities=16%  Similarity=0.201  Sum_probs=59.0

Q ss_pred             ccCcceechhhhhhccCccchhhhhh-hhhcccccccccccCCccccCCccccccCCcccccch-hhhccCcccchhh
Q 021090          204 LTRGKYRCEKCKKAFRSYHALGGHKK-VCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGH-KRSHLLANSSSTA  279 (317)
Q Consensus       204 ~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H-~~~H~~~~~~~~a  279 (317)
                      +++++|.|.+||+.|...+.|.+|++ +|++        .++++||.|++||++|.++..|..| +++|+++..-...
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~--------~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPN--------VVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSS--------CCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCC--------CCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            48899999999999999999999997 4621        0368999999999999999999999 8999998765544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.1e-16  Score=116.62  Aligned_cols=80  Identities=10%  Similarity=-0.002  Sum_probs=74.9

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRN   81 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~   81 (317)
                      ++|.|++|++.|.+...|..|+++|  +++|        .|..|++.|.....|..|+. |.++++|+|+.|++.|....
T Consensus        15 ~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~--------~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A           15 EVYQCRLCNAKLSSLLEQGSHERLC--RNAA--------VCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHH--HHSB--------CCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHC--CCCc--------cCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH
Confidence            7899999999999999999999999  4789        99999999999999999995 99999999999999999999


Q ss_pred             Ccccccc-ccCC
Q 021090           82 NPKKSFR-FADP   92 (317)
Q Consensus        82 ~l~~H~~-~~~~   92 (317)
                      .|++|++ .|..
T Consensus        84 ~L~~H~~~~H~~   95 (107)
T 1wjp_A           84 SIWRHQVEVHNQ   95 (107)
T ss_dssp             HHHHHHHHTSCC
T ss_pred             HHHHHHHHHcCC
Confidence            9999998 5544

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=5e-15  Score=104.39  Aligned_cols=41  Identities=20%  Similarity=0.336  Sum_probs=37.8

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcccccc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVF  257 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F  257 (317)
                      +++|.|.+|++.|.....|..|+++|+           ++++|.|..|+.+|
T Consensus        45 ~~~~~C~~C~~~f~~~~~L~~H~~~h~-----------~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           45 PAAFVCSKCGKTFTRRNTMARHADNCA-----------GPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHHCC-----------CCCSCCCCCCCCCC
T ss_pred             CcceECCCCCChhCCHHHHHHHHHHcc-----------CCCCcccCCCCCCC
Confidence            368999999999999999999998876           99999999999876

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.48  E-value=1.2e-16  Score=120.05  Aligned_cols=85  Identities=18%  Similarity=0.199  Sum_probs=76.4

Q ss_pred             CCCCCCc--ccCcCCCccccccccccccCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCccccCCCCCccCcCCCCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPS--DSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGY   77 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f   77 (317)
                      ++|.|++  |++.|.+...|..|+++|+++++|        .|.  .|+..|.....|..|+..|.+.++|.|+.|++.|
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   76 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPY--------QCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF   76 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCE--------ECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCc--------cCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchh
Confidence            6899987  999999999999999999999999        898  7999999999999999999999999999999999


Q ss_pred             CCCCCccccccccCCcc
Q 021090           78 GLRNNPKKSFRFADPEF   94 (317)
Q Consensus        78 ~~~~~l~~H~~~~~~~~   94 (317)
                      .....|.+|++.+.+..
T Consensus        77 ~~~~~l~~H~~~h~~~~   93 (119)
T 2jp9_A           77 SRSDHLKTHTRTHTGEK   93 (119)
T ss_dssp             SCHHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHHhcCCC
Confidence            99999999998876643

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.47  E-value=1.1e-15  Score=120.51  Aligned_cols=81  Identities=16%  Similarity=0.172  Sum_probs=51.2

Q ss_pred             CCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCccccCCCCCccCc--CCCCCCC
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSD--STESASTSSSSSGEGVEVKGKSPEVAEE--KSLGYGL   79 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~--c~~~f~~   79 (317)
                      |.|++|++.|.+...|..|+++|+++++|        .|..  |+..|.....|..|+..|.++++|.|+.  |++.|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~  134 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPF--------PCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFAN  134 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSE--------ECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcc--------cCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCC
Confidence            55666666666666666666666666666        6655  6666666666666666666666666664  6666666


Q ss_pred             CCCccccccccCC
Q 021090           80 RNNPKKSFRFADP   92 (317)
Q Consensus        80 ~~~l~~H~~~~~~   92 (317)
                      +..|.+|+++|++
T Consensus       135 ~~~L~~H~~~H~~  147 (155)
T 2rpc_A          135 SSDRKKHMHVHTS  147 (155)
T ss_dssp             HHHHHHSSTTTTS
T ss_pred             HHHHHHHHHHhcC
Confidence            6666666666554

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.47  E-value=3.3e-18  Score=121.70  Aligned_cols=83  Identities=14%  Similarity=0.212  Sum_probs=78.5

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLR   80 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~   80 (317)
                      .|||.|++|++.|.+++.|.+|+++|++++||        .|..|+..|.....|..|+..+.+ .+|.|+.|+..|..+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~--------~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~   71 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF--------ACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKN   71 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCE--------ECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCc--------cCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHH
Confidence            48999999999999999999999999999999        999999999999999999999884 789999999999999


Q ss_pred             CCccccccccCC
Q 021090           81 NNPKKSFRFADP   92 (317)
Q Consensus        81 ~~l~~H~~~~~~   92 (317)
                      ..|++|++..+.
T Consensus        72 ~~L~~H~~~~h~   83 (88)
T 1llm_C           72 YHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHH
Confidence            999999987765

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=5.1e-15  Score=101.08  Aligned_cols=61  Identities=25%  Similarity=0.550  Sum_probs=55.8

Q ss_pred             hhhhccCcceech--hhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhcc
Q 021090          200 EEIKLTRGKYRCE--KCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       200 ~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      ...+.++++|.|.  .|++.|.....|..|+++|.           +++||.|++||+.|.+...|..|+++|+
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHT-----------GQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH-----------CCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC-----------CCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3446688999997  69999999999999998877           8999999999999999999999999995

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.46  E-value=5e-16  Score=117.44  Aligned_cols=84  Identities=11%  Similarity=0.101  Sum_probs=65.2

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc---ccCCCCCccCcCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVE---VKGKSPEVAEEKSLGYG   78 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~---~~~~~~~~C~~c~~~f~   78 (317)
                      ++|.|++|++.|.+...|.+|+++|+++++|        .|..|+..|.+...|..|+..   +.+..+|.|+.|+..|.
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~   77 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPF--------ECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFR   77 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSC--------BCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEES
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCe--------ECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccC
Confidence            6788999999999999999999999888888        777777777777777777663   45666777777777777


Q ss_pred             CCCCccccccccCCc
Q 021090           79 LRNNPKKSFRFADPE   93 (317)
Q Consensus        79 ~~~~l~~H~~~~~~~   93 (317)
                      ....|.+|++.+.+.
T Consensus        78 ~~~~l~~H~~~h~~~   92 (124)
T 2dlq_A           78 RRMELRLHMVSHTGE   92 (124)
T ss_dssp             SHHHHHHHHHHHSSS
T ss_pred             CHHHHHHHHHHcCCC
Confidence            777777777766554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.4e-15  Score=105.50  Aligned_cols=69  Identities=19%  Similarity=0.229  Sum_probs=66.1

Q ss_pred             CCCCCCc--ccCcCCCccccccccc-cccCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCccccCCCCCccCcCCCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMK-AHLAAHPLPPKTNQQQQPSD--STESASTSSSSSGEGVEVKGKSPEVAEEKSLG   76 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r-~H~~ek~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~   76 (317)
                      ++|.|..  |++.|.++..|.+|++ +|+++++|        .|..  |++.|.....|..|+.+|.++++|.|+.|++.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~--------~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSF--------SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCE--------ECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCe--------ECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            6889987  9999999999999999 89999999        9998  99999999999999999999999999999999


Q ss_pred             CC
Q 021090           77 YG   78 (317)
Q Consensus        77 f~   78 (317)
                      |+
T Consensus        78 F~   79 (79)
T 2dlk_A           78 SG   79 (79)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.5e-15  Score=103.09  Aligned_cols=61  Identities=23%  Similarity=0.406  Sum_probs=58.2

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCcc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVA   70 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   70 (317)
                      ++|.|++|++.|.+...|.+|+++|++++||        .|..|+..|.....|.+|+.+|.++++|+|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPY--------KCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSE--------ECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCe--------eCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            7899999999999999999999999999999        999999999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.44  E-value=2.4e-16  Score=110.93  Aligned_cols=78  Identities=15%  Similarity=0.073  Sum_probs=74.3

Q ss_pred             CCCC--CcccCcCCCccccccccccccCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCccccCCCCCccCc---CCC
Q 021090            3 KHKC--KLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSD--STESASTSSSSSGEGVEVKGKSPEVAEE---KSL   75 (317)
Q Consensus         3 ~~~C--~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~---c~~   75 (317)
                      ||.|  ++||+.|.+.+.|.+|+++|++++||        .|..  |++.|.+...|.+|+..|.+   |.|+.   |+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~   69 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY--------ECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSF   69 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCE--------ECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCe--------eCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCC
Confidence            6899  99999999999999999999999999        9988  99999999999999999988   99999   999


Q ss_pred             CCCCCCCccccccccC
Q 021090           76 GYGLRNNPKKSFRFAD   91 (317)
Q Consensus        76 ~f~~~~~l~~H~~~~~   91 (317)
                      .|.....|.+|++.++
T Consensus        70 ~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           70 VGKTWTLYLKHVAECH   85 (85)
T ss_dssp             EESSHHHHHHHHHHCC
T ss_pred             ccCCHHHHHHHHHhcC
Confidence            9999999999998764

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2.4e-14  Score=95.66  Aligned_cols=57  Identities=19%  Similarity=0.342  Sum_probs=53.1

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC-ccccccCCcccccchhhhccCcc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP-FCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~-~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +.++|.|.+|++.|. .+.|..|+++ +           +++||.|+ .||++|..+..|..|+++|-...
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~-----------~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-C-----------PRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-C-----------SSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-c-----------CCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            778999999999999 9999999976 5           89999999 99999999999999999997653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.38  E-value=4.8e-14  Score=99.91  Aligned_cols=55  Identities=22%  Similarity=0.504  Sum_probs=41.7

Q ss_pred             cceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccC
Q 021090          207 GKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       207 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      ++|.|.+|++.|.....|..|+++|+           +++||.|++|++.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHT-----------GEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH-----------CCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcC-----------CCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            56777777777777777777776665           77777777777777777777777777763

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.36  E-value=1.2e-13  Score=105.18  Aligned_cols=66  Identities=21%  Similarity=0.265  Sum_probs=58.0

Q ss_pred             hhhhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          195 MVEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       195 ~~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      .+..|. .|.++++|.|.+||+.|.....|..|+++|             ++||.|++||+.|.+...|..|+++|++..
T Consensus        62 ~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-------------~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           62 YLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-------------EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-------------CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             HHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-------------CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            344454 577899999999999999999999999654             789999999999999999999999998763

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.2e-13  Score=99.47  Aligned_cols=77  Identities=19%  Similarity=0.307  Sum_probs=66.9

Q ss_pred             ccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccchhhhhhh
Q 021090          204 LTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAA  283 (317)
Q Consensus       204 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~a~~~~  283 (317)
                      .++++|.|.+|++.|.....|..|+++|.           +++||.|++|++.|.....|..|+++|.++..-.....+.
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   72 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHT-----------GVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPY   72 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCC-----------CCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcC-----------CCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCC
Confidence            47789999999999999999999998776           8999999999999999999999999999988777777766


Q ss_pred             cccCCccc
Q 021090          284 VVATDPAV  291 (317)
Q Consensus       284 ~~~~~~~~  291 (317)
                      .+.....-
T Consensus        73 ~f~~~~~l   80 (96)
T 2dmd_A           73 ASRNSSQL   80 (96)
T ss_dssp             EESSHHHH
T ss_pred             ccCCHHHH
Confidence            65544443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=1.3e-14  Score=99.39  Aligned_cols=60  Identities=18%  Similarity=0.254  Sum_probs=51.5

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPE   68 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   68 (317)
                      .++|.|++|++.|.+.+.|.+|+++|+++++|        .|..|++.|.....|.+|+.+|.++++|
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~--------~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPY--------RCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSE--------ECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCCE--------ECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            37899999999999999999999999999999        7888887777777777777777776664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.2e-14  Score=105.54  Aligned_cols=66  Identities=12%  Similarity=0.020  Sum_probs=61.0

Q ss_pred             CCCCCCCcccCcCCCccccccccc-cc---cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CccccCCCCCccCcCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMK-AH---LAAHPLPPKTNQQQQPSDSTESASTSSSSSGE-GVEVKGKSPEVAEEKS   74 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r-~H---~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~~~~~~C~~c~   74 (317)
                      .+||.|++||+.|.+++.|.+|++ +|   ++++||        .|..|++.|.....|..| +.+|.++++|.|..+.
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf--------~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSY--------VCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCE--------EETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCc--------CCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            378999999999999999999998 59   678999        999999999999999999 8999999999998743

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.34  E-value=1.5e-13  Score=93.37  Aligned_cols=56  Identities=27%  Similarity=0.570  Sum_probs=51.9

Q ss_pred             ccCcceechh--hhhhccCccchhhhhhhhhcccccccccccCCccccCCc--cccccCCcccccchhhhc
Q 021090          204 LTRGKYRCEK--CKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF--CYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       204 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H  270 (317)
                      ...++|.|..  |++.|.....|.+|+++|+           +++||+|.+  |++.|.+...|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-----------GEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHS-----------SSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcC-----------CCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3678999998  9999999999999998876           899999976  999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.5e-13  Score=95.08  Aligned_cols=64  Identities=27%  Similarity=0.413  Sum_probs=54.9

Q ss_pred             cCcceechh--hhhhccCccchhhhhh-hhhcccccccccccCCccccCCc--cccccCCcccccchhhhccCcccchhh
Q 021090          205 TRGKYRCEK--CKKAFRSYHALGGHKK-VCETNINAGTKVAADEKIFECPF--CYKVFGSGQALGGHKRSHLLANSSSTA  279 (317)
Q Consensus       205 ~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~H~~~h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~~a  279 (317)
                      ++++|.|..  |++.|.+...|..|++ +|.           +++||.|++  |++.|.++..|..|+++|+++..-...
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-----------~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-----------HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGG-----------SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhC-----------CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            678899987  9999999999999997 565           899999998  999999999999999999887654443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4.9e-13  Score=90.87  Aligned_cols=36  Identities=22%  Similarity=0.144  Sum_probs=28.8

Q ss_pred             cceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          207 GKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       207 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      ++|.|.+||+.|.....|..|+++|+           +++||.|++|
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~H~-----------~~~~~~C~~C   73 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGNES-----------GKKTSGPSSG   73 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSCCC-----------CCCCSSCCCC
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHhhc-----------CCCCCCCCCC
Confidence            46788888888888888888886654           7888888877

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.32  E-value=2.7e-13  Score=97.33  Aligned_cols=72  Identities=26%  Similarity=0.376  Sum_probs=62.1

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCc--ccchhhhhh
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA--NSSSTAAAA  282 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~--~~~~~a~~~  282 (317)
                      ++++|.|.+|++.|.....|..|+++|.           +++||.|++|++.|.+...|..|+++|.++  ..-.....+
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~   72 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHS-----------GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCG   72 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSC-----------SSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSC
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcC-----------CCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCcc
Confidence            6789999999999999999999998776           899999999999999999999999999987  555555555


Q ss_pred             hcccC
Q 021090          283 AVVAT  287 (317)
Q Consensus       283 ~~~~~  287 (317)
                      ..+..
T Consensus        73 ~~f~~   77 (95)
T 2yt9_A           73 KGFSR   77 (95)
T ss_dssp             CCBSS
T ss_pred             chhCC
Confidence            44433

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.32  E-value=2.6e-14  Score=100.11  Aligned_cols=31  Identities=32%  Similarity=0.528  Sum_probs=27.5

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++|||.|.+++.|.+|+++|++++||
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~   57 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVF   57 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSE
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCcc
Confidence            5788999999999999999999999988888

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.31  E-value=3.6e-13  Score=86.05  Aligned_cols=48  Identities=29%  Similarity=0.453  Sum_probs=43.2

Q ss_pred             hhccCcceechhhhhhccCccchhhhhh-hhhcccccccccccCCccccCCccccccCCc
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKK-VCETNINAGTKVAADEKIFECPFCYKVFGSG  260 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~  260 (317)
                      .+.++++|.|.+|++.|.....|.+|++ +|+           +++||+|++|++.|.++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-----------~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT-----------SERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSC-----------CCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcC-----------CCCCccCCCCCCCCCCC
Confidence            4568899999999999999999999996 665           99999999999999874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=4.8e-14  Score=102.11  Aligned_cols=77  Identities=5%  Similarity=-0.141  Sum_probs=70.8

Q ss_pred             cCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCccccC-CCCCccCcCCCCCCCCCCccccc
Q 021090           10 TRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESAS-TSSSSSGEGVEVKG-KSPEVAEEKSLGYGLRNNPKKSF   87 (317)
Q Consensus        10 gk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~-~~~~l~~h~~~~~~-~~~~~C~~c~~~f~~~~~l~~H~   87 (317)
                      ...|.....+.+|+++|+++++|        .|..|++.|. ....|..|+..|.+ .++|+|+.|++.|..+..|++|+
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~--------~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~   74 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEA--------VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT   74 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCC--------CCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHhccCCCc--------CCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHH
Confidence            35688889999999999999999        9999999999 99999999999998 88999999999999999999999


Q ss_pred             cccCCcc
Q 021090           88 RFADPEF   94 (317)
Q Consensus        88 ~~~~~~~   94 (317)
                      +.++...
T Consensus        75 ~~h~~~k   81 (98)
T 2gqj_A           75 MAEHSAK   81 (98)
T ss_dssp             HHHSCSC
T ss_pred             HHHcCCC
Confidence            9988744

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.29  E-value=3.4e-13  Score=93.91  Aligned_cols=68  Identities=19%  Similarity=0.436  Sum_probs=60.3

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccchhhhhhhccc
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAAAVVA  286 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~a~~~~~~~  286 (317)
                      ||.|.+|++.|.....|..|+++|.           +++||.|++|++.|.+...|..|+++|.++..-.....+..+.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   68 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-----------DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFS   68 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-----------TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEES
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-----------CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhC
Confidence            5899999999999999999998876           8999999999999999999999999999987666665554443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.28  E-value=7.1e-14  Score=90.36  Aligned_cols=31  Identities=23%  Similarity=0.576  Sum_probs=28.1

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++|++.|.+.+.|.+|+++|++++||
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   33 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPY   33 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCE
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCc
Confidence            7899999999999999999999999998888

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.28  E-value=4.2e-13  Score=95.20  Aligned_cols=73  Identities=22%  Similarity=0.455  Sum_probs=62.7

Q ss_pred             cCcceech--hhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcccchhhhhh
Q 021090          205 TRGKYRCE--KCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSSSTAAAA  282 (317)
Q Consensus       205 ~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~a~~~  282 (317)
                      ++++|.|.  .|++.|.....|..|+++|.           +++||.|++|++.|.+...|..|+++|.++..-.....+
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   69 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHT-----------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG   69 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHH-----------CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhC-----------CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCC
Confidence            35799998  69999999999999998877           899999999999999999999999999998877666666


Q ss_pred             hcccCC
Q 021090          283 AVVATD  288 (317)
Q Consensus       283 ~~~~~~  288 (317)
                      ..+...
T Consensus        70 ~~f~~~   75 (90)
T 1a1h_A           70 RKFARS   75 (90)
T ss_dssp             CEESSH
T ss_pred             chhCCH
Confidence            555443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.27  E-value=5.8e-13  Score=93.31  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=61.7

Q ss_pred             hhhhhHHHhhhhhhhhhhccCcceechh--hhhhccCccchhhhhhhhhcccccccccccCCccccCCc---cccccCCc
Q 021090          186 EAQDHKIVEMVEESEEIKLTRGKYRCEK--CKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF---CYKVFGSG  260 (317)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~---C~k~F~~~  260 (317)
                      +...+.....+..|.+.|.++++|.|.+  |++.|.....|.+|+++|+           +   |.|++   |++.|...
T Consensus         9 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------~---~~C~~~~~C~~~f~~~   74 (85)
T 2j7j_A            9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA-----------G---YPCKKDDSCSFVGKTW   74 (85)
T ss_dssp             CCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH-----------S---EECCSCSSCCCEESSH
T ss_pred             CCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC-----------C---CCCCCCCCCCCccCCH
Confidence            3444555667788888999999999988  9999999999999998886           5   99999   99999999


