Citrus Sinensis ID: 021135

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
Protein Sequence
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQAsrkaidpvapVYKYCLVSMSNILTTTCQYEAlkyvsfpvqtlakCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIfilfpsgadlspyskgrentVWGVSLMVGYlgfdgftstfqdklfkgydmeiHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCvwfrhplsweqCIGSIIVFGALYTRSFFKkvsekprpsehpmenmhngasslmkgssprggep
Flexible Loop (DISEMBL)
MAETLITAigvkdsrvLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSekprpsehpmenmhngasslmkgssprggep
Low Complexity Region (SEG)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Disordered region (IsUnstruct)
****LITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK**********************************
Disordered Region (DISOPRED)
*AET***AIGVKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL****************TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR**************************************
Disordered Region (DISEMBL)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK*************NMHNGAS*************
Disordered Region (DISPRO)
*********GVKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS**********RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV********************************
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	317	2.2.26 [Sep-21-2011]
Q6NMB6	344	UDP-galactose/UDP-glucose	yes	no	0.930	0.857	0.684	1e-132
Q6NM25	347	UDP-galactose/UDP-glucose	no	no	0.867	0.792	0.696	1e-128
Q55DM5	359	Adenosine 3'-phospho 5'-p	yes	no	0.835	0.738	0.427	1e-60
Q91ZN5	431	Adenosine 3'-phospho 5'-p	no	no	0.839	0.617	0.386	9e-43
Q8TB61	432	Adenosine 3'-phospho 5'-p	yes	no	0.782	0.574	0.392	1e-41
Q5R9A1	432	Adenosine 3'-phospho 5'-p	yes	no	0.782	0.574	0.392	2e-41
Q9VEI3	465	Adenosine 3'-phospho 5'-p	yes	no	0.861	0.587	0.362	1e-37
Q8MXJ9	425	Adenosine 3'-phospho 5'-p	yes	no	0.757	0.564	0.382	5e-34
Q6C4X5	365	UDP-galactose transporter	yes	no	0.851	0.739	0.287	2e-24
Q5B5W2	424	UDP-galactose transporter	yes	no	0.744	0.556	0.293	4e-22

>sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B OS=Arabidopsis thaliana GN=At5g59740 PE=2 SV=1

 Score =  469 bits (1208), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/336 (68%), Positives = 264/336 (78%), Gaps = 41/336 (12%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQ----------------------- 37
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQ                       
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 38  ---------------ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 82
                          AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 83  CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 142
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 143 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 202
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 203 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 262
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 263 WEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 295
           WEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELP 336

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6NM25|UTR5_ARATH UDP-galactose/UDP-glucose transporter 5 OS=Arabidopsis thaliana GN=UTR5 PE=2 SV=1

 Score =  457 bits (1177), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/313 (69%), Positives = 250/313 (79%), Gaps = 38/313 (12%)

Query: 20  IFAVSGIMTTLVIYGILQAS--------------------------------------RK 41
           +FA+SGIM TLVIYG+LQ                                        +K
Sbjct: 21  VFAISGIMLTLVIYGLLQEKIMRVPYGLKKEYFKHSLFLVFCNRLTTSAVSAAALLASKK 80

Query: 42  AIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRY 101
            +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+Y
Sbjct: 81  VLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKY 140

Query: 102 KGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDK 161
           +G+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDK
Sbjct: 141 RGFDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDK 200

Query: 162 LFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 221
           LFKGY+MEIHNQIFYTT+CS +LS +GLIL+GHL  A+DFV  H DC FD+ALLSTVAT 
Sbjct: 201 LFKGYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATA 260

Query: 222 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 281
           SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++F
Sbjct: 261 SQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTF 320

Query: 282 FKKVSEKPRPSEH 294
            KK SEKP  ++ 
Sbjct: 321 VKKKSEKPPAAQE 333

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q55DM5|S35B2_DICDI Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Dictyostelium discoideum GN=slc35b2 PE=3 SV=1

 Score =  233 bits (595), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 180/311 (57%), Gaps = 46/311 (14%)

Query: 11  VKDSRVLKMIFAVSGIMTTLVIYGILQ--------------------------ASR---- 40
           V+ S  +K+  A  GIM + ++YGILQ                          ++R    
Sbjct: 21  VQLSYNMKLALATGGIMGSFLLYGILQERLMVVPYKNADGSEEYFTDSTFLVLSNRVFAA 80

Query: 41  -----------KAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV 89
                      +++  VAP++KY  V++SN   T CQYEALKYV+FP QTL KC KM+PV
Sbjct: 81  LMAIVIVLKRGESLKNVAPLHKYVGVALSNFCATWCQYEALKYVNFPTQTLGKCGKMLPV 140

Query: 90  MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYL 149
           M+ GT I  K+Y   DY +AL +T GC IF L    ++         NT +G+ LM  Y+
Sbjct: 141 MLVGTFISGKKYGLKDYSIALTITTGCMIFFLTGKISN-----NESSNTSYGIILMALYM 195

Query: 150 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 209
            FD FTSTFQ+K+FKGY M  ++Q+ Y   CS ++S+  LIL G LF AI+F+  H   F
Sbjct: 196 FFDSFTSTFQEKMFKGYTMSTYDQMIYVNGCSSIISVFILILNGRLFPAIEFISTHNGVF 255

Query: 210 FDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGS 269
           FD  +LS  A   Q  I YTI+ FGAL F+TIM TRQ+VSI+LS + + HPLS  Q IG+
Sbjct: 256 FDSTMLSASAGLGQMVIYYTIKEFGALVFSTIMVTRQMVSIILSTLIYLHPLSNTQWIGA 315

Query: 270 IIVFGALYTRS 280
           ++VFG LY +S
Sbjct: 316 LLVFGTLYYKS 326

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q91ZN5|S35B2_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Mus musculus GN=Slc35b2 PE=2 SV=1

 Score =  174 bits (440), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 160/274 (58%), Gaps = 8/274 (2%)

Query: 29  TLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIP 88
            LV+ G+    RK     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IP
Sbjct: 163 ALVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIP 222

Query: 89  VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGY 148
           VM+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY
Sbjct: 223 VMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSS-PATTLSGLVLLAGY 278

Query: 149 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC 208
           + FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H + 
Sbjct: 279 IAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRHSEF 337

Query: 209 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIG 268
                LLS  +   Q FI YTI  FGA  F  IMT RQ ++I+LSC+ + H ++    +G
Sbjct: 338 ALHALLLSICSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTVVGGLG 397

Query: 269 SIIVFGALYTRSFF---KKVSEKPRPSEHPMENM 299
             +VF AL  R +    K+  +K  P+E P++ +
Sbjct: 398 VAVVFTALLLRVYARGRKQRGKKAVPTEPPVQKV 431

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Mus musculus (taxid: 10090)

>sp|Q8TB61|S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Homo sapiens GN=SLC35B2 PE=1 SV=1

 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/257 (39%), Positives = 150/257 (58%), Gaps = 9/257 (3%)

Query: 47  APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDY 106
           AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y
Sbjct: 181 APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEY 240

Query: 107 FLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY 166
             A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y
Sbjct: 241 LTATLISIGVSMFLL-SSGPE--PRSS-PATTLSGLILLAGYIAFDSFTSNWQDALF-AY 295

Query: 167 DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFI 226
            M     +F     SC+ ++  L+ +G L     F+  H +      LLS  +   Q FI
Sbjct: 296 KMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFI 355

Query: 227 SYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFF 282
            YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  +VF AL    Y R   
Sbjct: 356 FYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRL 415

Query: 283 KKVSEKPRPSEHPMENM 299
           K+  +K  P E P++ +
Sbjct: 416 KQRGKKAVPVESPVQKV 432

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.

Homo sapiens (taxid: 9606)

>sp|Q5R9A1|S35B2_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Pongo abelii GN=SLC35B2 PE=2 SV=2

 Score =  169 bits (429), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/257 (39%), Positives = 150/257 (58%), Gaps = 9/257 (3%)

Query: 47  APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDY 106
           AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y
Sbjct: 181 APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKVSKVIPVMLMGKLVSRRSYEHWEY 240

Query: 107 FLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY 166
             A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD FTS +QD LF  Y
Sbjct: 241 LTATLISIGVSMFLL-SSGPE--PRSS-PATTLSGLILLAGYIAFDSFTSNWQDALF-AY 295

Query: 167 DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFI 226
            M     +F     SC+ ++  L+ +G L     F+  H +      LLS  +   Q FI
Sbjct: 296 KMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFI 355

Query: 227 SYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFF 282
            YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  +VF AL    Y R   
Sbjct: 356 FYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRL 415

Query: 283 KKVSEKPRPSEHPMENM 299
           K+  +K  P E P++ +
Sbjct: 416 KQRGKKAVPVESPVQKV 432

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Pongo abelii (taxid: 9601)

>sp|Q9VEI3|S35B2_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Drosophila melanogaster GN=sll PE=1 SV=1

 Score =  157 bits (396), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 159/287 (55%), Gaps = 14/287 (4%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALK 71
           KDS+ L  +F+ + ++  LV    LQ     +   AP+YKY   S SNI++   QYEALK
Sbjct: 182 KDSQFL--VFS-NRLLAFLVALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALK 238

Query: 72  YVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 131
           +V+FP Q LAK  K+IPVM+ G ++ + +Y+ Y+Y  ALL++LG    I F SG+  S  
Sbjct: 239 FVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEYVTALLISLG---MIFFMSGSSDSSK 295

Query: 132 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL 191
           + G   T+ G+ L+  Y+ FD FT+ +Q  LFK Y M     +    L S + + + L +
Sbjct: 296 ASG-VTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSM 354

Query: 192 EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIV 251
           +G    ++ F   H    FD+ +LS  +   Q FI +TI  FG + F  IMT RQ V+I+
Sbjct: 355 QGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVVFTIIMTLRQAVAIM 414

Query: 252 LSCVWFRHPLSWEQCIGSIIVFGALYTRSF-------FKKVSEKPRP 291
           LSC  ++H +S     G +IVF A++ R +        +K +E  +P
Sbjct: 415 LSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLRAIRKRAEANKP 461

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Required for the dorsoventral patterning, suggesting that it mediates the transport of the sulfate donor required for the sulfotransferase activity of pip (pipe).

Drosophila melanogaster (taxid: 7227)

>sp|Q8MXJ9|S35B2_CAEEL Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Caenorhabditis elegans GN=pst-1 PE=3 SV=4

 Score =  145 bits (365), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/256 (38%), Positives = 137/256 (53%), Gaps = 16/256 (6%)

Query: 46  VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYD 105
           V P+Y +   S SN +++ CQYEALKYVSFP QT+ K +K++  M+ G L+  +RY  ++
Sbjct: 177 VPPLYVHSYTSFSNTISSWCQYEALKYVSFPTQTICKASKVVVTMLMGRLVRGQRYSWFE 236

Query: 106 YFLALLVTLGCSIFILFPSGADLSPYS-KGRENTVW-----GVSLMVGYLGFDGFTSTFQ 159
           Y        GC   I F +   L   S KG  +T+      G+ LM GYL FD FT  +Q
Sbjct: 237 Y--------GCGCTIAFGASLFLLSSSSKGAGSTITYTSFSGMILMAGYLLFDAFTLNWQ 288

Query: 160 DKLFKGY-DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV 218
             LF     +  +  +F     S +L    LI +G L+ +I F   H+D   DV LLS  
Sbjct: 289 KALFDTKPKVSKYQMMFGVNFFSAILCAVSLIEQGTLWSSIKFGAEHVDFSRDVFLLSLS 348

Query: 219 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 278
               Q FI  TI  FG + FA IMT RQ++SIVLS + + H L++   IG +IVF A++ 
Sbjct: 349 GAIGQIFIYSTIERFGPIVFAVIMTIRQMLSIVLSTIMYGHELTFLAAIGFMIVFAAIFV 408

Query: 279 RSFFKKVSEKPRPSEH 294
               KK S+K R  + 
Sbjct: 409 -DIHKKYSDKSRGPQR 423

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6C4X5|HUT1_YARLI UDP-galactose transporter homolog 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HUT1 PE=3 SV=1

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 19/289 (6%)

Query: 13  DSRVLK---MIFAVSGIMTTLVIYGILQ--ASRKA----------IDPVAPVYKYCLVSM 57
           D+++ +   +I  V   +   V Y  LQ   SR+A           D +  + +  LV++
Sbjct: 74  DNKIFRASLVINTVQSFLAAAVGYAYLQYKQSRRAAKGLKKNTTVFDSMYTLKQLSLVAL 133

Query: 58  SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCS 117
           S  L +   Y ALKYV +    LAK  K+IP+M     + ++++  Y Y + +LVT+G S
Sbjct: 134 SQSLASPLSYTALKYVDYLTSILAKSCKLIPLMALQVTLYRRKFPAYKYAVVVLVTIGVS 193

Query: 118 IFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF-KGYDMEIHNQIFY 176
           +F +F + A       G E+ ++G+ L+   +  DG T++ QD++F K  D+   + +  
Sbjct: 194 MFTIFHA-APKKASGAGSEHQLYGLGLLGISMLLDGLTNSTQDQIFRKNADITGPHVMCG 252

Query: 177 TTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFG 234
             L + V +   L+      L  AI F+  H +   D+ L        Q FI  T+  FG
Sbjct: 253 LNLLTGVFTTVSLLTFSRPQLDTAIAFIRLHPEIMRDIVLFGLCGAVGQVFIFQTLEKFG 312

Query: 235 ALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 283
           ++   T+  TR++ S++LS VWF H L+  Q  G   VFG +   ++ K
Sbjct: 313 SVVLVTVNVTRKMFSMLLSVVWFNHRLTLGQWAGVAAVFGGIGFEAWMK 361

May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q5B5W2|HUT1_EMENI UDP-galactose transporter homolog 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hut1 PE=3 SV=1

 Score =  105 bits (262), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 30/266 (11%)

Query: 49  VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFL 108
           ++   LVS+S+ L +   Y +L ++ +    LAK  K++PVM     I +KRY  Y Y +
Sbjct: 145 IFPLVLVSISSSLASPFGYASLAHIDYLTFILAKSCKLLPVMFLHLTIFRKRYPLYKYGV 204

Query: 109 ALLVTLGCSIFILFPSGAD---LSPYSKGRE-NTVWGVSLMVGYLGFDGFTSTFQDKLFK 164
            LLVTLG + F L   G      +  +KG   ++ WG+ L+   L  DG T+T QD +F 
Sbjct: 205 VLLVTLGVATFTLHHPGTSNKVAASATKGTSGSSAWGIFLLSINLLLDGLTNTTQDHVFS 264

Query: 165 ---------GYDMEIHNQIFYTTLCSCVL------SLSGLI-----------LEGHLFLA 198
                    G  M +   +  T L S  L      S +G++            E  L  A
Sbjct: 265 SPQLYTRFSGPQMMVAQNVLSTLLTSAYLLIMPHLSSTGILHAILPVPIPPSTETELTAA 324

Query: 199 IDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFR 258
           + F+  H +    V   +      Q FI YT+  F +L   T+  TR++++++LS  WF 
Sbjct: 325 VSFLSRHPEVLKSVLGFAAFGAMGQLFIFYTLSQFSSLLLVTVTVTRKMLTMLLSVFWFG 384

Query: 259 HPLSWEQCIGSIIVFGALYTRSFFKK 284
           H LS  Q +G  +VFG +   +  ++
Sbjct: 385 HSLSAGQWLGIGLVFGGIGAEAVVQR 410

May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
255580568	349	Adenosine 3'-phospho 5'-phosphosulfate t	0.943	0.856	0.697	1e-135
224054863	347	predicted protein [Populus trichocarpa]	0.946	0.864	0.696	1e-134
225435088	344	PREDICTED: adenosine 3'-phospho 5'-phosp	0.892	0.822	0.713	1e-130
297796921	344	hypothetical protein ARALYDRAFT_332244 [	0.952	0.877	0.673	1e-130
51969060	344	unnamed protein product [Arabidopsis tha	0.930	0.857	0.684	1e-130
15238511	344	UDP-N-acetylglucosamine (UAA) transporte	0.930	0.857	0.684	1e-130
449460973	361	PREDICTED: UDP-galactose/UDP-glucose tra	0.905	0.795	0.683	1e-128
297819150	347	UDP-galactose transporter 5 [Arabidopsis	0.867	0.792	0.699	1e-127
356557455	351	PREDICTED: adenosine 3'-phospho 5'-phosp	0.886	0.800	0.699	1e-127
356547228	352	PREDICTED: adenosine 3'-phospho 5'-phosp	0.924	0.832	0.682	1e-127

>gi|255580568|ref|XP_002531108.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223529304|gb|EEF31273.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/340 (69%), Positives = 274/340 (80%), Gaps = 41/340 (12%)

Query: 7   TAIGVKDSRVLKMIFAVSGIMTTLVIYGILQ----------------------------- 37
           +++GVKD+++ K +FAVSGIM+TLVIYG+LQ                             
Sbjct: 10  SSVGVKDNKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKYSLFLVFCNRITT 69

Query: 38  ---------ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIP 88
                    AS+KA++PVAP+YKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAKMIP
Sbjct: 70  SAVSAAVLLASKKALNPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIP 129

Query: 89  VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGY 148
           VMIWGT+IMQKRYKG DY LA LVTLGCS+FILFP+G D+SPYS+GRENTVWGVSLM+GY
Sbjct: 130 VMIWGTVIMQKRYKGMDYLLAFLVTLGCSVFILFPAGTDISPYSRGRENTVWGVSLMLGY 189

Query: 149 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC 208
           LGFDGFTSTFQDKLFKGYDMEIHNQIFYTT+CSC+LS +GL+++GHL  AIDFVY H DC
Sbjct: 190 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTVCSCILSFTGLLIQGHLLPAIDFVYRHNDC 249

Query: 209 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIG 268
           FFD+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQLVSI+LSCVWF HPLSWEQ IG
Sbjct: 250 FFDIALLSTVATGSQFFISYTIRTFGALTFAAIMTTRQLVSIMLSCVWFSHPLSWEQWIG 309

Query: 269 SIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMK 308
           ++IVFG+LY ++F K  S +P PSE   E+  NGAS+  K
Sbjct: 310 AVIVFGSLYAKNFLKGGSPRPPPSE---EHTENGASTPTK 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054863|ref|XP_002298378.1| predicted protein [Populus trichocarpa] gi|222845636|gb|EEE83183.1| predicted protein [Populus trichocarpa]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/343 (69%), Positives = 273/343 (79%), Gaps = 43/343 (12%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQAS--------------------- 39
           MA++L++  GVK++++ K + AV+GIMTTLVIYG+LQ                       
Sbjct: 1   MADSLLSG-GVKENKLWKGVLAVAGIMTTLVIYGLLQEKIMRVPYGSNKEFFKYSLFLVF 59

Query: 40  -----------------RKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 82
                            +KA++PVAPV+KYCL+S+SNILTTTCQYEALKYVSFPVQTLAK
Sbjct: 60  CNRITTSAVSAAALVASKKALNPVAPVHKYCLISVSNILTTTCQYEALKYVSFPVQTLAK 119

Query: 83  CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 142
           CAKMIPVM+WGT+IMQKRYKG DYFLALLVTLGCSIFILFP+G ++SPYS+GRENTVWGV
Sbjct: 120 CAKMIPVMVWGTIIMQKRYKGMDYFLALLVTLGCSIFILFPAGTEISPYSRGRENTVWGV 179

Query: 143 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 202
           SLM+GYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC+LSL+GL+L+GHL  AIDFV
Sbjct: 180 SLMLGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCILSLTGLVLQGHLLPAIDFV 239

Query: 203 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 262
           + H DCFFD+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQLVSIVLSCVWF HPLS
Sbjct: 240 FRHNDCFFDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLVSIVLSCVWFAHPLS 299

Query: 263 WEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASS 305
           WEQ IG++IVFG+LY R+  K    K  PSEH      NGASS
Sbjct: 300 WEQWIGAVIVFGSLYARNLLKSTPSKLPPSEH----TQNGASS 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435088|ref|XP_002281454.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1 [Vitis vinifera] gi|297746141|emb|CBI16197.3| unnamed protein product [Vitis vinifera]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/321 (71%), Positives = 257/321 (80%), Gaps = 38/321 (11%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQ---------------------------------- 37
           K++R  K + AV GIMTTLVIYG+LQ                                  
Sbjct: 11  KENRFWKGVLAVVGIMTTLVIYGVLQEKIMRVPYGADKEYFKYSLFLVFCNRITTSAVSA 70

Query: 38  ----ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 93
               AS+KA+DPVAPVYKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WG
Sbjct: 71  GALLASKKALDPVAPVYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWG 130

Query: 94  TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 153
           TLIMQKRY+G DY LA LVT+GCS FIL+P  +D+SPYSKGRENTVWGVSLM+GYLGFDG
Sbjct: 131 TLIMQKRYRGPDYLLAFLVTVGCSFFILYPVASDISPYSKGRENTVWGVSLMMGYLGFDG 190

Query: 154 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 213
           FTSTFQDKLF+GY+MEIHNQIFYTTLCSC+LSL+GLI +GHL LAIDFV  H DCFFD+ 
Sbjct: 191 FTSTFQDKLFRGYNMEIHNQIFYTTLCSCILSLAGLIFQGHLPLAIDFVRRHNDCFFDIV 250

Query: 214 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 273
           LLSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSW+Q IG+IIVF
Sbjct: 251 LLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWQQWIGAIIVF 310

Query: 274 GALYTRSFFKKVSEKPRPSEH 294
           G+LY +SF K + +KP PSE 
Sbjct: 311 GSLYAKSFLKSMPQKPSPSEE 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796921|ref|XP_002866345.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata] gi|297312180|gb|EFH42604.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/343 (67%), Positives = 262/343 (76%), Gaps = 41/343 (11%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQ----------------------- 37
           MAE      GVK++++ K +FAVSGIM+TLVIYG+LQ                       
Sbjct: 1   MAEPETVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKDYFKHSLFLVF 60

Query: 38  ---------------ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 82
                          AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 83  CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 142
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 143 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 202
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  AIDFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLSAIDFV 240

Query: 203 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 262
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 263 WEQCIGSIIVFGALYTRSFF---KKVSEKPRPSEHPMENMHNG 302
           WEQCIGS+IVFG+LY ++     KK   +P P E P      G
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNNKKKSQTQPPPPELPQYEKAEG 343

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51969060|dbj|BAD43222.1| unnamed protein product [Arabidopsis thaliana] gi|51969064|dbj|BAD43224.1| unnamed protein product [Arabidopsis thaliana]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/336 (68%), Positives = 264/336 (78%), Gaps = 41/336 (12%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQ----------------------- 37
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQ                       
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 38  ---------------ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 82
                          AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 83  CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 142
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 143 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 202
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 203 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 262
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 263 WEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 295
           WEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNSKKNSQTQPPPPELP 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238511|ref|NP_200782.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana] gi|75127032|sp|Q6NMB6.1|UTR5B_ARATH RecName: Full=UDP-galactose/UDP-glucose transporter 5B; Short=AtUTr5B gi|44917565|gb|AAS49107.1| At5g59740 [Arabidopsis thaliana] gi|332009843|gb|AED97226.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/336 (68%), Positives = 264/336 (78%), Gaps = 41/336 (12%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQ----------------------- 37
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQ                       
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 38  ---------------ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 82
                          AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 83  CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 142
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 143 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 202
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 203 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 262
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 263 WEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 295
           WEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELP 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460973|ref|XP_004148218.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus] gi|449527659|ref|XP_004170827.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus]