Q ss_pred             ccccchhhhcc
Q 021090          261 QALGGHKRSHL  271 (317)
Q Consensus       261 ~~L~~H~~~H~  271 (317)
                      ..|..|+++|+
T Consensus        75 ~~l~~H~~~hh   85 (85)
T 2j7j_A           75 TLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            99999999874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.26  E-value=9.3e-14  Score=89.78  Aligned_cols=53  Identities=17%  Similarity=0.194  Sum_probs=40.2

Q ss_pred             CCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVK   63 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~   63 (317)
                      ||.|++||+.|.+.+.|..|+++|++++||        .|..|+..|.....|.+|+..|.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPY--------HCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCE--------ECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCc--------cCCCCCchhcCHHHHHHHHHHhc
Confidence            799999999999999999999999998888        55555555554444444444443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=6.1e-14  Score=94.82  Aligned_cols=58  Identities=22%  Similarity=0.261  Sum_probs=43.5

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKS   66 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   66 (317)
                      .++|.|++|++.|.+...|.+|+++|+++++|        .|..|++.|.....|..|+..|.+++
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~--------~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPF--------KCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCSE--------ECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCE--------eCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            37899999999999999999999999998888        55555555555555555554444443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=1.5e-13  Score=89.81  Aligned_cols=49  Identities=18%  Similarity=0.355  Sum_probs=38.0

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGE   58 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h   58 (317)
                      |||.|++|++.|.+.+.|.+|+++|++++||        .|..|+..|.....|.+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~C~~~f~~~~~l~~H   49 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPY--------PCGLCNRAFTRRDLLIRH   49 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSE--------ECTTTCCEESSHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCc--------cCCCCCCccCCHHHHHHH
Confidence            6899999999999999999999999998888        555554444444444444

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.7e-13  Score=80.97  Aligned_cols=45  Identities=24%  Similarity=0.302  Sum_probs=36.1

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|.+...|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTS-----------CSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888886665           8888888877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.24  E-value=1.4e-12  Score=80.17  Aligned_cols=45  Identities=24%  Similarity=0.293  Sum_probs=37.2

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|.+.+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS-----------CCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888887765           8888888887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-12  Score=80.68  Aligned_cols=44  Identities=23%  Similarity=0.348  Sum_probs=34.6

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTS-----------CCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcC-----------CCCCCCCCCC
Confidence            5566777888888888888888888888886655           7888888877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-12  Score=80.02  Aligned_cols=45  Identities=20%  Similarity=0.282  Sum_probs=36.1

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|...+.|..|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGS-----------SCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35566778888888888888888888888886665           8888888887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-12  Score=80.64  Aligned_cols=45  Identities=24%  Similarity=0.338  Sum_probs=37.0

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTC-----------CCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35567778888999999999999988888887665           8888988887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1e-12  Score=80.81  Aligned_cols=45  Identities=27%  Similarity=0.338  Sum_probs=36.9

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+||+.|...+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHH-----------CCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888887766           8888888887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.2e-12  Score=80.60  Aligned_cols=45  Identities=27%  Similarity=0.264  Sum_probs=37.1

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|.+...|.+|+++|+           +++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHH-----------CSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888887776           8888888887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.2e-12  Score=80.55  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=37.3

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT-----------GVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGS-----------CCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35667778888999999999999999988887665           8889999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=1.3e-12  Score=80.38  Aligned_cols=44  Identities=20%  Similarity=0.164  Sum_probs=34.7

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+||+.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT-----------GVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSS-----------SCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5566777888888888888888888888886655           7888888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.4e-12  Score=79.45  Aligned_cols=44  Identities=23%  Similarity=0.210  Sum_probs=36.1

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+||+.|...+.|.+|+++|+           +++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA-----------EEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHT-----------SSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            3456778888888888888888888888887766           8888888887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.2e-12  Score=80.49  Aligned_cols=45  Identities=22%  Similarity=0.322  Sum_probs=36.8

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT-----------GGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHH-----------SCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            35567778888888888888888888888887766           8888888887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=1.2e-12  Score=80.47  Aligned_cols=45  Identities=24%  Similarity=0.372  Sum_probs=35.4

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGG-----------CCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            35566778888888888888888888888886665           7888888877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-12  Score=80.74  Aligned_cols=45  Identities=20%  Similarity=0.217  Sum_probs=36.6

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHS-----------CCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888887765           8888888887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-12  Score=80.67  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=36.5

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|.+.+.|.+|+++|+           +++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHS-----------SSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHC-----------CCCCCCCCCC
Confidence            35567778888888888888888888888887765           8888888887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-12  Score=80.68  Aligned_cols=45  Identities=24%  Similarity=0.284  Sum_probs=35.7

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+||+.|.+.+.|..|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHA-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHT-----------TSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35566778888888888888888888888887665           7888888877

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.22  E-value=4.4e-13  Score=88.26  Aligned_cols=57  Identities=21%  Similarity=0.394  Sum_probs=49.3

Q ss_pred             hhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchh
Q 021090          197 EESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHK  267 (317)
Q Consensus       197 ~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~  267 (317)
                      ..|.++|.++++|.|.+||+.|.....|.   ++|+           +++||.|++||+.|....++..+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~-----------~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDP-----------MTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEET-----------TTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcC-----------CCCCEECCCCCCccccCccccccc
Confidence            45778899999999999999999988775   4554           999999999999999999887664

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.5e-12  Score=80.04  Aligned_cols=45  Identities=22%  Similarity=0.272  Sum_probs=36.1

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|.+...|.+|+++|+           +++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC-----------SSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888887665           7888888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.22  E-value=1.2e-12  Score=80.60  Aligned_cols=44  Identities=27%  Similarity=0.312  Sum_probs=32.9

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHS-----------SCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            4556677777888888888888888877776655           7777877776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.7e-12  Score=79.83  Aligned_cols=44  Identities=27%  Similarity=0.292  Sum_probs=36.4

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGT-----------TCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5567778888888888888888888888887665           8888888887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.2e-12  Score=80.58  Aligned_cols=45  Identities=18%  Similarity=0.248  Sum_probs=35.9

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+||+.|...+.|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTS-----------CSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            35567778888888888888888888888886665           7888888877

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.22  E-value=1.4e-12  Score=80.18  Aligned_cols=44  Identities=20%  Similarity=0.280  Sum_probs=33.1

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGS-----------SSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcC-----------CCCCcCCCCC
Confidence            5566777778888888888888888888876655           7778888776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-12  Score=80.17  Aligned_cols=45  Identities=24%  Similarity=0.257  Sum_probs=34.5

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT-----------KQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTS-----------CCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35566777888888888888888888888886665           7888888776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.5e-12  Score=80.10  Aligned_cols=44  Identities=23%  Similarity=0.308  Sum_probs=33.9

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+||+.|...+.|.+|+++|+           +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS-----------GKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGS-----------SCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhc-----------CCCCCCCCCC
Confidence            5566777788888888888888888888876655           7788888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.8e-12  Score=79.74  Aligned_cols=44  Identities=25%  Similarity=0.326  Sum_probs=35.1

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM-----------GEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGG-----------SCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            4566778888888888888888888888886665           7888888877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.5e-12  Score=80.02  Aligned_cols=44  Identities=25%  Similarity=0.373  Sum_probs=35.8

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTC-----------CCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcC-----------CCCCCCCCCC
Confidence            5667778888888888888888888888886665           7888888887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-12  Score=80.17  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=38.6

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+|++.|...+.|..|+++|+           +++||+|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHS-----------SCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35667888899999999999999999999997776           8899999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-12  Score=79.84  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=37.9

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|.+.+.|.+|+++|+           +++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT-----------GQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHH-----------SCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            5667788899999999999999999999997776           8899999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.3e-12  Score=80.31  Aligned_cols=45  Identities=20%  Similarity=0.305  Sum_probs=36.5

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|.+...|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT-----------GYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHT-----------CCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888887765           8888888887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.8e-12  Score=79.69  Aligned_cols=44  Identities=23%  Similarity=0.291  Sum_probs=36.1

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT-----------TCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5567778888888888888888888888886665           8888888887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=2.4e-12  Score=79.95  Aligned_cols=43  Identities=30%  Similarity=0.346  Sum_probs=39.0

Q ss_pred             hhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcccc
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYK  255 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k  255 (317)
                      .+.++++|.|.+|++.|.....|.+|+++|+           +++||.|++|+|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHS-----------GEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSC-----------SCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcC-----------CCCCccCCCCCC
Confidence            3457899999999999999999999997766           999999999986

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.2e-12  Score=79.29  Aligned_cols=45  Identities=24%  Similarity=0.336  Sum_probs=37.8

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|+++++|.|.+||+.|...+.|.+|+++|+           +++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGS-----------CCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            35667888889999999999999999999987665           8889999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.7e-12  Score=79.78  Aligned_cols=44  Identities=18%  Similarity=0.169  Sum_probs=34.2

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+|++.|.....|.+|+++|+           +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT-----------GENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTT-----------TSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            5566777888888888888888888888886655           7888888877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.6e-12  Score=80.03  Aligned_cols=44  Identities=25%  Similarity=0.175  Sum_probs=35.0

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+||+.|.+.+.|..|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF-----------REKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHH-----------STTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHc-----------CCCCCCCCCC
Confidence            5566777888888888888888888888887766           7888888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.7e-12  Score=79.84  Aligned_cols=44  Identities=27%  Similarity=0.227  Sum_probs=35.5

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS-----------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTC-----------CSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5567778888888888888888888888886665           7888888877

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=4.7e-13  Score=96.37  Aligned_cols=75  Identities=4%  Similarity=-0.117  Sum_probs=53.1

Q ss_pred             cCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCccccCCCCCccCcCCCCCCCCCCcccc-c
Q 021090           10 TRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESA-STSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKS-F   87 (317)
Q Consensus        10 gk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~-~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l~~H-~   87 (317)
                      ...|...+.|..|+++|+++++|        .|..|++.| .....|..|+.+| ++++|.|..|++.|..+..|++| +
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~--------~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~   83 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSV--------SCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVM   83 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCE--------ECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCc--------CCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhH
Confidence            34566667777777777777777        777777777 6777777777777 66777777777777777788888 6


Q ss_pred             cccCCc
Q 021090           88 RFADPE   93 (317)
Q Consensus        88 ~~~~~~   93 (317)
                      +.|...
T Consensus        84 ~~H~~~   89 (96)
T 2ctd_A           84 ANHNSL   89 (96)
T ss_dssp             HHTCCC
T ss_pred             HhcCCC
Confidence            666543

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.8e-12  Score=79.70  Aligned_cols=45  Identities=24%  Similarity=0.256  Sum_probs=35.9

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+||+.|.....|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGC-----------CCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            35667778888888888888888888888886665           7888888877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.5e-12  Score=80.10  Aligned_cols=44  Identities=25%  Similarity=0.366  Sum_probs=33.6

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+|++.|.....|.+|+++|+           +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTT-----------TCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            5566777788888888888888888888876655           7788888776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2e-12  Score=79.45  Aligned_cols=44  Identities=23%  Similarity=0.192  Sum_probs=34.3

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+||+.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV-----------DDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCC-----------SCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            4566777888888888888888888888886665           7888888877

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.20  E-value=2.1e-12  Score=79.45  Aligned_cols=44  Identities=23%  Similarity=0.282  Sum_probs=36.7

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+           +++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT-----------REKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGC-----------CSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            5567778888999999999999888888887665           8888988887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2e-12  Score=79.53  Aligned_cols=44  Identities=25%  Similarity=0.222  Sum_probs=35.0

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|...+.|..|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM-----------GEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTC-----------CSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5566778888888888888888888888886655           7888888877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.1e-12  Score=79.45  Aligned_cols=45  Identities=29%  Similarity=0.366  Sum_probs=37.7

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT-----------GERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSC-----------SCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhC-----------CCCCCCCCCC
Confidence            35667788889999999999999999999987665           8889999887

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.20  E-value=1.7e-12  Score=93.16  Aligned_cols=59  Identities=25%  Similarity=0.269  Sum_probs=53.0

Q ss_pred             CcceechhhhhhccCccchhhhhhh-hhcccccccccccCCcc--------ccCCccccccCCcccccchhhhccCccc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKV-CETNINAGTKVAADEKI--------FECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~H~~~h~~ekp--------f~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      ...|+|.+|++.|.....|.+|+++ |.           +++|        |.|++|++.|.+...|..|+++|+++..
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~-----------~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   90 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHV-----------GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS   90 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTT-----------CCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhcc-----------CCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            3457899999999999999999987 65           7777        9999999999999999999999998754

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=2.4e-12  Score=79.15  Aligned_cols=44  Identities=27%  Similarity=0.323  Sum_probs=34.8

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+|++.|.+...|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS-----------GEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGT-----------SCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5566777888888888888888888888886665           7888888877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.8e-12  Score=79.72  Aligned_cols=44  Identities=23%  Similarity=0.268  Sum_probs=33.0

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT-----------AEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTT-----------CCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            4556677777888888888888888888876655           7778888776

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.9e-12  Score=79.60  Aligned_cols=44  Identities=23%  Similarity=0.268  Sum_probs=34.1

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTS-----------SCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            4566777788888888888888888888886655           7888888876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.5e-12  Score=80.02  Aligned_cols=44  Identities=23%  Similarity=0.258  Sum_probs=32.9

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+||+.|.....|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT-----------GERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHS-----------CCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcC-----------CCCCCCCCCC
Confidence            5566677777888888888888888877776665           7777887776

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.20  E-value=2.7e-12  Score=81.91  Aligned_cols=49  Identities=20%  Similarity=0.341  Sum_probs=45.0

Q ss_pred             hhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          215 KKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       215 ~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|.|.....|..|+++|+           +++||.|++||+.|.+...|..|+++|+++.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-----------~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-----------SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-----------SSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             ccccCCCcchhhHHHhcC-----------CCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999998776           9999999999999999999999999999875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.2e-12  Score=79.30  Aligned_cols=44  Identities=18%  Similarity=0.184  Sum_probs=36.9

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+||+.|...+.|..|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHM-----------GQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHS-----------CCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5667778888999999999999998988887765           8888998887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.2e-12  Score=79.34  Aligned_cols=44  Identities=20%  Similarity=0.255  Sum_probs=36.5

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS-----------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSC-----------CSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5567778888888888888888888888887665           8888888887

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=1.8e-13  Score=93.06  Aligned_cols=56  Identities=18%  Similarity=0.284  Sum_probs=40.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRN   81 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~   81 (317)
                      ++|.|++|++.|.+...|.+|+++|++++||                                    +|+.|++.|....
T Consensus        13 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~------------------------------------~C~~C~~~f~~~~   56 (72)
T 1x6e_A           13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPY------------------------------------KCLECGKAFSQNS   56 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHGGGCSCCE------------------------------------ECSSSCCEESSHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHhcCCCCCe------------------------------------ECCCCCcccCCHH
Confidence            6778888888888888888888888776666                                    5666666666666


Q ss_pred             CccccccccCCc
Q 021090           82 NPKKSFRFADPE   93 (317)
Q Consensus        82 ~l~~H~~~~~~~   93 (317)
                      .|++|++.+.++
T Consensus        57 ~L~~H~~~H~~~   68 (72)
T 1x6e_A           57 GLINHQRIHTSG   68 (72)
T ss_dssp             HHHHHHHHHHSS
T ss_pred             HHHHHHHhcCCC
Confidence            677776666543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.4e-12  Score=79.14  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=37.9

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      +.++|.++++|.|.+|++.|.....|.+|+++|+           +++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT-----------GEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHH-----------CCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHc-----------CCCCCCCCCC
Confidence            4567788899999999999999999999997776           8899999887

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=2.6e-13  Score=93.48  Aligned_cols=68  Identities=7%  Similarity=-0.020  Sum_probs=60.9

Q ss_pred             cccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc-cccCC-CCCccCcCCCCCCCCCCccccccccCC
Q 021090           17 RALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGV-EVKGK-SPEVAEEKSLGYGLRNNPKKSFRFADP   92 (317)
Q Consensus        17 ~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~-~~~~C~~c~~~f~~~~~l~~H~~~~~~   92 (317)
                      +.|.+|+++|++++||        .|..|++.|.....|..|+. .|.+. ++|+|+.|++.|.....|.+|++.++.
T Consensus         1 Gs~~~H~~~H~~~k~~--------~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            1 GSSGSSGRTHSGEKPY--------ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCCCSCCCSE--------ECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCCccccccCCCCCe--------ECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3688999999999999        99999999999999999986 56664 799999999999999999999998876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.3e-12  Score=79.20  Aligned_cols=44  Identities=30%  Similarity=0.339  Sum_probs=31.0

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|+++++|.|.+|++.|...+.|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTT-----------TSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            4556667777777777777777777777776554           6777777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.8e-12  Score=79.18  Aligned_cols=45  Identities=24%  Similarity=0.226  Sum_probs=34.9

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhh-hhhcccccccccccCCccccCCcc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKK-VCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .|.++|.++++|.|.+|++.|...+.|.+|++ +|+           +++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~-----------~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT-----------GEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT-----------TSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcC-----------CCCCCCCCCC
Confidence            35566777888888888888888888888886 555           7888888877

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=1.3e-12  Score=93.77  Aligned_cols=69  Identities=14%  Similarity=0.107  Sum_probs=55.9

Q ss_pred             CCCCCcccCcCCCcccccccccc-ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKA-HLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAE   71 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~-H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   71 (317)
                      .|+|++|++.|.+...|.+|+++ |+++++..........|..|++.|.....|..|+.+|.++++|+|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            47899999999999999999998 9998882111111118999999999888899999999989999885

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=5.6e-12  Score=77.09  Aligned_cols=42  Identities=14%  Similarity=0.156  Sum_probs=38.2

Q ss_pred             hhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccc
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCY  254 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~  254 (317)
                      .|+++++|.|.+|++.|.....|.+|+++|+           +++||.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~-----------~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHD-----------GSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHS-----------CCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHcc-----------CCCCCCCcCCC
Confidence            4678899999999999999999999998776           89999999997

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.4e-12  Score=77.95  Aligned_cols=44  Identities=25%  Similarity=0.348  Sum_probs=33.4

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHC-----------CCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            5566777788888888888888888888876665           7788888765

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.4e-12  Score=77.20  Aligned_cols=43  Identities=23%  Similarity=0.339  Sum_probs=37.2

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT-----------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTS-----------SSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            456778899999999999999999999997665           8999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.4e-11  Score=83.55  Aligned_cols=64  Identities=14%  Similarity=0.019  Sum_probs=52.6

Q ss_pred             CccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCCccccccccCCc
Q 021090           15 NGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPE   93 (317)
Q Consensus        15 ~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l~~H~~~~~~~   93 (317)
                      +++.|..|+++|++++||        .|..|+..|.....|..       .++|.|+.|+..|.....|.+|++.+.+.
T Consensus         2 ~~~~l~~H~~~h~~~~~~--------~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~   65 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQ--------KCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGK   65 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEE--------ECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCC
T ss_pred             cchhHHHHHHHhCCCCCe--------eCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCC
Confidence            567888888888888888        88888888888777766       67888888888888888888888887654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.7e-12  Score=77.43  Aligned_cols=43  Identities=21%  Similarity=0.191  Sum_probs=37.4

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      .++|.++++|.|.+|++.|.+...|..|+++|+           +++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT-----------REKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH-----------HCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC-----------CCCCCCCCCC
Confidence            456778899999999999999999999997776           8899999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=1.2e-12  Score=87.19  Aligned_cols=55  Identities=13%  Similarity=0.240  Sum_probs=41.9

Q ss_pred             CCCCCCcccCcCCCcccccccccc-c-cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKA-H-LAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGL   79 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~-H-~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~   79 (317)
                      +||.|++||+.|.+++.|.+|+++ | .+++||                                    .|+.|++.|..
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~------------------------------------~C~~C~k~f~~   52 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVY------------------------------------PCPFCFKEFTR   52 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCE------------------------------------ECTTTCCEESC
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHcCCCCcCe------------------------------------ECCCCCCccCC
Confidence            689999999999999999999997 7 466666                                    56666666666