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/325 (68%), Positives = 262/325 (80%), Gaps = 38/325 (11%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQ---------------------------------- 37
           KD+++ K +FAV+GIMTTLV YG+LQ                                  
Sbjct: 7   KDNKLWKGLFAVAGIMTTLVTYGVLQEKIMRVPYGVNKDYFKHSLFLVFCNRITTSAVSA 66

Query: 38  ----ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 93
               AS+K +DPVAPVYKYCLVS++NILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WG
Sbjct: 67  GVLLASKKTVDPVAPVYKYCLVSITNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWG 126

Query: 94  TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 153
           T+IMQK+YKG+DY LAL+VTLGCSIF+L+P+ A++SPY +GRE+TVWGVSLM+GYLGFDG
Sbjct: 127 TIIMQKKYKGHDYLLALIVTLGCSIFVLYPASAEISPYDRGRESTVWGVSLMIGYLGFDG 186

Query: 154 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 213
           FTSTFQDKLFKGY+M+IHNQIFYTTLCSC+LSL+GLIL+GHL  AI+FVY H DCFFD+A
Sbjct: 187 FTSTFQDKLFKGYNMDIHNQIFYTTLCSCILSLTGLILQGHLLPAIEFVYLHKDCFFDIA 246

Query: 214 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 273
            LSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSWEQ IG+++VF
Sbjct: 247 FLSTVATGSQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWEQWIGAVLVF 306

Query: 274 GALYTRSFFKKVSEKPRPSEHPMEN 298
           G++Y RSF +  ++K   SE P + 
Sbjct: 307 GSIYARSFLRNATQKLPTSETPEDR 331

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819150|ref|XP_002877458.1| UDP-galactose transporter 5 [Arabidopsis lyrata subsp. lyrata] gi|297323296|gb|EFH53717.1| UDP-galactose transporter 5 [Arabidopsis lyrata subsp. lyrata]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/313 (69%), Positives = 252/313 (80%), Gaps = 38/313 (12%)

Query: 20  IFAVSGIMTTLVIYGILQ--------------------------------------ASRK 41
           +FA+SGIM TLVIYG+LQ                                       S+K
Sbjct: 21  VFAISGIMITLVIYGLLQEKIMRVPYGLKKEYFTHSLFLVFCNRLTTSAVSAAALLGSKK 80

Query: 42  AIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRY 101
            +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+Y
Sbjct: 81  VLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKY 140

Query: 102 KGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDK 161
           +G+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDK
Sbjct: 141 RGFDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDK 200

Query: 162 LFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 221
           LFKGY+MEIHNQIFYTT+CS +LS +GLIL+GHL  A+DFV  H DC FD+ALLSTVAT 
Sbjct: 201 LFKGYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATA 260

Query: 222 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 281
           SQFFISYTIRTFGALTFA IMTTRQLVSI+LSC+WF HPLSWEQCIGS+IVFG+LY ++ 
Sbjct: 261 SQFFISYTIRTFGALTFAAIMTTRQLVSIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTL 320

Query: 282 FKKVSEKPRPSEH 294
            KK SEKP+ ++ 
Sbjct: 321 VKKRSEKPQAAQE 333

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557455|ref|XP_003547031.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/319 (69%), Positives = 257/319 (80%), Gaps = 38/319 (11%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQ---------------------------------- 37
           +D++  K  FAV+GIM TLV YG+LQ                                  
Sbjct: 17  RDNKFWKGAFAVAGIMLTLVTYGVLQEKIMRVPYGAEKEYFKHSLFLVFCNRITTSAVSA 76

Query: 38  ----ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 93
               AS+KA+DPVAP+YKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAK IPVM+WG
Sbjct: 77  CSLLASKKAMDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKTIPVMVWG 136

Query: 94  TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 153
            LIMQKRY+G DY LA L+TLGCS+FIL+P+GAD+SPYS+GRENTVWGV LMVGYLGFDG
Sbjct: 137 ALIMQKRYQGPDYLLAFLITLGCSVFILYPAGADMSPYSRGRENTVWGVLLMVGYLGFDG 196

Query: 154 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 213
           FTSTFQDKLF+GYDMEIHNQIFYTTLCSC+LSL+GLIL+GHL  A++FVY+H DCFFD+A
Sbjct: 197 FTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAVEFVYNHHDCFFDIA 256

Query: 214 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 273
           LLSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSWEQ IG++IVF
Sbjct: 257 LLSTVATVSQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAVIVF 316

Query: 274 GALYTRSFFKKVSEKPRPS 292
           G+LY +SF +K+ +K   S
Sbjct: 317 GSLYGKSFSRKMPQKTTSS 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547228|ref|XP_003542018.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/331 (68%), Positives = 259/331 (78%), Gaps = 38/331 (11%)

Query: 6   ITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQ---------------------------- 37
           + +I   + +  K  F V+GIM TLV YG+LQ                            
Sbjct: 12  VDSIPRDNDKFWKGSFTVAGIMVTLVTYGLLQEKIMRVPYGTEKEYFKHSLFLVFCNRIT 71

Query: 38  ----------ASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMI 87
                     AS+K +DPVAP+YKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAKMI
Sbjct: 72  TSAVSAGSLLASKKVLDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMI 131

Query: 88  PVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVG 147
           PVM+WG LIMQKRY+G DY LA LVTLGCS FIL+P+G D+SPYS+GRENTVWG+ LMVG
Sbjct: 132 PVMVWGALIMQKRYQGPDYLLAFLVTLGCSAFILYPAGTDMSPYSRGRENTVWGILLMVG 191

Query: 148 YLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD 207
           YLGFDGFTSTFQDKLF+GYDMEIHNQIFYTTLCSCVLSL+GLIL+GHL  AI+FVYHH D
Sbjct: 192 YLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCVLSLTGLILQGHLIPAIEFVYHHHD 251

Query: 208 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCI 267
           CFFD+ALLSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSWEQ I
Sbjct: 252 CFFDIALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWI 311

Query: 268 GSIIVFGALYTRSFFKKVSEKPRPSEHPMEN 298
           G++IVFG+LY +SF +K+ +K  PS   ++N
Sbjct: 312 GAVIVFGSLYGKSFSRKMPQKTTPSIALVQN 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
TAIR|locus:2075311	347	UTR5 "AT3G46180" [Arabidopsis	0.883	0.806	0.755	3e-117
TAIR|locus:2174289	344	AT5G59740 "AT5G59740" [Arabido	0.876	0.808	0.758	7.1e-116
DICTYBASE|DDB_G0269602	359	slc35b2 "solute carrier family	0.820	0.724	0.481	9.9e-62
ZFIN|ZDB-GENE-050213-1	435	slc35b2 "solute carrier family	0.782	0.570	0.407	3.7e-50
MGI|MGI:1921086	431	Slc35b2 "solute carrier family	0.835	0.614	0.388	6.8e-49
UNIPROTKB|F1NC34	431	SLC35B2 "Uncharacterized prote	0.880	0.647	0.393	6e-48
RGD|1565318	431	Slc35b2 "solute carrier family	0.835	0.614	0.384	1.2e-47
UNIPROTKB|Q3ZBB0	433	SLC35B2 "Uncharacterized prote	0.876	0.642	0.371	1.6e-47
UNIPROTKB|F1PA99	414	SLC35B2 "Uncharacterized prote	0.835	0.640	0.383	6.8e-47
UNIPROTKB|J9NY30	432	SLC35B2 "Uncharacterized prote	0.835	0.613	0.383	6.8e-47

TAIR|locus:2075311 UTR5 "AT3G46180" [Arabidopsis thaliana (taxid:3702)]

 Score = 1155 (411.6 bits), Expect = 3.0e-117, P = 3.0e-117
 Identities = 213/282 (75%), Positives = 245/282 (86%)

Query:    10 GVKDSRVLKMIFAV--SGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQY 67
             G+K       +F V  + + T+ V    L AS+K +DPVAPVYKYCL+S++NILTTTCQY
Sbjct:    47 GLKKEYFKHSLFLVFCNRLTTSAVSAAALLASKKVLDPVAPVYKYCLISVTNILTTTCQY 106

Query:    68 EALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGAD 127
             EALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+Y+G+DY +A LVTLGCS+FILFP+G D
Sbjct:   107 EALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYRGFDYLVAFLVTLGCSVFILFPAGDD 166

Query:   128 LSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLS 187
             +SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTT+CS +LS +
Sbjct:   167 ISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTICSSILSFT 226

Query:   188 GLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQL 247
             GLIL+GHL  A+DFV  H DC FD+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL
Sbjct:   227 GLILQGHLLPAVDFVSRHRDCLFDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQL 286

Query:   248 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP 289
              SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++F KK SEKP
Sbjct:   287 ASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTFVKKKSEKP 328

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2174289 AT5G59740 "AT5G59740" [Arabidopsis thaliana (taxid:3702)]

 Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
 Identities = 214/282 (75%), Positives = 245/282 (86%)

Query:    17 LKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFP 76
             L ++F  + + T+ V  G L AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFP
Sbjct:    56 LFLVFC-NRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFP 114

Query:    77 VQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRE 136
             VQTLAKCAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRE
Sbjct:   115 VQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRE 174

Query:   137 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLF 196
             NTVWGVSLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL 
Sbjct:   175 NTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLL 234

Query:   197 LAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW 256
              A+DFV  H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+W
Sbjct:   235 PAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIW 294

Query:   257 FRHPLSWEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 295
             F HPLSWEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct:   295 FSHPLSWEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELP 336

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

DICTYBASE|DDB_G0269602 slc35b2 "solute carrier family 35 member B2" [Dictyostelium discoideum (taxid:44689)]

 Score = 594 (214.2 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
 Identities = 129/268 (48%), Positives = 174/268 (64%)

Query:    13 DSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKY 72
             DS  L +   V   +  +VI  +L+   +++  VAP++KY  V++SN   T CQYEALKY
Sbjct:    67 DSTFLVLSNRVFAALMAIVI--VLKRG-ESLKNVAPLHKYVGVALSNFCATWCQYEALKY 123

Query:    73 VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 132
             V+FP QTL KC KM+PVM+ GT I  K+Y   DY +AL +T GC IF L  +G  +S  +
Sbjct:   124 VNFPTQTLGKCGKMLPVMLVGTFISGKKYGLKDYSIALTITTGCMIFFL--TGK-IS--N 178

Query:   133 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE 192
                 NT +G+ LM  Y+ FD FTSTFQ+K+FKGY M  ++Q+ Y   CS ++S+  LIL 
Sbjct:   179 NESSNTSYGIILMALYMFFDSFTSTFQEKMFKGYTMSTYDQMIYVNGCSSIISVFILILN 238

Query:   193 GHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVL 252
             G LF AI+F+  H   FFD  +LS  A   Q  I YTI+ FGAL F+TIM TRQ+VSI+L
Sbjct:   239 GRLFPAIEFISTHNGVFFDSTMLSASAGLGQMVIYYTIKEFGALVFSTIMVTRQMVSIIL 298

Query:   253 SCVWFRHPLSWEQCIGSIIVFGALYTRS 280
             S + + HPLS  Q IG+++VFG LY +S
Sbjct:   299 STLIYLHPLSNTQWIGALLVFGTLYYKS 326

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-050213-1 slc35b2 "solute carrier family 35, member B2" [Danio rerio (taxid:7955)]

 Score = 492 (178.3 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
 Identities = 104/255 (40%), Positives = 157/255 (61%)

Query:    47 APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDY 106
             AP+YKY   S+SNIL++ CQYEALK++SFP Q LAK +K+IPVM+ G ++ +K Y+ ++Y
Sbjct:   186 APMYKYSFASLSNILSSWCQYEALKFISFPTQVLAKASKVIPVMLMGKIVSRKSYEYWEY 245

Query:   107 FLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY 166
               A+L++LG S+F+L  S  D  P +     T  GV ++ GY+ FD FTS +QD LFK Y
Sbjct:   246 LTAVLISLGVSMFLL-SSSTDKHPSTV---TTFSGVLILAGYIVFDSFTSNWQDNLFK-Y 300

Query:   167 DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFI 226
              M     +F   L SC+ ++  L+ +G  F ++ F+  H +  F   LLS  +   Q FI
Sbjct:   301 KMSSVQMMFGVNLFSCLFTVGSLLEQGAFFNSLAFMTRHSEFAFHAVLLSVCSAFGQLFI 360

Query:   227 SYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 286
              +TI  FGA  F  IMT RQ ++I+LSC  + HP+S    +G  +VF AL+ R + +   
Sbjct:   361 FFTIAQFGAAVFTIIMTLRQALAILLSCFLYGHPVSLTGGLGVGVVFLALFLRIYARSRV 420

Query:   287 EKP--RPSEHPMENM 299
             +K   RP++ P++ +
Sbjct:   421 KKSTKRPAQTPVQKV 435

GO:0055085 "transmembrane transport" evidence=IEA

GO:0051216 "cartilage development" evidence=IMP

GO:0001503 "ossification" evidence=IMP

GO:0030166 "proteoglycan biosynthetic process" evidence=IMP

GO:0042476 "odontogenesis" evidence=IMP

GO:0030198 "extracellular matrix organization" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0001501 "skeletal system development" evidence=IMP

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP

GO:0001649 "osteoblast differentiation" evidence=IMP

MGI|MGI:1921086 Slc35b2 "solute carrier family 35, member B2" [Mus musculus (taxid:10090)]

 Score = 467 (169.5 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
 Identities = 106/273 (38%), Positives = 160/273 (58%)

Query:    30 LVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV 89
             LV+ G+    RK     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPV
Sbjct:   164 LVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPV 223

Query:    90 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYL 149
             M+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+
Sbjct:   224 MMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLVLLAGYI 279

Query:   150 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 209
              FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +  
Sbjct:   280 AFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRHSEFA 338

Query:   210 FDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGS 269
                 LLS  +   Q FI YTI  FGA  F  IMT RQ ++I+LSC+ + H ++    +G 
Sbjct:   339 LHALLLSICSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTVVGGLGV 398

Query:   270 IIVFGALYTRSFF---KKVSEKPRPSEHPMENM 299
              +VF AL  R +    K+  +K  P+E P++ +
Sbjct:   399 AVVFTALLLRVYARGRKQRGKKAVPTEPPVQKV 431

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1NC34 SLC35B2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 468 (169.8 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
 Identities = 115/292 (39%), Positives = 166/292 (56%)

Query:    12 KDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALK 71
             KDS+ L  +F ++ I+    + G+  A  K     A +YKY   S+SNIL++ CQYEALK
Sbjct:   149 KDSQFL--VF-MNRILA-FTVAGLYCALTKQPRHGAAMYKYSFASLSNILSSWCQYEALK 204

Query:    72 YVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 131
             Y+SFP Q LAK +K+IPVM+ G L+  K Y+ ++Y  A L+++G S+F+L  S A     
Sbjct:   205 YISFPTQVLAKASKVIPVMMMGKLVSHKSYEYWEYLTAALISVGVSMFLL--SSAPNRHV 262

Query:   132 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL 191
             S     T  GV L+ GY+ FD FTS +QD LF  Y M     +F   + SC+ ++  L+ 
Sbjct:   263 ST--VTTFSGVVLLAGYIVFDSFTSNWQDALFT-YKMSPVQMMFGVNVFSCLFTVGSLLE 319

Query:   192 EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIV 251
             +G L  ++ F+  H +      LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+
Sbjct:   320 QGALLESVHFMARHSEFTAHAVLLSVCSACGQLFIFYTINQFGAAVFTIIMTLRQAFAIL 379

Query:   252 LSCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEHPMENM 299
             LSC+ + H ++    +G  +VF AL    Y RS  KK S+K  P E P++ +
Sbjct:   380 LSCLIYGHTVTVVGGLGIAVVFMALFLRVYARSRMKKRSKKLPPGETPVQKV 431

GO:0016021 "integral to membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

RGD|1565318 Slc35b2 "solute carrier family 35, member B2" [Rattus norvegicus (taxid:10116)]

 Score = 459 (166.6 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
 Identities = 105/273 (38%), Positives = 159/273 (58%)

Query:    30 LVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV 89
             LV+ G+    RK     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPV
Sbjct:   164 LVVAGLYCILRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPV 223

Query:    90 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYL 149
             M+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+
Sbjct:   224 MMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLVLLAGYI 279

Query:   150 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 209
              FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +  
Sbjct:   280 AFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRHSEFA 338

Query:   210 FDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGS 269
                 LLS  +   Q FI YTI  FGA  F  IMT RQ ++I+LSC+ + H ++    +G 
Sbjct:   339 LHALLLSVCSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTVVGGLGV 398

Query:   270 IIVFGALYTRSFF---KKVSEKPRPSEHPMENM 299
              +VF AL  R +    K+  +K  P+E  ++ +
Sbjct:   399 AVVFTALLLRVYARGRKQRGKKAVPTEPAVQKV 431

GO:0004871 "signal transducer activity" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA;ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA;ISO

UNIPROTKB|Q3ZBB0 SLC35B2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 462 (167.7 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
 Identities = 108/291 (37%), Positives = 165/291 (56%)

Query:    13 DSRVLKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKY 72
             DS+ L ++  +  +M   V   + +  R      AP+Y+Y   S+SN+L++ CQYEALK+
Sbjct:   152 DSQFLVLMNRILALMVAGVYCILCKQPRHG----APMYRYSFASLSNVLSSWCQYEALKF 207

Query:    73 VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 132
             VSFP Q LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P+S
Sbjct:   208 VSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PHS 264

Query:   133 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE 192
                  T+ G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +
Sbjct:   265 SPA-TTLSGLILLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQ 322

Query:   193 GHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVL 252
             G L   I F+  H +      LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+L
Sbjct:   323 GALLEGIRFMGRHSEFAAHTLLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILL 382

Query:   253 SCVWFRHPLSWEQCIGSIIVFGAL----YTRSFFKKVSEKPRPSEHPMENM 299
             SC+ + H ++    +G  +VF AL    Y R   K+  +K  P E  ++ +
Sbjct:   383 SCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAMPVESSVQKV 433

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PA99 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 459 (166.6 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
 Identities = 105/274 (38%), Positives = 157/274 (57%)

Query:    30 LVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV 89
             L++ G+     K     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPV
Sbjct:   146 LIVAGLYCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPV 205

Query:    90 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYL 149
             M+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+
Sbjct:   206 MLMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLILLAGYI 261

Query:   150 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 209
              FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +  
Sbjct:   262 AFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGTRFMGRHSEFA 320

Query:   210 FDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGS 269
                 LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G 
Sbjct:   321 AHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGV 380

Query:   270 IIVFGAL----YTRSFFKKVSEKPRPSEHPMENM 299
              +VF AL    Y R   K+  +K  P E P++ +
Sbjct:   381 AVVFAALLLRVYARGRLKQRGKKAVPVESPVQKV 414

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|J9NY30 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 459 (166.6 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
 Identities = 105/274 (38%), Positives = 157/274 (57%)

Query:    30 LVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV 89
             L++ G+     K     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPV
Sbjct:   164 LIVAGLYCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPV 223

Query:    90 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYL 149
             M+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+
Sbjct:   224 MLMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLILLAGYI 279

Query:   150 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 209
              FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +  
Sbjct:   280 AFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGTRFMGRHSEFA 338

Query:   210 FDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGS 269
                 LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G 
Sbjct:   339 AHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGV 398

Query:   270 IIVFGAL----YTRSFFKKVSEKPRPSEHPMENM 299
              +VF AL    Y R   K+  +K  P E P++ +
Sbjct:   399 AVVFAALLLRVYARGRLKQRGKKAVPVESPVQKV 432

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NMB6	UTR5B_ARATH	No assigned EC number	0.6845	0.9305	0.8575	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.1432.1 hypothetical protein (328 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	317
pfam08449	303	pfam08449, UAA, UAA transporter family	5e-76
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	8e-04

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  234 bits (600), Expect = 5e-76
 Identities = 88/262 (33%), Positives = 130/262 (49%), Gaps = 3/262 (1%)

Query: 26  IMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAK 85
           +  +LV    L   +K      P+  Y L+  +  L++    EALKY+S+P   + K  K
Sbjct: 41  LFISLVGLLYLLLFKKLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCK 100

Query: 86  MIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLM 145
           +IPVMI G LI  KRY    Y  ALL+TLG  IF L  +    +       +   G++L+
Sbjct: 101 LIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDN-VGIALL 159

Query: 146 VGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFL--AIDFVY 203
            G L  D  T   Q+KL+K Y       +FY+ L S    L GL+      L  A  F  
Sbjct: 160 FGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCL 219

Query: 204 HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSW 263
            H    F + L S      QFF+ Y I  FGALT   + T R+ VS++LS + F +PL+ 
Sbjct: 220 RHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTL 279

Query: 264 EQCIGSIIVFGALYTRSFFKKV 285
           +Q +G+++VF  ++  ++ KK 
Sbjct: 280 QQWLGTLLVFLGIFLYAYLKKK 301

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 151 FDGFTSTFQDKLFKGYDMEIHN---QIFYTTLCSCVLSLSGLILEG--HLFLAIDFVYHH 205
                     KL K       N    ++Y +  + ++ L GL+      L   I   +  
Sbjct: 11  LFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKLGKFILKFFGD 70

Query: 206 LDCFFDVALLSTVATTSQF--FISY-TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 262
           L     V LL      +      ++  +     LT +   T +++V IVLS + F  P++
Sbjct: 71  LKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVIIFGDPVT 130

Query: 263 WEQCIGSII-VFG-ALYTR 279
           +   +G  I + G  LY+ 
Sbjct: 131 FLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	317
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.95
PLN00411	358	nodulin MtN21 family protein; Provisional	99.94
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.92
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.92
PRK11689	295	aromatic amino acid exporter; Provisional	99.91
PRK11272	292	putative DMT superfamily transporter inner membran	99.91
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.91
PRK15430	296	putative chloramphenical resistance permease RarD;	99.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.88
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.86
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.86
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.85
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.8
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.8
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.79
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.78
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.75
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.75
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.74
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.68
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.67
KOG2765	416	consensus Predicted membrane protein [Function unk	99.66
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.61
KOG2766	336	consensus Predicted membrane protein [Function unk	99.57
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.57
COG2962	293	RarD Predicted permeases [General function predict	99.55
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.16
COG2510	140	Predicted membrane protein [Function unknown]	99.15
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.97
PRK15430	296	putative chloramphenical resistance permease RarD;	98.9
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.88
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.86
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.85
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.76
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.64
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.59
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.54
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.44
PLN00411	358	nodulin MtN21 family protein; Provisional	98.41
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.4
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.21
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.16
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.14
PRK11272	292	putative DMT superfamily transporter inner membran	98.12
COG2510	140	Predicted membrane protein [Function unknown]	98.12
COG2962	293	RarD Predicted permeases [General function predict	98.1
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.09
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.06
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.02
PRK11689	295	aromatic amino acid exporter; Provisional	97.88
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.84
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.82
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.75
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.67
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.62
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.62
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.61
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.6
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.54
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.52
PRK13499	345	rhamnose-proton symporter; Provisional	97.48
PRK13499	345	rhamnose-proton symporter; Provisional	97.45
COG2076	106	EmrE Membrane transporters of cations and cationic	97.45
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.4
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.37
PRK11431	105	multidrug efflux system protein; Provisional	97.36
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.33
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.32
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.28
COG2076	106	EmrE Membrane transporters of cations and cationic	97.15
PRK11431	105	multidrug efflux system protein; Provisional	97.13
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.08
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.91
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.88
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.64
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.48
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.41
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.34
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.2
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.19
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.98
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.33
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.67
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.62
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	94.61
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.8
KOG1581	327	consensus UDP-galactose transporter related protei	93.68
KOG2765	416	consensus Predicted membrane protein [Function unk	93.44
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.62
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	91.79
KOG1580	337	consensus UDP-galactose transporter related protei	91.41
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	90.45
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	89.96
KOG3912	372	consensus Predicted integral membrane protein [Gen	87.37
KOG4831	125	consensus Unnamed protein [Function unknown]	86.84
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	83.65
PRK02237	109	hypothetical protein; Provisional	83.34
COG4858	226	Uncharacterized membrane-bound protein conserved i	83.11

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-46  Score=330.13  Aligned_cols=283  Identities=48%  Similarity=0.843  Sum_probs=259.3

Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHh--------------------------------------ccCCCCCCCchhH
Q 021135           10 GVKDSRVLKMIFAVSGIMTTLVIYGILQA--------------------------------------SRKAIDPVAPVYK   51 (317)
Q Consensus        10 ~~~~~~~~~~~~~~~gi~~~~~~~g~~qe--------------------------------------~~~~~~~~~~~~~   51 (317)
                      +.+..+.+++++|+.||+.+++.||++||                                      ++++.+++.||+.
T Consensus         6 ~~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~   85 (327)
T KOG1581|consen    6 GGMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYK   85 (327)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhH
Confidence            45667789999999999999999999999                                      1233556789999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCC
Q 021135           52 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY  131 (317)
Q Consensus        52 ~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  131 (317)
                      |..+|+++..+.+++|.||+|+++|++++.|+||.+|||+++.++.|+|++.++|+...++..|+.++...+++ + +.+
T Consensus        86 y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s-~-s~~  163 (327)
T KOG1581|consen   86 YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNS-D-SSS  163 (327)
T ss_pred             HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCC-C-Ccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877542 2 223


Q ss_pred             CCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHH
Q 021135          132 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD  211 (317)
Q Consensus       132 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  211 (317)
                      ..+..+.++|+.++..++++|++++..|++++++++.+++++|+++|++++++.....+..|.+.+..++...||+.++.
T Consensus       164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~D  243 (327)
T KOG1581|consen  164 KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFD  243 (327)
T ss_pred             ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHH
Confidence            33456889999999999999999999999999999999999999999999999999888889899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccccCCCCC
Q 021135          212 VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRP  291 (317)
Q Consensus       212 il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~~~~~  291 (317)
                      ++.++.++++||.|++++++++||.+.++++++|+++++++|+++|||++++.||.|..++++|+.+..+.|+|++.+++
T Consensus       244 i~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~~~  323 (327)
T KOG1581|consen  244 ILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQPRK  323 (327)
T ss_pred             HHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhccCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988665555


Q ss_pred             CCC
Q 021135          292 SEH  294 (317)
Q Consensus       292 ~~~  294 (317)
                      .++
T Consensus       324 k~~  326 (327)
T KOG1581|consen  324 KKA  326 (327)
T ss_pred             ccC
Confidence            543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.8e-45  Score=311.21  Aligned_cols=272  Identities=31%  Similarity=0.496  Sum_probs=245.7

Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHhc-----------------------------------------cCCCCCCCc
Q 021135           10 GVKDSRVLKMIFAVSGIMTTLVIYGILQAS-----------------------------------------RKAIDPVAP   48 (317)
Q Consensus        10 ~~~~~~~~~~~~~~~gi~~~~~~~g~~qe~-----------------------------------------~~~~~~~~~   48 (317)
                      +.-.++..+|.+|+.|++.|+..||+.||+                                         ++....+.|
T Consensus         5 ~s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~   84 (337)
T KOG1580|consen    5 RSWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTP   84 (337)
T ss_pred             ccccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCc
Confidence            455778899999999999999999999991                                         112233578


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCC
Q 021135           49 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADL  128 (317)
Q Consensus        49 ~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  128 (317)
                      -+.|..+++.+.+++..+|.|++|+|+|++++.|+|+|+|+|+++.++.||+|+|++|..++++++||++++..+.  +.
T Consensus        85 ~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~--Kv  162 (337)
T KOG1580|consen   85 TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN--KV  162 (337)
T ss_pred             chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc--cc
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999988742  21


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHH
Q 021135          129 SPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC  208 (317)
Q Consensus       129 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  208 (317)
                      .+  ..+....+|-++.++++.+|++++..|||+.+.++.+.-++|+|+|+++.+++...++.+||+++.+.+..++|..
T Consensus       163 ~g--~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~  240 (337)
T KOG1580|consen  163 GG--AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYV  240 (337)
T ss_pred             CC--CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHH
Confidence            11  1124456799999999999999999999999988888889999999999999988888999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          209 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       209 ~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                      |+.+..+++++.+||.|+|..+..+||++.|+++++|++++++.|+++|++|++..||+|.++++.|+.......++
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888775553

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=2.5e-40  Score=304.98  Aligned_cols=268  Identities=37%  Similarity=0.565  Sum_probs=238.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHh---------------------------------ccCCCCCCCchhHHHHHHHHHHHHHHH
Q 021135           19 MIFAVSGIMTTLVIYGILQA---------------------------------SRKAIDPVAPVYKYCLVSMSNILTTTC   65 (317)
Q Consensus        19 ~~~~~~gi~~~~~~~g~~qe---------------------------------~~~~~~~~~~~~~~~~~s~~~~~~~~~   65 (317)
                      +++|+.|++.+++.++++||                                 .+++.+++.|+++|++.+++++++..+
T Consensus         1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (303)
T PF08449_consen    1 FLICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVL   80 (303)
T ss_pred             CEeeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999                                 122445678999999999999999999


Q ss_pred             HHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCCCCCchHHHHHHH
Q 021135           66 QYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLM  145 (317)
Q Consensus        66 ~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~  145 (317)
                      +|.||+|+|+|+++++|+++|+++|+++.+++|||++++||++++++++|++++...+...+ +.++........|++++
T Consensus        81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~-~~~~~~~~~~~~G~~ll  159 (303)
T PF08449_consen   81 SNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS-SSSNSSSFSSALGIILL  159 (303)
T ss_pred             HHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc-cccccccccchhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999987643211 11111112233499999


Q ss_pred             HHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHH--hCchhHHhHhhhcchHHHHHHHHHHHHHHHHH
Q 021135          146 VGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQ  223 (317)
Q Consensus       146 l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~  223 (317)
                      +++.++||+.+++|||++++++.+++++++|+|.++.++.++..+.  .++..+..++...+|..+..++..++++++++
T Consensus       160 ~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~  239 (303)
T PF08449_consen  160 LLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQ  239 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998888777  78888888888889998888888899999999


Q ss_pred             HHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccccC
Q 021135          224 FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  287 (317)
Q Consensus       224 ~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~  287 (317)
                      .+++++++++||++.++++++||++++++|+++|||++++.||+|+++++.|+.++.+.|+||+
T Consensus       240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            9999999999999999999999999999999999999999999999999999999999998764

; GO: 0055085 transmembrane transport

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.3e-40  Score=284.73  Aligned_cols=267  Identities=28%  Similarity=0.428  Sum_probs=245.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhc--------------------------------cCCCCCCCchhHHHHHHHHH
Q 021135           12 KDSRVLKMIFAVSGIMTTLVIYGILQAS--------------------------------RKAIDPVAPVYKYCLVSMSN   59 (317)
Q Consensus        12 ~~~~~~~~~~~~~gi~~~~~~~g~~qe~--------------------------------~~~~~~~~~~~~~~~~s~~~   59 (317)
                      +.+++.||++|+.|+|+.++.+|++||.                                .+..++..|||.|..+++..
T Consensus        37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t  116 (367)
T KOG1582|consen   37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLT  116 (367)
T ss_pred             cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhh
Confidence            4566899999999999999999999991                                13345578999999999999


Q ss_pred             HHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCCCCCchH
Q 021135           60 ILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTV  139 (317)
Q Consensus        60 ~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~  139 (317)
                      .+.+.++|.||.|+++|+++++|+||.+|||+.+.++.++||++.++.+..+..+|+++++..|+  +.+     .+++.
T Consensus       117 ~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs--~~s-----PNF~~  189 (367)
T KOG1582|consen  117 VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS--QTS-----PNFNL  189 (367)
T ss_pred             hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc--ccC-----CCcce
Confidence            99999999999999999999999999999999999999999999999999999999999998853  332     26788


Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchH-HHHHHHHHHHH
Q 021135          140 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD-CFFDVALLSTV  218 (317)
Q Consensus       140 ~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~il~l~~~  218 (317)
                      .|+.++..|+++||+.+..||+.++.++.+..|+++|...++.++.+..+..+|++++.|.++..||. .....++.++.
T Consensus       190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~  269 (367)
T KOG1582|consen  190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLA  269 (367)
T ss_pred             eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHH
Confidence            99999999999999999999999999888889999999999999999889999999999999988885 66677777889


Q ss_pred             HHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          219 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       219 ~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                      +.+|+.+....++.+||.+++.+++.|+.+++++|+++|.+|+|..+..|..+|+.|+++..++|+.
T Consensus       270 gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  270 GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999843

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=5.8e-28  Score=222.57  Aligned_cols=232  Identities=13%  Similarity=0.062  Sum_probs=184.3

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCC
Q 021135           46 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  125 (317)
Q Consensus        46 ~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~  125 (317)
                      +..++.+++.|++++....+.|.|++|++++.+++++++.|+++++++++++|||++++++++++++++|+++....   
T Consensus        62 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~---  138 (302)
T TIGR00817        62 SALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT---  138 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC---
Confidence            44677889999998888999999999999999999999999999999999999999999999999999999876422   


Q ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHh-Hhhh-
Q 021135          126 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAI-DFVY-  203 (317)
Q Consensus       126 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~-  203 (317)
                       +       .+.+..|+++++++.++++++.++.||..++.+.++.+.+.|++.+++++.+|.....++..... +... 
T Consensus       139 -~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~  210 (302)
T TIGR00817       139 -E-------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQA  210 (302)
T ss_pred             -c-------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHh
Confidence             1       13456799999999999999999999987744567888999999999988888765433211100 0100 


Q ss_pred             ---cchH-HHHHHHHHHH-HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHh
Q 021135          204 ---HHLD-CFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  278 (317)
Q Consensus       204 ---~~~~-~~~~il~l~~-~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~  278 (317)
                         ..+. .+...+..+. +..+.+.++++++++.||+++++.++++|++++++|++++||++|+.|++|.+++++|+++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l  290 (302)
T TIGR00817       211 ISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL  290 (302)
T ss_pred             hcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence               0111 1211222222 2223345666799999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccccCC
Q 021135          279 RSFFKKVSEK  288 (317)
Q Consensus       279 ~~~~k~~~~~  288 (317)
                      +++.|+||++
T Consensus       291 ~~~~k~~~~~  300 (302)
T TIGR00817       291 YSRVKAQKPK  300 (302)
T ss_pred             HHHHhccCcC
Confidence            9987765543

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=7.8e-26  Score=208.44  Aligned_cols=236  Identities=15%  Similarity=0.177  Sum_probs=189.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCC
Q 021135           46 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  125 (317)
Q Consensus        46 ~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~  125 (317)
                      +.||++|++++++.+.++++.+.|++|++.+..+++.++..+++++++++++|+|+++.|++|++++++|++++...|..
T Consensus        76 ~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   76 KRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999998776431


Q ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHH-HhCchhHHhHhhhc
Q 021135          126 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLI-LEGHLFLAIDFVYH  204 (317)
Q Consensus       126 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~  204 (317)
                      +.  ..+.+.++...|+++++++++++|++++.+|++.++.  +..+.+....+++.++..+... ++.+-.+.   .+.
T Consensus       156 ~~--~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~---~~w  228 (334)
T PF06027_consen  156 SG--SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAILERSGIES---IHW  228 (334)
T ss_pred             cc--ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHheehhhhhc---cCC
Confidence            11  1111235678899999999999999999999998864  5678888888999888777543 33322221   122


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcc
Q 021135          205 HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       205 ~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~  284 (317)
                      +++.+..++..+++...-+.+....++..+|+..++-..+-.+.++++++++||++++|..++|.++|+.|++++...++
T Consensus       229 ~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  229 TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            33333333333333334444556678999999999999999999999999999999999999999999999999887666


Q ss_pred             ccCC
Q 021135          285 VSEK  288 (317)
Q Consensus       285 ~~~~  288 (317)
                      +.++
T Consensus       309 ~~~~  312 (334)
T PF06027_consen  309 PEEE  312 (334)
T ss_pred             cccc
Confidence            5443

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=1.3e-25  Score=210.76  Aligned_cols=226  Identities=14%  Similarity=0.123  Sum_probs=179.4

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCC
Q 021135           47 APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA  126 (317)
Q Consensus        47 ~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~  126 (317)
                      ..+++.+++|++++......+.|+++++++.++++|++.|+++++++++++|||++++++++++++++|+++.+..    
T Consensus       112 ~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~----  187 (350)
T PTZ00343        112 LFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK----  187 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc----
Confidence            3567889999999888878889999999999999999999999999999999999999999999999999998643    


Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCC-----CCHHHHHHHHHHHHHHHHHHHHH-HhCc-hhHHh
Q 021135          127 DLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-----MEIHNQIFYTTLCSCVLSLSGLI-LEGH-LFLAI  199 (317)
Q Consensus       127 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~g~-~~~~~  199 (317)
                      +.       +.++.|++++++|.+++|+++++.||+.++++     .++.+...++..++.++.+|... .++. ....+
T Consensus       188 ~~-------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~  260 (350)
T PTZ00343        188 EL-------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVW  260 (350)
T ss_pred             cc-------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            21       34678999999999999999999999876543     45566666678899988888754 3332 11111


Q ss_pred             Hhh--hcchHHHHHHHHHHHHHHHHHHHHH----HHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhH
Q 021135          200 DFV--YHHLDCFFDVALLSTVATTSQFFIS----YTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF  273 (317)
Q Consensus       200 ~~~--~~~~~~~~~il~l~~~~~~g~~~~~----~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~  273 (317)
                      ...  ......+..+++..+.+.+.+++++    +++++.+|.+.++.++++|++++++|+++|||++|+.|++|.++++
T Consensus       261 ~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii  340 (350)
T PTZ00343        261 TNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAI  340 (350)
T ss_pred             HHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHH
Confidence            000  0011112223333334455555544    5899999999999999999999999999999999999999999999


Q ss_pred             hHHHhhhhhc
Q 021135          274 GALYTRSFFK  283 (317)
Q Consensus       274 ~Gi~~~~~~k  283 (317)
                      +|++++++.|
T Consensus       341 ~Gv~lYs~~k  350 (350)
T PTZ00343        341 LGALLYSLFK  350 (350)
T ss_pred             HHHHHHhhcC
Confidence            9999988764

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.95  E-value=7e-28  Score=209.60  Aligned_cols=234  Identities=21%  Similarity=0.382  Sum_probs=186.9

Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHHHHHHhhhc-CChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHh
Q 021135           41 KAIDPVAPVYKYCLVSMSNILTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  119 (317)
Q Consensus        41 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~aL~~-~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~  119 (317)
                      ...+|++|.|.|++.-.+++..+.++|+++++ ++.|.++++|+..++.+|++++++.||||+.+|+.+++++.+|++++
T Consensus        56 ~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIc  135 (330)
T KOG1583|consen   56 FTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIIC  135 (330)
T ss_pred             cccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeE
Confidence            34567899999999999999999999999998 99999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCC----CCCC---CCch--HHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021135          120 ILFPSGADLSP----YSKG---RENT--VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLI  190 (317)
Q Consensus       120 ~~~~~~~~~~~----~~~~---~~~~--~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (317)
                      +...+ .|...    -+.+   ....  .+|+.++..|++..|..+++||+.++||+.++.|.+||+...+.+..+   +
T Consensus       136 Tl~s~-~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl---f  211 (330)
T KOG1583|consen  136 TLFSS-KDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL---F  211 (330)
T ss_pred             EeecC-cchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH---H
Confidence            77532 12211    0111   1122  358999999999999999999999999999999999999988855432   3


Q ss_pred             HhCchhHHhHhhhcc------------hHHHHHHHHHHHHHHHHHHHHHH----HHHhhChHHHHHHHHHHHHHHHHHHH
Q 021135          191 LEGHLFLAIDFVYHH------------LDCFFDVALLSTVATTSQFFISY----TIRTFGALTFATIMTTRQLVSIVLSC  254 (317)
Q Consensus       191 ~~g~~~~~~~~~~~~------------~~~~~~il~l~~~~~~g~~~~~~----~l~~~~a~~~si~~~~~~v~aiils~  254 (317)
                      ..+++.+.+.....+            |..|++    -+++.+.|++...    .-.+.++++++++.++||.++.++|+
T Consensus       212 ~~~div~~~~~~~~se~~~~p~~g~~vP~~~~y----Ll~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~Si  287 (330)
T KOG1583|consen  212 MGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVY----LLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSI  287 (330)
T ss_pred             hcchHHHHHHHHhcCcceeccccCccccHHHHH----HHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhhee
Confidence            334454444433222            334443    3456777764333    34899999999999999999999999


Q ss_pred             HHhcCCCchhhhhhhhHhHhHHHhhhhh
Q 021135          255 VWFRHPLSWEQCIGSIIVFGALYTRSFF  282 (317)
Q Consensus       255 l~f~e~~t~~~~~G~~lv~~Gi~~~~~~  282 (317)
                      +.|++|+|+++|+|..+|+.|-.++...
T Consensus       288 iyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  288 IYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             eEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999986555443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.94  E-value=3e-24  Score=201.38  Aligned_cols=234  Identities=15%  Similarity=0.234  Sum_probs=171.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHH------hccccchhHHHHHHHHHHhHHHhhccC
Q 021135           50 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI------MQKRYKGYDYFLALLVTLGCSIFILFP  123 (317)
Q Consensus        50 ~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~------~k~~~~~~~~~~~~l~~~Gv~l~~~~~  123 (317)
                      ..+.+.+++.+....+.+.+++|++++.+.++.++.|++++++++++      +|||.+++|+++++++++|+.++...+
T Consensus        79 ~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~  158 (358)
T PLN00411         79 SKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH  158 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence            45566666654455689999999999999999999999999999999      699999999999999999999876432


Q ss_pred             CCCCCC------------C--CCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH-HH
Q 021135          124 SGADLS------------P--YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSL-SG  188 (317)
Q Consensus       124 ~~~~~~------------~--~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~  188 (317)
                      ......            .  ...+......|+++++.+++++|++.+.++|..+++.. .....+++..++.+... +.
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~  237 (358)
T PLN00411        159 GPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA-AFTVSFLYTVCVSIVTSMIG  237 (358)
T ss_pred             CcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-HhHHHHHHHHHHHHHHHHHH
Confidence            100000            0  00011223569999999999999999999998877632 33444444444433332 33


Q ss_pred             HHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh
Q 021135          189 LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIG  268 (317)
Q Consensus       189 ~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G  268 (317)
                      ...+++-...+ ....+.. +..+++.++++.+++.++++++++.||.+++++.+++|++++++|++++||++++.+++|
T Consensus       238 l~~~~~~~~~~-~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG  315 (358)
T PLN00411        238 LVVEKNNPSVW-IIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG  315 (358)
T ss_pred             HHHccCCcccc-eeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence            33332111111 0111222 234556666667888899999999999999999999999999999999999999999999


Q ss_pred             hhHhHhHHHhhhhhcccc
Q 021135          269 SIIVFGALYTRSFFKKVS  286 (317)
Q Consensus       269 ~~lv~~Gi~~~~~~k~~~  286 (317)
                      .++|+.|+++..+.|+|+
T Consensus       316 ~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        316 GILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHhhhhhh
Confidence            999999999988765544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.92  E-value=1.5e-25  Score=204.18  Aligned_cols=261  Identities=20%  Similarity=0.232  Sum_probs=207.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHH
Q 021135           17 LKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI   96 (317)
Q Consensus        17 ~~~~~~~~gi~~~~~~~g~~qe~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~   96 (317)
                      +..+-++.+.......+..-....++..++.+++..+++|+.++.+.++.|.|++|+|+++++++|++.|+++.++++++
T Consensus        51 lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~  130 (316)
T KOG1441|consen   51 LTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLL  130 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHH
Confidence            34433344444433333323223333345689999999999999999999999999999999999999999999999999


Q ss_pred             hccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHH--ccCCCCHHHHH
Q 021135           97 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF--KGYDMEIHNQI  174 (317)
Q Consensus        97 ~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~--~~~~~~~~~~~  174 (317)
                      .+|+++++.+++++.++.||.+.+..+           .+.+++|++.++.+.+..+..+++.+++.  ++.+.++.+++
T Consensus       131 ~~~~~s~~~~lsL~piv~GV~ias~~e-----------~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll  199 (316)
T KOG1441|consen  131 LGKTYSSMTYLSLLPIVFGVAIASVTE-----------LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLL  199 (316)
T ss_pred             hCCCCcceEEEEEEEeeeeEEEeeecc-----------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHH
Confidence            999999999999999999999987652           25789999999999999999999999998  46678999999


Q ss_pred             HHHHHHHHHHHH-HHHHH-hCchhHHhHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHH
Q 021135          175 FYTTLCSCVLSL-SGLIL-EGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVL  252 (317)
Q Consensus       175 ~~~~~~~~~~~~-~~~~~-~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiil  252 (317)
                      .|+.+++..+++ |.... +++....+.....+.. ....++.+++...-+...|.++++++|++.++.++++.++.++.
T Consensus       200 ~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~  278 (316)
T KOG1441|consen  200 YYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVV  278 (316)
T ss_pred             HHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEe
Confidence            999999999988 76543 3322100000001111 12223335666677788899999999999999999999999999


Q ss_pred             HHHHhcCCCchhhhhhhhHhHhHHHhhhhhccccCCC
Q 021135          253 SCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP  289 (317)
Q Consensus       253 s~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~~~  289 (317)
                      |+++|++|+|+.|..|+++.+.|+++|++.|++++++
T Consensus       279 s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  279 SWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             EeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            9999999999999999999999999999999876654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.92  E-value=1.4e-22  Score=186.61  Aligned_cols=230  Identities=13%  Similarity=0.187  Sum_probs=170.6