Q ss_pred             CCCccccccccCC
Q 021090           80 RNNPKKSFRFADP   92 (317)
Q Consensus        80 ~~~l~~H~~~~~~   92 (317)
                      +..|.+|++.+++
T Consensus        53 ~~~L~~H~~~~H~   65 (66)
T 2drp_A           53 KDNMTAHVKIIHK   65 (66)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcC
Confidence            6667777665543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=1.2e-11  Score=78.91  Aligned_cols=43  Identities=26%  Similarity=0.434  Sum_probs=39.6

Q ss_pred             CCCCCCCcccCcCCCccccccccc-cccCCCCCCCCCCCCCCCCCCCCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMK-AHLAAHPLPPKTNQQQQPSDSTESAST   51 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r-~H~~ek~~~~~~~~~~~c~~c~~~~~~   51 (317)
                      .++|.|++|++.|.++..|.+|++ +|++++||        .|..|++.|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~--------~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH--------KCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC--------CSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCc--------cCCCCCCCCCC
Confidence            378999999999999999999998 99999999        89999888875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.12  E-value=1.7e-11  Score=71.38  Aligned_cols=36  Identities=31%  Similarity=0.626  Sum_probs=33.2

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |+++|++++||+|++|++.|.+...|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            667888999999999999999999999999999874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1e-12  Score=90.73  Aligned_cols=56  Identities=14%  Similarity=0.190  Sum_probs=44.4

Q ss_pred             CCCCCCCcccCcCCCccccccccccccC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLA---AHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGY   77 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~---ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f   77 (317)
                      .++|.|++|++.|.+++.|.+|+++|++   +++|                                    .|+.|++.|
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~------------------------------------~C~~C~k~f   48 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRF------------------------------------PCEFCGKRF   48 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCE------------------------------------ECTTTCCEE
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCccc------------------------------------CCCCCCchh
Confidence            3789999999999999999999999996   5555                                    666666667


Q ss_pred             CCCCCccccccccCC
Q 021090           78 GLRNNPKKSFRFADP   92 (317)
Q Consensus        78 ~~~~~l~~H~~~~~~   92 (317)
                      ..+..|.+|++..+.
T Consensus        49 ~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A           49 EKPDSVAAHRSKSHP   63 (78)
T ss_dssp             SSHHHHHHHHHHTST
T ss_pred             CCHHHHHHHHHHhCC
Confidence            777777777755444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.10  E-value=9.6e-12  Score=87.87  Aligned_cols=71  Identities=20%  Similarity=0.326  Sum_probs=60.5

Q ss_pred             cCcceechh--hhhhccCccchhhhhhhhhcccccccccccCCccccCC--ccccccCCcccccchhhhccCcccchhhh
Q 021090          205 TRGKYRCEK--CKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP--FCYKVFGSGQALGGHKRSHLLANSSSTAA  280 (317)
Q Consensus       205 ~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~~a~  280 (317)
                      ..++|.|.+  |++.|.....|..|+++|.           +++||.|+  .|++.|.+...|..|+++|.++..-....
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHT-----------GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK   70 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSC-----------SSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcC-----------CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            356899999  9999999999999997765           89999997  59999999999999999999987666655


Q ss_pred             hhhccc
Q 021090          281 AAAVVA  286 (317)
Q Consensus       281 ~~~~~~  286 (317)
                      .+.++.
T Consensus        71 C~~~f~   76 (89)
T 2wbs_A           71 CDRAFS   76 (89)
T ss_dssp             SSCEES
T ss_pred             CCcccC
Confidence            554443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.10  E-value=5.1e-14  Score=107.28  Aligned_cols=80  Identities=9%  Similarity=-0.105  Sum_probs=70.6

Q ss_pred             CCCCCcccCcCC------CccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCC
Q 021090            3 KHKCKLCTRSFS------NGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLG   76 (317)
Q Consensus         3 ~~~C~~Cgk~F~------~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~   76 (317)
                      +|.|++|++.|.      ..+.|..|+ .|++++||        .|..|++.|.....|..|+.+|  .++|.|+.|++.
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~--------~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~  109 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQF--------VCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKE  109 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSE--------ECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCB
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCe--------ECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcc
Confidence            466888877765      667777777 69999999        9999999999999999999998  889999999999


Q ss_pred             CCCCCCccccccccCCc
Q 021090           77 YGLRNNPKKSFRFADPE   93 (317)
Q Consensus        77 f~~~~~l~~H~~~~~~~   93 (317)
                      |..+..|++|++.+++.
T Consensus       110 f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          110 FTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CSSHHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHHHCCc
Confidence            99999999999998873

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=99.10  E-value=1.2e-11  Score=69.69  Aligned_cols=31  Identities=26%  Similarity=0.506  Sum_probs=30.1

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      |||.|++|||.|.+++.|.+|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            6899999999999999999999999999998

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=72.61  Aligned_cols=37  Identities=27%  Similarity=0.383  Sum_probs=28.7

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++||+.|.+...|..|+++|+++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG   38 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCS
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCC
Confidence            5566778888888888888888888888888887664

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-11  Score=76.18  Aligned_cols=32  Identities=25%  Similarity=0.456  Sum_probs=16.5

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      .++|+++++|.|.+|++.|.+.+.|..|+++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIH   35 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHh
Confidence            34444555555555555555555555555443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=1.3e-11  Score=76.57  Aligned_cols=39  Identities=21%  Similarity=0.439  Sum_probs=36.1

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTE   47 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~   47 (317)
                      .++|.|++|++.|.+.+.|.+|+++|++++||        .|..|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~--------~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY--------SSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC--------CSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCc--------cCCCCCC
Confidence            37899999999999999999999999999999        8888864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.4e-11  Score=75.66  Aligned_cols=34  Identities=26%  Similarity=0.461  Sum_probs=18.7

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT   36 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcC
Confidence            3444555555555555555555555555554443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.09  E-value=1.3e-11  Score=75.82  Aligned_cols=34  Identities=21%  Similarity=0.451  Sum_probs=18.7

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhC
Confidence            3444555555555555555555555555554444

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-11  Score=75.82  Aligned_cols=34  Identities=29%  Similarity=0.520  Sum_probs=19.2

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS   36 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcC
Confidence            3444555556666666666666666666655444

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.2e-11  Score=73.99  Aligned_cols=31  Identities=26%  Similarity=0.528  Sum_probs=25.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A           11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             cCeECCCCCCeeCCHHHHHHHhhhcCCCCCC
Confidence            6788888888888888888888888888888

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-11  Score=75.88  Aligned_cols=36  Identities=28%  Similarity=0.397  Sum_probs=17.3

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |+++|++++||+|++|++.|.+...|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGE   38 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCC
Confidence            334444444455555555555555555554444444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-11  Score=75.84  Aligned_cols=36  Identities=25%  Similarity=0.418  Sum_probs=18.4

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGE   38 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC
Confidence            344444555555555555555555555555555544

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=75.23  Aligned_cols=42  Identities=24%  Similarity=0.408  Sum_probs=25.3

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      |.++|.++++|.|.+|++.|.....|..|+++|+           +++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT-----------GEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHT-----------SSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcC-----------CCCCCCCC
Confidence            3445556666666666666666666666665544           56666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.8e-11  Score=75.05  Aligned_cols=43  Identities=28%  Similarity=0.357  Sum_probs=28.3

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      |.+.|.++++|.|.+|++.|.....|.+|+++|+           +++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT-----------GEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHH-----------SCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcC-----------CCCCCCCCC
Confidence            4455666667777777777777777777766555           666777653

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.4e-11  Score=75.55  Aligned_cols=33  Identities=21%  Similarity=0.453  Sum_probs=17.6

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .++|.++++|.|.+|++.|...+.|.+|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT   36 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTS
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcC
Confidence            344455555555555555555555555554443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-11  Score=75.90  Aligned_cols=34  Identities=29%  Similarity=0.467  Sum_probs=18.4

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      |.+.|.++++|.|.+|++.|.....|.+|+++|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT   36 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhC
Confidence            3344555555555555555555555555554443

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-11  Score=75.44  Aligned_cols=37  Identities=30%  Similarity=0.451  Sum_probs=19.1

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK   39 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3444445555555555555555555555555555443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=9.9e-12  Score=84.97  Aligned_cols=67  Identities=16%  Similarity=0.143  Sum_probs=59.0

Q ss_pred             hhhhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          196 VEESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       196 ~~~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +..|...+.+.++|.|..|++.|. ...|..|+ .|.           +++||.|+.|++.|.. ..|..|+++|.++..
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c-----------~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYC-----------GARTELCGNCGRNVLV-KDLKTHPEVCGREGS   70 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHH-----------HHCEEECSSSCCEEET-TGGGTHHHHBTTBSS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHc-----------CCCceEcccCCCcCcH-HHHHHHHHHccCCcC
Confidence            456777888999999999999995 88999998 666           8999999999999884 999999999999854


Q ss_pred             c
Q 021090          276 S  276 (317)
Q Consensus       276 ~  276 (317)
                      +
T Consensus        71 ~   71 (75)
T 2d9k_A           71 G   71 (75)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.9e-11  Score=73.44  Aligned_cols=39  Identities=28%  Similarity=0.344  Sum_probs=31.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            466777788888888888888888888888888887653

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-11  Score=75.38  Aligned_cols=32  Identities=22%  Similarity=0.366  Sum_probs=17.0

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      .++|.++++|.|.+|++.|.....|.+|+++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emg_A            4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIH   35 (46)
T ss_dssp             CCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHh
Confidence            34444555555555555555555555555443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.7e-11  Score=75.31  Aligned_cols=33  Identities=30%  Similarity=0.479  Sum_probs=18.0

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .++|.++++|.|.+|++.|.....|.+|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS   36 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTT
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcC
Confidence            344555555555555555555555555554443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2e-11  Score=74.95  Aligned_cols=34  Identities=26%  Similarity=0.489  Sum_probs=17.8

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR   36 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhC
Confidence            3344455555555555555555555555554433

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.07  E-value=2e-11  Score=73.33  Aligned_cols=34  Identities=29%  Similarity=0.483  Sum_probs=17.1

Q ss_pred             ccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          240 KVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ++|++++||+|++|++.|.+...|..|+++|+++
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGE   36 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCC
Confidence            3444555555555555555555555555555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.07  E-value=4e-11  Score=73.55  Aligned_cols=31  Identities=29%  Similarity=0.594  Sum_probs=23.9

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      +||.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em0_A           11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPS   41 (46)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHGGGGSSSSCS
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHcCCCCCc
Confidence            5677777777777777777777777777777

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.7e-11  Score=75.28  Aligned_cols=32  Identities=28%  Similarity=0.547  Sum_probs=16.3

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      .++|.++++|.|.+|++.|.....|.+|+++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH   35 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTT
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHHHh
Confidence            34444555555555555555555555555443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.2e-11  Score=73.97  Aligned_cols=31  Identities=29%  Similarity=0.495  Sum_probs=27.2

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPS   41 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTTTCCSCSS
T ss_pred             CCcCCCccChhhCChHHHHHHHHHhCCCCCC
Confidence            6788888888888888888888888888888

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4e-11  Score=73.52  Aligned_cols=44  Identities=27%  Similarity=0.366  Sum_probs=40.2

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|.++|+++++|.|.+|++.|.....|.+|+++|+           +++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT-----------GEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGC-----------CCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------CCCCCCCCC
Confidence            46788999999999999999999999999997766           999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.7e-11  Score=75.18  Aligned_cols=32  Identities=22%  Similarity=0.429  Sum_probs=16.4

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      .++|.++++|.|.+|++.|.+...|.+|+++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTH   35 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTS
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh
Confidence            34444555555555555555555555555443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.7e-11  Score=75.21  Aligned_cols=42  Identities=26%  Similarity=0.333  Sum_probs=25.5

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT-----------QETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHS-----------SCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhC-----------CCCCCCCC
Confidence            4445556666666666666666666666665544           56666665

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.07  E-value=3.4e-11  Score=73.88  Aligned_cols=31  Identities=35%  Similarity=0.581  Sum_probs=25.1

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++|||.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ely_A           11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPS   41 (46)
T ss_dssp             CSBCCSSSCCCBSSTTHHHHHHHHHSCCSSC
T ss_pred             CCcccCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            6788888888888888888888888888887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.1e-11  Score=73.48  Aligned_cols=31  Identities=19%  Similarity=0.462  Sum_probs=26.6

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      +||.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2elz_A           11 KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS   41 (46)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC
T ss_pred             CCeeCcccCchhCCHHHHHHHHHhcCCCCCC
Confidence            6788888888888888888888888888888

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.8e-11  Score=75.13  Aligned_cols=36  Identities=31%  Similarity=0.382  Sum_probs=18.0

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGE   38 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            334444555555555555555555555555555544

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.6e-11  Score=75.41  Aligned_cols=35  Identities=29%  Similarity=0.481  Sum_probs=16.7

Q ss_pred             cccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          239 TKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       239 ~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +++|++++||+|++|++.|.+...|..|+++|+++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGE   38 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSS
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC
Confidence            33444444444444444444444444444444444

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.6e-11  Score=73.75  Aligned_cols=39  Identities=31%  Similarity=0.498  Sum_probs=36.0

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC
Confidence            577888899999999999999999999999999998754

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.06  E-value=3.4e-11  Score=72.26  Aligned_cols=42  Identities=21%  Similarity=0.309  Sum_probs=38.3

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      |.++|+++++|.|.+|++.|.+.+.|.+|+++|+           +++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHA-----------GESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGC-----------CCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcC-----------CCCCCCCC
Confidence            4578899999999999999999999999997776           99999995

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4e-11  Score=73.52  Aligned_cols=44  Identities=23%  Similarity=0.318  Sum_probs=40.2

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT-----------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTT-----------TSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhC-----------CCCCCCCCC
Confidence            46788999999999999999999999999997776           999999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.6e-11  Score=75.29  Aligned_cols=32  Identities=28%  Similarity=0.527  Sum_probs=16.1

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      .++|.++++|.|.+|++.|.....|.+|+++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIH   35 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence            33444555555555555555555555555433

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.9e-11  Score=73.57  Aligned_cols=31  Identities=26%  Similarity=0.544  Sum_probs=23.1

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPS   41 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTGGGGSSCCSS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            5677777777777777777777777777777

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-11  Score=75.62  Aligned_cols=37  Identities=27%  Similarity=0.427  Sum_probs=20.2

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK   39 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCC
Confidence            4444555555555555555555555555555555543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.06  E-value=2.6e-11  Score=87.62  Aligned_cols=72  Identities=22%  Similarity=0.352  Sum_probs=62.3

Q ss_pred             cCcceechh--hhhhccCccchhhhhhhhhcccccccccccCCccccCC--ccccccCCcccccchhhhccCcccchhhh
Q 021090          205 TRGKYRCEK--CKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP--FCYKVFGSGQALGGHKRSHLLANSSSTAA  280 (317)
Q Consensus       205 ~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~~a~  280 (317)
                      ..++|.|.+  |++.|.....|..|+++|.           ++++|.|+  .|++.|.....|..|+++|+++..-....
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   80 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHT-----------GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV   80 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHS-----------CCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhC-----------CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC
Confidence            567899997  9999999999999998876           89999996  69999999999999999999987766666


Q ss_pred             hhhcccC
Q 021090          281 AAAVVAT  287 (317)
Q Consensus       281 ~~~~~~~  287 (317)
                      .+..+..
T Consensus        81 C~~~f~~   87 (100)
T 2ebt_A           81 CNRSFSR   87 (100)
T ss_dssp             SCCBCSS
T ss_pred             CcCccCC
Confidence            6554443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.5e-11  Score=73.77  Aligned_cols=31  Identities=26%  Similarity=0.534  Sum_probs=26.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++|+|.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPS   41 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHhCCCCCC
Confidence            6788888888888888888888888888888

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=3.8e-11  Score=72.89  Aligned_cols=38  Identities=29%  Similarity=0.489  Sum_probs=26.6

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS   39 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCC
Confidence            45566667777777777777777777777777776654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5e-11  Score=73.09  Aligned_cols=44  Identities=25%  Similarity=0.345  Sum_probs=40.2

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|.++|.++++|.|.+|++.|.....|.+|+++|+           +++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT-----------GEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGT-----------TCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcC-----------CCCCCCCCC
Confidence            46788999999999999999999999999997776           999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4e-11  Score=71.92  Aligned_cols=35  Identities=23%  Similarity=0.492  Sum_probs=21.1

Q ss_pred             cccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          239 TKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       239 ~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +++|++++||.|++|++.|.+...|..|+++|+++
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVK   36 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCC
Confidence            44555666666666666666666666666666554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.05  E-value=2.3e-11  Score=69.02  Aligned_cols=31  Identities=23%  Similarity=0.369  Sum_probs=30.2

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      |||.|++||+.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999998

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.5e-11  Score=72.50  Aligned_cols=38  Identities=26%  Similarity=0.296  Sum_probs=25.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|+++|++++||.|++||+.|.+...|..|+++|+++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES   39 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSS
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCC
Confidence            35556667777777777777777777777777776654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.4e-11  Score=73.87  Aligned_cols=33  Identities=27%  Similarity=0.530  Sum_probs=19.1

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .++|+++++|.|.+|++.|.....|.+|+++|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS   36 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC
Confidence            344555566666666666666666666664443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.8e-11  Score=73.64  Aligned_cols=39  Identities=23%  Similarity=0.360  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.++..|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP   40 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998764

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.4e-11  Score=73.88  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=22.1

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|+++|++++||+|++|++.|.++..|..|+++|+++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER   39 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCC
Confidence            34455556666666666666666666666666665543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.9e-11  Score=73.59  Aligned_cols=39  Identities=26%  Similarity=0.405  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||+|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP   40 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998764

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.05  E-value=3e-11  Score=74.07  Aligned_cols=31  Identities=26%  Similarity=0.481  Sum_probs=26.5

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++|||.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             CceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            6788888888888888888888888888888

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.8e-11  Score=74.23  Aligned_cols=31  Identities=26%  Similarity=0.577  Sum_probs=27.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      +||.|++|||.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPS   41 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGGTSCSSCS
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            6788888888888888888888888888888

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.3e-11  Score=73.14  Aligned_cols=36  Identities=28%  Similarity=0.442  Sum_probs=21.7

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQ   38 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSS
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCC
Confidence            445555666666666666666666666666666554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4e-11  Score=73.54  Aligned_cols=39  Identities=23%  Similarity=0.338  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP   40 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998764

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.05  E-value=3.3e-11  Score=73.94  Aligned_cols=31  Identities=29%  Similarity=0.550  Sum_probs=25.0

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emk_A           11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPS   41 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHHHHSSCCCS
T ss_pred             CceECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            6788888888888888888888888888777

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.5e-11  Score=73.28  Aligned_cols=31  Identities=29%  Similarity=0.594  Sum_probs=23.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytr_A           11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPS   41 (46)
T ss_dssp             CTTCCTTTCCCCSSHHHHHHHHTTTTTCSCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            5677777777777777777777777777777

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4e-11  Score=73.55  Aligned_cols=31  Identities=32%  Similarity=0.639  Sum_probs=24.4

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoq_A           11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPS   41 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHTTCCCSS
T ss_pred             CCcCCCcCCchhCCHHHHHHHHHHcCCCCCC
Confidence            5777888888888888888887777777777

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.8e-11  Score=74.25  Aligned_cols=32  Identities=22%  Similarity=0.505  Sum_probs=15.9

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      .++|.++++|.|.+|++.|.....|..|+++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIH   35 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHc
Confidence            33444455555555555555555555555433

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.4e-11  Score=73.30  Aligned_cols=31  Identities=32%  Similarity=0.598  Sum_probs=25.0

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQRIHTGENPS   41 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTTTSCCS
T ss_pred             CCeeCCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            5788888888888888888888888888777

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.8e-11  Score=73.14  Aligned_cols=39  Identities=23%  Similarity=0.354  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP   40 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998764

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.9e-11  Score=73.12  Aligned_cols=44  Identities=23%  Similarity=0.347  Sum_probs=40.0

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|.++|.++++|.|.+|++.|.....|.+|+++|+           +++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT-----------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTS-----------CSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcC-----------CCCCCCCCC
Confidence            46788999999999999999999999999997766           999999974

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4e-11  Score=73.48  Aligned_cols=31  Identities=32%  Similarity=0.528  Sum_probs=25.7

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eq4_A           11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPS   41 (46)
T ss_dssp             CCCCBTTTTBCCSCHHHHHHHHHHCCSSSCC
T ss_pred             CCeECCCCCCccCchHHHHHHHHhcCCCCCC
Confidence            6788888888888888888888888888888

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=2.1e-11  Score=74.41  Aligned_cols=38  Identities=16%  Similarity=0.280  Sum_probs=35.3

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDST   46 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~   46 (317)
                      .+||.|++|++.|.+++.|.+|+++|+++++|        .|+.|+
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~--------~C~~cg   45 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK--------SGPSSG   45 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCCC--------CCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHHHHHHHHccCCCCC--------CCcCCC
Confidence            37999999999999999999999999999999        888775

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.2e-11  Score=72.62  Aligned_cols=38  Identities=29%  Similarity=0.468  Sum_probs=23.4

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES   39 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSS
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCC
Confidence            34455556666666666666666666666666666543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5.4e-11  Score=71.40  Aligned_cols=37  Identities=27%  Similarity=0.402  Sum_probs=27.9

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG   38 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCS
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4566677788888888888888888888888777654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.2e-11  Score=73.96  Aligned_cols=39  Identities=26%  Similarity=0.426  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||++|.+.+.|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS   40 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC
Confidence            577888899999999999999999999999999998754

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.1e-11  Score=72.41  Aligned_cols=42  Identities=19%  Similarity=0.276  Sum_probs=37.5

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHT-----------VKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTS-----------CCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhC-----------CCCCCCCC
Confidence            3467889999999999999999999999998776           99999984

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=3.2e-11  Score=73.99  Aligned_cols=36  Identities=31%  Similarity=0.511  Sum_probs=30.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      ++|.|++|||.|.+++.|.+|+++|++++||        .|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~--------~C~~C   46 (46)
T 2em7_A           11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPS--------GPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHGGGGTTCCCS--------STTCC
T ss_pred             cCccCCCccchhCCHHHHHHHHHHhCCCCCC--------CCCCC
Confidence            6888999999999999999999999988888        66665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.6e-11  Score=73.63  Aligned_cols=43  Identities=21%  Similarity=0.281  Sum_probs=38.8

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|+++++|.|.+|++.|.....|.+|+++|+           +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS-----------GQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSS-----------SSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcC-----------CCCCCCCC
Confidence            46678889999999999999999999999997766           99999995

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.04  E-value=4.5e-11  Score=73.27  Aligned_cols=39  Identities=26%  Similarity=0.455  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP   40 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC
Confidence            577888899999999999999999999999999998764

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4e-11  Score=73.55  Aligned_cols=39  Identities=26%  Similarity=0.411  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||+|++||++|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP   40 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998754

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3e-11  Score=72.46  Aligned_cols=41  Identities=27%  Similarity=0.316  Sum_probs=37.4

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFEC  250 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C  250 (317)
                      |.++|.++++|.|.+||+.|...+.|.+|+++|+           +++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT-----------GSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTS-----------CCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhC-----------CCCCCCC
Confidence            5667889999999999999999999999997766           9999998

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.9e-11  Score=72.74  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=40.2

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|.++|.++++|.|.+|++.|.....|.+|+++|+           +++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT-----------GENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGS-----------SSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhC-----------CCCCCCCCC
Confidence            46788999999999999999999999999997776           999999975

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5e-11  Score=73.05  Aligned_cols=39  Identities=26%  Similarity=0.328  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.++..|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH   40 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998754

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.04  E-value=4.1e-11  Score=73.52  Aligned_cols=39  Identities=31%  Similarity=0.466  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998764

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=73.81  Aligned_cols=36  Identities=25%  Similarity=0.535  Sum_probs=31.1

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      +||.|++|+|.|.+++.|.+|+++|++++||        .|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~--------~C~~C   46 (46)
T 2ytm_A           11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPS--------GPSSG   46 (46)
T ss_dssp             CSSSBTTTTBCCSSHHHHHHHHHHHHSCCCC--------CCCCC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHcCCCCCC--------CCCCC
Confidence            6889999999999999999999999998888        67665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4.7e-11  Score=73.16  Aligned_cols=39  Identities=28%  Similarity=0.323  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC   40 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998754

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.7e-11  Score=72.89  Aligned_cols=43  Identities=23%  Similarity=0.327  Sum_probs=38.8

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|.++++|.|.+|++.|.....|..|+++|+           +++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT-----------GESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTT-----------TSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhC-----------CCCCCCCC
Confidence            35677889999999999999999999999998776           99999995

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.8e-11  Score=72.77  Aligned_cols=39  Identities=26%  Similarity=0.353  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p   40 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP   40 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCS
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCC
Confidence            577888899999999999999999999999999998764

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=5.8e-11  Score=72.02  Aligned_cols=37  Identities=22%  Similarity=0.409  Sum_probs=22.5

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKS   39 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCC
Confidence            4455556666666666666666666666666665543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.8e-11  Score=73.39  Aligned_cols=43  Identities=28%  Similarity=0.269  Sum_probs=38.6

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|.++++|.|.+||+.|.....|..|+++|+           +++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT-----------GESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTC-----------CSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcC-----------CCCCCCCC
Confidence            35677889999999999999999999999997766           99999995

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=4.6e-11  Score=73.28  Aligned_cols=40  Identities=28%  Similarity=0.429  Sum_probs=36.3

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCcccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSS  276 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~  276 (317)
                      .|+++|++++||+|++|++.|.+...|..|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPS   41 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            4778888999999999999999999999999999987643

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.9e-11  Score=73.58  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998754

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.4e-11  Score=73.36  Aligned_cols=39  Identities=28%  Similarity=0.478  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.++..|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP   40 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC
Confidence            577888899999999999999999999999999998754

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.7e-11  Score=72.81  Aligned_cols=39  Identities=26%  Similarity=0.399  Sum_probs=35.7

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP   40 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCC
Confidence            467888899999999999999999999999999998764

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.6e-11  Score=72.88  Aligned_cols=37  Identities=30%  Similarity=0.396  Sum_probs=22.4

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||+|++|++.|.+...|..|+++|+++.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER   39 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCC
Confidence            4455556666666666666666666666666665554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.3e-11  Score=72.65  Aligned_cols=44  Identities=25%  Similarity=0.358  Sum_probs=40.2

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT-----------GEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTS-----------SSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------CCCCCCCCC
Confidence            47788999999999999999999999999997766           999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.6e-11  Score=73.24  Aligned_cols=40  Identities=25%  Similarity=0.396  Sum_probs=36.3

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCcccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSS  276 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~  276 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPS   41 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCS
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCC
Confidence            5778888999999999999999999999999999987643

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.5e-11  Score=75.11  Aligned_cols=44  Identities=16%  Similarity=0.166  Sum_probs=37.4

Q ss_pred             hhhhhccCcceech--hhhhhccCccchhhhhhhhhcccccccccccCCccccCCcc
Q 021090          199 SEEIKLTRGKYRCE--KCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFC  253 (317)
Q Consensus       199 ~~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C  253 (317)
                      +.++|+++++|.|.  .|++.|.....|.+|+++|+           +++||+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS-----------GVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC-----------CCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC-----------CCCCCCCCCC
Confidence            45677888999998  89999999999999987665           8999999887

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3e-11  Score=74.14  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=39.3

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT-----------GERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHT-----------CCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcC-----------CCCCCCCC
Confidence            46678889999999999999999999999998876           99999997

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.4e-11  Score=72.89  Aligned_cols=39  Identities=31%  Similarity=0.477  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP   40 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSS
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998764

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.9e-11  Score=72.82  Aligned_cols=43  Identities=26%  Similarity=0.347  Sum_probs=38.7

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|.++++|.|.+|++.|.....|..|+++|+           +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHA-----------AKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGC-----------CCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcC-----------CCCCcCCC
Confidence            36677889999999999999999999999997766           99999995

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.4e-11  Score=73.86  Aligned_cols=31  Identities=26%  Similarity=0.547  Sum_probs=26.4

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPS   41 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTTTCCCCCC
T ss_pred             CCeECCCCCchhCChHHHHHHHhhcCCCCCC
Confidence            6788888888888888888888888888888

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.6e-11  Score=72.87  Aligned_cols=39  Identities=26%  Similarity=0.421  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP   40 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            567888899999999999999999999999999998764

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.8e-11  Score=72.48  Aligned_cols=39  Identities=26%  Similarity=0.323  Sum_probs=35.7

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP   40 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCC
Confidence            477888899999999999999999999999999998754

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.1e-11  Score=71.91  Aligned_cols=37  Identities=22%  Similarity=0.282  Sum_probs=23.7

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++|+++|.+...|..|+++|+++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG   38 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCC
Confidence            4455556666666666666666666666666666553

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.6e-11  Score=72.16  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=37.6

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFEC  250 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C  250 (317)
                      |.++|.++++|.|.+|++.|.+...|..|+++|+           +++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT-----------GSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHH-----------SCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcC-----------CCCCCCC
Confidence            4567889999999999999999999999998877           9999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.03  E-value=6.6e-11  Score=72.51  Aligned_cols=39  Identities=26%  Similarity=0.359  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998754

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5e-11  Score=73.05  Aligned_cols=31  Identities=29%  Similarity=0.402  Sum_probs=24.9

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHS   41 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHHHSCCSSC
T ss_pred             CCccCCccChhhCCHHHHHHHHHhcCCCCCC
Confidence            5788888888888888888888888888777

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.7e-11  Score=73.67  Aligned_cols=31  Identities=26%  Similarity=0.592  Sum_probs=25.9

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A           11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CCeECCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            6788888888888888888888888888888

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.8e-11  Score=73.65  Aligned_cols=39  Identities=26%  Similarity=0.388  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL   40 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998764

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.03  E-value=4.1e-11  Score=73.50  Aligned_cols=36  Identities=33%  Similarity=0.524  Sum_probs=31.5

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      ++|.|++|++.|.+++.|.+|+++|++++||        .|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~--------~C~~C   46 (46)
T 2el6_A           11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPS--------GPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSSCC--------SCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCC--------CCCCC
Confidence            6899999999999999999999999999998        77665

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.2e-11  Score=73.97  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=39.4

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|.++|.++++|.|.+|++.|.....|.+|+++|+           +++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT-----------GERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCS-----------SCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC-----------CCCCCCCCC
Confidence            35677889999999999999999999999998776           999999973

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.4e-11  Score=73.82  Aligned_cols=31  Identities=26%  Similarity=0.500  Sum_probs=26.6

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      +||.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPS   41 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTTCCCCCS
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            6788888888888888888888888888888

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.2e-11  Score=73.42  Aligned_cols=39  Identities=21%  Similarity=0.368  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.++..|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP   40 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            577888899999999999999999999999999998754

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6e-11  Score=72.68  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998754

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.7e-11  Score=73.72  Aligned_cols=37  Identities=30%  Similarity=0.495  Sum_probs=33.6

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      .++|.|++|+|.|.+++.|.+|+++|++++||        .|..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~--------~C~~C   46 (46)
T 2ytt_A           10 EKPYQCSECGKSFSGSYRLTQHWITHTREKPS--------GPSSG   46 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCC--------SCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC--------CCCCC
Confidence            37899999999999999999999999999999        77765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=3.6e-11  Score=73.75  Aligned_cols=31  Identities=29%  Similarity=0.630  Sum_probs=25.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSCSCCS
T ss_pred             CCeECCcCCCccCCHHHHHHHHHHhCCCCCC
Confidence            6788888888888888888888888888888

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.9e-11  Score=72.84  Aligned_cols=33  Identities=27%  Similarity=0.516  Sum_probs=16.7

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .++|+++++|.|.+|++.|.....|..|+++|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT   36 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhC
Confidence            344445555555555555555555555554443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.5e-11  Score=74.46  Aligned_cols=33  Identities=21%  Similarity=0.496  Sum_probs=16.2

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .++|.++++|.|.+|++.|.....|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS   36 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHH
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhC
Confidence            334444455555555555555555555554443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4e-11  Score=73.53  Aligned_cols=37  Identities=30%  Similarity=0.352  Sum_probs=22.0

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~   39 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD   39 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCC
Confidence            4455556666666666666666666666666665543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.5e-11  Score=72.58  Aligned_cols=39  Identities=28%  Similarity=0.484  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998764

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.6e-11  Score=72.84  Aligned_cols=39  Identities=28%  Similarity=0.417  Sum_probs=35.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.++..|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP   40 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC
Confidence            577888899999999999999999999999999998764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.6e-11  Score=72.84  Aligned_cols=39  Identities=26%  Similarity=0.498  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            567888899999999999999999999999999998754

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=3.3e-11  Score=73.13  Aligned_cols=36  Identities=28%  Similarity=0.513  Sum_probs=32.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      +||.|++|||.|.+++.|.+|+++|++++||        .|..|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~--------~C~~C   44 (44)
T 2emx_A            9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPS--------GPSSG   44 (44)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHHTSSCSC--------SCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhCCCCCC--------CCCCC
Confidence            7899999999999999999999999999999        77665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=5.2e-12  Score=84.15  Aligned_cols=49  Identities=14%  Similarity=0.251  Sum_probs=36.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPS-DSTESASTSSSSSGEGV   60 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~-~c~~~~~~~~~l~~h~~   60 (317)
                      +||+|++||+.|. .+.|..|+++ ++++||        .|. .|++.|.....|..|+.
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~--------~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPV--------ACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEE--------ECTTCCSCCEEETTTHHHHHH
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCc--------cCCcccCcccccHHHHHHHHH
Confidence            7899999999999 9999999999 988888        444 44444444444444433

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.9e-11  Score=72.21  Aligned_cols=40  Identities=25%  Similarity=0.382  Sum_probs=36.0

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCcccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSS  276 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~  276 (317)
                      .|+++|++++||+|++|++.|.+...|..|+++|+++..-
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCC
Confidence            3677888999999999999999999999999999987643

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.9e-11  Score=72.73  Aligned_cols=39  Identities=23%  Similarity=0.296  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.++..|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998754

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6e-11  Score=72.71  Aligned_cols=39  Identities=26%  Similarity=0.409  Sum_probs=36.0

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.++..|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998754

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.6e-11  Score=72.23  Aligned_cols=39  Identities=28%  Similarity=0.502  Sum_probs=35.6

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP   40 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC
Confidence            567788899999999999999999999999999998754

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=4.6e-11  Score=72.47  Aligned_cols=43  Identities=16%  Similarity=0.298  Sum_probs=38.7

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|.++++|.|.+|++.|.....|..|+++|+           +++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA-----------RKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCC-----------CCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcC-----------CCCCCCCC
Confidence            35677889999999999999999999999998776           99999995

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.6e-11  Score=72.11  Aligned_cols=39  Identities=23%  Similarity=0.359  Sum_probs=35.6

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG   40 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC
Confidence            567888899999999999999999999999999998753

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.7e-11  Score=72.84  Aligned_cols=42  Identities=21%  Similarity=0.329  Sum_probs=30.8

Q ss_pred             hhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          200 EEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       200 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .++|.++++|.|.+|++.|.....|..|+++|+           +++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT-----------GEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTS-----------SCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhC-----------CCCCCCCCC
Confidence            345667777888888888888888888876554           777887763

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=3.9e-11  Score=72.04  Aligned_cols=41  Identities=22%  Similarity=0.325  Sum_probs=37.2

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFEC  250 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C  250 (317)
                      |.++|.++++|.|.+|++.|...+.|.+|+++|+           +++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT-----------GSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTS-----------CCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcC-----------CCCCCCC
Confidence            5567889999999999999999999999997766           9999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.01  E-value=6.8e-11  Score=70.88  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=24.8

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+++|++++||.|++||+.|.++..|..|+++|+++.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   38 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG   38 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCC
Confidence            4455666777777777777777777777777776653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1e-10  Score=71.67  Aligned_cols=39  Identities=28%  Similarity=0.497  Sum_probs=35.5

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.++..|..|+++|+++..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP   40 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC
Confidence            366788899999999999999999999999999998754

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.01  E-value=4.6e-11  Score=71.65  Aligned_cols=41  Identities=22%  Similarity=0.370  Sum_probs=37.4

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccC
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFEC  250 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C  250 (317)
                      |.++|.++++|.|.+||+.|...+.|..|+++|+           +++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~-----------~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS-----------QSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTT-----------CCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcC-----------CCCCCCC
Confidence            4567889999999999999999999999998776           9999998

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=5.5e-11  Score=71.81  Aligned_cols=40  Identities=18%  Similarity=0.219  Sum_probs=29.4

Q ss_pred             hhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .|+++++|.|.+|++.|.....|.+|+++|+           +++||+|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTH-----------SDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHT-----------CTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhC-----------CCCCccCCC
Confidence            4566777777778777777777777776665           777777764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=3.7e-12  Score=86.62  Aligned_cols=31  Identities=29%  Similarity=0.636  Sum_probs=22.8

Q ss_pred             CCCCCC--cccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCK--LCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|+  .|++.|.+.+.|.+|+++|+++++|
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~   50 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPF   50 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCe
Confidence            567776  4777777777777777777776666

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.2e-11  Score=73.42  Aligned_cols=33  Identities=27%  Similarity=0.493  Sum_probs=17.7

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhh
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      |.++|.++++|.|.+|++.|.....|.+|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH   35 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHh
Confidence            334455555555555555555555555555443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=4.4e-11  Score=73.32  Aligned_cols=36  Identities=25%  Similarity=0.525  Sum_probs=31.5

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      +||.|++|||.|.+++.|.+|+++|++++||        .|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~--------~C~~C   46 (46)
T 2enc_A           11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPS--------GPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCCSSCC--------SSCCC
T ss_pred             CCcCCCCCCCcCCChHHHHHHHHHhCCCCCC--------CCCCC
Confidence            6899999999999999999999999999998        77665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.9e-11  Score=72.43  Aligned_cols=39  Identities=28%  Similarity=0.442  Sum_probs=35.5

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++||+.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP   40 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            566788899999999999999999999999999998754

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.2e-11  Score=71.89  Aligned_cols=38  Identities=29%  Similarity=0.493  Sum_probs=35.0

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccC-cc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL-AN  274 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~-~~  274 (317)
                      .|+++|++++||.|++|+++|.+...|..|+++|++ +.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVK   40 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCT
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCC
Confidence            467888899999999999999999999999999998 54

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=5.6e-11  Score=72.14  Aligned_cols=32  Identities=22%  Similarity=0.403  Sum_probs=17.1

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      ++|.++++|.|.+|++.|.....|..|+++|+
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHA   36 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHC
Confidence            34445555555555555555555555554443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.5e-11  Score=73.31  Aligned_cols=43  Identities=16%  Similarity=0.177  Sum_probs=39.1

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|+++++|.|.+|++.|.....|.+|+++|+           +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE-----------RTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHH-----------HSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhC-----------CCCCCCCC
Confidence            35677889999999999999999999999998877           89999996

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.6e-11  Score=72.89  Aligned_cols=39  Identities=33%  Similarity=0.525  Sum_probs=35.7

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||+|++|++.|.+...|..|+++|+++..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS   40 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            577888899999999999999999999999999998754

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=4.8e-11  Score=73.20  Aligned_cols=40  Identities=20%  Similarity=0.239  Sum_probs=26.9

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      +.|.++++|.|.+|++.|.+...|..|+++|+           +++||+|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHT-----------GEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS-----------SCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhC-----------CCCCCCCC
Confidence            44556667777777777777777777766554           66777765

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.6e-11  Score=72.85  Aligned_cols=36  Identities=33%  Similarity=0.666  Sum_probs=33.2

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      ++|.|++|+|.|.+++.|.+|+++|++++||        .|..|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~--------~C~~C   46 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPS--------GPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSSSCCC--------SCCCC
T ss_pred             CCeeCcccCcccCChHHHHHHHHHhCCCCCC--------CCCCC
Confidence            7899999999999999999999999999999        77765

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.9e-11  Score=73.60  Aligned_cols=36  Identities=22%  Similarity=0.389  Sum_probs=31.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||        .|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~--------~C~~C   46 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLS--------GPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHHCCCCC--------CSCCC
T ss_pred             CCeECcccCchhCCHHHHHHHHHHHcCCCCC--------CCCCC
Confidence            6899999999999999999999999999999        77665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7e-11  Score=72.39  Aligned_cols=39  Identities=26%  Similarity=0.388  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   40 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP   40 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC
Confidence            577888899999999999999999999999999998764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.8e-11  Score=72.18  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=35.7