Q ss_pred             CchhHHHHHHHHHH-HHHHHHHHhhhc-CChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCC
Q 021135           47 APVYKYCLVSMSNI-LTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS  124 (317)
Q Consensus        47 ~~~~~~~~~s~~~~-~~~~~~~~aL~~-~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~  124 (317)
                      .+++..+..++... ....+.+.+++| ++.+...++.++.|+++++++++++|||++++++++++++++|+.++...+ 
T Consensus        56 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~-  134 (299)
T PRK11453         56 VPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDS-  134 (299)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcccc-
Confidence            34555555565433 334577889988 688888888999999999999999999999999999999999999886431 


Q ss_pred             CCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCC-CCHHHHHHHHHHHHHHHHHHHH-HHhCchhHHhHhh
Q 021135          125 GADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-MEIHNQIFYTTLCSCVLSLSGL-ILEGHLFLAIDFV  202 (317)
Q Consensus       125 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~  202 (317)
                         .+    +.+.+..|+++++++.++++.+.+.++|..++.+ .......++....+.+...... ..+++.....+..
T Consensus       135 ---~~----~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (299)
T PRK11453        135 ---LN----GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLV  207 (299)
T ss_pred             ---CC----CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhc
Confidence               11    0123457999999999999999999998765432 1222233333333332222221 2222211111111


Q ss_pred             hcchHHHHHHHHHHH-HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          203 YHHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       203 ~~~~~~~~~il~l~~-~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      ..++..|..++++++ ++.+++.++++++++.++.+++++..++|+++.+++++++||++++.+++|.++++.|+++..+
T Consensus       208 ~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        208 TIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            234567888888875 5668889999999999999999999999999999999999999999999999999999998887


Q ss_pred             hcc
Q 021135          282 FKK  284 (317)
Q Consensus       282 ~k~  284 (317)
                      .++
T Consensus       288 ~~~  290 (299)
T PRK11453        288 GLR  290 (299)
T ss_pred             chh
Confidence            665

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.91  E-value=1e-22  Score=187.10  Aligned_cols=227  Identities=12%  Similarity=0.012  Sum_probs=164.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhhc----CChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccC
Q 021135           48 PVYKYCLVSMSNILTTTCQYEALKY----VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  123 (317)
Q Consensus        48 ~~~~~~~~s~~~~~~~~~~~~aL~~----~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~  123 (317)
                      +++..+..++..+....+.+.+++|    .+.....++.++.|+++++++++++|||+++++++++++.++|++++...+
T Consensus        60 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~  139 (295)
T PRK11689         60 PKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGD  139 (295)
T ss_pred             cHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCC
Confidence            3344444444455556777777765    455667889999999999999999999999999999999999999886442


Q ss_pred             CCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhh
Q 021135          124 SGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY  203 (317)
Q Consensus       124 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  203 (317)
                      .+.+..+...+......|+++++.+.+++|.++++.||..+++  ++....+   ..+.+...+....+++..     ..
T Consensus       140 ~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~  209 (295)
T PRK11689        140 NGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NGITLFF---ILTALALWIKYFLSPQPA-----MV  209 (295)
T ss_pred             ccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC--CchhHHH---HHHHHHHHHHHHHhcCcc-----cc
Confidence            1000000000012345699999999999999999999876544  3333221   222222222222232211     11


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhc
Q 021135          204 HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       204 ~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                      .+++.|..+++.++.+.++++++++++++.+|.+++++.+++|+++++++++++||++++.+++|.++++.|+++.....
T Consensus       210 ~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        210 FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            34456767777677788899999999999999999999999999999999999999999999999999999988776655


Q ss_pred             c
Q 021135          284 K  284 (317)
Q Consensus       284 ~  284 (317)
                      +
T Consensus       290 ~  290 (295)
T PRK11689        290 R  290 (295)
T ss_pred             h
Confidence            4

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.91  E-value=1e-21  Score=180.15  Aligned_cols=222  Identities=13%  Similarity=0.077  Sum_probs=173.5

Q ss_pred             CCchhHHHHHHHHH-HHHHHHHHHhh-hcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccC
Q 021135           46 VAPVYKYCLVSMSN-ILTTTCQYEAL-KYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  123 (317)
Q Consensus        46 ~~~~~~~~~~s~~~-~~~~~~~~~aL-~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~  123 (317)
                      +..++.....|... .....+.+.+. ++++.+...++.++.|+++++++.+ +|||++++++++++++++|+.++..++
T Consensus        65 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~  143 (292)
T PRK11272         65 LRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG  143 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc
Confidence            34566667777664 44567888898 8999999999999999999999986 799999999999999999999875431


Q ss_pred             CCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhh
Q 021135          124 SGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY  203 (317)
Q Consensus       124 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  203 (317)
                         +.       +.+..|+++.+++.+++|.+++..+|..++   ++.....+...++.+...+.....++...    ..
T Consensus       144 ---~~-------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  206 (292)
T PRK11272        144 ---NL-------SGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT----AL  206 (292)
T ss_pred             ---cc-------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc----cc
Confidence               11       234579999999999999999998876432   22344556666666665555433322110    11


Q ss_pred             cchHHHHHHHHHHH-HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhh
Q 021135          204 HHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  282 (317)
Q Consensus       204 ~~~~~~~~il~l~~-~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~  282 (317)
                      .++..|..++++++ .+.+++.++++++++.++.+++++..++|+++.+++++++||++++.+++|.++++.|+++.+..
T Consensus       207 ~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        207 PTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            23456777778776 46788899999999999999999999999999999999999999999999999999999887765


Q ss_pred             ccc
Q 021135          283 KKV  285 (317)
Q Consensus       283 k~~  285 (317)
                      ++|
T Consensus       287 ~~~  289 (292)
T PRK11272        287 KYL  289 (292)
T ss_pred             Hhh
Confidence            553

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.91  E-value=1.2e-21  Score=176.19  Aligned_cols=215  Identities=14%  Similarity=0.082  Sum_probs=175.0

Q ss_pred             CCchhHHHHHHHH-HHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCC
Q 021135           46 VAPVYKYCLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS  124 (317)
Q Consensus        46 ~~~~~~~~~~s~~-~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~  124 (317)
                      +.+++.++..+.. ..+...+.+.|++|++.+...++.++.|+++++++.+++|||++++|+.+++++++|+.++...+ 
T Consensus        43 ~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~-  121 (260)
T TIGR00950        43 LKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG-  121 (260)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC-
Confidence            3456666777665 46667899999999999999999999999999999999999999999999999999999885431 


Q ss_pred             CCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhc
Q 021135          125 GADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH  204 (317)
Q Consensus       125 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  204 (317)
                        +       .+.+..|+.+++++.++++.+++..++..++++.++.....+...++.++..+.....++..      ..
T Consensus       122 --~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~  186 (260)
T TIGR00950       122 --N-------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP------QA  186 (260)
T ss_pred             --c-------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC------Cc
Confidence              1       12456799999999999999999999987766544545444567777777766655443211      11


Q ss_pred             chHHHHHHHHHHH-HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHH
Q 021135          205 HLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL  276 (317)
Q Consensus       205 ~~~~~~~il~l~~-~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi  276 (317)
                      ++..|..+++++. .+.+++.++++++++.++.+++.+.+++|+++.+++++++||++++.+++|.++++.|+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       187 LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            3445666667765 45789999999999999999999999999999999999999999999999999999886

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.90  E-value=1.5e-21  Score=179.40  Aligned_cols=207  Identities=7%  Similarity=0.035  Sum_probs=149.3

Q ss_pred             HHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCC
Q 021135           54 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK  133 (317)
Q Consensus        54 ~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~  133 (317)
                      ..++..+....+.+.|++++|.+...++.++.|+++++++++++|||+++++|++++++++|++++...+      +   
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~------~---  148 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF------G---  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc------C---
Confidence            3334556668899999999999999999999999999999999999999999999999999999986321      0   


Q ss_pred             CCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHH-HHHH
Q 021135          134 GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC-FFDV  212 (317)
Q Consensus       134 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i  212 (317)
                        +..    .+.+++.+++|++.+..||..++...+......+...++.+...+.  .....    ......+.. +..+
T Consensus       149 --~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~  216 (296)
T PRK15430        149 --SLP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI--ADSST----SHMGQNPMSLNLLL  216 (296)
T ss_pred             --Ccc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH--ccCCc----ccccCCcHHHHHHH
Confidence              111    3466678999999988877532111111222223333332221111  11110    001112222 2233


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          213 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       213 l~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      ++.++.+.+++.++++++++.+|.+++++.+++|+++++++++++||++++.+++|+++++.|+.+...
T Consensus       217 ~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        217 IAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            334557789999999999999999999999999999999999999999999999999999877655444

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.88  E-value=6e-20  Score=168.56  Aligned_cols=216  Identities=11%  Similarity=0.066  Sum_probs=163.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCC
Q 021135           47 APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA  126 (317)
Q Consensus        47 ~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~  126 (317)
                      ..++..+..|+.......+.+.+++|+|.+.+.++.++.|+++++++    +||+...  ..+.++++|+.++...+.  
T Consensus        69 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~--  140 (293)
T PRK10532         69 EQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQ--  140 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCC--
Confidence            44566777888777778889999999999999999999999998876    3555444  456677899988753211  


Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcch
Q 021135          127 DLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL  206 (317)
Q Consensus       127 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  206 (317)
                      +.      .+.+.+|+++.+++.+++|.+.+..+|..+++  ++... .+...++.+...+.....+..      ...++
T Consensus       141 ~~------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~  205 (293)
T PRK10532        141 DV------SHVDLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAGE------ALWHW  205 (293)
T ss_pred             Cc------ccCChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccCc------ccCCH
Confidence            11      12356799999999999999999998886654  33343 455566666555554433220      01233


Q ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          207 DCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       207 ~~~~~il~l~~-~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                      ..|..++++++ ++.+++.++++++++.+|.+++++.+++|+++.+++++++||++++.|++|.+++++|+....+.++|
T Consensus       206 ~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        206 SILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            44555567766 46678889999999999999999999999999999999999999999999999999998888766543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.86  E-value=1.9e-20  Score=167.62  Aligned_cols=259  Identities=16%  Similarity=0.156  Sum_probs=204.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHH
Q 021135           17 LKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI   96 (317)
Q Consensus        17 ~~~~~~~~gi~~~~~~~g~~qe~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~   96 (317)
                      .|-++|++++...-.. |+++.+.-   ++...|+++|+++.+++.......+++|+|+|+++++|...|+.+++.+..+
T Consensus        49 ~Q~l~s~~~v~~lk~~-~lv~~~~l---~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf  124 (314)
T KOG1444|consen   49 LQSLASVLVVLVLKRL-GLVNFRPL---DLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLF  124 (314)
T ss_pred             HHHHHHHHHHHHHHHh-ceeecCCc---ChHHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhh
Confidence            4666777777664433 55543221   1345788999999999999999999999999999999999999999999999


Q ss_pred             hccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHH
Q 021135           97 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY  176 (317)
Q Consensus        97 ~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~  176 (317)
                      +|+|+++..|.++....+|.......+    .       ..+..|+.|++...++.+.+.+..|+..+.-+.+.+++++|
T Consensus       125 ~~~~~~~~v~~Sv~~m~~~s~~~~~~d----~-------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~y  193 (314)
T KOG1444|consen  125 FGKRPSNKVWASVFAMIIGSVAAAFTD----L-------SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFY  193 (314)
T ss_pred             cCcCchhhHHHHHHHHHHHHHhhcccc----c-------eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEee
Confidence            999999999999999999987775442    1       35566999999999999999999888776666788999999


Q ss_pred             HHHHHHHHHHHHHHHhCchhHHhHhhh---cchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHH
Q 021135          177 TTLCSCVLSLSGLILEGHLFLAIDFVY---HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLS  253 (317)
Q Consensus       177 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils  253 (317)
                      .|+.+.+.+....+..||+. ...+..   ..+..|..+..-++++..-.++.+++.+..||++.++++...+..+.+..
T Consensus       194 Nnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~  272 (314)
T KOG1444|consen  194 NNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGG  272 (314)
T ss_pred             hhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHH
Confidence            99999998888888888765 222211   12334444444456667777899999999999999999977777788888


Q ss_pred             HHHhcCCCchhhhhhhhHhHhHHHhhhhhccccCCCCC
Q 021135          254 CVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRP  291 (317)
Q Consensus       254 ~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~~~~~  291 (317)
                      .+++|+|+++...+|+.+-+.|=..|++.+.|+++.+|
T Consensus       273 ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  273 LLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            88888999999999999988766666666665554444

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.86  E-value=3.1e-19  Score=162.04  Aligned_cols=277  Identities=14%  Similarity=0.223  Sum_probs=204.9

Q ss_pred             hhhhhcCCchhHHHHHHHHHHHHHHHHH--HHHHHhccCC-CCCCCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHH
Q 021135            5 LITAIGVKDSRVLKMIFAVSGIMTTLVI--YGILQASRKA-IDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLA   81 (317)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~gi~~~~~~--~g~~qe~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll   81 (317)
                      +.....+.+.|..|+.+|..-++.--..  .+..++..++ ...+....+..+.++.|...+-+.|.++.+++++++++.
T Consensus        45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt  124 (345)
T KOG2234|consen   45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQVT  124 (345)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhh
Confidence            4445566777888988887543332111  1111111110 111112456788889999998899999999999999999


Q ss_pred             hhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCC-CCCCCchHHHHHHHHHHHHHhhhhHHHHH
Q 021135           82 KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY-SKGRENTVWGVSLMVGYLGFDGFTSTFQD  160 (317)
Q Consensus        82 ~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~-~~~~~~~~~G~~~~l~a~~~~a~~~v~~~  160 (317)
                      ...+.+.++++..++++||.+++||.++++.++|+.++.....+ ..+++ .....+.+.|....+.+.+.+++.+++.|
T Consensus       125 ~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~-~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfE  203 (345)
T KOG2234|consen  125 YQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS-PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFE  203 (345)
T ss_pred             hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC-CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999732111 11111 11235678899999999999999999999


Q ss_pred             HHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhC-chhHHhHhhhcch-HHHHHHHHHHHHHHHHHHHHHHHHHhhChHHH
Q 021135          161 KLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEG-HLFLAIDFVYHHL-DCFFDVALLSTVATTSQFFISYTIRTFGALTF  238 (317)
Q Consensus       161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~-~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~  238 (317)
                      |++|+-+.+.|........++.++.+......+ +-.....+...+. ..|..    .+..++|.+++...+|+.+...-
T Consensus       204 kiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~v----Vl~~a~gGLlvs~v~KyADnIlK  279 (345)
T KOG2234|consen  204 KILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLV----VLLNAVGGLLVSLVMKYADNILK  279 (345)
T ss_pred             HHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHH----HHHHhccchhHHHHHHHhHHHHH
Confidence            999887888888888888899888877765432 2111122222222 22322    23456777788888888888888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcccc
Q 021135          239 ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  286 (317)
Q Consensus       239 si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~  286 (317)
                      +....+-.+++.+.|+.+||.++|....+|+.+|+.++..|...+.+.
T Consensus       280 ~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  280 GFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            888888899999999999999999999999999999999998666655

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.85  E-value=1.3e-19  Score=165.26  Aligned_cols=210  Identities=12%  Similarity=0.116  Sum_probs=153.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCC
Q 021135           52 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY  131 (317)
Q Consensus        52 ~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  131 (317)
                      .+..++.......+.+.++++.+.+...++.++.|+++++++++++|||+++++|++++++++|+.++...+    .+  
T Consensus        66 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~----~~--  139 (281)
T TIGR03340        66 LAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSR----FA--  139 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccc----cc--
Confidence            344444566678899999999999999999999999999999999999999999999999999999886431    11  


Q ss_pred             CCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHH-HHHHHH---hCchhHHhHhhhcchH
Q 021135          132 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLS-LSGLIL---EGHLFLAIDFVYHHLD  207 (317)
Q Consensus       132 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~g~~~~~~~~~~~~~~  207 (317)
                          ..+..|+.+.+++.++++.+.+..|+..++.+. ......+ ..++.+.. .+....   .++.     .....+.
T Consensus       140 ----~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  208 (281)
T TIGR03340       140 ----QHRRKAYAWALAAALGTAIYSLSDKAAALGVPA-FYSALGY-LGIGFLAMGWPFLLLYLKRHGR-----SMFPYAR  208 (281)
T ss_pred             ----ccchhHHHHHHHHHHHHHHhhhhccccccchhc-ccccHHH-HHHHHHHHHHHHHHHHHHHhcc-----chhhhHH
Confidence                123358888889999999999877654322211 1111111 22222222 222211   1110     0001122


Q ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHh
Q 021135          208 CFFDVALL-STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  278 (317)
Q Consensus       208 ~~~~il~l-~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~  278 (317)
                      .+..+++. ++.+.+++.++++++++.++.+++...+++|+++.+++++++||++++.+++|.++++.|+++
T Consensus       209 ~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       209 QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            33344455 456778999999999999999999999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.85  E-value=2.2e-19  Score=159.99  Aligned_cols=221  Identities=16%  Similarity=0.272  Sum_probs=175.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCC
Q 021135           48 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGAD  127 (317)
Q Consensus        48 ~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~  127 (317)
                      ...++.+.+++|...+.+.+.++++++++++++++.++.+++++++++++|||.+++||+++++.++|+.++..++...+
T Consensus        16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~   95 (244)
T PF04142_consen   16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS   95 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence            46678899999999999999999999999999999999999999999999999999999999999999999876543211


Q ss_pred             CCCCCC------CCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHh-CchhHHhH
Q 021135          128 LSPYSK------GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE-GHLFLAID  200 (317)
Q Consensus       128 ~~~~~~------~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~  200 (317)
                      .+....      .......|+++++.+.++.|+.+++.||++|+.+.+.+........++.++.++..... ++......
T Consensus        96 ~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g  175 (244)
T PF04142_consen   96 DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESG  175 (244)
T ss_pred             ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCC
Confidence            010000      12345689999999999999999999999998887888888888889988887765432 21111111


Q ss_pred             hhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHh
Q 021135          201 FVYH-HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV  272 (317)
Q Consensus       201 ~~~~-~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv  272 (317)
                      +.+. ++..|.    ..+..+++.+.....+|+.+...-+....+..+++.++++++||.++|....+|..+|
T Consensus       176 ~f~G~~~~~~~----~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  176 FFHGYSWWVWI----VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             chhhcchHHHH----HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            1111 112222    2335667778888899999999999999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.80  E-value=1e-16  Score=145.40  Aligned_cols=217  Identities=17%  Similarity=0.148  Sum_probs=162.5

Q ss_pred             chhHHHHHH-HHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHH-HHhccccchhHHHHHHHHHHhHHHhhccCCC
Q 021135           48 PVYKYCLVS-MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT-LIMQKRYKGYDYFLALLVTLGCSIFILFPSG  125 (317)
Q Consensus        48 ~~~~~~~~s-~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~-l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~  125 (317)
                      +++.....+ +.......+.+.++++++.+..+++.++.|+++.++++ +++|||++++++.++++.++|+.++...+. 
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~-  146 (292)
T COG0697          68 PWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG-  146 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC-
Confidence            333444444 45566678999999999999999999999999999997 777999999999999999999999975421 


Q ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHH-HHHHHHHHHHHHHHHHhCchhHHhHhhhc
Q 021135          126 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIF-YTTLCSCVLSLSGLILEGHLFLAIDFVYH  204 (317)
Q Consensus       126 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  204 (317)
                         ...   .. ...|+.+.+.+.+++|++.+..+++. +  .++..... +..........+.......       ...
T Consensus       147 ---~~~---~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  209 (292)
T COG0697         147 ---GGG---IL-SLLGLLLALAAALLWALYTALVKRLS-R--LGPVTLALLLQLLLALLLLLLFFLSGFG-------API  209 (292)
T ss_pred             ---cch---hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHHhcccc-------ccC
Confidence               100   01 46899999999999999999998876 3  23333333 2222111111111111100       112


Q ss_pred             chHHHHHHHHHHHHHH-HHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhh
Q 021135          205 HLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  282 (317)
Q Consensus       205 ~~~~~~~il~l~~~~~-~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~  282 (317)
                      ....|..+.+.++.+. +++.++++++++.++...+++..++|++++++++++++|+++..+++|+++++.|+.+....
T Consensus       210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            2345666666666544 79999999999999999999999999999999999999999999999999999999887766

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.80  E-value=1.6e-18  Score=153.53  Aligned_cols=232  Identities=15%  Similarity=0.201  Sum_probs=185.7

Q ss_pred             CCCCCCCchhHHH----HHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhH
Q 021135           41 KAIDPVAPVYKYC----LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGC  116 (317)
Q Consensus        41 ~~~~~~~~~~~~~----~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv  116 (317)
                      +|.+.+..|+.|+    +.++...+-..++|.|++|++.+.+++.|++.++++.+++.++.=||+++.-.+.++++.+|+
T Consensus        72 ~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Gl  151 (349)
T KOG1443|consen   72 PRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGL  151 (349)
T ss_pred             CccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhe
Confidence            3333456677666    888888888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCC---CCHHHHHHHHHHHHHHHHHHH-HHHh
Q 021135          117 SIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD---MEIHNQIFYTTLCSCVLSLSG-LILE  192 (317)
Q Consensus       117 ~l~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~  192 (317)
                      ++++..+           .+.+..|..++..|.++.|+.-.+.+++.++.+   .+|.+.+++..++..+..+|. +..+
T Consensus       152 flft~Ks-----------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fE  220 (349)
T KOG1443|consen  152 FLFTYKS-----------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFE  220 (349)
T ss_pred             eEEEecc-----------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHc
Confidence            9998762           146788999999999999999888888887764   588899999888888877775 4556


Q ss_pred             Cchh----HHhHhhhcchHHHHHHHHHHHHHHHHH---HHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhh
Q 021135          193 GHLF----LAIDFVYHHLDCFFDVALLSTVATTSQ---FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQ  265 (317)
Q Consensus       193 g~~~----~~~~~~~~~~~~~~~il~l~~~~~~g~---~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~  265 (317)
                      |...    +.+++. .+...+..+..++.++..+.   .+-+..+.+.+..+.++.+..+-+.+.+++.++.++.++..+
T Consensus       221 G~~~~~~s~~f~~~-d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN  299 (349)
T KOG1443|consen  221 GLHLITSSSIFRFQ-DTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLN  299 (349)
T ss_pred             ccccchhhhHHHhc-CccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhH
Confidence            5321    222221 11234555555555554444   344556799999999999999999999999999999999999


Q ss_pred             hhhhhHhHhHHHhhhhhcc
Q 021135          266 CIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       266 ~~G~~lv~~Gi~~~~~~k~  284 (317)
                      |.|..+...|+.++..+++
T Consensus       300 ~~Gl~i~~agi~~~~~~~~  318 (349)
T KOG1443|consen  300 WLGLAICLAGILLHRNEPQ  318 (349)
T ss_pred             HHHHHHHHHHHHHhccCcc
Confidence            9999999999999855433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.79  E-value=3.7e-20  Score=160.87  Aligned_cols=230  Identities=15%  Similarity=0.137  Sum_probs=181.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCC--CC
Q 021135           49 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS--GA  126 (317)
Q Consensus        49 ~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~--~~  126 (317)
                      .+.+++++++.+.+....|+|++|.|.+-++++..+.|.++.+++|.++|||++..+.++..+.+.||+++...+=  +.
T Consensus        97 R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~  176 (346)
T KOG4510|consen   97 RKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGD  176 (346)
T ss_pred             EEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCC
Confidence            3456788999999999999999999999999999999999999999999999999999999999999999865320  00