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP   40 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCC
Confidence            567888899999999999999999999999999998754

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.5e-11  Score=73.29  Aligned_cols=31  Identities=26%  Similarity=0.519  Sum_probs=27.6

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|+++|++++||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ysp_A           11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPS   41 (46)
T ss_dssp             CSEEETTTTEEESCHHHHHHHHTTSCSCCSS
T ss_pred             CCeECCCCCCccCCHHHHHHHHHhhCCCCCC
Confidence            6788999999999999999999999888888

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.2e-11  Score=72.35  Aligned_cols=39  Identities=26%  Similarity=0.455  Sum_probs=35.8

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP   40 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC
Confidence            577888899999999999999999999999999998754

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=71.75  Aligned_cols=31  Identities=23%  Similarity=0.462  Sum_probs=26.4

Q ss_pred             CCCCCCcccCcCCCccccccccc-cccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMK-AHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r-~H~~ek~~   32 (317)
                      ++|.|++||+.|.+++.|.+|++ +|++++||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~   42 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPS   42 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSS
T ss_pred             CCEECCccCchhCChHHHHHHhHhhcCCCCCC
Confidence            67888888888888888888888 88888888

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=9.4e-11  Score=71.82  Aligned_cols=39  Identities=21%  Similarity=0.271  Sum_probs=35.7

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++||+.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN   40 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC
Confidence            467888899999999999999999999999999998764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.9e-11  Score=71.73  Aligned_cols=39  Identities=28%  Similarity=0.416  Sum_probs=35.7

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP   40 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC
Confidence            467888899999999999999999999999999998754

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=7.2e-11  Score=68.66  Aligned_cols=35  Identities=17%  Similarity=0.475  Sum_probs=31.5

Q ss_pred             ccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          240 KVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      ++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            56779999999999999999999999999998864

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.97  E-value=9e-12  Score=84.45  Aligned_cols=32  Identities=22%  Similarity=0.638  Sum_probs=30.1

Q ss_pred             CCCCCCCc--ccCcCCCccccccccccccCCCCC
Q 021090            1 MEKHKCKL--CTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      +++|.|.+  |++.|.+...|.+|+++|++++||
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   48 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPF   48 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCc
Confidence            47899999  999999999999999999999888

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=68.09  Aligned_cols=33  Identities=18%  Similarity=0.321  Sum_probs=29.7

Q ss_pred             cccCCccccCCc--cccccCCcccccchhhhccCc
Q 021090          241 VAADEKIFECPF--CYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       241 ~h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      .++++|||+|++  |+|+|.+++.|.+|+++|++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            356899999986  999999999999999999875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=69.40  Aligned_cols=29  Identities=28%  Similarity=0.606  Sum_probs=14.4

Q ss_pred             hccCcceechhhhhhccCccchhhhhhhh
Q 021090          203 KLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       203 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      |.++++|.|.+|++.|.....|..|+++|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   33 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIH   33 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHh
Confidence            33445555555555555555555554433

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=70.25  Aligned_cols=31  Identities=19%  Similarity=0.260  Sum_probs=30.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++|++.|.+++.|.+|+++|++++||
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKSG   39 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCS
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCCc
Confidence            7899999999999999999999999999999

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.5e-10  Score=70.94  Aligned_cols=32  Identities=22%  Similarity=0.454  Sum_probs=30.3

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      .++|.|++|++.|.+++.|.+|+++|++++||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS   41 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCS
T ss_pred             CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCC
Confidence            37899999999999999999999999999999

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.7e-10  Score=69.99  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=35.2

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG   40 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC
Confidence            366788899999999999999999999999999998753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.94  E-value=1.4e-10  Score=71.90  Aligned_cols=37  Identities=24%  Similarity=0.412  Sum_probs=30.1

Q ss_pred             cccCCccccCCccccccCCcccccchhh-hccCcccch
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKR-SHLLANSSS  277 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~  277 (317)
                      +|+++|||.|.+||++|.+...|..|++ +|+++..+.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~~   38 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGE   38 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCCC
Confidence            4779999999999999999999999999 999987664

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=6.8e-11  Score=83.32  Aligned_cols=61  Identities=16%  Similarity=0.211  Sum_probs=52.9

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +.++|.++++|.|.+|++.|.....|..|+++|+           +++||+|..|    .....|..|+++|.+.-
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht-----------~ekp~~C~~~----~~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN-----------EEFQKRAKRQ----ERRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHH-----------HHHHHHCCCC----SCCCCCCCCCCCCCCSS
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC-----------CCCCcccchh----hhHHHHHhhhccccccc
Confidence            3456789999999999999999999999998877           8999999764    57888889999998864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.94  E-value=2e-10  Score=65.76  Aligned_cols=34  Identities=18%  Similarity=0.358  Sum_probs=30.3

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|++++||.|.+|++.|.+...|..|+++|+++.
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            3679999999999999999999999999998764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.93  E-value=1.8e-10  Score=65.96  Aligned_cols=34  Identities=26%  Similarity=0.341  Sum_probs=30.4

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999998764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.3e-10  Score=70.44  Aligned_cols=43  Identities=21%  Similarity=0.184  Sum_probs=38.4

Q ss_pred             hhhhhhccCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCC
Q 021090          198 ESEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECP  251 (317)
Q Consensus       198 ~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~  251 (317)
                      .|.++|+++++|.|.+|++.|...+.|..|+++|+           +++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA-----------GVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGS-----------SCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhc-----------CCCCCCCC
Confidence            46678889999999999999999999999997766           99999873

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.6e-10  Score=68.92  Aligned_cols=32  Identities=25%  Similarity=0.454  Sum_probs=30.6

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      .++|.|++|++.|.+++.|.+|+++|++++||
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            37899999999999999999999999999999

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.7e-10  Score=67.12  Aligned_cols=34  Identities=15%  Similarity=0.232  Sum_probs=31.0

Q ss_pred             ccccCCccccCCccccccCCcccccch-hhhccCc
Q 021090          240 KVAADEKIFECPFCYKVFGSGQALGGH-KRSHLLA  273 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~~~L~~H-~~~H~~~  273 (317)
                      ++|++++||+|+.|+++|.++..|..| +++|++.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            567799999999999999999999999 9999864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.2e-10  Score=70.91  Aligned_cols=32  Identities=22%  Similarity=0.398  Sum_probs=30.5

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      .++|.|++|+|.|.+++.|.+|+++|++++||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (45)
T 2epu_A           10 QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSG   41 (45)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHTTTSSCCCC
T ss_pred             CcCccCCCCCCccCChHHHHHHHHHhCCCCCC
Confidence            37899999999999999999999999999999

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.2e-10  Score=66.55  Aligned_cols=34  Identities=21%  Similarity=0.411  Sum_probs=30.7

Q ss_pred             ccccCCccccCCccccccCCc-ccccchhhhccCc
Q 021090          240 KVAADEKIFECPFCYKVFGSG-QALGGHKRSHLLA  273 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~-~~L~~H~~~H~~~  273 (317)
                      ++|++++||+|++|++.|.+. ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            467799999999999999999 9999999999875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.88  E-value=2.1e-10  Score=67.50  Aligned_cols=32  Identities=34%  Similarity=0.710  Sum_probs=30.7

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      .++|.|++||+.|.+++.|.+|+++|++++||
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            37899999999999999999999999999999

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=3.9e-10  Score=65.01  Aligned_cols=33  Identities=15%  Similarity=0.301  Sum_probs=30.0

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      .|++++||+|++|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            467899999999999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=3.6e-10  Score=73.96  Aligned_cols=32  Identities=22%  Similarity=0.350  Sum_probs=29.7

Q ss_pred             CCCCCCCc--ccCcCCCcccccccc-ccccCCCCC
Q 021090            1 MEKHKCKL--CTRSFSNGRALGGHM-KAHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~--Cgk~F~~~~~L~~H~-r~H~~ek~~   32 (317)
                      .|||+|++  |||.|.+.++|.+|+ |+|+++|||
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            38999975  999999999999998 699999999

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=4.7e-10  Score=64.68  Aligned_cols=33  Identities=24%  Similarity=0.388  Sum_probs=30.1

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      .|++++||+|++|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            577999999999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=4e-10  Score=64.92  Aligned_cols=33  Identities=24%  Similarity=0.362  Sum_probs=30.1

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +|++++||+|++|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            577999999999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=5.4e-10  Score=64.35  Aligned_cols=34  Identities=29%  Similarity=0.391  Sum_probs=30.6

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5779999999999999999999999999998763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=2.8e-10  Score=62.15  Aligned_cols=29  Identities=21%  Similarity=0.622  Sum_probs=27.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            68999999999999999999999999874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=3.3e-10  Score=62.29  Aligned_cols=30  Identities=30%  Similarity=0.582  Sum_probs=28.0

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      ++||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            589999999999999999999999999864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.81  E-value=4.7e-10  Score=61.13  Aligned_cols=29  Identities=24%  Similarity=0.394  Sum_probs=27.4

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=6.4e-10  Score=68.62  Aligned_cols=37  Identities=27%  Similarity=0.499  Sum_probs=32.5

Q ss_pred             CCCCCCC--cccCcCCCccccccccccccCCCCCCCCCCCCCCCCCC
Q 021090            1 MEKHKCK--LCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDS   45 (317)
Q Consensus         1 ~k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c   45 (317)
                      .++|.|.  +|++.|.+++.|.+|+++|++++||        .|..|
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~--------~C~~C   48 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS--------GPSSG   48 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC--------SSCCC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC--------CCCCC
Confidence            3789998  8999999999999999999999999        77665

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.79  E-value=4.7e-10  Score=64.11  Aligned_cols=31  Identities=23%  Similarity=0.418  Sum_probs=28.9

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHP   31 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~   31 (317)
                      .++|.|++||+.|.+++.|.+|+++|++++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            3789999999999999999999999999875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.79  E-value=6.2e-10  Score=63.68  Aligned_cols=31  Identities=19%  Similarity=0.488  Sum_probs=29.0

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHP   31 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~   31 (317)
                      .++|.|++||+.|.+++.|.+|+++|++++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            3789999999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.5e-10  Score=65.55  Aligned_cols=29  Identities=31%  Similarity=0.382  Sum_probs=27.1

Q ss_pred             CCCCCCCc--ccCcCCCccccccccccccCC
Q 021090            1 MEKHKCKL--CTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         1 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      .|||+|++  |+|.|.+++.|++|||+|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            47999987  999999999999999999986

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.78  E-value=7.3e-10  Score=60.29  Aligned_cols=29  Identities=28%  Similarity=0.650  Sum_probs=27.3

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      +||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.78  E-value=1.4e-09  Score=63.92  Aligned_cols=30  Identities=40%  Similarity=0.778  Sum_probs=14.4

Q ss_pred             CCccccCCccccccCCcccccchhhhccCc
Q 021090          244 DEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       244 ~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +++||.|++||+.|.+.+.|..|+++|+++
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   32 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRD   32 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCC
Confidence            444444444444444444444444444443

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.78  E-value=1.5e-10  Score=75.89  Aligned_cols=55  Identities=0%  Similarity=-0.165  Sum_probs=42.4

Q ss_pred             cccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCCcc
Q 021090           19 LGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPK   84 (317)
Q Consensus        19 L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l~   84 (317)
                      |..|+++|++++||        .|..|++.|.....|.   ..|.++++|+|+.|+..|....++.
T Consensus         2 L~~h~~~H~~~k~~--------~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASF--------KCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEE--------ECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCc--------cCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            67788888888888        8888888887665554   6677778888888888887776664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.77  E-value=1.1e-09  Score=60.79  Aligned_cols=29  Identities=21%  Similarity=0.545  Sum_probs=27.3

Q ss_pred             CCCCCC--cccCcCCCccccccccccccCCC
Q 021090            2 EKHKCK--LCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|+  +||+.|.+.+.|.+|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            689998  99999999999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.77  E-value=1.2e-09  Score=59.84  Aligned_cols=30  Identities=17%  Similarity=0.393  Sum_probs=28.0

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHP   31 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~   31 (317)
                      ++|.|++||+.|.+.+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            689999999999999999999999998764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.3e-10  Score=64.86  Aligned_cols=31  Identities=26%  Similarity=0.538  Sum_probs=29.0

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHP   31 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~   31 (317)
                      .++|.|++||+.|.+++.|.+|+++|++++|
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3789999999999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.76  E-value=1.1e-09  Score=59.47  Aligned_cols=29  Identities=34%  Similarity=0.724  Sum_probs=27.4

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            68999999999999999999999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.4e-09  Score=62.67  Aligned_cols=33  Identities=36%  Similarity=0.642  Sum_probs=29.0

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      .|++++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            356889999999999999999999999999875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.76  E-value=2.1e-10  Score=72.87  Aligned_cols=51  Identities=6%  Similarity=-0.121  Sum_probs=42.1

Q ss_pred             cCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCC
Q 021090           10 TRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPE   68 (317)
Q Consensus        10 gk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   68 (317)
                      +|.|.....|..|+++|++++||        .|..|+..|.....|..|+.+|.++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~--------~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPA--------TCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCE--------ECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCc--------cCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            57889999999999999998888        7888888888777777777777777665

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.76  E-value=1.5e-09  Score=66.74  Aligned_cols=34  Identities=29%  Similarity=0.458  Sum_probs=30.1

Q ss_pred             ccccCCccccCC--ccccccCCcccccchhhhccCc
Q 021090          240 KVAADEKIFECP--FCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       240 ~~h~~ekpf~C~--~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      .+|++++||.|+  .||++|.+++.|..|+++|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            346699999996  6999999999999999999876

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=2.1e-09  Score=70.91  Aligned_cols=37  Identities=24%  Similarity=0.424  Sum_probs=32.9

Q ss_pred             ccccCCccccCCccccccCCcccccchhhhccCcccc
Q 021090          240 KVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANSS  276 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~  276 (317)
                      ..|.++|||+|.+|+|+|.++..|..|+++|+++...
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~   42 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQ   42 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccc
Confidence            3567899999999999999999999999999997543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.21  E-value=1.1e-09  Score=58.08  Aligned_cols=26  Identities=23%  Similarity=0.566  Sum_probs=24.7

Q ss_pred             CCCCCCcccCcCCCcccccccccccc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      |||.|++||+.|.+.+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999985

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.72  E-value=2.6e-09  Score=59.59  Aligned_cols=30  Identities=23%  Similarity=0.392  Sum_probs=27.8

Q ss_pred             CCCCCCC--cccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCK--LCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .+||.|+  .||+.|.+.+.|.+|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3799999  89999999999999999999874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.72  E-value=1.9e-09  Score=62.50  Aligned_cols=32  Identities=31%  Similarity=0.477  Sum_probs=28.5

Q ss_pred             ccCCccccCCc--cccccCCcccccchhhhccCc
Q 021090          242 AADEKIFECPF--CYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       242 h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |++++||.|.+  ||+.|.+.+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56899999985  999999999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.71  E-value=3e-09  Score=58.30  Aligned_cols=29  Identities=31%  Similarity=0.516  Sum_probs=27.1

Q ss_pred             CCCCCCcccCcCCCccccccc-cccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGH-MKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H-~r~H~~ek   30 (317)
                      +||.|++||+.|.+.+.|.+| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            689999999999999999999 79999874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.71  E-value=2.1e-09  Score=57.38  Aligned_cols=27  Identities=41%  Similarity=0.682  Sum_probs=24.3

Q ss_pred             CCCCCcccCcCCCccccccccccccCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      ||.|++||+.|.+++.|.+|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            699999999999999999999999874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.9e-09  Score=62.00  Aligned_cols=30  Identities=27%  Similarity=0.514  Sum_probs=27.9

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .++|.|++|++.|.+++.|.+|+++|++++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            378999999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.4e-09  Score=62.63  Aligned_cols=30  Identities=27%  Similarity=0.378  Sum_probs=27.8

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .+||.|++|++.|.+++.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            378999999999999999999999999874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.70  E-value=1.4e-09  Score=58.75  Aligned_cols=28  Identities=25%  Similarity=0.578  Sum_probs=26.3

Q ss_pred             CCCCCCCcccCcCCCccccccccccccC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      ++||.|++||+.|.+.+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5899999999999999999999999975

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.69  E-value=1.3e-09  Score=59.65  Aligned_cols=30  Identities=30%  Similarity=0.568  Sum_probs=27.8

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .+||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            379999999999999999999999999864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.69  E-value=9.3e-10  Score=59.83  Aligned_cols=29  Identities=24%  Similarity=0.579  Sum_probs=27.4

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      +||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            68999999999999999999999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.7e-09  Score=62.28  Aligned_cols=30  Identities=20%  Similarity=0.510  Sum_probs=27.8

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .++|.|++|++.|.+.+.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            378999999999999999999999999874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.8e-09  Score=62.07  Aligned_cols=30  Identities=20%  Similarity=0.348  Sum_probs=27.8

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .+||.|++|++.|.+++.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            378999999999999999999999999874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2e-09  Score=61.89  Aligned_cols=30  Identities=27%  Similarity=0.472  Sum_probs=27.8

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .+||+|++|++.|.+.+.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            378999999999999999999999999874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.9e-09  Score=62.81  Aligned_cols=32  Identities=22%  Similarity=0.348  Sum_probs=30.1

Q ss_pred             CCCCCCC--cccCcCCCccccccccccccCCCCC
Q 021090            1 MEKHKCK--LCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      .++|.|+  .||+.|.+.+.|.+|+++|++++||
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3789999  5999999999999999999999998

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=4.6e-09  Score=68.71  Aligned_cols=24  Identities=33%  Similarity=0.456  Sum_probs=14.0

Q ss_pred             cCcceechh--hhhhccCccchhhhh
Q 021090          205 TRGKYRCEK--CKKAFRSYHALGGHK  228 (317)
Q Consensus       205 ~~~~~~C~~--C~k~f~~~~~L~~H~  228 (317)
                      +++||+|..  |+|.|...+.|.+|+
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~   49 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHY   49 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHH
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHh
Confidence            555666643  666666666666664

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.63  E-value=3.4e-09  Score=59.26  Aligned_cols=29  Identities=31%  Similarity=0.584  Sum_probs=20.7

Q ss_pred             ccccCCccccccCCcccccchhhhccCcc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +||+|++||++|.+.+.|..|+++|+++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            46777777777777777777777776654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=1.8e-09  Score=57.85  Aligned_cols=27  Identities=22%  Similarity=0.513  Sum_probs=25.4

Q ss_pred             CCCCCCCcccCcCCCcccccccccccc
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      .+||.|++||+.|.+.+.|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            379999999999999999999999985

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.7e-09  Score=61.77  Aligned_cols=30  Identities=27%  Similarity=0.399  Sum_probs=27.7

Q ss_pred             CCCCCCCcccCcCCCc-cccccccccccCCC
Q 021090            1 MEKHKCKLCTRSFSNG-RALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~-~~L~~H~r~H~~ek   30 (317)
                      .++|.|++|++.|.++ +.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            3789999999999999 99999999999874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.62  E-value=5.6e-09  Score=58.84  Aligned_cols=25  Identities=32%  Similarity=0.635  Sum_probs=12.6

Q ss_pred             ceechhhhhhccCccchhhhhhhhh
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      ||.|.+||+.|...+.|..|+++|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhC
Confidence            4455555555555555555554443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=6.2e-09  Score=56.04  Aligned_cols=28  Identities=25%  Similarity=0.455  Sum_probs=23.9

Q ss_pred             CccccCCccccccCCcccccchhhhccC
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      ++||.|++||+.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4688999999999999999999888864

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=4.5e-09  Score=56.23  Aligned_cols=27  Identities=26%  Similarity=0.517  Sum_probs=21.7

Q ss_pred             CccccCCccccccCCcccccchhhhcc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      ++||+|++||++|.+.+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            467888888888888888888888774

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=5.5e-09  Score=60.82  Aligned_cols=33  Identities=30%  Similarity=0.474  Sum_probs=24.1

Q ss_pred             ccCCccccCC--ccccccCCcccccchhhhccCcc
Q 021090          242 AADEKIFECP--FCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       242 h~~ekpf~C~--~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |++++||.|.  .|++.|.+...|..|+++|+++.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            4477777777  47777777777777777777653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.61  E-value=2.5e-09  Score=57.19  Aligned_cols=27  Identities=22%  Similarity=0.465  Sum_probs=25.3