Q ss_pred             CCCCCC-CCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcc
Q 021135          127 DLSPYS-KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHH  205 (317)
Q Consensus       127 ~~~~~~-~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  205 (317)
                      +.+..+ +..+.+..|-..++.+++.-|-..+..+++-|+  .|..-.+-|..+++.+..++.+..-|++.     ++..
T Consensus       177 ~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~~-----lP~c  249 (346)
T KOG4510|consen  177 TTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAVQ-----LPHC  249 (346)
T ss_pred             CccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhcccee-----cCcc
Confidence            111111 112445678887888877777777777777554  34445567888888888887764444321     1123


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          206 LDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       206 ~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                      ...|+..+.+++++.++|++...++++--|...++..++.-+++.++.+++|||.+|++.|.|+++++...++....|..
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa  329 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA  329 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence            34566666679999999999999999999999999999999999999999999999999999999999887766655543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.78  E-value=4.9e-17  Score=142.37  Aligned_cols=267  Identities=16%  Similarity=0.162  Sum_probs=197.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhcc--CCC---------CCCCchh--HHHHHHHHHHHHHHHHHHhhhcCChhHH
Q 021135           12 KDSRVLKMIFAVSGIMTTLVIYGILQASR--KAI---------DPVAPVY--KYCLVSMSNILTTTCQYEALKYVSFPVQ   78 (317)
Q Consensus        12 ~~~~~~~~~~~~~gi~~~~~~~g~~qe~~--~~~---------~~~~~~~--~~~~~s~~~~~~~~~~~~aL~~~s~~~~   78 (317)
                      ..+|.+|-+...+|-|.|+..|..+..+.  +..         ..+-|++  .+++.+++..++..+.|.+|.+++++.+
T Consensus        36 fqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsf  115 (372)
T KOG3912|consen   36 FQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASSF  115 (372)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHHH
Confidence            56788999999999999999988775421  100         0112444  3566889999999999999999999999


Q ss_pred             HHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHH
Q 021135           79 TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTF  158 (317)
Q Consensus        79 ~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~  158 (317)
                      +++|....++|.+++..+++++++.+||+++..+..|++++...|...+..+. .+.++...|+++++.+.+.-|...++
T Consensus       116 QMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~-~d~s~iitGdllIiiaqiivaiQ~v~  194 (372)
T KOG3912|consen  116 QMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY-TDYSSIITGDLLIIIAQIIVAIQMVC  194 (372)
T ss_pred             HHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc-cccccchhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998655321111111 11245567999999999999999999


Q ss_pred             HHHHHccCCCCHHHHHHHHHHHHHHHHHH----HHHH-hCc---------hh---HHhHhhhcchHHHHHHHHHHHHHHH
Q 021135          159 QDKLFKGYDMEIHNQIFYTTLCSCVLSLS----GLIL-EGH---------LF---LAIDFVYHHLDCFFDVALLSTVATT  221 (317)
Q Consensus       159 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~g~---------~~---~~~~~~~~~~~~~~~il~l~~~~~~  221 (317)
                      .||..++++++|.+...|..+++.++...    ...+ .++         +.   +.+.-...+|....  ...+....+
T Consensus       195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~v--al~~~~vSi  272 (372)
T KOG3912|consen  195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAV--ALIGFTVSI  272 (372)
T ss_pred             HHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHH--HHhhhhhhe
Confidence            99999999999999999999888554322    2111 221         11   11111222232221  111221112


Q ss_pred             HH--HHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          222 SQ--FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       222 g~--~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      +.  ..-.+..|..++++-.+.-.+|..+-.++++....|.+...|+.|.++.+.|+..|+-
T Consensus       273 AffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  273 AFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             eeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21  1222346899999999999999999999999999999999999999999999876654

>TIGR00803 nst UDP-galactose transporter

Probab=99.75  E-value=1.3e-17  Score=146.97  Aligned_cols=204  Identities=19%  Similarity=0.212  Sum_probs=147.1

Q ss_pred             CChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCC-------------CCCCC---CCCCC
Q 021135           73 VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA-------------DLSPY---SKGRE  136 (317)
Q Consensus        73 ~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~-------------~~~~~---~~~~~  136 (317)
                      +++|.++++|+++++++|+.++...+||++..|+++.++...|+......+.+.             +.+..   ....+
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            578999999999999999999999999999999999999999988643321100             00000   00114


Q ss_pred             chHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHH-hCchhHHhHhhhcchHHHHHHHHH
Q 021135          137 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL-EGHLFLAIDFVYHHLDCFFDVALL  215 (317)
Q Consensus       137 ~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~il~l  215 (317)
                      ..+.|..+.+.+.+++++.++++|+.+|+++...+..++....++.+........ .++......+...+|...+.   +
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  158 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWI---V  158 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHH---H
Confidence            5678999999999999999999999877554443444444444444432222222 12222222222233333222   2


Q ss_pred             HHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhh
Q 021135          216 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  279 (317)
Q Consensus       216 ~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~  279 (317)
                      .+.++.++.++.+++|+.++.+.++++++|++++.++|+++|||++++.+|+|+.+++.|+++|
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            4557788899999999999999999999999999999999999999999999999999987653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.75  E-value=2.6e-17  Score=139.75  Aligned_cols=262  Identities=13%  Similarity=0.155  Sum_probs=189.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHH
Q 021135           17 LKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI   96 (317)
Q Consensus        17 ~~~~~~~~gi~~~~~~~g~~qe~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~   96 (317)
                      .|-+.|+.|+.+--. .|+.. .|     ....++|+++++..+...+....+|+|+++|.++++|....+.++..+..+
T Consensus        43 vQSlvcvv~l~iLk~-l~~~~-fR-----~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~  115 (309)
T COG5070          43 VQSLVCVVGLLILKF-LRLVE-FR-----LTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLF  115 (309)
T ss_pred             HHHHHHHHHHHHHHH-HhHhh-ee-----hhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHH
Confidence            455566666655222 24432 11     245778899999999888999999999999999999999999999999999


Q ss_pred             hccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHH
Q 021135           97 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY  176 (317)
Q Consensus        97 ~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~  176 (317)
                      +|+|.+..+..+-++.++.-+...++|.    +...-....-..|++|+....+..+.+....++..+-.+...++-|+|
T Consensus       116 Fgg~vtsl~l~SFilMvlSS~va~w~D~----q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfY  191 (309)
T COG5070         116 FGGRVTSLELLSFILMVLSSVVATWGDQ----QASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFY  191 (309)
T ss_pred             hcCccchhhHHHHHHHHHHHHHhccchh----hHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHH
Confidence            9999999999999999998888877642    110000012234999998888887777666555443334456788999


Q ss_pred             HHHHHHHHHHHHHHHhCchhHHhHhhh-cchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHH
Q 021135          177 TTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV  255 (317)
Q Consensus       177 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l  255 (317)
                      .|+.+.++.+...+...+..+. +... ..+.....+..-++++..-.++-.++++..++++.++++.+.+.-..+.+.+
T Consensus       192 nNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlv  270 (309)
T COG5070         192 NNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLV  270 (309)
T ss_pred             hhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhh
Confidence            9999999887775554443221 1111 2234444444446666666677778999999999999999999999999999


Q ss_pred             HhcCCCchhhhhhhhHhHhHHHhhhhhccccCCCC
Q 021135          256 WFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPR  290 (317)
Q Consensus       256 ~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~~~~  290 (317)
                      +||+|.+...+..+.+-+..=.+|.+.|.+|++++
T Consensus       271 ffdap~nf~si~sillGflsg~iYavaks~k~q~q  305 (309)
T COG5070         271 FFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQ  305 (309)
T ss_pred             hcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999997754344555555444433

>TIGR00688 rarD rarD protein

Probab=99.74  E-value=1.1e-15  Score=137.56  Aligned_cols=183  Identities=9%  Similarity=0.012  Sum_probs=133.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCC
Q 021135           51 KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP  130 (317)
Q Consensus        51 ~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  130 (317)
                      .+...++.......+.+.|++|++.+.++++.++.|+++++++++++|||++++++++++++++|++++...+     . 
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~-----~-  145 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK-----G-  145 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc-----C-
Confidence            3566677777778999999999999999999999999999999999999999999999999999999875431     0 


Q ss_pred             CCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcch-HHH
Q 021135          131 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL-DCF  209 (317)
Q Consensus       131 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~  209 (317)
                           +..    .+++++.+++|.+.+..||..++   +..+... ......+...+.....+.. .   ....++ ..|
T Consensus       146 -----~~~----~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~  208 (256)
T TIGR00688       146 -----SLP----WEALVLAFSFTAYGLIRKALKNT---DLAGFCL-ETLSLMPVAIYYLLQTDFA-T---VQQTNPFPIW  208 (256)
T ss_pred             -----Cch----HHHHHHHHHHHHHHHHHhhcCCC---CcchHHH-HHHHHHHHHHHHHHHhccC-c---ccccCchhHH
Confidence                 111    24567889999999998876432   2222221 1122222222211111110 0   001122 356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHH
Q 021135          210 FDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW  256 (317)
Q Consensus       210 ~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~  256 (317)
                      ..++++++++.+++.++++++|+.+|.+++++.+++|+++.++++++
T Consensus       209 ~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       209 LLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            66777777788999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.68  E-value=2e-14  Score=131.77  Aligned_cols=210  Identities=10%  Similarity=0.107  Sum_probs=154.1

Q ss_pred             HHHHHHHHHHHHHhhhcCChhHHHHHhh-cchHHHHHHHHHHhccccchhH----HHHHHHHHHhHHHhhccCCCCCCCC
Q 021135           56 SMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQKRYKGYD----YFLALLVTLGCSIFILFPSGADLSP  130 (317)
Q Consensus        56 s~~~~~~~~~~~~aL~~~s~~~~~ll~s-~~pi~v~i~~~l~~k~~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~  130 (317)
                      |+....++.+.+.|.++++++.+..+.+ ..++++++++.+++|||.++++    +++++++++|++++...+.+ +.+ 
T Consensus        66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~-~~~-  143 (290)
T TIGR00776        66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDK-SAG-  143 (290)
T ss_pred             HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccc-ccc-
Confidence            3446667799999999999999877777 7888999999999999999999    99999999999888654211 110 


Q ss_pred             CCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHH----HHHHHHHHHHHHhCchhHHhHhhhcch
Q 021135          131 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTL----CSCVLSLSGLILEGHLFLAIDFVYHHL  206 (317)
Q Consensus       131 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~  206 (317)
                       .++..+...|+++.+++.++++.+.+..++.  +  .++++..+.+..    .+.++..+.   ...  ..  .  ...
T Consensus       144 -~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~--~~~~~~~~~~~~g~~~~~~~~~~~~---~~~--~~--~--~~~  209 (290)
T TIGR00776       144 -IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--G--VDGLSVLLPQAIGMVIGGIIFNLGH---ILA--KP--L--KKY  209 (290)
T ss_pred             -cccccchhhHHHHHHHHHHHHHHHHHHHHHc--C--CCcceehhHHHHHHHHHHHHHHHHH---hcc--cc--h--HHH
Confidence             0000223569999999999999999888754  2  355555333322    222222111   000  00  0  111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-hhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhh----hhhhHhHhHHHhhhh
Q 021135          207 DCFFDVALLSTVATTSQFFISYTIR-TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYTRSF  281 (317)
Q Consensus       207 ~~~~~il~l~~~~~~g~~~~~~~l~-~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~----~G~~lv~~Gi~~~~~  281 (317)
                      ..|..++ .++...+++.+++...+ +.++.+++++.+.+|+.+.+++++++||+.++.|+    +|.++++.|+.+...
T Consensus       210 ~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       210 AILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            2333333 56666788888888888 99999999999999999999999999999999999    999999999887655


Q ss_pred             h
Q 021135          282 F  282 (317)
Q Consensus       282 ~  282 (317)
                      .
T Consensus       289 ~  289 (290)
T TIGR00776       289 G  289 (290)
T ss_pred             c
Confidence            4

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.67  E-value=3.7e-17  Score=142.74  Aligned_cols=232  Identities=16%  Similarity=0.163  Sum_probs=186.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCC
Q 021135           49 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADL  128 (317)
Q Consensus        49 ~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  128 (317)
                      .++..+.++.+.+...+.|+.|+|++++.+.+-|+...+|+.++.++++|+|-+..-..++.++++|-.+=.      |.
T Consensus       102 ~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv------dq  175 (347)
T KOG1442|consen  102 ARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV------DQ  175 (347)
T ss_pred             HHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecc------cc
Confidence            467899999999999999999999999999999999999999999999999999999999998888843321      11


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhc-chH
Q 021135          129 SPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH-HLD  207 (317)
Q Consensus       129 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~  207 (317)
                      ++.  .+..++.|.++...|.++-|+..++.+|.....+...|.+.+|+|..++++.+|.+.+.|++.+.+.+.+. ...
T Consensus       176 E~~--~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~  253 (347)
T KOG1442|consen  176 EGS--TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIK  253 (347)
T ss_pred             ccc--cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHH
Confidence            111  13567889999999999999999998877665666789999999999999999999999998776665332 222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccccC
Q 021135          208 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  287 (317)
Q Consensus       208 ~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~  287 (317)
                      .|..+.+-++++..-.+.-.+-+|..+|.|..+-++.|-....++++.+++|.-+..-|-|-.++++|-..|.+.|+++.
T Consensus       254 Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em  333 (347)
T KOG1442|consen  254 FWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEM  333 (347)
T ss_pred             HHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHH
Confidence            33322222334332222223348999999999999999999999999999999999999999999999888888776554


Q ss_pred             C
Q 021135          288 K  288 (317)
Q Consensus       288 ~  288 (317)
                      +
T Consensus       334 ~  334 (347)
T KOG1442|consen  334 R  334 (347)
T ss_pred             H
Confidence            3

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=1.6e-15  Score=137.93  Aligned_cols=224  Identities=12%  Similarity=0.052  Sum_probs=172.9

Q ss_pred             HHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCCCCCCC
Q 021135           57 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRE  136 (317)
Q Consensus        57 ~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  136 (317)
                      ...+.++...|.||.|++++..+++.++.-+|+..++.++..+|+++.|.+++++.+.||++++.+++.  .. ++....
T Consensus       167 ~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~--~~-~~~~a~  243 (416)
T KOG2765|consen  167 PLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSK--QN-SDLPAS  243 (416)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccc--cc-ccCCcc
Confidence            345677889999999999999999999999999999999999999999999999999999999877531  11 111235


Q ss_pred             chHHHHHHHHHHHHHhhhhHHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHHHHhC-chhHHhHhhhcchHHHHHHH
Q 021135          137 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGY--DMEIHNQIFYTTLCSCVLSLSGLILEG-HLFLAIDFVYHHLDCFFDVA  213 (317)
Q Consensus       137 ~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~il  213 (317)
                      ....|.++++++++.||+|.++.+|-..+.  +++.....-|..++..++..|.+++-. -..+.++.  .+......++
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~l--P~~~q~~~vv  321 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFEL--PSSTQFSLVV  321 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccC--CCCceeEeee
Confidence            668899999999999999999988765555  345444445677788777776543211 11111111  1111122233


Q ss_pred             HHH-HHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          214 LLS-TVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       214 ~l~-~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                      ..+ +.+.+.-++|..+.--.+|+++++-+++....+++.+.++-++++|+.+++|...|++|.+..++..+.
T Consensus       322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            333 345677799999999999999999999999999999999999999999999999999998887776543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.61  E-value=3.5e-14  Score=117.51  Aligned_cols=141  Identities=20%  Similarity=0.294  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHh--hhc-----chHH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKG-----YDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDF--VYH-----HLDC  208 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~-----~~~~  208 (317)
                      |+++++.|.++.|++.++.|++.++     .+.++.++++|+++.++++.+|..+..++.......  ...     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999887     578999999999999999999876554432211111  111     2234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          209 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       209 ~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      +..++..++.+...+++.+.++++.+|++.++.+++|.++.+++|+++|||++|+.+++|+++.+.|.+.|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            4444444666777888999999999999999999999999999999999999999999999999999988764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.57  E-value=3.4e-16  Score=135.47  Aligned_cols=224  Identities=17%  Similarity=0.190  Sum_probs=171.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCC
Q 021135           46 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  125 (317)
Q Consensus        46 ~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~  125 (317)
                      +..|+.|++.++..+-++++--.|.||++....+++.+-..+.+++++|+++|.||.+.|+.+++++.+|++++...|..
T Consensus        75 ~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~  154 (336)
T KOG2766|consen   75 KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH  154 (336)
T ss_pred             HHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence            35688899999888888888889999999999999999999999999999999999999999999999999998776431


Q ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcc
Q 021135          126 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHH  205 (317)
Q Consensus       126 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  205 (317)
                      .   .+..++++...|+.+++.++-++|+.++.+|.+.||  .+..++|....+++++++.+-.+.+..-..   .  .+
T Consensus       155 a---gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn--~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~---t--l~  224 (336)
T KOG2766|consen  155 A---GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN--ADRVELMGFLGLFGAIISAIQFIFERHHVS---T--LH  224 (336)
T ss_pred             c---ccccCCCCCccCcEEEEecceeeeeccccHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHhhhcccee---e--Ee
Confidence            1   111234566789999999999999999999999884  578899999999999988775433321100   0  11


Q ss_pred             hHHHHHHHHHHHHHHHHHH----HHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          206 LDCFFDVALLSTVATTSQF----FISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       206 ~~~~~~il~l~~~~~~g~~----~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      + .|-...++.  .++...    +.-..+|..|++..++-..+....++++  -.||-+.+|...+..+.+..|++++..
T Consensus       225 w-~~~i~~yl~--f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  225 W-DSAIFLYLR--FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             e-hHHHHHHHH--HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            1 122222222  222222    2222568899999998888889999888  789999999999999999999888755


Q ss_pred             hcc
Q 021135          282 FKK  284 (317)
Q Consensus       282 ~k~  284 (317)
                      ..+
T Consensus       300 re~  302 (336)
T KOG2766|consen  300 REK  302 (336)
T ss_pred             ccc
Confidence            433

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.57  E-value=2.7e-12  Score=111.47  Aligned_cols=218  Identities=11%  Similarity=0.069  Sum_probs=161.9

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCC
Q 021135           46 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  125 (317)
Q Consensus        46 ~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~  125 (317)
                      +..|+..+..|.+....+.+.|.|++.+|.++++-+.++-|+.+.+++    .||  .++.+-+.+.+.|+.+...... 
T Consensus        68 ~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~-  140 (292)
T COG5006          68 KPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQ-  140 (292)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccC-
Confidence            456778889999999899999999999999999999999998887764    344  3455556667888887754321 


Q ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcc
Q 021135          126 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHH  205 (317)
Q Consensus       126 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  205 (317)
                       +.      ...+..|..+++.+..||+.|-+..+|.-+.  .+.-.-+..-..++.++.+|.-+...+.    .+  .+
T Consensus       141 -~~------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~~g~a~gm~vAaviv~Pig~~~ag~----~l--~~  205 (292)
T COG5006         141 -SV------WSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGTAGVAVGMLVAALIVLPIGAAQAGP----AL--FS  205 (292)
T ss_pred             -Cc------CcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCchHHHHHHHHHHHHHhhhhhhhcch----hh--cC
Confidence             11      2567899999999999999999998887531  2222334455567777777764432221    11  34


Q ss_pred             hHHHHHHHHHHH-HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcc
Q 021135          206 LDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       206 ~~~~~~il~l~~-~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~  284 (317)
                      |.....-+..++ .+++-+.+=..++++.++.++++...++|.++.+.+++++||.+|+.||+|+++|+.+..-..+..|
T Consensus       206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            555444444454 3556776777789999999999999999999999999999999999999999999987765554444


Q ss_pred             c
Q 021135          285 V  285 (317)
Q Consensus       285 ~  285 (317)
                      |
T Consensus       286 ~  286 (292)
T COG5006         286 K  286 (292)
T ss_pred             C
Confidence            3

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.55  E-value=3.6e-12  Score=113.22  Aligned_cols=212  Identities=13%  Similarity=0.083  Sum_probs=155.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCCC
Q 021135           52 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY  131 (317)
Q Consensus        52 ~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  131 (317)
                      +...++.-..+.+....|.++-..-.+.+-....|++.++++.+++|||+++-||++++++.+||..-....        
T Consensus        75 ~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~--------  146 (293)
T COG2962          75 LALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL--------  146 (293)
T ss_pred             HHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--------
Confidence            333444444445566677777565567788889999999999999999999999999999999999887641        


Q ss_pred             CCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhh-cchHHHH
Q 021135          132 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFF  210 (317)
Q Consensus       132 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~  210 (317)
                         ++..+..+.++    +.+++|...-    |+.+.++.+-+..-..+-.+..+...+..++-.+   +.. .++..+.
T Consensus       147 ---g~lpwval~la----~sf~~Ygl~R----K~~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~  212 (293)
T COG2962         147 ---GSLPWVALALA----LSFGLYGLLR----KKLKVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWL  212 (293)
T ss_pred             ---CCCcHHHHHHH----HHHHHHHHHH----HhcCCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHH
Confidence               13455555544    4567777554    3345566555554444444444444332221111   222 3455666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          211 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       211 ~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                      .+...|..+++.-.++..+-|+.+=.+.++..+.+|..-.+++++++||+++..+.+..+++-.|+.++..+.-+
T Consensus       213 LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~  287 (293)
T COG2962         213 LLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY  287 (293)
T ss_pred             HHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666668888999889999999999999999999999999999999999999999999999999999888776543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.16  E-value=4.8e-10  Score=88.73  Aligned_cols=124  Identities=18%  Similarity=0.227  Sum_probs=96.9

Q ss_pred             HHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHH-HHHHHHHHHH
Q 021135          150 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISY  228 (317)
Q Consensus       150 ~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~-~~~g~~~~~~  228 (317)
                      +++|.+.+..++..++  .++....++....+.+ .++.....+...    ....++..+...++.+.. +.+++.++++
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            3678888888888775  5788888888888876 444443322211    112334455556666654 6889999999


Q ss_pred             HHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          229 TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       229 ~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      ++++.++..++++..++|+++.++++++++|++++.+++|+.+++.|+++..
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999987654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.15  E-value=2.1e-10  Score=89.78  Aligned_cols=134  Identities=14%  Similarity=0.132  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHH
Q 021135          142 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  221 (317)
Q Consensus       142 ~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~  221 (317)
                      .++++++++++++..++.|.-.+  +.||.-..+--+.....+....++..|+.+..-+   .++..|..+..-++.+..
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~---~~~k~~lflilSGla~gl   79 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE---IGPKSWLFLILSGLAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc---cCcceehhhhHHHHHHHH
Confidence            46778899999999888765555  3455555555666666666666667776433211   245667766666777888