Q ss_pred             CCCCCCCcccCcCCCcccccccccccc
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      .+||.|++||+.|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            379999999999999999999999985

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=2.8e-09  Score=74.95  Aligned_cols=31  Identities=19%  Similarity=0.409  Sum_probs=18.0

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ++|.|++|++.|.+++.|.+|+++|++++||
T Consensus        24 kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~   54 (88)
T 1x6f_A           24 STYQCKHCDSKLQSTAELTSHLNIHNEEFQK   54 (88)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCEeCCHHHHHHHHHHhCCCCCc
Confidence            4555555555555555555555555555555

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.60  E-value=6.8e-09  Score=55.41  Aligned_cols=27  Identities=33%  Similarity=0.490  Sum_probs=22.9

Q ss_pred             CccccCCccccccCCcccccchhhhcc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      ++||.|++||+.|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478888888888888888888888874

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.60  E-value=8.5e-09  Score=56.27  Aligned_cols=29  Identities=21%  Similarity=0.432  Sum_probs=23.4

Q ss_pred             CccccCCccccccCCcccccchhhhccCc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ++||.|.+||+.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46788888888888888888888888765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.60  E-value=9.7e-09  Score=55.67  Aligned_cols=28  Identities=32%  Similarity=0.350  Sum_probs=22.3

Q ss_pred             ccccCCccccccCCcccccchhhhccCc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +||.|++||+.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5788888888888888888888888765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.59  E-value=6.7e-09  Score=59.58  Aligned_cols=28  Identities=25%  Similarity=0.337  Sum_probs=22.0

Q ss_pred             ccCCccccCCccccccCCcccccchhhh
Q 021090          242 AADEKIFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       242 h~~ekpf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      ++|+|||+|+.|||+|.+++.|.+|+..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py   30 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCe
Confidence            3578888888888888888888888743

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=5.9e-09  Score=56.63  Aligned_cols=28  Identities=32%  Similarity=0.489  Sum_probs=21.8

Q ss_pred             ccccCCccccccCCcccccchhhhccCc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +||.|++||+.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4778888888888888888888887764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=6.4e-09  Score=56.86  Aligned_cols=29  Identities=31%  Similarity=0.448  Sum_probs=23.0

Q ss_pred             CccccCCccccccCCcccccchhhhccCc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ++||.|++||+.|.+...|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36788888888888888888888888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=1.6e-08  Score=56.28  Aligned_cols=29  Identities=31%  Similarity=0.510  Sum_probs=24.7

Q ss_pred             CccccCC--ccccccCCcccccchhhhccCc
Q 021090          245 EKIFECP--FCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       245 ekpf~C~--~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ++||.|+  .||++|.+...|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4788898  7999999999999998888875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=3.6e-08  Score=64.89  Aligned_cols=31  Identities=23%  Similarity=0.394  Sum_probs=28.6

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHP   31 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~   31 (317)
                      .|||.|.+|+|.|.+++.|.+|+|+|+++..
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            3799999999999999999999999999754

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.57  E-value=1e-08  Score=59.23  Aligned_cols=35  Identities=20%  Similarity=0.337  Sum_probs=31.8

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhhc
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCET  233 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  233 (317)
                      |.+.|.++++|.|.+|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            56778899999999999999999999999998874

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.55  E-value=1.3e-08  Score=55.15  Aligned_cols=28  Identities=32%  Similarity=0.609  Sum_probs=22.9

Q ss_pred             ccccCCccccccCCcccccchhhhccCc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +||.|++||+.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4788888888888888888888888765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.96  E-value=8.6e-09  Score=54.44  Aligned_cols=26  Identities=35%  Similarity=0.512  Sum_probs=20.7

Q ss_pred             ccccCCccccccCCcccccchhhhcc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      |||.|++||++|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57888888888888888888888774

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.54  E-value=1.4e-08  Score=54.83  Aligned_cols=28  Identities=32%  Similarity=0.587  Sum_probs=22.6

Q ss_pred             ccccCCccccccCCcccccchhhhccCc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +||.|++||++|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5788888888888888888888888765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.53  E-value=1.8e-08  Score=53.55  Aligned_cols=27  Identities=30%  Similarity=0.591  Sum_probs=21.6

Q ss_pred             cccCCccccccCCcccccchhhhccCc
Q 021090          247 IFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ||+|++||+.|.+...|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            688888888888888888888888763

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.52  E-value=5.9e-09  Score=60.38  Aligned_cols=30  Identities=20%  Similarity=0.596  Sum_probs=27.4

Q ss_pred             CCCCCCCc--ccCcCCCccccccccccccCCC
Q 021090            1 MEKHKCKL--CTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         1 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .+||.|++  |||.|.+++.|.+|+++|++++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            37899995  9999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.51  E-value=2.2e-08  Score=55.24  Aligned_cols=28  Identities=36%  Similarity=0.657  Sum_probs=23.9

Q ss_pred             ccccCC--ccccccCCcccccchhhhccCc
Q 021090          246 KIFECP--FCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~--~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +||.|+  .||++|.+.+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            578887  8999999888898898888875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.51  E-value=9.3e-09  Score=63.43  Aligned_cols=32  Identities=25%  Similarity=0.471  Sum_probs=26.8

Q ss_pred             CCCCCCCcccCcCCCccccccccc-cccCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMK-AHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r-~H~~ek~~   32 (317)
                      .|||.|.+|||.|.+++.|.+|++ +|+++.+-
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            379999999999999999999999 99987654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=1.6e-08  Score=54.66  Aligned_cols=28  Identities=29%  Similarity=0.360  Sum_probs=20.4

Q ss_pred             ccccCCccccccCCcccccchhhhccCc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4677777777777777777777777654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.46  E-value=3.5e-08  Score=53.68  Aligned_cols=29  Identities=17%  Similarity=0.401  Sum_probs=22.9

Q ss_pred             ccccCCccccccCCcccccchhhhccCcc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      +||.|++||+.|.....|..|+++|+++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47888888888888888888888887653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=5.5e-08  Score=53.00  Aligned_cols=28  Identities=25%  Similarity=0.510  Sum_probs=23.0

Q ss_pred             ccccCCccccccCCcccccch-hhhccCc
Q 021090          246 KIFECPFCYKVFGSGQALGGH-KRSHLLA  273 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H-~~~H~~~  273 (317)
                      +||.|+.||+.|.+.+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            478888888888888888888 6888765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=3.3e-08  Score=57.14  Aligned_cols=33  Identities=15%  Similarity=0.238  Sum_probs=29.6

Q ss_pred             hhhccCcceechhhhhhccCccchhhh-hhhhhc
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGH-KKVCET  233 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~  233 (317)
                      ++|.+++||+|.+|++.|...+.|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            357789999999999999999999999 888874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=3.4e-08  Score=60.47  Aligned_cols=29  Identities=24%  Similarity=0.610  Sum_probs=24.4

Q ss_pred             CCCCCC--cccCcCCCccccccccccccCCC
Q 021090            2 EKHKCK--LCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      +||.|+  .|||.|.+++.|.+|+++|++++
T Consensus        17 k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            678895  69999999999999999888764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.38  E-value=2.2e-08  Score=54.16  Aligned_cols=27  Identities=37%  Similarity=0.591  Sum_probs=25.5

Q ss_pred             CCCCCC--cccCcCCCccccccccccccC
Q 021090            2 EKHKCK--LCTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         2 k~~~C~--~Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      ++|.|+  +||+.|.+.+.|.+|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            689999  999999999999999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=6.2e-09  Score=70.88  Aligned_cols=67  Identities=10%  Similarity=-0.012  Sum_probs=56.5

Q ss_pred             ccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCCCCCCccccccccCCc
Q 021090           16 GRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYGLRNNPKKSFRFADPE   93 (317)
Q Consensus        16 ~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~~~~~l~~H~~~~~~~   93 (317)
                      ++.|..|+++|.+++|+        .|..|+..|. ...|..|. .+-+.++|.|+.|++.|. +..|..|++.+...
T Consensus         2 ~~~L~~H~~~~c~~r~~--------~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLA--------VCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCSCCCCCCCCCCCE--------ECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             chHHHhhCcccCCCccc--------CCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            56889999999999999        8999998884 67778888 788889999999999876 68999999877653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.34  E-value=7.3e-08  Score=55.17  Aligned_cols=25  Identities=32%  Similarity=0.615  Sum_probs=23.6

Q ss_pred             ccCcceechhhhhhccCccchhhhh
Q 021090          204 LTRGKYRCEKCKKAFRSYHALGGHK  228 (317)
Q Consensus       204 ~~~~~~~C~~C~k~f~~~~~L~~H~  228 (317)
                      .+++||.|.+|||.|.+.+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4789999999999999999999997

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.25  E-value=1.4e-07  Score=50.76  Aligned_cols=27  Identities=26%  Similarity=0.534  Sum_probs=20.5

Q ss_pred             ccccCC--ccccccCCcccccchhhhccC
Q 021090          246 KIFECP--FCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       246 kpf~C~--~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      +||.|.  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            467777  788888888888888777763

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.38  E-value=2.4e-05  Score=57.52  Aligned_cols=29  Identities=24%  Similarity=0.344  Sum_probs=24.2

Q ss_pred             cccCCccccCCccccccCCcccccchhhh
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      .|+|++||.|..|+|.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            35588889999999999999998888874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.17  E-value=7e-05  Score=56.03  Aligned_cols=63  Identities=16%  Similarity=0.278  Sum_probs=50.4

Q ss_pred             CcceechhhhhhccCccchhhhh--hhhhccc--------------------ccccccccCCccccCCccccccCCcccc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHK--KVCETNI--------------------NAGTKVAADEKIFECPFCYKVFGSGQAL  263 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~--~~H~~~~--------------------~~H~~~h~~ekpf~C~~C~k~F~~~~~L  263 (317)
                      .+++.|.+|+..|.+.+.+..|+  +.|....                    ..+...+.+.+.|-|.+|++.|.+...|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            46799999999999999999999  6675432                    0122245567889999999999999999


Q ss_pred             cchhh
Q 021090          264 GGHKR  268 (317)
Q Consensus       264 ~~H~~  268 (317)
                      ..|.+
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99975

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.77  E-value=0.00023  Score=46.24  Aligned_cols=54  Identities=13%  Similarity=0.122  Sum_probs=40.9

Q ss_pred             hhhhhhccCccchhhhhh-hhhcccccccccccCCccccCC--ccccccCCcccccchhhhc
Q 021090          212 EKCKKAFRSYHALGGHKK-VCETNINAGTKVAADEKIFECP--FCYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       212 ~~C~k~f~~~~~L~~H~~-~H~~~~~~H~~~h~~ekpf~C~--~C~k~F~~~~~L~~H~~~H  270 (317)
                      ..|++.|.+...|..|+. .|.+....     ....+|.|.  .|++.+.....|..|+++.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~-----~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFK-----HPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCC-----CSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccC-----CCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            459999999999999984 56421000     011389998  8999999999999999864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.61  E-value=0.00032  Score=41.22  Aligned_cols=28  Identities=29%  Similarity=0.464  Sum_probs=24.4

Q ss_pred             CCCCCcccCcCCCccccccccccccCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      +|.|+.|++.|.....|+.||+---++.
T Consensus        12 ~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             ceeCCcccccccchHHHHhhhhhcCcch
Confidence            6899999999999999999999655443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.31  E-value=0.00058  Score=50.14  Aligned_cols=30  Identities=23%  Similarity=0.253  Sum_probs=26.8

Q ss_pred             hhccCcceechhhhhhccCccchhhhhhhh
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      .+++.++|.|..|++.|.+.+.|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            355889999999999999999999999764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.81  E-value=0.0019  Score=37.96  Aligned_cols=22  Identities=36%  Similarity=0.542  Sum_probs=11.9

Q ss_pred             cccCCccccccCCcccccchhh
Q 021090          247 IFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      +|.|+.|++.|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4555555555555555555554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.48  E-value=0.00031  Score=52.48  Aligned_cols=81  Identities=7%  Similarity=0.135  Sum_probs=52.2

Q ss_pred             CCCCCCcccCcCCCcccccccc--ccccCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccCcCCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHM--KAHLAA-HPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAEEKSLGYG   78 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~--r~H~~e-k~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~c~~~f~   78 (317)
                      +++.|.+|+..|.+.+.+..|.  +.|... +.+.......  -..-+..+.    ...+...+.....|.|..|...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGE--DSVPAKKFK----AAPAEISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCC--CCCSCCCCS----CCSSCCSSCCCTTTEETTTTEECS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcc--cCCCCCccC----CCccccccCCCCCeEcCCCCCEeC
Confidence            5788999999999999999999  567542 2221100000  000111111    112344566778899999999999


Q ss_pred             CCCCcccccc
Q 021090           79 LRNNPKKSFR   88 (317)
Q Consensus        79 ~~~~l~~H~~   88 (317)
                      ....+..|+.
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            9998888854

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.28  E-value=0.0014  Score=42.45  Aligned_cols=57  Identities=18%  Similarity=0.128  Sum_probs=41.1

Q ss_pred             CCCC--cccCcCCCccccccccc-cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCccC--cCCCCCC
Q 021090            4 HKCK--LCTRSFSNGRALGGHMK-AHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVEVKGKSPEVAE--EKSLGYG   78 (317)
Q Consensus         4 ~~C~--~Cgk~F~~~~~L~~H~r-~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~--~c~~~f~   78 (317)
                      |.|.  .|++.|.+...|..|+. .|.+.++-                              .....|.|.  .|+..+.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~------------------------------~~~~~~~C~W~~C~~~~~   51 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFK------------------------------HPMEPLACNWEDCDFLGD   51 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC------------------------------CSSCCEECCCSSCCCEES
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccC------------------------------CCCCCCEeeCCCCcCCCC
Confidence            4565  59999999999999994 89865421                              012367885  7887777


Q ss_pred             CCCCcccccccc
Q 021090           79 LRNNPKKSFRFA   90 (317)
Q Consensus        79 ~~~~l~~H~~~~   90 (317)
                      ....|..|++..
T Consensus        52 ~~~~L~~Hir~~   63 (64)
T 1zw8_A           52 DTASIVNHINAQ   63 (64)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             ChHHHHhhcccc
Confidence            777788887754

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.14  E-value=0.024  Score=31.17  Aligned_cols=27  Identities=37%  Similarity=0.535  Sum_probs=17.5

Q ss_pred             cccCCccccccCCcccccchh-hhccCc
Q 021090          247 IFECPFCYKVFGSGQALGGHK-RSHLLA  273 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~-~~H~~~  273 (317)
                      .|.|++|-+.|.+...|..|. ..|..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            377777777777777777774 345443

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=92.99  E-value=0.015  Score=39.42  Aligned_cols=26  Identities=31%  Similarity=0.551  Sum_probs=22.1

Q ss_pred             CCCCcccCcCCCccccccccccccCCCCC
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      ..|-+|||.|.   .|.+|+++|+|..|.
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltpe   47 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTPE   47 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCHH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCHH
Confidence            46999999998   589999998887663

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.29  E-value=0.067  Score=41.75  Aligned_cols=58  Identities=16%  Similarity=0.223  Sum_probs=44.5

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhccCccc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .-++..|..|+..+ .+..|..|+...-           ..++-.|+.|+..|.. ..|..|..++.|+-.
T Consensus       107 ~~~~v~C~~C~~~~-~r~~l~~H~~~~C-----------~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          107 EFALMDCPQCQRPF-QKFHINIHILKDC-----------PRRQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             TTSEEECTTTCCEE-EGGGHHHHHHHTC-----------TTCEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             CceeeECCCCChHH-HHHHHHHHhhhhC-----------CCCCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            45778999999988 5667889985332           6888999999998855 667899999988754

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.92  E-value=0.034  Score=30.57  Aligned_cols=25  Identities=24%  Similarity=0.429  Sum_probs=21.9

Q ss_pred             CCCCCcccCcCCCccccccccc-ccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK-AHL   27 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r-~H~   27 (317)
                      -|.|++|-+.|.+...|..|-. .|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            3889999999999999999976 554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.13  E-value=0.12  Score=34.17  Aligned_cols=48  Identities=19%  Similarity=0.471  Sum_probs=35.6

Q ss_pred             ceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhh
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      -|.|+.||.+++.+. |..|.....           +-..|.|-.|++.|.. ..++.|-.
T Consensus        10 ~F~C~~Cgd~lKK~k-v~~H~~~Cr-----------~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A           10 FFTCNACGESVKKIQ-VEKHVSNCR-----------NCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             EEEESSSCCEEETTH-HHHHHHHCT-----------TCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             EEEcCCCCCeeeccc-chhHHhhCC-----------CCCcEEecccCCeeCC-CCEeCEee
Confidence            489999998877654 778876543           4457999999999985 45666643

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=87.89  E-value=0.14  Score=29.15  Aligned_cols=27  Identities=19%  Similarity=0.304  Sum_probs=22.1

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhh
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      ....|.|..||+.|.. ..+..|...|.
T Consensus         6 ~~~~~~C~~C~~~i~~-~~~~EH~D~H~   32 (39)
T 2i5o_A            6 AEDQVPCEKCGSLVPV-WDMPEHMDYHF   32 (39)
T ss_dssp             CCCEEECTTTCCEEEG-GGHHHHHHHHH
T ss_pred             cCCCcccccccCcCCc-ccccchhhHHH
Confidence            4456899999999998 56789998885

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.17  E-value=0.21  Score=33.87  Aligned_cols=26  Identities=23%  Similarity=0.337  Sum_probs=19.2

Q ss_pred             CccccCCccccccCCcccccchhhhccCc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +.-..|-+|||.|.   .|++|+++|+|-
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgl   44 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSM   44 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCS
T ss_pred             CCceEecccchhhH---HHHHHHHHccCC
Confidence            33468889999888   577898886443

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=85.41  E-value=0.4  Score=33.65  Aligned_cols=34  Identities=21%  Similarity=0.365  Sum_probs=25.3

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQ  261 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~  261 (317)
                      -.+|+|..||..|. ..                     -.+|-+|+.|+......-
T Consensus        65 v~p~~C~~CG~~F~-~~---------------------~~kPsrCP~CkSe~Ie~P   98 (105)
T 2gmg_A           65 IKPAQCRKCGFVFK-AE---------------------INIPSRCPKCKSEWIEEP   98 (105)
T ss_dssp             ECCCBBTTTCCBCC-CC---------------------SSCCSSCSSSCCCCBCCC
T ss_pred             EECcChhhCcCeec-cc---------------------CCCCCCCcCCCCCccCCc
Confidence            46899999999991 11                     367899999987665443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	317
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-09
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	6e-08
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	6e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 50.5 bits (121), Expect = 1e-09
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 246 KIFECPFCYKVFGSGQALGGHKRSH 270
           + + C FC + F S QALGGH   H
Sbjct: 4   RSYTCSFCKREFRSAQALGGHMNVH 28

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.9 bits (109), Expect = 6e-08
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 3  KHKCKLCTRSFSNGRALGGHMKAH 26
           + C  C R F + +ALGGHM  H
Sbjct: 5  SYTCSFCKREFRSAQALGGHMNVH 28

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.4 bits (87), Expect = 6e-05
 Identities = 13/23 (56%), Positives = 14/23 (60%)

Query: 208 KYRCEKCKKAFRSYHALGGHKKV 230
            Y C  CK+ FRS  ALGGH  V
Sbjct: 5   SYTCSFCKREFRSAQALGGHMNV 27

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.002
 Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 12/62 (19%)

Query: 209 YRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKR 268
           Y C+ C K+F        H  +                 + C  C K F     L GH +
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRP-----------YGCGVCGKKFKMKHHLVGHMK 51

Query: 269 SH 270
            H
Sbjct: 52  IH 53

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	317
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.73
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.56
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.52
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.51
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.49
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.47
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.46
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.44
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.43
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.42
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.37
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.36
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.32
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.31
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.3
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.26
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.25
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.24
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.24
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.23
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.23
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.2
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.18
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.17
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.13
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.12
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.1
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	99.1
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.07
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.04
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.0
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.98
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.95
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.94
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.94
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.88
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.87
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.72
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.6
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.6
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.48
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.4
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.39
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.23
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.23
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.22
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.14
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.1
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.05
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.99
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.96
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.96
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.91
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.87
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.86
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.84
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.83
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.81
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.79
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.76
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.72
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.65
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.61
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.61
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.56
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.47
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.35
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.29
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.03
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.93
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.89
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.88
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.8
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.68
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.66
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.55
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.5
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.44
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.37
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.34
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.21
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.17
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.03
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.66
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.51
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.39
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.26
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.11
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.39
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.39
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.0
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.51
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.31
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.99
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.21
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.03
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.82
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.15
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.13
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.93
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.04
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.44
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.43
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	85.74
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.41
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	82.48
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	80.56

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.6e-19  Score=113.39  Aligned_cols=53  Identities=26%  Similarity=0.490  Sum_probs=50.4

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccccCCcccccchhhhc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H  270 (317)
                      ++||+|+ ||+.|.....|..|+++|+           |++||.|.+||++|.+.+.|..||++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht-----------~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL-----------GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS-----------CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc-----------cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 9999999999999998776           999999999999999999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.4e-16  Score=89.70  Aligned_cols=37  Identities=22%  Similarity=0.417  Sum_probs=34.9

Q ss_pred             cccccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          237 AGTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       237 ~H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +|+++|+++|||+|++|||+|.+.+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5778888999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.3e-16  Score=84.28  Aligned_cols=33  Identities=30%  Similarity=0.474  Sum_probs=31.3

Q ss_pred             cccCCccccCCccccccCCcccccchhhhccCc
Q 021090          241 VAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       241 ~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ||+|+|||+|.+|||+|.+++.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            578999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=6.7e-17  Score=101.22  Aligned_cols=52  Identities=19%  Similarity=0.261  Sum_probs=41.5

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAAHPLPPKTNQQQQPSDSTESASTSSSSSGEGVE   61 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   61 (317)
                      .|||+|+ |||.|.+++.|.+|+++|++++||        .|..|++.|.....|..||++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy--------~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY--------GCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSE--------ECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCC--------cCCCcCCEecCHHHHHHHHhc
Confidence            3899995 999999999999999999999999        666666666655555555544

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=3e-15  Score=85.02  Aligned_cols=35  Identities=31%  Similarity=0.643  Sum_probs=32.7

Q ss_pred             ccccccCCccccCCccccccCCcccccchhhhccC
Q 021090          238 GTKVAADEKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       238 H~~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      |.++|+|||||+|++||++|.+++.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            66888899999999999999999999999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.1e-15  Score=84.36  Aligned_cols=35  Identities=29%  Similarity=0.420  Sum_probs=32.3

Q ss_pred             ccccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          240 KVAADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      ++|+|||||+|.+||++|.+++.|..|+++|++++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46889999999999999999999999999998764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.46  E-value=2.9e-15  Score=79.71  Aligned_cols=29  Identities=28%  Similarity=0.650  Sum_probs=28.2

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|++|||.|.+++.|++|||+|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            79999999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=6.6e-15  Score=78.14  Aligned_cols=29  Identities=28%  Similarity=0.589  Sum_probs=28.1

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|++|||.|.++++|.+|+|+|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            79999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=6.3e-15  Score=84.06  Aligned_cols=32  Identities=31%  Similarity=0.614  Sum_probs=30.5

Q ss_pred             CCCCCCCcccCcCCCccccccccc-cccCCCCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMK-AHLAAHPL   32 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r-~H~~ek~~   32 (317)
                      .|||+|.+|||.|.++++|++||| +|++||||
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy   35 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH   35 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCc
Confidence            389999999999999999999986 89999999

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=1.5e-14  Score=80.35  Aligned_cols=33  Identities=18%  Similarity=0.402  Sum_probs=30.6

Q ss_pred             ccCCccccCCccccccCCcccccchhhhccCcc
Q 021090          242 AADEKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       242 h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+|+|||+|++|+|+|.++++|++|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            679999999999999999999999999998753

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4.3e-14  Score=79.40  Aligned_cols=34  Identities=21%  Similarity=0.353  Sum_probs=29.3

Q ss_pred             ccccCCccccCCccccccCCcccccchhhhccCc
Q 021090          240 KVAADEKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       240 ~~h~~ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ++|+|||||+|++||++|.++++|++|++.|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4688999999999999999999999997654443

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4.6e-14  Score=80.41  Aligned_cols=37  Identities=32%  Similarity=0.631  Sum_probs=33.0

Q ss_pred             cCcceechhhhhhccCccchhhhhh-hhhcccccccccccCCccccCCc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKK-VCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      .++||+|.+|||.|...+.|++|++ +|+           |+|||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht-----------~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT-----------SERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC-----------CCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC-----------CCcCcCCcC
Confidence            5789999999999999999999985 454           999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=6.5e-14  Score=73.41  Aligned_cols=28  Identities=32%  Similarity=0.647  Sum_probs=24.8

Q ss_pred             CccccCCccccccCCcccccchhhhccC
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      ||||+|++|||+|.+++.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6889999999999999999999999876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=3.2e-14  Score=74.63  Aligned_cols=28  Identities=29%  Similarity=0.739  Sum_probs=26.8

Q ss_pred             CCCCCCCcccCcCCCccccccccccccC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      .|||+|++|||.|.++++|.+|||+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3899999999999999999999999987

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.30  E-value=2.2e-13  Score=72.29  Aligned_cols=29  Identities=31%  Similarity=0.597  Sum_probs=25.1

Q ss_pred             ccccCCccccccCCcccccchhhhccCcc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |||+|++|||+|.+++.|++|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68889999999999999999999998874

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=5.2e-13  Score=70.67  Aligned_cols=29  Identities=34%  Similarity=0.574  Sum_probs=24.3

Q ss_pred             ccccCCccccccCCcccccchhhhccCcc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |||.|++|||+|.+++.|.+|+++|+++.
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68888888888888888888888888863

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=3.4e-13  Score=71.85  Aligned_cols=28  Identities=32%  Similarity=0.744  Sum_probs=27.1

Q ss_pred             CCCCCCc--ccCcCCCccccccccccccCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      |||.|++  |||.|.++++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            7999999  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=4.5e-13  Score=72.16  Aligned_cols=29  Identities=21%  Similarity=0.545  Sum_probs=27.3

Q ss_pred             CCCCCC--cccCcCCCccccccccccccCCC
Q 021090            2 EKHKCK--LCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|+  .|||.|.+.++|++|||+|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            799996  59999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.2e-13  Score=70.38  Aligned_cols=26  Identities=31%  Similarity=0.571  Sum_probs=25.2

Q ss_pred             CCCCCCcccCcCCCcccccccccccc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      |||+|.+|||.|.+++.|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=6.4e-13  Score=79.25  Aligned_cols=33  Identities=33%  Similarity=0.632  Sum_probs=30.6

Q ss_pred             ccCCccccCCc--cccccCCcccccchhhhccCcc
Q 021090          242 AADEKIFECPF--CYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       242 h~~ekpf~C~~--C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |+|+|||+|++  |+|+|.+++.|..|+++|+|+.
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            55999999988  9999999999999999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=5.3e-13  Score=76.13  Aligned_cols=29  Identities=31%  Similarity=0.613  Sum_probs=26.7

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      .|||+|++|||.|.+.++|.+|+|+|+||
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          10 RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            38999999999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.1e-13  Score=72.15  Aligned_cols=28  Identities=25%  Similarity=0.567  Sum_probs=26.9

Q ss_pred             CCCCCCc--ccCcCCCccccccccccccCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      |||.|++  |||.|.++++|++|||+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            7999998  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1e-12  Score=66.95  Aligned_cols=26  Identities=35%  Similarity=0.599  Sum_probs=22.3

Q ss_pred             ccccCCccccccCCcccccchhhhcc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      |||+|..|||+|.+++.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68888888888888888888888885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.8e-12  Score=70.73  Aligned_cols=32  Identities=31%  Similarity=0.503  Sum_probs=30.1

Q ss_pred             hhccCcceechhhhhhccCccchhhhhhhhhc
Q 021090          202 IKLTRGKYRCEKCKKAFRSYHALGGHKKVCET  233 (317)
Q Consensus       202 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  233 (317)
                      +|++++||.|.+|||.|.+.+.|..|+++|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            57899999999999999999999999999884

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.4e-12  Score=72.80  Aligned_cols=30  Identities=30%  Similarity=0.530  Sum_probs=28.5

Q ss_pred             CCCCCc--ccCcCCCccccccccccccCCCCC
Q 021090            3 KHKCKL--CTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         3 ~~~C~~--Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      .|.|++  |||.|.+++.|++|||+|+|||||
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy   32 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   32 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCE
Confidence            378987  999999999999999999999999

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=2.4e-12  Score=71.21  Aligned_cols=29  Identities=21%  Similarity=0.539  Sum_probs=27.3

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      .|||+|++|+|.|.++++|++|||+|+.+
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CccccCCCCCCcccChHHHHHHccccCCc
Confidence            48999999999999999999999999975

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=6.1e-12  Score=66.88  Aligned_cols=28  Identities=36%  Similarity=0.565  Sum_probs=25.4

Q ss_pred             ccccCCc--cccccCCcccccchhhhccCc
Q 021090          246 KIFECPF--CYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |||+|++  |||+|.+++.|++|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899998  999999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=5.9e-12  Score=60.56  Aligned_cols=26  Identities=38%  Similarity=0.827  Sum_probs=25.0

Q ss_pred             CCCCCcccCcCCCccccccccccccC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      |++|++|+|.|+++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            78999999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=6.3e-12  Score=66.98  Aligned_cols=28  Identities=39%  Similarity=0.574  Sum_probs=24.1

Q ss_pred             ccccCCc--cccccCCcccccchhhhccCc
Q 021090          246 KIFECPF--CYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |||.|++  |||+|.+++.|++|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6888887  888888888888888888875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=1.4e-11  Score=69.57  Aligned_cols=34  Identities=21%  Similarity=0.359  Sum_probs=32.3

Q ss_pred             hhhhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          199 SEEIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       199 ~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      |.++|++++||+|.+|++.|.+++.|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            6788999999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=1.4e-11  Score=69.11  Aligned_cols=32  Identities=28%  Similarity=0.482  Sum_probs=30.4

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      ++|++++||+|.+||+.|...+.|..|+++|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            57899999999999999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.8e-11  Score=63.59  Aligned_cols=26  Identities=23%  Similarity=0.608  Sum_probs=25.1

Q ss_pred             CCCCCCc--ccCcCCCcccccccccccc
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~   27 (317)
                      |||.|++  |||.|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999998  9999999999999999996

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=6.6e-12  Score=66.11  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=26.0

Q ss_pred             CCCCCCc--ccCcCCCccccccccccccC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      |||.|++  |||.|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999998  99999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=3.1e-11  Score=64.82  Aligned_cols=29  Identities=34%  Similarity=0.644  Sum_probs=25.3

Q ss_pred             ccccCC--ccccccCCcccccchhhhccCcc
Q 021090          246 KIFECP--FCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       246 kpf~C~--~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      |||.|+  -|||+|.+.+.|.+|+++|+|+.
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  49999999999999999999874

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=2.8e-11  Score=67.47  Aligned_cols=33  Identities=30%  Similarity=0.692  Sum_probs=30.2

Q ss_pred             eechh--hhhhccCccchhhhhhhhhcccccccccccCCccccCCc
Q 021090          209 YRCEK--CKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPF  252 (317)
Q Consensus       209 ~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~  252 (317)
                      |.|..  ||+.|.+++.|++|+++|+           |+|||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht-----------gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS-----------DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH-----------TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC-----------CCCCEeCCC
Confidence            78987  9999999999999998887           999999974

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=1.9e-11  Score=72.73  Aligned_cols=29  Identities=24%  Similarity=0.683  Sum_probs=25.3

Q ss_pred             CCCCCCc--ccCcCCCccccccccccccCCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      |||.|++  |||.|.++++|.+|||+|+|||
T Consensus        17 kpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            7889987  9999999999999999998875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=6.1e-11  Score=57.00  Aligned_cols=26  Identities=31%  Similarity=0.493  Sum_probs=23.6

Q ss_pred             cccCCccccccCCcccccchhhhccC
Q 021090          247 IFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      |.+|++|+|.|.++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=7.5e-11  Score=63.57  Aligned_cols=29  Identities=24%  Similarity=0.444  Sum_probs=26.8

Q ss_pred             CCCCCCCc--ccCcCCCccccccccccccCC
Q 021090            1 MEKHKCKL--CTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         1 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      .|||.|++  |||.|.+.++|.+|+|+|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            38999999  999999999999999999863

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=1.1e-10  Score=62.90  Aligned_cols=29  Identities=31%  Similarity=0.568  Sum_probs=25.9

Q ss_pred             CccccCCc--cccccCCcccccchhhhccCc
Q 021090          245 EKIFECPF--CYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       245 ekpf~C~~--C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ||||.|++  |||+|.+.+.|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=7.5e-11  Score=61.98  Aligned_cols=27  Identities=30%  Similarity=0.616  Sum_probs=23.1

Q ss_pred             ccccCCc--cccccCCcccccchhhhccC
Q 021090          246 KIFECPF--CYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~~~H~~  272 (317)
                      |||+|++  |||+|.+.+.|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6888887  88888888888888888876

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=1.1e-10  Score=65.12  Aligned_cols=32  Identities=16%  Similarity=0.234  Sum_probs=28.8

Q ss_pred             hhhccCcceechhhhhhccCccchhhhhhhhh
Q 021090          201 EIKLTRGKYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       201 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      ++|++++||+|.+|++.|..++.|++|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            46899999999999999999999999986543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2e-10  Score=59.56  Aligned_cols=26  Identities=35%  Similarity=0.770  Sum_probs=22.3

Q ss_pred             ccccCCc--cccccCCcccccchhhhcc
Q 021090          246 KIFECPF--CYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~~~H~  271 (317)
                      |||.|++  |||+|.+.+.|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6888888  8888888888888888885

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=1.1e-09  Score=54.48  Aligned_cols=27  Identities=33%  Similarity=0.652  Sum_probs=23.6

Q ss_pred             CccccCCccccccCCcccccchhhhcc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      ||||.|++||+.|.+....++|.++|+
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            688999999999999888888888886

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.3e-09  Score=56.29  Aligned_cols=31  Identities=23%  Similarity=0.536  Sum_probs=29.1

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHPL   32 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~~   32 (317)
                      |...|.+|||.|.....|++|..+|++|+||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4467999999999999999999999999999

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=1.7e-09  Score=53.76  Aligned_cols=27  Identities=30%  Similarity=0.619  Sum_probs=25.6

Q ss_pred             CCCCCCCcccCcCCCcccccccccccc
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      .|||.|++||+.|++....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            389999999999999999999999996

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=3e-09  Score=52.69  Aligned_cols=28  Identities=21%  Similarity=0.375  Sum_probs=26.6

Q ss_pred             CCCCCcccCcCCCccccccccccccCCC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      +|.|++||..-.-++.|+.|+|+|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            5999999999999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=6.7e-09  Score=50.83  Aligned_cols=28  Identities=25%  Similarity=0.504  Sum_probs=25.8

Q ss_pred             CCCCCCcccCcCCCccccccccccccCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      |-+.|.+|||.|.-.+.|++|+.+|+||
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            3578999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.3e-08  Score=50.01  Aligned_cols=29  Identities=31%  Similarity=0.444  Sum_probs=26.0

Q ss_pred             CccccCCccccccCCcccccchhhhccCc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +|||+|.+|.++-+..+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=7.8e-09  Score=52.05  Aligned_cols=29  Identities=17%  Similarity=0.424  Sum_probs=27.0

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      .|||.|++|+.+|.++..+.-|.|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            38999999999999999999999999874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1.9e-08  Score=50.62  Aligned_cols=30  Identities=33%  Similarity=0.489  Sum_probs=25.6

Q ss_pred             CccccCCccccccCCcccccchhhhccCcc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLLAN  274 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~  274 (317)
                      ||||.|++|+..|.++..+.-|.|+|-|..
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~v   30 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSV   30 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCcc
Confidence            578999999999999998888998887764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.23  E-value=6.3e-08  Score=46.61  Aligned_cols=26  Identities=23%  Similarity=0.475  Sum_probs=24.9

Q ss_pred             CCCcccCcCCCccccccccccccCCC
Q 021090            5 KCKLCTRSFSNGRALGGHMKAHLAAH   30 (317)
Q Consensus         5 ~C~~Cgk~F~~~~~L~~H~r~H~~ek   30 (317)
                      .|+.|.|.|.++..|+.|-|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.23  E-value=5.3e-08  Score=53.03  Aligned_cols=30  Identities=37%  Similarity=0.809  Sum_probs=27.5

Q ss_pred             CCCCCCcccCcCCCccccccccccccCCCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAAHP   31 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek~   31 (317)
                      |.|.|.+|+|.|.+...|.-||+.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            679999999999999999999999987654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.3e-07  Score=48.72  Aligned_cols=33  Identities=36%  Similarity=0.559  Sum_probs=27.5

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcccccccccccCCcccc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFE  249 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~  249 (317)
                      .+...|+.|||.|..-..|.+|...|+           |||||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs-----------~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHS-----------GEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSC-----------SCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccC-----------CCCCCC
Confidence            356789999999999999999986665           999983

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=1.3e-07  Score=46.14  Aligned_cols=26  Identities=27%  Similarity=0.351  Sum_probs=17.2

Q ss_pred             ccCCccccccCCcccccchhhhccCc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      ..|..|||+|...+.|++|+-+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45666677777666677776666654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=9.8e-08  Score=46.88  Aligned_cols=29  Identities=24%  Similarity=0.524  Sum_probs=27.0

Q ss_pred             CCCCCCCcccCcCCCccccccccccccCC
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      .|||+|..|...-...++|..|+|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            38999999999999999999999999974

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=2.8e-07  Score=44.33  Aligned_cols=25  Identities=44%  Similarity=0.568  Sum_probs=18.0

Q ss_pred             cCCccccccCCcccccchhhhccCc
Q 021090          249 ECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       249 ~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +|+.|.|+|.++.+|+.|-|.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            5777777777777777777777765

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=3.6e-07  Score=44.46  Aligned_cols=26  Identities=27%  Similarity=0.471  Sum_probs=24.1

Q ss_pred             ccccCCccccccCCcccccchhhhcc
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      |||+|..|.++-.-.+.|++|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999986

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.5e-07  Score=47.37  Aligned_cols=27  Identities=30%  Similarity=0.616  Sum_probs=24.8

Q ss_pred             CCCCCCc--ccCcCCCccccccccccccC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      |||.|.+  |+|++..+++|++||++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            7999998  99999999999999997764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.7e-07  Score=45.61  Aligned_cols=27  Identities=26%  Similarity=0.588  Sum_probs=25.9

Q ss_pred             CCCCCCCcccCcCCCcccccccccccc
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      +|||+|..|...-...++|+.|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            699999999999999999999999995

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.99  E-value=7.4e-07  Score=48.43  Aligned_cols=31  Identities=39%  Similarity=0.775  Sum_probs=24.7

Q ss_pred             CccccCCccccccCCcccccchhhhccCccc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLLANS  275 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~~~~  275 (317)
                      .+.|+|.+|++.|.+..+|-.||+.|..+..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3568888888888888888888888877654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.96  E-value=9.8e-07  Score=41.68  Aligned_cols=24  Identities=33%  Similarity=0.731  Sum_probs=18.0

Q ss_pred             ccCCccccccCCcccccchhhhcc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H~  271 (317)
                      |+|..|.++|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            677777777777777777777774

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.96  E-value=6.6e-07  Score=42.28  Aligned_cols=24  Identities=46%  Similarity=0.789  Sum_probs=22.9

Q ss_pred             CCCCcccCcCCCcccccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      |+|..|.++|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            799999999999999999999984

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=9.5e-07  Score=44.38  Aligned_cols=26  Identities=23%  Similarity=0.491  Sum_probs=18.8

Q ss_pred             ccccCCc--cccccCCcccccchhhhcc
Q 021090          246 KIFECPF--CYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~~~H~  271 (317)
                      |||.|.+  |+|+++..+.|.+|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5777777  7777777777777777554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1.5e-06  Score=42.89  Aligned_cols=26  Identities=23%  Similarity=0.261  Sum_probs=20.0

Q ss_pred             ccCCccccccCCcccccchhhhccCc
Q 021090          248 FECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |.|+.||......+.|++|.|+|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67777777777777777777777765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.86  E-value=3.9e-07  Score=44.84  Aligned_cols=25  Identities=32%  Similarity=0.502  Sum_probs=23.2

Q ss_pred             CCCCCCc--ccCcCCCccccccccccc
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAH   26 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H   26 (317)
                      .||+|+.  |+|+|+.++.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899985  999999999999999987