Q ss_pred             HHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          222 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       222 g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      +-+++|+++++-.+.....+.-+.+++++++|++++||++|..+|+|+++|.+|..+..
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            88999999999999999999999999999999999999999999999999999976543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.97  E-value=3.3e-07  Score=82.12  Aligned_cols=249  Identities=10%  Similarity=0.086  Sum_probs=162.5

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCC-CCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHH-HHhhcchHH
Q 021135           11 VKDSRVLKMIFAVSGIMTTLVIYGILQASRKAIDP-VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQT-LAKCAKMIP   88 (317)
Q Consensus        11 ~~~~~~~~~~~~~~gi~~~~~~~g~~qe~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~-ll~s~~pi~   88 (317)
                      +..+|..|.+-...|-...-+....+  .+..... ...+..-++.|++...+...++.|.+++.++..+ +-.....+.
T Consensus         8 ~gG~~~~Q~lG~t~Gali~alv~~~~--~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg   85 (269)
T PF06800_consen    8 IGGKPANQILGTTIGALIFALVVFLF--RQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVG   85 (269)
T ss_pred             eCCcHHHHHHHHHHHHHHHHHHHHHH--hCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence            34566777766666655543333333  1111110 1233444666778888899999999987766442 333455677


Q ss_pred             HHHHHHHHhccccchhHHH----HHHHHHHhHHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHc
Q 021135           89 VMIWGTLIMQKRYKGYDYF----LALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK  164 (317)
Q Consensus        89 v~i~~~l~~k~~~~~~~~~----~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~  164 (317)
                      +.+++.++++|.-+.++++    +++++++|+.+-...+.+++   +.++..+..-|+..++++.+.+..|.+..+.   
T Consensus        86 ~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~---~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~---  159 (269)
T PF06800_consen   86 TSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD---KSSSKSNMKKGILALLISTIGYWIYSVIPKA---  159 (269)
T ss_pred             HHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc---ccccccchhhHHHHHHHHHHHHHHHHHHHHh---
Confidence            8899999999999888765    88889999988876642111   1111234556999999999999999887643   


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHH-HHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHH
Q 021135          165 GYDMEIHNQIFYTTLCSCVLSLS-GLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMT  243 (317)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~  243 (317)
                       .+.++++..+-+. ++.++... .......     .+  .+...|..+ .-++.=.+|+++++.+.++.+..+.=.++.
T Consensus       160 -~~~~~~~~~lPqa-iGm~i~a~i~~~~~~~-----~~--~~k~~~~ni-l~G~~w~ignl~~~is~~~~G~a~af~lSQ  229 (269)
T PF06800_consen  160 -FHVSGWSAFLPQA-IGMLIGAFIFNLFSKK-----PF--FEKKSWKNI-LTGLIWGIGNLFYLISAQKNGVATAFTLSQ  229 (269)
T ss_pred             -cCCChhHhHHHHH-HHHHHHHHHHhhcccc-----cc--cccchHHhh-HHHHHHHHHHHHHHHhHHhccchhhhhHHh
Confidence             2467777665443 33333322 2222211     01  122344433 224445678888889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCchhh----hhhhhHhHhHHH
Q 021135          244 TRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGALY  277 (317)
Q Consensus       244 ~~~v~aiils~l~f~e~~t~~~----~~G~~lv~~Gi~  277 (317)
                      +..+++.+.++++++|+=+..+    ++|.++++.|..
T Consensus       230 ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  230 LGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            9999999999999999888664    567777776643

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.90  E-value=1.6e-07  Score=86.38  Aligned_cols=140  Identities=11%  Similarity=0.111  Sum_probs=104.9

Q ss_pred             chHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHH
Q 021135          137 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLS  216 (317)
Q Consensus       137 ~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~  216 (317)
                      +...|.++++++.++++...+..+.. .  +.++.+..++...++.++.++.....++.....+. ..++..+...+.-+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHHH
Confidence            45679999999999999999888543 3  46899999999999988766665444332111110 11233322222213


Q ss_pred             HHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          217 TVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       217 ~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      +.....+.++++++++.++..++++..+.|+++.++++++++|+++..+|+|+++.+.|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            3445667899999999999999999999999999999999999999999999999999977543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.88  E-value=6.3e-09  Score=87.52  Aligned_cols=223  Identities=11%  Similarity=0.097  Sum_probs=154.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCC
Q 021135           50 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLS  129 (317)
Q Consensus        50 ~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~  129 (317)
                      ++..+.+++..++++.+-.+|+.++.+.++-+.+|.--++.+++++++|.|+...++++.++...|++++.+.|+  +  
T Consensus        54 ~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN--~--  129 (290)
T KOG4314|consen   54 IRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN--E--  129 (290)
T ss_pred             eeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc--h--
Confidence            344566677788899999999999999999999999999999999999999999999999999999999876632  1  


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCC-CHHHHHHHHHHHHHH-HHHHHHH--HhCchhHHhHhhhcc
Q 021135          130 PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM-EIHNQIFYTTLCSCV-LSLSGLI--LEGHLFLAIDFVYHH  205 (317)
Q Consensus       130 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~--~~g~~~~~~~~~~~~  205 (317)
                           -...+.|+.++..++++.|+|-+..++...+.+. +.-..|-....+..+ ...|.++  +++  .+.++.....
T Consensus       130 -----~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~--VE~~qsFA~~  202 (290)
T KOG4314|consen  130 -----HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTG--VEHLQSFAAA  202 (290)
T ss_pred             -----hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc--hHHHHHHhhC
Confidence                 1457899999999999999999999887654332 122222222222222 2233322  233  1222211111


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          206 LDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       206 ~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                        .|..+...+..+.--+..++..+....|...|+-+......-....+++-+-..+.....|..++..|..+...+..|
T Consensus       203 --PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  203 --PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             --CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence              244333222222222234555677777888887777777777788888777789999999999999998776655443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.86  E-value=2.8e-08  Score=78.17  Aligned_cols=76  Identities=14%  Similarity=0.180  Sum_probs=66.4

Q ss_pred             CchhHHHHHHHHHH-HHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccC
Q 021135           47 APVYKYCLVSMSNI-LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  123 (317)
Q Consensus        47 ~~~~~~~~~s~~~~-~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~  123 (317)
                      .++......++... .+..+.+.|++|.+ +....+.++.|+++++++++++|||++++++++++++++|++++...+
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            45666666677655 77889999999999 577799999999999999999999999999999999999999997763

>TIGR00688 rarD rarD protein

Probab=98.85  E-value=2.3e-07  Score=83.41  Aligned_cols=136  Identities=13%  Similarity=0.111  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhh-cch-HHHHHHHHHHHH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHL-DCFFDVALLSTV  218 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~-~~~~~il~l~~~  218 (317)
                      |.++++++.++++...+..|. ..  +.++.+..++-..++.++..+.....++.....+..+ ... +.+..+...++.
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            888999999999999988875 33  4789999999999998776665543332111001111 111 122223333555


Q ss_pred             HHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhh
Q 021135          219 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  279 (317)
Q Consensus       219 ~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~  279 (317)
                      ....+.++++++++.++..++++..+.|+++.++++++++|+++..+|+|.++.++|+.+.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            5677789999999999999999999999999999999999999999999999999997654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.76  E-value=7.7e-08  Score=88.46  Aligned_cols=221  Identities=15%  Similarity=0.217  Sum_probs=122.6

Q ss_pred             HHHHHH-HHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccCCCCCCCC
Q 021135           52 YCLVSM-SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP  130 (317)
Q Consensus        52 ~~~~s~-~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  130 (317)
                      ..+.|+ .+..+..+++.|+.+.|.+..+=+.+...++.++++..++|||++++++.|++++++|..++....+. +.+.
T Consensus        52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~-~~~~  130 (300)
T PF05653_consen   52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPK-EEPI  130 (300)
T ss_pred             HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCC-CCCc
Confidence            344454 44566789999999999999888899999999999999999999999999999999999876543211 1110


Q ss_pred             CCCCCCchH------HH---HHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHH---HhCchhHH
Q 021135          131 YSKGRENTV------WG---VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLI---LEGHLFLA  198 (317)
Q Consensus       131 ~~~~~~~~~------~G---~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~  198 (317)
                      .   +..+.      .+   +........     ....-...++++.  .+.+.|....+.+-+.-.+.   ...-+.+.
T Consensus       131 ~---t~~~l~~~~~~~~fl~y~~~~~~~~-----~~L~~~~~~r~g~--~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~  200 (300)
T PF05653_consen  131 H---TLDELIALLSQPGFLVYFILVLVLI-----LILIFFIKPRYGR--RNILVYISICSLIGSFTVLSAKAISILIKLT  200 (300)
T ss_pred             C---CHHHHHHHhcCcceehhHHHHHHHH-----HHHHHhhcchhcc--cceEEEEEEeccccchhhhHHHHHHHHHHHH
Confidence            0   00111      11   111111111     1111111122221  11222322222111100000   00000000


Q ss_pred             h--HhhhcchHHHHHHHHHHHHHHHHH-HHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHHhcC--CCchhhh----hh
Q 021135          199 I--DFVYHHLDCFFDVALLSTVATTSQ-FFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRH--PLSWEQC----IG  268 (317)
Q Consensus       199 ~--~~~~~~~~~~~~il~l~~~~~~g~-~~~~~~l~~~~a~~~si~~~~-~~v~aiils~l~f~e--~~t~~~~----~G  268 (317)
                      +  +..-.+|..|..++.+ +.+.+.| .+.+.++++++++...++... -...+++-|.++|+|  .+++.++    .|
T Consensus       201 ~~g~~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G  279 (300)
T PF05653_consen  201 FSGDNQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCG  279 (300)
T ss_pred             hcCchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHH
Confidence            0  0011345555444333 3455666 577789999998876655544 556777888888987  4666554    55


Q ss_pred             hhHhHhHHHhhhhhcc
Q 021135          269 SIIVFGALYTRSFFKK  284 (317)
Q Consensus       269 ~~lv~~Gi~~~~~~k~  284 (317)
                      ..+++.|+++-...|+
T Consensus       280 ~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  280 FLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHhhheeeccCc
Confidence            6667788877654443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.64  E-value=1.1e-06  Score=80.06  Aligned_cols=133  Identities=9%  Similarity=-0.007  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHH
Q 021135          142 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  221 (317)
Q Consensus       142 ~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~  221 (317)
                      +.+.+++++++|...+..||..++  .++  ..++.+...++...|........ .  +......+.|..++.-++....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPD--FLWWALLAHSVLLTPYGLWYLAQ-V--GWSRLPATFWLLLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhH--HHHHHHHHHHHHHHHHHHHhccc-C--CCCCcchhhHHHHHHHHHHHHH
Confidence            356678889999999888765543  222  23555556666666654332100 0  0101112233333333445667


Q ss_pred             HHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          222 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       222 g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      .+.++++++++.++...+++..+.|+++.++++++++|+++..+|+|+.+++.|+.+...
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            778899999999999999999999999999999999999999999999999999876553

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.59  E-value=5.7e-07  Score=70.90  Aligned_cols=74  Identities=16%  Similarity=0.202  Sum_probs=65.4

Q ss_pred             CchhHHHHHHHH-HHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhh
Q 021135           47 APVYKYCLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  120 (317)
Q Consensus        47 ~~~~~~~~~s~~-~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~  120 (317)
                      ..+...+..++. ...+..+.+.++++++.+...++..+.|+++++++++++|||++++++++++++++|++++.
T Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   51 RQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            344556666665 57778999999999999999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.54  E-value=4e-06  Score=67.42  Aligned_cols=120  Identities=8%  Similarity=0.074  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHH-HH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VA  219 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~-~~  219 (317)
                      |+++++.+.++.+...+..|+=.++.+..+  ....    .    ......           ..+|..   .+++++ +.
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~--~~~~----~----~~~~~~-----------~~~p~~---~i~lgl~~~   58 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPLLS--HAWD----F----IAALLA-----------FGLALR---AVLLGLAGY   58 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCcc--chhH----H----HHHHHH-----------HhccHH---HHHHHHHHH
Confidence            788888898888887777765544433211  0000    0    000000           011211   233343 45


Q ss_pred             HHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHH--HhcCCCchhhhhhhhHhHhHHHhhhhhcc
Q 021135          220 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV--WFRHPLSWEQCIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       220 ~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l--~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~  284 (317)
                      .++.++|.+++++.+...+..+..+.++...+.++.  +|||++|+.+++|+++|++|+++....++
T Consensus        59 ~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         59 ALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            677889999999999999999999998888888885  89999999999999999999998765444

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.44  E-value=9.6e-06  Score=63.65  Aligned_cols=103  Identities=16%  Similarity=0.221  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHH-HHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHh
Q 021135          179 LCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWF  257 (317)
Q Consensus       179 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~-~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f  257 (317)
                      .++.++..+.....++..+..+....++  +...+..+.... .++.++++++++.++ .++++..+.|+++.+++.++|
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~   82 (113)
T PF13536_consen    6 LFSVLFLLIILLIRGRLRDLFRALRRKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF   82 (113)
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence            3444444444444555433333332333  223333355444 677788899999995 888999999999999999999


Q ss_pred             cCCCchhhhhhhhHhHhHHHhhhhhcc
Q 021135          258 RHPLSWEQCIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       258 ~e~~t~~~~~G~~lv~~Gi~~~~~~k~  284 (317)
                      +|+++..+++|..++++|+.+..+.+-
T Consensus        83 ~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   83 KERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            999999999999999999988776654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.41  E-value=1.2e-05  Score=75.83  Aligned_cols=139  Identities=14%  Similarity=0.114  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  220 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  220 (317)
                      -++.++.-.++++...++.+... +.+.++....++-..++.++.++........ .  .....++..|..+..+++++.
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~-~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~-~--~~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVAT-SKGLNIYPFLGYSYLLASLLLLPSLFFTNRS-R--SLPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHH-HCCCCccHHHHHHHHHHHHHHHHHHHHHHHh-c--ccCcchHHHHHHHHHHHHHHH
Confidence            34555556677777777777666 4578899999998889888877765432110 0  000012234445555555554


Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHH------hcCCCchhhhhhhhHhHhHHHhhhhhc
Q 021135          221 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW------FRHPLSWEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       221 ~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~------f~e~~t~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                      +.+.+++.++++.+|..++++.++.|+++.++++++      ++|+++..+++|+++-++|+.+....+
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~  158 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH  158 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence            445578889999999999999999999999999999      699999999999999999987765444

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.40  E-value=8.4e-06  Score=63.85  Aligned_cols=63  Identities=10%  Similarity=-0.024  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhh
Q 021135           58 SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  120 (317)
Q Consensus        58 ~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~  120 (317)
                      .+..+..+...+++.+|.+.+-.+.+..++.+++++++++|||++++|++++.++++|++++.
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            455667899999999999988777779999999999999999999999999999999998874

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.21  E-value=3.8e-05  Score=68.82  Aligned_cols=112  Identities=11%  Similarity=0.064  Sum_probs=83.1

Q ss_pred             HHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHH-HHHHHHHHHHHHHHhhCh
Q 021135          157 TFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIRTFGA  235 (317)
Q Consensus       157 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~-~~~~g~~~~~~~l~~~~a  235 (317)
                      +..|...++ ..++++..++....+.++..+.....           .....+...+..+. +..+.+.+++.++++.++
T Consensus         6 ~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         6 VVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             HHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            334433332 46788888888888877766543321           11123333344444 345666788899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          236 LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       236 ~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      ..++++..+.|+++.+++.++++|++++.+++|+++.+.|+.+..
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence            999999999999999999999999999999999999999987754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.16  E-value=7.6e-05  Score=68.87  Aligned_cols=127  Identities=11%  Similarity=0.023  Sum_probs=95.5

Q ss_pred             hhHHHHHHHHccCCCC--HHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021135          154 FTSTFQDKLFKGYDME--IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIR  231 (317)
Q Consensus       154 ~~~v~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~~~~~~l~  231 (317)
                      .+.+.||++.++...+  +.-+.+.+....++...+.....+..     .  .....+......+++..++..+-+.+++
T Consensus        14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~al~   86 (303)
T PF08449_consen   14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-----K--SRKIPLKKYAILSFLFFLASVLSNAALK   86 (303)
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-----C--CCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567899998765544  66777777777777666654433300     0  0111233334446677778788889999


Q ss_pred             hhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccccC
Q 021135          232 TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  287 (317)
Q Consensus       232 ~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~  287 (317)
                      +.+-.+..+.-..+++.+.++++++++++.+..++++.+++.+|+......+.+++
T Consensus        87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            99999999999999999999999999999999999999999999998887765444

; GO: 0055085 transmembrane transport

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.14  E-value=8.2e-05  Score=68.47  Aligned_cols=124  Identities=10%  Similarity=0.074  Sum_probs=88.5

Q ss_pred             HHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 021135          150 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYT  229 (317)
Q Consensus       150 ~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~~~~~~  229 (317)
                      ++....++++|...++. ..|..+.+....++.+...+.. ..+.. +   ......+.|..++..+++..+.+.+.+.+
T Consensus        12 ~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   85 (302)
T TIGR00817        12 FLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSW-SSGLP-K---RLKISSALLKLLLPVAIVHTIGHVTSNVS   85 (302)
T ss_pred             HHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHH-HhCCC-C---CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444456777777643 4566766666666655443331 11110 0   01112345666666677767777788899


Q ss_pred             HHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhh
Q 021135          230 IRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  279 (317)
Q Consensus       230 l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~  279 (317)
                      +++.++...+++..+.|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus        86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999998754

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.12  E-value=0.00017  Score=66.21  Aligned_cols=126  Identities=15%  Similarity=0.105  Sum_probs=92.0

Q ss_pred             HHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHH-HHHH
Q 021135          145 MVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA-TTSQ  223 (317)
Q Consensus       145 ~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~-~~g~  223 (317)
                      .+.-.+.|+...+..|....  +.+|.+..++-..++.++.++.....+.-     .  ...+.|......+... ...+
T Consensus        13 ~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272         13 LFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-----L--PTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-----C--CcHHHHHHHHHHHHHHHHHHH
Confidence            34456678877777765444  57899999999998888877765443321     0  1123344444444433 3455


Q ss_pred             HHHHHHH-HhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          224 FFISYTI-RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       224 ~~~~~~l-~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      .+++.+. ++.++..++++..+.|+++.+++.+ ++|+++..+++|..+.++|+.+..
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~  140 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN  140 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence            6777777 9999999999999999999999985 799999999999999999987654

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.12  E-value=1.6e-05  Score=62.68  Aligned_cols=73  Identities=12%  Similarity=0.106  Sum_probs=62.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhh
Q 021135           48 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  120 (317)
Q Consensus        48 ~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~  120 (317)
                      .|....+.|+....+..++|.|++.-++|-..=+..+.|+++.+++++++|||++..+|++++++++|++++.
T Consensus        66 ~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          66 SWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             eehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            3444455556666778899999999888877778889999999999999999999999999999999998764

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.10  E-value=0.00017  Score=64.76  Aligned_cols=140  Identities=13%  Similarity=0.120  Sum_probs=105.6

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHH
Q 021135          140 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA  219 (317)
Q Consensus       140 ~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~  219 (317)
                      -|+++.+.|-+.+++...+.+-+ +  +.++.|+..+--.++.++.+......++..+..+ ...+|..+.....-+ .-
T Consensus         7 ~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a-~l   81 (293)
T COG2962           7 KGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTA-LL   81 (293)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHH-HH
Confidence            49999999999999988777543 3  3577899889999999888877666655444333 335665554332211 11


Q ss_pred             HHHHH-HHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcc
Q 021135          220 TTSQF-FISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       220 ~~g~~-~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~  284 (317)
                      ...|. .+.++..+-....+|.=-.+.|.+.++++.++++|+++..||+..++..+|+....+...
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            23443 344678888899999999999999999999999999999999999999999987766544

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.09  E-value=0.00014  Score=68.47  Aligned_cols=136  Identities=7%  Similarity=-0.025  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  220 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  220 (317)
                      -..+++..-.+.......+|.+.+..+ .|+.+..+...++.++..+... .+ ..+..+. ......|..++.++++..
T Consensus        50 ~~~~~~~wy~~s~~~~~~nK~vl~~~~-~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~-~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         50 LALLFLTWYALNVLYVVDNKLALNMLP-LPWTISSLQLFVGWLFALLYWA-TG-FRKIPRI-KSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCC-CCHHHHHHHHHHHHHHHH
Confidence            334444455556666777887777542 2888888888887765444322 11 1000001 001124556666677777


Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          221 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       221 ~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      .++...+.++++.+++.++++..+.|++++++++++++|++++.++.|.+++++|+.+..
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            777666788999999999999999999999999999999999999999999999988654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.06  E-value=4.6e-05  Score=59.68  Aligned_cols=60  Identities=7%  Similarity=0.094  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhh
Q 021135          220 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  279 (317)
Q Consensus       220 ~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~  279 (317)
                      .++.+++.+++++.+...+-.+..+.++.+.++|+++|||++|+.+++|++++++|+..-
T Consensus        48 ~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         48 GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            456678888999999999999999999999999999999999999999999999998654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.02  E-value=0.00022  Score=65.63  Aligned_cols=123  Identities=11%  Similarity=-0.015  Sum_probs=87.0

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHH
Q 021135          143 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTS  222 (317)
Q Consensus       143 ~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g  222 (317)
                      ++.+++.++|+...+..|...+  +.+|....++-..++.+..++.....           ..+  +..++..++....+
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~-----------~~~--~~~~~~~g~~~~~~   71 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARP-----------KVP--LNLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCC-----------CCc--hHHHHHHHHHHHHH
Confidence            4566778899998888876554  47888888888777665444332111           001  11222223333333


Q ss_pred             H-HHHHHHHHh-hChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          223 Q-FFISYTIRT-FGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       223 ~-~~~~~~l~~-~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      + .+++.++++ .++..++++..+.|+++.++++++++|+++..+++|.++.++|+.+-.
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            3 355667776 578899999999999999999999999999999999999999977654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.88  E-value=0.00046  Score=63.39  Aligned_cols=129  Identities=5%  Similarity=-0.051  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  220 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  220 (317)
                      ++++++.+.++|+...+..|...+  ..+|....++-...+.++..+..    ....    ....  .+..++.-++...
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~----~~~~----~~~~--~~~~~~~~~l~~~   72 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV----GFPR----LRQF--PKRYLLAGGLLFV   72 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc----cccc----cccc--cHHHHHHHhHHHH
Confidence            566778888899988777776555  36788887777777766655432    1100    0111  1112211122222


Q ss_pred             HHHHHHHHHH----HhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          221 TSQFFISYTI----RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       221 ~g~~~~~~~l----~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      ..+.+.+.++    ++.++..++++..+.|+++.++++++++|++++.+++|+++.+.|+.+-..
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            2333444444    456888899999999999999999999999999999999999999876553

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.84  E-value=0.00035  Score=64.11  Aligned_cols=131  Identities=13%  Similarity=0.017  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  220 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  220 (317)
                      |++++++++++++...+..|++.   +.++.+.+  -..++.++...........     . ...+..+..-+.-+..=.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~-----~-~~~~~~~~~g~l~G~~w~   70 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLP-----E-FWALSIFLVGLLSGAFWA   70 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCC-----c-ccccHHHHHHHHHHHHHH
Confidence            57888999999999988886653   44444443  1233333333222221110     0 011333332222233446


Q ss_pred             HHHHHHHHHHHhhChHHHHHHHH-HHHHHHHHHHHHHhcCCCchhh----hhhhhHhHhHHHhhhhh
Q 021135          221 TSQFFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGALYTRSFF  282 (317)
Q Consensus       221 ~g~~~~~~~l~~~~a~~~si~~~-~~~v~aiils~l~f~e~~t~~~----~~G~~lv~~Gi~~~~~~  282 (317)
                      .+|++++.++++.+...+-.+.+ +.++++.+++.++|+|+.+..+    ++|.++++.|+++....
T Consensus        71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            78899999999999999988888 8888999999999999999999    99999999998876444

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.82  E-value=0.00054  Score=54.22  Aligned_cols=65  Identities=15%  Similarity=0.138  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHhhChHHH-HHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhc
Q 021135          219 ATTSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       219 ~~~g~~~~~~~l~~~~a~~~-si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                      -.++.+++..++++.+-..+ ++..-+.-+.+.++++++|||++|+.+++|++++++|+..-....
T Consensus        40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            34556677778888887654 444668889999999999999999999999999999997765544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.75  E-value=0.002  Score=58.00  Aligned_cols=142  Identities=12%  Similarity=0.023  Sum_probs=91.4

Q ss_pred             hHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHH
Q 021135          138 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST  217 (317)
Q Consensus       138 ~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~  217 (317)
                      ...+..+.+.+.+.++......+...+. ..+.....++....+.+...+.......  .   ........+...+.-.+
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~   78 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPR--G---LRPALRPWLLLLLLALL   78 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcc--c---ccccccchHHHHHHHHH
Confidence            4456666666767777777666555443 2344444444444444442222111110  0   00011111222222234


Q ss_pred             HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHH-HHhcCCCchhhhhhhhHhHhHHHhhhhhccc
Q 021135          218 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC-VWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  285 (317)
Q Consensus       218 ~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~-l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~  285 (317)
                      .....+.+++.++++.++..++++..+.|+++.+++. ++++|++++.++.|..+.+.|+.+...+...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            5566777888999999999999999999999999997 6679999999999999999999887765543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.67  E-value=0.00015  Score=65.92  Aligned_cols=216  Identities=13%  Similarity=0.212  Sum_probs=124.6

Q ss_pred             HHHHH-HHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhcc-CCCCCCCC
Q 021135           53 CLVSM-SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF-PSGADLSP  130 (317)
Q Consensus        53 ~~~s~-~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~~  130 (317)
                      .+.|+ +...+-..++.|..|.|.+..+=+.+...+..++++..++|||.+..-.++++++++|-.++... |...+.. 
T Consensus        67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~-  145 (335)
T KOG2922|consen   67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE-  145 (335)
T ss_pred             HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc-
Confidence            34454 44556788899999999998888999999999999999999999999999999999999877543 2111111 


Q ss_pred             CCCCCCchH------HHHH---HHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHH--hCc-hhHH
Q 021135          131 YSKGRENTV------WGVS---LMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGH-LFLA  198 (317)
Q Consensus       131 ~~~~~~~~~------~G~~---~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~-~~~~  198 (317)
                          .....      ++++   ....-.++     +..-....+++.  ..++.|....+.+-++-.+..  -|. +...
T Consensus       146 ----t~~el~~~~~~~~Fliy~~~iil~~~-----il~~~~~p~~g~--tnilvyi~i~s~iGS~tV~svKalg~aiklt  214 (335)
T KOG2922|consen  146 ----SVEEVWELATEPGFLVYVIIIILIVL-----ILIFFYAPRYGQ--TNILVYIGICSLIGSLTVMSVKALGIAIKLT  214 (335)
T ss_pred             ----cHHHHHHHhcCccHHHHHHHHHHHHH-----HHheeecccccc--cceeehhhHhhhhcceeeeeHHHHHHHHHHH
Confidence                00111      1211   11111110     000001112221  133445444443322211100  000 0000


Q ss_pred             hH--hhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHHhcC--CCchhhh----hhh
Q 021135          199 ID--FVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRH--PLSWEQC----IGS  269 (317)
Q Consensus       199 ~~--~~~~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~-~~v~aiils~l~f~e--~~t~~~~----~G~  269 (317)
                      ++  .-..+|..|..++.+..|..+-....+.+++.+++...+.+.+. -..++++.|.++|.|  ..+..++    .|.
T Consensus       215 ~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf  294 (335)
T KOG2922|consen  215 FSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGF  294 (335)
T ss_pred             hcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhH
Confidence            00  00134545544444344444444578889999999888877765 677888999999987  4565554    566


Q ss_pred             hHhHhHHHhhh
Q 021135          270 IIVFGALYTRS  280 (317)
Q Consensus       270 ~lv~~Gi~~~~  280 (317)
                      ..++.|+++-.
T Consensus       295 ~ti~~G~flL~  305 (335)
T KOG2922|consen  295 VTIFLGIFLLH  305 (335)
T ss_pred             HHhhheeeEee
Confidence            66777876653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.62  E-value=0.00063  Score=55.80  Aligned_cols=71  Identities=13%  Similarity=0.195  Sum_probs=63.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHh
Q 021135           49 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  119 (317)
Q Consensus        49 ~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~  119 (317)
                      +...+..++..+..+...+..++++++-++.++...|.+.+.++++++++++++.+++.|++++++|+.+.
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            33445556677777899999999999999999999999999999999999999999999999999998865

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.62  E-value=0.0017  Score=50.61  Aligned_cols=64  Identities=14%  Similarity=0.186  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHhhChHHH-HHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhc
Q 021135          220 TTSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       220 ~~g~~~~~~~l~~~~a~~~-si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                      .++.+++..++++.+-..+ ++..-+.-+.+.++++++|+|++++.+++|++++++|+..-....
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3444566678888876654 555668888999999999999999999999999999998765443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.61  E-value=0.0022  Score=59.75  Aligned_cols=77  Identities=12%  Similarity=0.257  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcc
Q 021135          208 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       208 ~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~  284 (317)
                      .|+..+.++++-.-+++++..+.++.+.+.++++.....+++.++|++++++++++.|++|+.+.++|+.+......
T Consensus        78 ~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   78 PWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            45555556888889999999999999999999999999999999999999999999999999999999887766654

Some of the sequences in this family are annotated as putative membrane proteins.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.60  E-value=0.00057  Score=61.09  Aligned_cols=71  Identities=11%  Similarity=0.174  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcccc
Q 021135          216 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  286 (317)
Q Consensus       216 ~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~  286 (317)
                      +++-++.+.+.+.++++.+|.+..+...++.+++.++++++++++++..||+++.+.+.|+..........
T Consensus        24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            33445666788889999999999999999999999999999999999999999999999998877766544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.54  E-value=0.00058  Score=54.88  Aligned_cols=71  Identities=15%  Similarity=0.176  Sum_probs=58.8

Q ss_pred             HHHHHH-HHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHH--HhccccchhHHHHHHHHHHhHHHhhcc
Q 021135           52 YCLVSM-SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL--IMQKRYKGYDYFLALLVTLGCSIFILF  122 (317)
Q Consensus        52 ~~~~s~-~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l--~~k~~~~~~~~~~~~l~~~Gv~l~~~~  122 (317)
                      ++..++ ++.++..+++.+++..+.+.+--+.+..+..+++.++.  ++||+++++|+++++++++|+.++...
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            455565 56777899999999999998766667777777777774  899999999999999999999998643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.52  E-value=0.00061  Score=53.91  Aligned_cols=73  Identities=11%  Similarity=0.039  Sum_probs=61.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhcc
Q 021135           50 YKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  122 (317)
Q Consensus        50 ~~~~~~s~~~~~~~~~~~~aL~~~s~~~-~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~  122 (317)
                      ......-+++..+.++...+++++|.+. +.+....-.+.+.+.+++++||++++.+++++.++++|++++-..
T Consensus        31 ~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         31 GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            3345555677778899999999999986 466667788899999999999999999999999999999887543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.48  E-value=0.037  Score=51.79  Aligned_cols=227  Identities=11%  Similarity=0.011  Sum_probs=123.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCChhHH-HHHhhcchHHHHHHHHHHhcccc---c----hhHHHHHHHHHHhHHHhhccCC
Q 021135           53 CLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTLIMQKRY---K----GYDYFLALLVTLGCSIFILFPS  124 (317)
Q Consensus        53 ~~~s~~~~~~~~~~~~aL~~~s~~~~-~ll~s~~pi~v~i~~~l~~k~~~---~----~~~~~~~~l~~~Gv~l~~~~~~  124 (317)
                      ++.|++...++..+..+.+|+..+.. -+......+...++..++++|-.   +    ..-.++++++++|+++......
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            55566777788999999999887754 35555667777888888887543   2    2357889999999999877311


Q ss_pred             CCCCCCCC--CCCCchHHHHHHHHHHHHHhhhhH-------HHHHHHHccCCCCHHHHHHHHHH---HHHHHHHH-HHHH
Q 021135          125 GADLSPYS--KGRENTVWGVSLMVGYLGFDGFTS-------TFQDKLFKGYDMEIHNQIFYTTL---CSCVLSLS-GLIL  191 (317)
Q Consensus       125 ~~~~~~~~--~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~  191 (317)
                      ..|.+...  .++.+..-|++.++++-+.++.++       ...+... +.+.++.....-+..   ++..+.-. ....
T Consensus       157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~  235 (345)
T PRK13499        157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCFI  235 (345)
T ss_pred             hcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00111100  112344579999999999999888       3332211 123343322221111   22111111 1111


Q ss_pred             ---hCchhH-HhHhhhcchHHHHHHHH--H-HHHHHHHHHHHHHHHHhhChHHHHH---HH-HHHHHHHHHHHHHHhcCC
Q 021135          192 ---EGHLFL-AIDFVYHHLDCFFDVAL--L-STVATTSQFFISYTIRTFGALTFAT---IM-TTRQLVSIVLSCVWFRHP  260 (317)
Q Consensus       192 ---~g~~~~-~~~~~~~~~~~~~~il~--l-~~~~~~g~~~~~~~l~~~~a~~~si---~~-~~~~v~aiils~l~f~e~  260 (317)
                         .++-.+ ..++....+..+...+.  + ++.=.++..++..+-++.+.....+   +. .+.-+++.+.++ +++|.
T Consensus       236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~  314 (345)
T PRK13499        236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW  314 (345)
T ss_pred             HHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence               111000 00110000111222111  1 2222345555555556664443333   33 566688899998 49997


Q ss_pred             Cc------hhhhhhhhHhHhHHHhhhh
Q 021135          261 LS------WEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       261 ~t------~~~~~G~~lv~~Gi~~~~~  281 (317)
                      =+      ..-++|+++++.|..+..+
T Consensus       315 K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        315 KGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             cCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            66      6668999999988766544

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.45  E-value=0.0057  Score=57.16  Aligned_cols=142  Identities=10%  Similarity=0.021  Sum_probs=90.9

Q ss_pred             chHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHH--HHHH---HHHHhCchhHHhHhhhcchHHHHH
Q 021135          137 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCV--LSLS---GLILEGHLFLAIDFVYHHLDCFFD  211 (317)
Q Consensus       137 ~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~g~~~~~~~~~~~~~~~~~~  211 (317)
                      +...|+++++++.+|++...+-+||    ++.-+||.. |. ..+..  +..|   ..+..+++.+..+  +.++..+..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~----~k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~--~~~~~~~~~   75 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK----VKKWSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYS--SFSGSTLLP   75 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc----cCCCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHH--hcCHHHHHH
Confidence            4567999999999999988887755    333456654 43 22221  1122   1222333322211  134445544


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhChHHHHHHHH-HHHHHHHHHHHHHhcCCC---c----hhhhhhhhHhHhHHHhhhhhc
Q 021135          212 VALLSTVATTSQFFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRHPL---S----WEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       212 il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~-~~~v~aiils~l~f~e~~---t----~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                      -+.-++.=.+||+..+.++++.+-+..-.+.+ +.-+...++..+++||--   +    ..-.+|.+++++|+.+..+.-
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            43445566789999999999999777666555 577788888999998632   2    345788899999999988854


Q ss_pred             ccc
Q 021135          284 KVS  286 (317)
Q Consensus       284 ~~~  286 (317)
                      .++
T Consensus       156 ~~k  158 (345)
T PRK13499        156 QLK  158 (345)
T ss_pred             hhc
Confidence            443

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.45  E-value=0.00094  Score=51.29  Aligned_cols=72  Identities=14%  Similarity=0.083  Sum_probs=61.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhh
Q 021135           49 VYKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  120 (317)
Q Consensus        49 ~~~~~~~s~~~~~~~~~~~~aL~~~s~~~-~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~  120 (317)
                      ++.....-+.+..+..+.-.|++++|.++ +.+-...-.+.+.+.+++++||+.+..+++++.++++|++..-
T Consensus        30 ~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          30 LWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            44455556677777888889999999986 5777777888899999999999999999999999999998874

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.40  E-value=0.0096  Score=48.41  Aligned_cols=129  Identities=14%  Similarity=0.188  Sum_probs=86.8

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHH-HHHHHH
Q 021135          143 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL-STVATT  221 (317)
Q Consensus       143 ~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l-~~~~~~  221 (317)
                      ++.+.+-.+-++....+.++.++.+ +++...+.....+.+......+..++.  ..+.....  .|+.  ++ ++++.+
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~--p~w~--~lGG~lG~~   76 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP--SLASLSSV--PWWA--YLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccC--ChHH--hccHHHHHH
Confidence            4455566666777777777776554 577777777788887777665554442  11111111  2222  22 556666


Q ss_pred             HHHHHHHHHHhhChHHHHHHHHHHH-HHHHHHHHH-Hh---cCCCchhhhhhhhHhHhHHHh
Q 021135          222 SQFFISYTIRTFGALTFATIMTTRQ-LVSIVLSCV-WF---RHPLSWEQCIGSIIVFGALYT  278 (317)
Q Consensus       222 g~~~~~~~l~~~~a~~~si~~~~~~-v~aiils~l-~f---~e~~t~~~~~G~~lv~~Gi~~  278 (317)
                      ...+...++++.++..+......-+ +.+.+++.+ +|   .+++++.+++|..++++|+++
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6677888899999999888877754 456666765 33   368999999999999999863

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.37  E-value=0.0013  Score=51.14  Aligned_cols=71  Identities=13%  Similarity=0.104  Sum_probs=59.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHh
Q 021135           49 VYKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  119 (317)
Q Consensus        49 ~~~~~~~s~~~~~~~~~~~~aL~~~s~~~-~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~  119 (317)
                      +......-+.+..+.++...+++++|.++ +.+-...-.+.+.+.+++++||++++.|++++.++++|++..
T Consensus        35 ~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         35 KIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            33344555667777888889999999986 577777778889999999999999999999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.36  E-value=0.0014  Score=50.63  Aligned_cols=72  Identities=10%  Similarity=0.026  Sum_probs=60.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhh
Q 021135           49 VYKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  120 (317)
Q Consensus        49 ~~~~~~~s~~~~~~~~~~~~aL~~~s~~~-~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~  120 (317)
                      +...+..-+.+..+.++...+++.+|.++ +.+-...-.+.+.+.+++++||+.++.|++++.++++|++..-
T Consensus        29 ~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         29 LTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            44445555667778888899999999986 5777777888899999999999999999999999999998873

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.33  E-value=0.007  Score=47.06  Aligned_cols=60  Identities=10%  Similarity=0.138  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHhhChHH-HHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhh
Q 021135          220 TTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  279 (317)
Q Consensus       220 ~~g~~~~~~~l~~~~a~~-~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~  279 (317)
                      .+..++...++|+.+-.+ .++.+-+.-+.+.+.++++|+|++++.+++|+++++.|+..-
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            345556667788887654 577777888999999999999999999999999999998764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.32  E-value=0.002  Score=50.27  Aligned_cols=69  Identities=9%  Similarity=0.049  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCChhHH-HHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhc
Q 021135           53 CLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL  121 (317)
Q Consensus        53 ~~~s~~~~~~~~~~~~aL~~~s~~~~-~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~  121 (317)
                      ...-+.+..+..+...+++.+|.+.+ .+-.....+.+.+.+++++||+.++.+++++.++++|++++-.
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34445677778888899999999864 5656667788899999999999999999999999999999854

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.28  E-value=0.013  Score=53.78  Aligned_cols=126  Identities=7%  Similarity=-0.039  Sum_probs=87.6

Q ss_pred             hHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHH
Q 021135          138 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST  217 (317)
Q Consensus       138 ~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~  217 (317)
                      ...|..+++++.++++......|...++  .++.+..++-..+++++.++.......        ...++.|...+..++
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~--~~~~~~~~~R~~~a~l~l~~~~~~~~~--------~~~~~~~~~~~~~g~   79 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPL--VGAPGVTALRLALGTLILIAIFKPWRL--------RFAKEQRLPLLFYGV   79 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHhHHhc--------cCCHHHHHHHHHHHH
Confidence            3678999999999999888888776653  678889999898888776654311100        012234444444555


Q ss_pred             HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhh
Q 021135          218 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  279 (317)
Q Consensus       218 ~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~  279 (317)
                      +....+.++++++++.++..++++..+.|+++.+++.    |++..  +.++.+.+.|+.+.
T Consensus        80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li  135 (293)
T PRK10532         80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFL  135 (293)
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHhee
Confidence            5556667888899999999999999999999988772    44443  34445556666543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.15  E-value=0.011  Score=45.52  Aligned_cols=62  Identities=13%  Similarity=0.224  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHhhChH-HHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          220 TTSQFFISYTIRTFGAL-TFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       220 ~~g~~~~~~~l~~~~a~-~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      .+...+...++|+.+-. ..++.+-.-.+.+.+.++++|+|++++.+++|+.++++|+..-..
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            34445666788888754 468888889999999999999999999999999999999876544

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.13  E-value=0.014  Score=45.10  Aligned_cols=61  Identities=7%  Similarity=0.117  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHhhChH-HHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhh
Q 021135          220 TTSQFFISYTIRTFGAL-TFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  280 (317)
Q Consensus       220 ~~g~~~~~~~l~~~~a~-~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~  280 (317)
                      .++.++...++|+.+-. ..++.+-+..+.+.+.++++|+|++++.+++|+.++++|+..-+
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            45556667788888755 45777888999999999999999999999999999999987653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.08  E-value=0.0033  Score=57.92  Aligned_cols=122  Identities=13%  Similarity=0.073  Sum_probs=84.7

Q ss_pred             CchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHH
Q 021135          136 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL  215 (317)
Q Consensus       136 ~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l  215 (317)
                      .+..+|+.+++.+.++.+...++|||-..+.+.+....                   ++  ...++. .+| .|+.-+. 
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~--~~~~~l-~~~-~W~~G~~-   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GS--GGRSYL-RRP-LWWIGLL-   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cc--hhhHHH-hhH-HHHHHHH-
Confidence            34678999999999999999999988654332211000                   00  000110 112 3332221 


Q ss_pred             HHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhc
Q 021135          216 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       216 ~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                        ...+|..+-+.++...+++..++++.+.-+++.+++..+++|+++...++|.++++.|........
T Consensus        59 --~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   59 --LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             --HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence              123555566668888899999999999999999999999999999999999999999976555433

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.91  E-value=0.011  Score=53.23  Aligned_cols=117  Identities=16%  Similarity=0.139  Sum_probs=78.6

Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Q 021135          165 GYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTT  244 (317)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~  244 (317)
                      |.+-+|.+..+-+..-+.++.+...+....-.      ..++..+..-+.-+++=.+||...+.+.++.+-+++-++++-
T Consensus         7 k~gG~~~~Q~lG~t~Gali~alv~~~~~~p~~------~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg   80 (269)
T PF06800_consen    7 KIGGKPANQILGTTIGALIFALVVFLFRQPAF------SMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTG   80 (269)
T ss_pred             eeCCcHHHHHHHHHHHHHHHHHHHHHHhCCCc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchh
Confidence            34557777777666666666555444332110      011233333222255567899999999999999999888866


Q ss_pred             -HHHHHHHHHHHHhcCCCchhhhh----hhhHhHhHHHhhhhhccccC
Q 021135          245 -RQLVSIVLSCVWFRHPLSWEQCI----GSIIVFGALYTRSFFKKVSE  287 (317)
Q Consensus       245 -~~v~aiils~l~f~e~~t~~~~~----G~~lv~~Gi~~~~~~k~~~~  287 (317)
                       +-+.+.++++++|||.-+..+++    ++++++.|+++..+.+++++
T Consensus        81 ~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~  128 (269)
T PF06800_consen   81 LQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD  128 (269)
T ss_pred             HHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc
Confidence             44558889999999987766644    67778889999888776554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.88  E-value=0.0086  Score=45.21  Aligned_cols=53  Identities=15%  Similarity=0.232  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHHhhChHHH-HHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHh
Q 021135          220 TTSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV  272 (317)
Q Consensus       220 ~~g~~~~~~~l~~~~a~~~-si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv  272 (317)
                      .++.+++..++|+.+..++ .+..-+..+.+.+.|+++|||++|+.+++|+.+|
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3455677888999988777 5566789999999999999999999999999885

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.64  E-value=0.00021  Score=62.56  Aligned_cols=209  Identities=8%  Similarity=0.088  Sum_probs=127.9

Q ss_pred             HHHHHHHHHHHHHHhhhcCChhHHH-HHhhcchHHHHHHHHHHhccccchhHH----HHHHHHHHhHHHhhccCCCCCCC
Q 021135           55 VSMSNILTTTCQYEALKYVSFPVQT-LAKCAKMIPVMIWGTLIMQKRYKGYDY----FLALLVTLGCSIFILFPSGADLS  129 (317)
Q Consensus        55 ~s~~~~~~~~~~~~aL~~~s~~~~~-ll~s~~pi~v~i~~~l~~k~~~~~~~~----~~~~l~~~Gv~l~~~~~~~~~~~  129 (317)
                      .|+....+...++.|.++..++.++ +-..+..+-+-+++++.++|..+..|.    ++++++++|+.+-...+.    +
T Consensus        65 sG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~----~  140 (288)
T COG4975          65 SGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR----N  140 (288)
T ss_pred             hhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc----c
Confidence            3345555677888999987766443 223344555668899999998888764    567778888877655421    1