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=1.5e-06  Score=47.29  Aligned_cols=27  Identities=30%  Similarity=0.452  Sum_probs=24.1

Q ss_pred             cCCccccCCccccccCCcccccchhhh
Q 021090          243 ADEKIFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       243 ~~ekpf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      +|-|||.|.+|+|.|.+...+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            478999999999999999999999753

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.83  E-value=6e-07  Score=44.22  Aligned_cols=28  Identities=25%  Similarity=0.533  Sum_probs=26.2

Q ss_pred             CCCCCCcccCcCCCccccccccccccCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      +-|.|.+|...|.++-.|+.||-+|+||
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4689999999999999999999999986

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=1.6e-06  Score=43.94  Aligned_cols=28  Identities=25%  Similarity=0.557  Sum_probs=25.5

Q ss_pred             CCCCCCc--ccCcCCCcccccccc-ccccCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHM-KAHLAA   29 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~-r~H~~e   29 (317)
                      |||.|.+  |.|.|++.+.-..|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            7999998  999999999999997 899754

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=3e-06  Score=42.91  Aligned_cols=27  Identities=30%  Similarity=0.593  Sum_probs=20.2

Q ss_pred             ccccCCc--cccccCCcccccchh-hhccC
Q 021090          246 KIFECPF--CYKVFGSGQALGGHK-RSHLL  272 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~-~~H~~  272 (317)
                      |||.|++  |.|+|...+.-.+|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5777777  778887777777776 77764

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.76  E-value=2.5e-06  Score=43.18  Aligned_cols=27  Identities=22%  Similarity=0.438  Sum_probs=21.9

Q ss_pred             cccCCccccccCCcccccchh-hhccCc
Q 021090          247 IFECPFCYKVFGSGQALGGHK-RSHLLA  273 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~-~~H~~~  273 (317)
                      ||.|.+|++.|++...|.+|+ +.|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            788999999999999999995 467654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.72  E-value=1.3e-06  Score=43.14  Aligned_cols=28  Identities=25%  Similarity=0.493  Sum_probs=26.2

Q ss_pred             CCCCCCc--ccCcCCCccccccccccccCC
Q 021090            2 EKHKCKL--CTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         2 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      |||+|.+  |.|.|.+...|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6899986  999999999999999999986

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=5.6e-06  Score=40.98  Aligned_cols=28  Identities=21%  Similarity=0.472  Sum_probs=24.9

Q ss_pred             CCCCCCcccCcCCCcccccccccc-ccCC
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKA-HLAA   29 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~-H~~e   29 (317)
                      |||.|.+|..+-...++|+.|+++ |..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            799999999999999999999995 5444

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=4.4e-06  Score=41.16  Aligned_cols=23  Identities=26%  Similarity=0.605  Sum_probs=21.0

Q ss_pred             cccCCccccccCCcccccchhhh
Q 021090          247 IFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      ||.|..|+.+|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.61  E-value=4.6e-06  Score=40.95  Aligned_cols=25  Identities=36%  Similarity=0.707  Sum_probs=18.1

Q ss_pred             ccccCCc--cccccCCcccccchhhhc
Q 021090          246 KIFECPF--CYKVFGSGQALGGHKRSH  270 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~~~H  270 (317)
                      .||+|+.  |+|+|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677765  777777777777777766

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=3.1e-06  Score=46.07  Aligned_cols=25  Identities=16%  Similarity=0.561  Sum_probs=22.9

Q ss_pred             CCCCCCCcccCcCCCcccccccccc
Q 021090            1 MEKHKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         1 ~k~~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      +|||.|.+|||.|-++.++.+|.-.
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhhh
Confidence            6999999999999999999999753

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=3.8e-06  Score=41.37  Aligned_cols=24  Identities=33%  Similarity=0.592  Sum_probs=22.3

Q ss_pred             CCCCCcccCcCCCccccccccccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAH   26 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H   26 (317)
                      ||.|..|.-.|..+++|..||++-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999853

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.35  E-value=8.3e-06  Score=41.25  Aligned_cols=26  Identities=31%  Similarity=0.565  Sum_probs=23.5

Q ss_pred             CCCCCcccCcCCCccccccccc-cccC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK-AHLA   28 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r-~H~~   28 (317)
                      ||.|.+|++.|+++.-|-+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999966 7765

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=2e-05  Score=38.71  Aligned_cols=29  Identities=31%  Similarity=0.525  Sum_probs=19.5

Q ss_pred             CccccCCccccccCCcccccchhhhccCc
Q 021090          245 EKIFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       245 ekpf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      +.-|.|.+|...|.+...|..||-+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34566777777777777777777777664

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.29  E-value=2.2e-05  Score=38.70  Aligned_cols=28  Identities=36%  Similarity=0.412  Sum_probs=16.3

Q ss_pred             ccccCCc--cccccCCcccccchhhhccCc
Q 021090          246 KIFECPF--CYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~~--C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |||.|..  |.|.|.+-..|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            3555554  666666666666666666553

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=8.9e-05  Score=36.57  Aligned_cols=24  Identities=21%  Similarity=0.524  Sum_probs=19.1

Q ss_pred             ccccCCccccccCCcccccchhhh
Q 021090          246 KIFECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      |||.|..|...-.-.++|+.|.++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            578888888888888888888775

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=3.1e-05  Score=36.41  Aligned_cols=23  Identities=30%  Similarity=0.606  Sum_probs=21.2

Q ss_pred             CCCCCCcccCcCCCccccccccc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMK   24 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r   24 (317)
                      .||+|.-|...|-.+..|+.||-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999974

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=3.3e-05  Score=38.10  Aligned_cols=24  Identities=29%  Similarity=0.534  Sum_probs=22.6

Q ss_pred             CCCCCCcccCcCCCcccccccccc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      |||+|++|.-...++++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            799999999999999999999984

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.88  E-value=8e-05  Score=35.90  Aligned_cols=22  Identities=18%  Similarity=0.403  Sum_probs=20.1

Q ss_pred             CCCCCcccCcCCCccccccccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK   24 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r   24 (317)
                      ||+|..|||.+-++.+|..|.-
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999853

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.80  E-value=0.00013  Score=35.19  Aligned_cols=22  Identities=36%  Similarity=0.605  Sum_probs=19.5

Q ss_pred             cccCCccccccCCcccccchhh
Q 021090          247 IFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      ||+|..|||.+-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999988853

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00014  Score=35.82  Aligned_cols=23  Identities=22%  Similarity=0.482  Sum_probs=15.6

Q ss_pred             ccccCCccccccCCcccccchhh
Q 021090          246 KIFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      |||+|.+|..-..+.++|..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHH
Confidence            46777777766677777777654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00018  Score=34.86  Aligned_cols=26  Identities=31%  Similarity=0.308  Sum_probs=22.5

Q ss_pred             cccCCccccccCCcccccchhhhccC
Q 021090          247 IFECPFCYKVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~~H~~  272 (317)
                      |-+|+.|.++..++..|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            66899999999999999999998853

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=9.7e-05  Score=35.72  Aligned_cols=24  Identities=29%  Similarity=0.672  Sum_probs=22.2

Q ss_pred             CCCCCcccCcCCCccccccccc-cc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK-AH   26 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r-~H   26 (317)
                      +|.|+.|+-...+++.|..|+| .|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            6999999999999999999998 45

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00015  Score=37.95  Aligned_cols=23  Identities=26%  Similarity=0.248  Sum_probs=19.4

Q ss_pred             CcccCcCCCccccccccccccCC
Q 021090            7 KLCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         7 ~~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      +-=++-|..+..|..|||+||||
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCcchhHHHHHHHHhhcCCC
Confidence            33456699999999999999986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.44  E-value=9.3e-05  Score=34.90  Aligned_cols=22  Identities=23%  Similarity=0.631  Sum_probs=20.6

Q ss_pred             CCCCcccCcCCCcccccccccc
Q 021090            4 HKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         4 ~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      |+|+.|-|.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            8999999999999999999884

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.37  E-value=0.00029  Score=33.02  Aligned_cols=21  Identities=24%  Similarity=0.543  Sum_probs=16.7

Q ss_pred             cccCCccccccCCcccccchh
Q 021090          247 IFECPFCYKVFGSGQALGGHK  267 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~  267 (317)
                      ||+|.-|...|.++..|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            788888888888888887776

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.00036  Score=37.29  Aligned_cols=28  Identities=36%  Similarity=0.548  Sum_probs=22.7

Q ss_pred             CCccccCC--ccccccCCcccccchhhhcc
Q 021090          244 DEKIFECP--FCYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       244 ~ekpf~C~--~C~k~F~~~~~L~~H~~~H~  271 (317)
                      .+|||.|.  =|+.+|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            57888884  48888888888888887774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.00024  Score=34.39  Aligned_cols=26  Identities=35%  Similarity=0.484  Sum_probs=23.8

Q ss_pred             CCCCCcccCcCCCccccccccccccC
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHLA   28 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~~   28 (317)
                      |-+|+.|..+.+++..|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            66899999999999999999999953

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.00031  Score=39.50  Aligned_cols=25  Identities=28%  Similarity=0.531  Sum_probs=23.0

Q ss_pred             CCCCCcccCcCCCcccccccccccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKAHL   27 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~H~   27 (317)
                      -|+|..|||.|.....|+.|.-.|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3899999999999999999998885

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.00054  Score=38.49  Aligned_cols=26  Identities=27%  Similarity=0.475  Sum_probs=22.9

Q ss_pred             CcceechhhhhhccCccchhhhhhhh
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H  231 (317)
                      ...|.|.+|||.|+....|+.|...|
T Consensus         4 ~~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           4 AGILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             cceeeccccccccCCHHHHhHhHHhc
Confidence            45689999999999999999999877

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.66  E-value=0.00042  Score=34.61  Aligned_cols=29  Identities=21%  Similarity=0.516  Sum_probs=27.0

Q ss_pred             CCCCCCC--cccCcCCCccccccccccccCC
Q 021090            1 MEKHKCK--LCTRSFSNGRALGGHMKAHLAA   29 (317)
Q Consensus         1 ~k~~~C~--~Cgk~F~~~~~L~~H~r~H~~e   29 (317)
                      ||+|.|+  .|+-.|...+.|+.|+=.|+||
T Consensus         1 ~k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           1 MKRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CCceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            7999998  5999999999999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0011  Score=34.14  Aligned_cols=25  Identities=28%  Similarity=0.748  Sum_probs=20.1

Q ss_pred             ceechhhhhhccCccchhhhhhhhh
Q 021090          208 KYRCEKCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       208 ~~~C~~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .|.|+.|||+|+.+..+.+|-...+
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            4788888888888888888876655

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.39  E-value=0.0014  Score=30.74  Aligned_cols=22  Identities=32%  Similarity=0.927  Sum_probs=17.1

Q ss_pred             ccCCccccccCCcccccchhhh
Q 021090          248 FECPFCYKVFGSGQALGGHKRS  269 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~~  269 (317)
                      |.|++|-|.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888777653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0017  Score=34.59  Aligned_cols=28  Identities=25%  Similarity=0.462  Sum_probs=24.9

Q ss_pred             cCcceech--hhhhhccCccchhhhhhhhh
Q 021090          205 TRGKYRCE--KCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       205 ~~~~~~C~--~C~k~f~~~~~L~~H~~~H~  232 (317)
                      .++||.|.  -|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            57999995  49999999999999998885

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.11  E-value=0.0019  Score=32.86  Aligned_cols=22  Identities=27%  Similarity=0.525  Sum_probs=20.5

Q ss_pred             CCCCCcccCcCCCccccccccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK   24 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r   24 (317)
                      +|.|+-||-+|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4899999999999999999986

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.0036  Score=32.55  Aligned_cols=18  Identities=28%  Similarity=0.211  Sum_probs=8.9

Q ss_pred             cccCCcccccchhhhccC
Q 021090          255 KVFGSGQALGGHKRSHLL  272 (317)
Q Consensus       255 k~F~~~~~L~~H~~~H~~  272 (317)
                      +.|..+..|..|||+|+|
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            344455555555555544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.0049  Score=31.59  Aligned_cols=27  Identities=22%  Similarity=0.390  Sum_probs=22.5

Q ss_pred             cccCCccccccCCcccccchhhhccCc
Q 021090          247 IFECPFCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       247 pf~C~~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      .|.|..|||+|++...+.+|--.-+|.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            599999999999999998887655553

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.00  E-value=0.0039  Score=29.74  Aligned_cols=24  Identities=38%  Similarity=0.657  Sum_probs=14.9

Q ss_pred             ccCCc--cccccCCcccccchhhhcc
Q 021090          248 FECPF--CYKVFGSGQALGGHKRSHL  271 (317)
Q Consensus       248 f~C~~--C~k~F~~~~~L~~H~~~H~  271 (317)
                      |.|.+  |+|+|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            44443  6777777666766666654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.51  E-value=0.0068  Score=30.10  Aligned_cols=28  Identities=21%  Similarity=0.338  Sum_probs=18.1

Q ss_pred             ccccCC--ccccccCCcccccchhhhccCc
Q 021090          246 KIFECP--FCYKVFGSGQALGGHKRSHLLA  273 (317)
Q Consensus       246 kpf~C~--~C~k~F~~~~~L~~H~~~H~~~  273 (317)
                      |.|.|.  .|+..|.....|+.|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            345665  3777777777777777666664

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.31  E-value=0.0068  Score=28.87  Aligned_cols=24  Identities=33%  Similarity=0.618  Sum_probs=20.6

Q ss_pred             eech--hhhhhccCccchhhhhhhhh
Q 021090          209 YRCE--KCKKAFRSYHALGGHKKVCE  232 (317)
Q Consensus       209 ~~C~--~C~k~f~~~~~L~~H~~~H~  232 (317)
                      |.|.  -|+|.|+.-..|+.|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5674  49999999999999998886

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.0092  Score=28.61  Aligned_cols=21  Identities=43%  Similarity=0.866  Sum_probs=17.4

Q ss_pred             ccCCccccccCCcccccchhh
Q 021090          248 FECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       248 f~C~~C~k~F~~~~~L~~H~~  268 (317)
                      |+|+.|+--..+++.|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            778888888888888888876

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.21  E-value=0.017  Score=29.19  Aligned_cols=23  Identities=30%  Similarity=0.472  Sum_probs=18.1

Q ss_pred             ccccCCccccccCCcccccchhh
Q 021090          246 KIFECPFCYKVFGSGQALGGHKR  268 (317)
Q Consensus       246 kpf~C~~C~k~F~~~~~L~~H~~  268 (317)
                      -.|.|.-||-.|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35888888888888888888875

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.03  E-value=0.034  Score=29.86  Aligned_cols=27  Identities=33%  Similarity=0.603  Sum_probs=20.8

Q ss_pred             CcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccc
Q 021090          206 RGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKV  256 (317)
Q Consensus       206 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~  256 (317)
                      +..|.|.+||..                        +.|+-|-.|++||..
T Consensus         3 ~~~~~C~vCG~i------------------------~~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICGYT------------------------AVDEAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTCCE------------------------EESCCCSBCTTTCCB
T ss_pred             CcEEECCCCCCE------------------------ecCCCCCcCCCCCCc
Confidence            456899999854                        337789999999853

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.82  E-value=0.0087  Score=37.07  Aligned_cols=23  Identities=30%  Similarity=0.728  Sum_probs=21.3

Q ss_pred             CCCCCcccCcCCCcccccccccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      -|-|..|+|.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            37899999999999999999995

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.15  E-value=0.026  Score=28.95  Aligned_cols=24  Identities=21%  Similarity=0.528  Sum_probs=16.0

Q ss_pred             CCccccCCccccccCCcccccchh
Q 021090          244 DEKIFECPFCYKVFGSGQALGGHK  267 (317)
Q Consensus       244 ~ekpf~C~~C~k~F~~~~~L~~H~  267 (317)
                      |+-.|.|.+|.+.++.-+++-+|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHH
Confidence            444577777777777777776664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.017  Score=35.75  Aligned_cols=26  Identities=27%  Similarity=0.432  Sum_probs=22.8

Q ss_pred             cCcceechhhhhhccCccchhhhhhh
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKV  230 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~  230 (317)
                      +...|-|..|+|.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            55779999999999999999999864

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.93  E-value=0.048  Score=29.03  Aligned_cols=27  Identities=22%  Similarity=0.593  Sum_probs=20.8

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCcccc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYK  255 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k  255 (317)
                      .++-|.|.+||..                        |.|+-|-+|++||.
T Consensus         2 ~~~~~vC~vCGyi------------------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           2 DDKFHLCPICGYI------------------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             SCCEEECSSSCCE------------------------EESSCCSBCTTTCC
T ss_pred             CCCEEECCCCCCE------------------------eeCCCCCcCCCCCC
Confidence            3567899999843                        44778899999985

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.04  E-value=0.047  Score=30.26  Aligned_cols=29  Identities=31%  Similarity=0.663  Sum_probs=22.8

Q ss_pred             CCccccCCccccccCCcccccchhh-hccC
Q 021090          244 DEKIFECPFCYKVFGSGQALGGHKR-SHLL  272 (317)
Q Consensus       244 ~ekpf~C~~C~k~F~~~~~L~~H~~-~H~~  272 (317)
                      .+.|-.|++|+....+..+|.+|+. .|..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            4678888888888888888888875 4543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.44  E-value=0.053  Score=26.07  Aligned_cols=18  Identities=33%  Similarity=0.575  Sum_probs=9.9

Q ss_pred             hhhhccCccchhhhhhhh
Q 021090          214 CKKAFRSYHALGGHKKVC  231 (317)
Q Consensus       214 C~k~f~~~~~L~~H~~~H  231 (317)
                      |+|.|+..+.+..|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            555555555555555444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.43  E-value=0.047  Score=26.50  Aligned_cols=22  Identities=14%  Similarity=0.368  Sum_probs=19.8

Q ss_pred             CCCCCcccCcCCCccccccccc
Q 021090            3 KHKCKLCTRSFSNGRALGGHMK   24 (317)
Q Consensus         3 ~~~C~~Cgk~F~~~~~L~~H~r   24 (317)
                      -|.|..|||...+...++-|+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEe
Confidence            4899999999999999999865

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.74  E-value=0.05  Score=26.29  Aligned_cols=17  Identities=47%  Similarity=0.608  Sum_probs=15.9

Q ss_pred             cccCcCCCccccccccc
Q 021090            8 LCTRSFSNGRALGGHMK   24 (317)
Q Consensus         8 ~Cgk~F~~~~~L~~H~r   24 (317)
                      -|||.|+++..|+-|.+
T Consensus         7 gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTCCEESSHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHH
Confidence            59999999999999987

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.41  E-value=0.094  Score=26.79  Aligned_cols=26  Identities=19%  Similarity=0.521  Sum_probs=23.1

Q ss_pred             cCcceechhhhhhccCccchhhhhhh
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKV  230 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~  230 (317)
                      ++..|.|.+|.+.++..+++-+|..+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            56789999999999999999999754

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.48  E-value=0.079  Score=29.32  Aligned_cols=24  Identities=21%  Similarity=0.545  Sum_probs=21.0

Q ss_pred             CCCCCCcccCcCCCcccccccccc
Q 021090            2 EKHKCKLCTRSFSNGRALGGHMKA   25 (317)
Q Consensus         2 k~~~C~~Cgk~F~~~~~L~~H~r~   25 (317)
                      +|-.|++|+-......+|.+|+-.
T Consensus        23 qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHH
Confidence            466799999999999999999874

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.56  E-value=0.13  Score=30.98  Aligned_cols=38  Identities=24%  Similarity=0.524  Sum_probs=26.6

Q ss_pred             cCcceechhhhhhccCccchhhhhhhhhcccccccccccCCccccCCccccc
Q 021090          205 TRGKYRCEKCKKAFRSYHALGGHKKVCETNINAGTKVAADEKIFECPFCYKV  256 (317)
Q Consensus       205 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~H~~~h~~ekpf~C~~C~k~  256 (317)
                      ...-|.|+.|+++|..-..+.. +. .            ..-.|.|.+|+--
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L-~d-~------------~~~~F~C~~C~~e   48 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL-FD-P------------MTGTFRCTFCHTE   48 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH-EE-T------------TTTEEBCSSSCCB
T ss_pred             cCCceECCCCCCCcchhhHHHh-cC-c------------CCCeEEecCCCCE
Confidence            4567999999999987665543 11 1            2446999999754