Q ss_pred             CCCCC-CCchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHH
Q 021135          130 PYSKG-RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC  208 (317)
Q Consensus       130 ~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  208 (317)
                      ++..+ .++.-.|+...+.+.+.|-.|.+..+    ..+.+.+...+-+..-..+..+.......+-       ..+...
T Consensus       141 nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~----~f~v~g~saiLPqAiGMv~~ali~~~~~~~~-------~~~K~t  209 (288)
T COG4975         141 NKEEENPSNLKKGIVILLISTLGYVGYVVLFQ----LFDVDGLSAILPQAIGMVIGALILGFFKMEK-------RFNKYT  209 (288)
T ss_pred             cccccChHhhhhheeeeeeeccceeeeEeeec----cccccchhhhhHHHHHHHHHHHHHhhccccc-------chHHHH
Confidence            11111 13334588887778887777766543    3344555544433332222222222211110       011234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhh----hhhhhHhHhHHHhh
Q 021135          209 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGALYTR  279 (317)
Q Consensus       209 ~~~il~l~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~----~~G~~lv~~Gi~~~  279 (317)
                      |..+ .-++.=.+|+++++.+-++.+-.+.=.++.+.-+++.+-++++++|+=|..+    ++|+++++.|..+.
T Consensus       210 ~~ni-i~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         210 WLNI-IPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             HHHH-hhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence            4333 2245556788888888877777776667777788999999999999988877    56777777665443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.48  E-value=0.0049  Score=48.09  Aligned_cols=69  Identities=13%  Similarity=0.164  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCChhHHH-HHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHh
Q 021135           51 KYCLVSMSNILTTTCQYEALKYVSFPVQT-LAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  119 (317)
Q Consensus        51 ~~~~~s~~~~~~~~~~~~aL~~~s~~~~~-ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~  119 (317)
                      +|...=+.|..+....+..|...+.+.++ +.+++.-++|.+.++++.+|..+++.++|+++++.|+.++
T Consensus        43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            45555567788888899999999988765 5579999999999999999999999999999999998764

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.41  E-value=0.011  Score=44.63  Aligned_cols=57  Identities=14%  Similarity=0.083  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHHHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccchhHHHHHHHH
Q 021135           56 SMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLV  112 (317)
Q Consensus        56 s~~~~~~~~~~~~aL~~~s~~~-~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~  112 (317)
                      -..+..+..+...+++++|.++ +.+......+.+.+.+.+++||+.+.+|++++.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3467777889999999999986 47777788899999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.34  E-value=0.0012  Score=58.59  Aligned_cols=67  Identities=12%  Similarity=0.220  Sum_probs=62.1

Q ss_pred             HHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhh
Q 021135          216 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  282 (317)
Q Consensus       216 ~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~  282 (317)
                      ++.+..|....+|++++.+-.-+++++...|++++++++++++||.|.+..+|..+.+.|+++..++
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence            6778888889999999999999999999999999999999999999999999999999999886643

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.20  E-value=0.031  Score=50.06  Aligned_cols=66  Identities=18%  Similarity=0.153  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHhhChHHH-HHHHHHHHHHHHHHHHH-HhcCC-----CchhhhhhhhHhHhHHHhhhhhccccC
Q 021135          222 SQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCV-WFRHP-----LSWEQCIGSIIVFGALYTRSFFKKVSE  287 (317)
Q Consensus       222 g~~~~~~~l~~~~a~~~-si~~~~~~v~aiils~l-~f~e~-----~t~~~~~G~~lv~~Gi~~~~~~k~~~~  287 (317)
                      |+.+..-.+++.|-... .+.++..-+.....+-+ +||.+     -.+.+++|.++++.|..++..-|.+.+
T Consensus        68 gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   68 GNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             CceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            33333334455543322 23333344445555543 56543     567889999999988777766665543

The region concerned is approximately 280 residues long.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.19  E-value=0.24  Score=40.61  Aligned_cols=136  Identities=12%  Similarity=0.147  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHH
Q 021135          139 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV  218 (317)
Q Consensus       139 ~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~  218 (317)
                      ++.++..+.+-.+-.+....+.++.+..+ +|.-..+.....+++......+.... ...+...  .+.-|+..+    .
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~--~~~pwW~~~----G   75 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQG-HPGLAAV--ASAPWWAWI----G   75 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhc--cCCchHHHH----c
Confidence            45566667777777788888888876544 56655666666666665554433221 1111211  122233221    2


Q ss_pred             HHHHHHHHHH---HHHhhChHHHHHHHHH-HHHHHHHHHHHHhc----CCCchhhhhhhhHhHhHHHhhhhh
Q 021135          219 ATTSQFFISY---TIRTFGALTFATIMTT-RQLVSIVLSCVWFR----HPLSWEQCIGSIIVFGALYTRSFF  282 (317)
Q Consensus       219 ~~~g~~~~~~---~l~~~~a~~~si~~~~-~~v~aiils~l~f~----e~~t~~~~~G~~lv~~Gi~~~~~~  282 (317)
                      +.+|..+++.   ..++.+++++..+... +-+.+.+++.+=+.    +++++..++|++++++|+++....
T Consensus        76 G~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          76 GLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             cchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            3455555554   3577887777666555 44555666665443    589999999999999996665443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.98  E-value=0.63  Score=43.29  Aligned_cols=61  Identities=15%  Similarity=0.213  Sum_probs=55.7

Q ss_pred             HHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcc
Q 021135          224 FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  284 (317)
Q Consensus       224 ~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~  284 (317)
                      ...+.++.+.+|.+..+...++...+.+++++++++++++.||...++.++|+.+.+....
T Consensus       107 nl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen  107 NLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             hHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            4677789999999999999999999999999999999999999999999999988884433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.33  E-value=0.24  Score=40.20  Aligned_cols=99  Identities=12%  Similarity=0.130  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCChhHH-HHHhhcchHHHHHHHHH--
Q 021135           19 MIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTL--   95 (317)
Q Consensus        19 ~~~~~~gi~~~~~~~g~~qe~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~-~ll~s~~pi~v~i~~~l--   95 (317)
                      +.....|.......+-+.++...+..++.||+.|+ -|++......+...+...+.++.. .+.-.-+.+..++++.+  
T Consensus        35 ~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~  113 (138)
T PF04657_consen   35 FISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGL  113 (138)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccc
Confidence            33344444444444433433221223356887776 566777777888888888887755 34445566667777765  


Q ss_pred             --HhccccchhHHHHHHHHHHhHHH
Q 021135           96 --IMQKRYKGYDYFLALLVTLGCSI  118 (317)
Q Consensus        96 --~~k~~~~~~~~~~~~l~~~Gv~l  118 (317)
                        .-|+++++++.++++++++|+.+
T Consensus       114 fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  114 FGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHhC
Confidence              46799999999999999999864

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.67  E-value=0.017  Score=50.96  Aligned_cols=132  Identities=14%  Similarity=0.027  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHH
Q 021135          141 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  220 (317)
Q Consensus       141 G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  220 (317)
                      +++.+++=++.|+......    .|.+-+|++...-+.+-+.++.+...+.....        ..+..+..-+.-+..=.
T Consensus         3 ~~liaL~P~l~WGsip~v~----~k~GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------~T~~~~iv~~isG~~Ws   70 (288)
T COG4975           3 DLLIALLPALGWGSIPLVA----NKFGGKPYQQTLGTTLGALIFAIIVFLFVSPE--------LTLTIFIVGFISGAFWS   70 (288)
T ss_pred             hHHHHHHHHHHhcccceee----eecCCChhHhhhhccHHHHHHHHHHheeecCc--------cchhhHHHHHHhhhHhh
Confidence            3556666777888765544    34456788877666655555555543322110        11122211111133446


Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHHhcCCCchhhhh----hhhHhHhHHHhhhhhcc
Q 021135          221 TSQFFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRHPLSWEQCI----GSIIVFGALYTRSFFKK  284 (317)
Q Consensus       221 ~g~~~~~~~l~~~~a~~~si~~~~-~~v~aiils~l~f~e~~t~~~~~----G~~lv~~Gi~~~~~~k~  284 (317)
                      +||..-+.+++..+.+.+.++++- +-+-+.+++++.|||--++.|.+    ..++++.|+++..+.++
T Consensus        71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            899999999999998888887775 56677899999999988887743    44556678888776554

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.62  E-value=0.086  Score=46.77  Aligned_cols=58  Identities=9%  Similarity=-0.002  Sum_probs=52.6

Q ss_pred             HHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhc
Q 021135           64 TCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL  121 (317)
Q Consensus        64 ~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~  121 (317)
                      .+...+|+.+|..++.++-+..|..-.+.++++++|+++..||++++.++.+.+-.+.
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            5788999999999999999999999999999999999999999999998887664443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=94.61  E-value=0.064  Score=41.91  Aligned_cols=60  Identities=5%  Similarity=0.058  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHhhChHHHHHHH-HHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHh
Q 021135          219 ATTSQFFISYTIRTFGALTFATIM-TTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  278 (317)
Q Consensus       219 ~~~g~~~~~~~l~~~~a~~~si~~-~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~  278 (317)
                      +..|...+++.+++.+-+.+.++. .+.-+++.+.++++.+|..++..++|+.+++.|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            556677888899999988888885 788899999998888888999999999999999754

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.80  E-value=2  Score=39.94  Aligned_cols=144  Identities=9%  Similarity=0.036  Sum_probs=77.2

Q ss_pred             CchHHHHHHHHHHHHHhhhhHHHHHHHHccCCCCHHHHHHH-HHHHHHHHHHHHH---HHhCchhHHhHhhhcch-HHHH
Q 021135          136 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY-TTLCSCVLSLSGL---ILEGHLFLAIDFVYHHL-DCFF  210 (317)
Q Consensus       136 ~~~~~G~~~~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~-~~~~  210 (317)
                      .....|+++..++.++.+.+.+=.||    .+.-.||..-. +..++.++ .|..   +..+++.+   .....| +.+.
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kk----vk~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~---i~~~~~~~~l~   74 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKK----VKGWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFS---IYSATPASTLF   74 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhh----cCCccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHH---HHHhCChhHHH
Confidence            34578999999999998877766544    34445665432 33344333 3432   22233322   333333 3333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhChH-HHHHHHHHHHHHHHHHHHHH-------hcCCCchhhhhhhhHhHhHHHhhhhh
Q 021135          211 DVALLSTVATTSQFFISYTIRTFGAL-TFATIMTTRQLVSIVLSCVW-------FRHPLSWEQCIGSIIVFGALYTRSFF  282 (317)
Q Consensus       211 ~il~l~~~~~~g~~~~~~~l~~~~a~-~~si~~~~~~v~aiils~l~-------f~e~~t~~~~~G~~lv~~Gi~~~~~~  282 (317)
                      ....+++.=-+|.+.+-.++|+.+-+ ..++..-+..++..++--++       ++++-...-++|.++.++|+.+..+.
T Consensus        75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            33333443335555555667766633 23333333333333333333       23344557789999999999888776


Q ss_pred             ccccC
Q 021135          283 KKVSE  287 (317)
Q Consensus       283 k~~~~  287 (317)
                      -.+|+
T Consensus       155 G~~Ke  159 (344)
T PF06379_consen  155 GSMKE  159 (344)
T ss_pred             HHhhh
Confidence            54433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.68  E-value=1.5  Score=40.14  Aligned_cols=128  Identities=12%  Similarity=0.072  Sum_probs=92.6

Q ss_pred             hhhhHHHHHHHHc-cCC------CCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHHHH
Q 021135          152 DGFTSTFQDKLFK-GYD------MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQF  224 (317)
Q Consensus       152 ~a~~~v~~~~l~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~  224 (317)
                      +-..+++|||+.. .|+      .++.-+.+.+.+.+.+++...+-...       -...+...|+..-+.++.+.++..
T Consensus        26 ~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k-------~~~~~~apl~~y~~is~tn~~s~~   98 (327)
T KOG1581|consen   26 FLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWK-------KELSGVAPLYKYSLISFTNTLSSW   98 (327)
T ss_pred             HHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccc-------ccCCCCCchhHHhHHHHHhhcchH
Confidence            3345678999854 341      24444555666666655533321110       001223345555566778888888


Q ss_pred             HHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhcccc
Q 021135          225 FISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  286 (317)
Q Consensus       225 ~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~  286 (317)
                      |-+.++|+++=-+..+.-..+-+-..+.+.++.+.+.++...+-..+|-.|+....+.++++
T Consensus        99 ~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   99 CGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            99999999999999999999999999999999999999999999999999998888887765

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.44  E-value=0.16  Score=47.52  Aligned_cols=77  Identities=5%  Similarity=0.121  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhccccCCCCCCCCC
Q 021135          219 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHP  295 (317)
Q Consensus       219 ~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k~~~~~~~~~~~~  295 (317)
                      =.++++.+..+++..+....+++..+.-+|++.++.++-+|.+|+...++..+-++|+++.+..+.+++.+.+++.|
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~  245 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRP  245 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccch
Confidence            35677888889999999999999999999999999999999999999999999999999999887766554444433

>TIGR00803 nst UDP-galactose transporter

Probab=92.62  E-value=0.11  Score=45.48  Aligned_cols=62  Identities=15%  Similarity=0.216  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHH
Q 021135           57 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI  118 (317)
Q Consensus        57 ~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l  118 (317)
                      +.......+.+..++|.+..+..+...+.++++.+++.++++++++..+++++.+++.|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            33444455667778888888888999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=91.79  E-value=0.26  Score=45.69  Aligned_cols=122  Identities=10%  Similarity=0.032  Sum_probs=75.0

Q ss_pred             HhhhhHHHHHHHHccCC-CCHHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 021135          151 FDGFTSTFQDKLFKGYD-MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYT  229 (317)
Q Consensus       151 ~~a~~~v~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~~g~~~~~~~  229 (317)
                      +.....+++++++++++ .-|+.+.......+++.....-.+ +.. +....  .++..|..++-++++-.++..+-+-+
T Consensus        28 ~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l-~~~-~~~~~--~~~~~~~~llpl~~~~~~~~v~~n~S  103 (316)
T KOG1441|consen   28 LSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVL-KLV-PPSKI--SSKLPLRTLLPLGLVFCISHVLGNVS  103 (316)
T ss_pred             hheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHh-cCC-CCCcc--ccccchHHHHHHHHHHHHHHHhcchh
Confidence            33344556777776443 234444333334444433332211 110 10000  12234666666787888888888889


Q ss_pred             HHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHH
Q 021135          230 IRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGAL  276 (317)
Q Consensus       230 l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi  276 (317)
                      +++.+-..+.++-.+.|+++++++.++.+|..+...+.-.+.+..|+
T Consensus       104 l~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV  150 (316)
T KOG1441|consen  104 LSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGV  150 (316)
T ss_pred             hhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeE
Confidence            99999999999999999999999999999998875444443333333

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.41  E-value=0.36  Score=42.45  Aligned_cols=74  Identities=8%  Similarity=0.172  Sum_probs=61.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhc
Q 021135           48 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL  121 (317)
Q Consensus        48 ~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~  121 (317)
                      -|+.+..+++..+++.++.+.-..+...-+-.+...+.-.++.+.+.++++..++.|||++..+++.+...-..
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            35677888888888988888888776655666777778889999999999999999999999999998776543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=90.45  E-value=0.28  Score=41.96  Aligned_cols=63  Identities=8%  Similarity=0.217  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhc
Q 021135          221 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       221 ~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                      .+++.+..++++.+|+.++-+....+.+..+++++++++.+.-..++...+.+.|++...+..
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            455677789999999999999999999999999999999999999999999999987766544

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=89.96  E-value=4.3  Score=31.11  Aligned_cols=93  Identities=14%  Similarity=0.217  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHH-----HHHHHHHHHHhhhcCChh-HHHHHhhcchHHHHHHHH
Q 021135           21 FAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMS-----NILTTTCQYEALKYVSFP-VQTLAKCAKMIPVMIWGT   94 (317)
Q Consensus        21 ~~~~gi~~~~~~~g~~qe~~~~~~~~~~~~~~~~~s~~-----~~~~~~~~~~aL~~~s~~-~~~ll~s~~pi~v~i~~~   94 (317)
                      ..+.-++.++.+||=+.     .++..|++..+..|=.     |++..-.+-.+.+..|.+ ..++=...+....++++.
T Consensus         7 L~~SN~FMTfAWYGHLK-----~~~~~pl~~ail~SWgIAffEY~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv   81 (108)
T PF04342_consen    7 LILSNIFMTFAWYGHLK-----FKSSKPLWIAILISWGIAFFEYCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSV   81 (108)
T ss_pred             HHHHHHHHHHHHHHHhh-----ccccCcHHHHHHHHHHHHHHHHHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHH
Confidence            44456788888888773     1223577665555522     222222222333332322 122222334445567788


Q ss_pred             HHhccccchhHHHHHHHHHHhHHH
Q 021135           95 LIMQKRYKGYDYFLALLVTLGCSI  118 (317)
Q Consensus        95 l~~k~~~~~~~~~~~~l~~~Gv~l  118 (317)
                      +++||++++++..+-+.++.++..
T Consensus        82 ~~l~E~l~~n~l~af~~i~~av~f  105 (108)
T PF04342_consen   82 FYLGEPLKWNYLWAFLCILGAVYF  105 (108)
T ss_pred             HHhCCCccHHHHHHHHHHHHhhhe
Confidence            999999999999988887766544

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=87.37  E-value=1.5  Score=39.70  Aligned_cols=66  Identities=11%  Similarity=0.113  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhh
Q 021135          216 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  281 (317)
Q Consensus       216 ~~~~~~g~~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~  281 (317)
                      ++|-..|....+-++...+|+...+.--...+|+-++|..++++.++..||+|+..+..|+...-.
T Consensus        93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            345555666666677778888888888888899999999999999999999999999999875543

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=86.84  E-value=0.91  Score=34.72  Aligned_cols=70  Identities=13%  Similarity=0.221  Sum_probs=56.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCChhHHH-HHhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHh
Q 021135           50 YKYCLVSMSNILTTTCQYEALKYVSFPVQT-LAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  119 (317)
Q Consensus        50 ~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~-ll~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~  119 (317)
                      ++|.+.-+.+-++..++|.-|+..+.+.++ +-.++.-.++.+.+..+..|....+..++..++++|+.+.
T Consensus        53 w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   53 WEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence            467777778888889999999998887654 5677788899999988776777777899999999998765

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=83.65  E-value=25  Score=32.50  Aligned_cols=131  Identities=12%  Similarity=0.089  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHccCCCC-HHHHHHHHHHHHHHHHHHHHHHhCchhHHhHhhhcchHHHHHHHHHHHHHH
Q 021135          142 VSLMVGYLGFDGFTSTFQDKLFKGYDME-IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  220 (317)
Q Consensus       142 ~~~~l~a~~~~a~~~v~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  220 (317)
                      ...++...++.-...+.+|.+..+|+-+ ..-++.++++.+++.....-. .| +.+..++-...+..|..+-.+    .
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~-lv~~~~l~~~~~kk~~P~~~l----f   87 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LG-LVNFRPLDLRTAKKWFPVSLL----F   87 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hc-eeecCCcChHHHHHHccHHHH----H
Confidence            3334444444445556666667777533 234445777777665443311 11 100000001122333322111    1


Q ss_pred             HHH-HHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHh
Q 021135          221 TSQ-FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  278 (317)
Q Consensus       221 ~g~-~~~~~~l~~~~a~~~si~~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~  278 (317)
                      .+. +.-...+++.+-...+++-.+.++++.+...++|+..++..-|......++|-..
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~  146 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVA  146 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHh
Confidence            111 2233468999999999999999999999999999999999999999888877543

>PRK02237 hypothetical protein; Provisional

Probab=83.34  E-value=19  Score=27.81  Aligned_cols=36  Identities=17%  Similarity=0.393  Sum_probs=31.4

Q ss_pred             HHHHHHHHHhccccchhHHHHHHHHHHhHHHhhccC
Q 021135           88 PVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  123 (317)
Q Consensus        88 ~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~~  123 (317)
                      ...+..+.+-|+|+++.++++..++++|+.++...|
T Consensus        72 ~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         72 GSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            345778899999999999999999999999987653

>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]

Probab=83.11  E-value=8.7  Score=32.63  Aligned_cols=85  Identities=18%  Similarity=0.194  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHhhcchHHHHHHHHH-
Q 021135           17 LKMIFAVSGIMTTLVIYGILQASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL-   95 (317)
Q Consensus        17 ~~~~~~~~gi~~~~~~~g~~qe~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~aL~~~s~~~~~ll~s~~pi~v~i~~~l-   95 (317)
                      ..++..+.|-+..+..|.|.-..+.+...+-++++++.......+-..+-+.+-.++|.+..   -...|+...+.+.+ 
T Consensus       129 tlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN---~~L~pi~l~IiGav~  205 (226)
T COG4858         129 TLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLN---PQLPPIALTIIGAVI  205 (226)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCC---cCCchHHHHHHHHHH
Confidence            34556677788888888887655544444567777776665544444444555556665543   23456665555543 


Q ss_pred             -----Hhccccchh
Q 021135           96 -----IMQKRYKGY  104 (317)
Q Consensus        96 -----~~k~~~~~~  104 (317)
                           .+|||++.+
T Consensus       206 lalRfylkkk~NIq  219 (226)
T COG4858         206 LALRFYLKKKKNIQ  219 (226)
T ss_pred             HHHHHHHHHhhccc
Confidence                 345555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	317
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.88
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.37
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.16
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.08

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.88  E-value=2.5e-09  Score=85.72  Aligned_cols=67  Identities=13%  Similarity=0.173  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHHHhhChHHHHHH-HHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhhc
Q 021135          217 TVATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  283 (317)
Q Consensus       217 ~~~~~g~~~~~~~l~~~~a~~~si~-~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~k  283 (317)
                      ++..++++++.+++++.++.++..+ ..+.|+++.++++++|||++|+.+++|++++++|++.....+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3456777899999999999999888 899999999999999999999999999999999998877644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.37  E-value=2.2e-06  Score=65.92  Aligned_cols=65  Identities=14%  Similarity=0.181  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHhhChHHHHHH-HHHHHHHHHHHHHHHhcCCCchhhhhhhhHhHhHHHhhhhh
Q 021135          218 VATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  282 (317)
Q Consensus       218 ~~~~g~~~~~~~l~~~~a~~~si~-~~~~~v~aiils~l~f~e~~t~~~~~G~~lv~~Gi~~~~~~  282 (317)
                      +..++++++.+++|+.+..++..+ ..+.|+.+.++++++|||++|+.+++|+++++.|++.....
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            345666788889999999999888 89999999999999999999999999999999999877654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.16  E-value=2.1e-05  Score=60.37  Aligned_cols=71  Identities=10%  Similarity=0.022  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCChhHHHH-HhhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhcc
Q 021135           52 YCLVSMSNILTTTCQYEALKYVSFPVQTL-AKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  122 (317)
Q Consensus        52 ~~~~s~~~~~~~~~~~~aL~~~s~~~~~l-l~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~  122 (317)
                      .+...+.+..+..+...++++.|.+.+-- .....|+.+++++++++||+++++|++++.++++|++++...
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34444466777889999999999998754 489999999999999999999999999999999999998654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.08  E-value=9.3e-06  Score=64.80  Aligned_cols=70  Identities=10%  Similarity=0.045  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCChhHHHHH-hhcchHHHHHHHHHHhccccchhHHHHHHHHHHhHHHhhcc
Q 021135           53 CLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  122 (317)
Q Consensus        53 ~~~s~~~~~~~~~~~~aL~~~s~~~~~ll-~s~~pi~v~i~~~l~~k~~~~~~~~~~~~l~~~Gv~l~~~~  122 (317)
                      +...+++..+..+.+.++++++.+.+..+ ....|++++++++++++|+++++|+++++++++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33345677778999999999999966444 89999999999999999999999999999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00