Citrus Sinensis ID: 021178

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMIKLEGSQQHDQKRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Secondary Structure (PSIPRED)
cccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHcHHHccEEEEccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccHHHccccEEcccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHcccccccccccccccccccEEcccccEEcccccHHHHHcccccHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mapmylnpaqdhsdpfRLAEAQKRDHQRLQVLhssshnrpaasvsrpiflnsstqdqgmiklegsqqhdqkriagggssdlqssmsqpktmtNKLAIRRrevgegstsdnssytssssgesmSSKMRLANKIinsssvstgthdESVKVAEKLLHehdnievhyfttnssnsnntvricsdcnttttplwrsgprgpkslcnacGIRQRKARKAMQAAAEsgtttakdnssfSKIKlqnnmekkprtshvaqykkvqcntpdpdpphheyrsqrkLCFKDFAlslssnsalkqvfpRDVEEAAILLMELSCGFSHT
Flexible Loop (DISEMBL)
mapmylnpaqdhsDPFRLAEAQKRDHQRLQVLhssshnrpaasvsrPIFLNSSTQDQGMIKLEGSQQHDQKRIAGGgssdlqssmsqpkTMTNKLAIrrrevgegstsdnssytssssgesmSSKMRLANKIInsssvstgthDESVKVAEKLLHEHDNIEVHyfttnssnsnntVRICSDCNTtttplwrsgprgpkslCNACGIRQRKARKAMQAAAesgtttakdnssfskiklqnnmekkprtshVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Low Complexity Region (SEG)
MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMIKLEGSQQHDQKRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGstsdnssytssssgesmssKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFttnssnsnntVRICSDCNTTTTPLWRSGPRGPKSLCNACGIrqrkarkamqaaaESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Disordered region (IsUnstruct)
******************************************************************************************************************************************************EKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWR********LCNACG*********************************************************************KLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCG****
Disordered Region (DISOPRED)
************************************************************************************************************************************************************************************DCNTTTTPLWRSGPRGPKSLCNACGIRQ*********************************************************************************************AAILLMELSCGFSHT
Disordered Region (DISEMBL)
********AQDHSDPFRLAEAQKRDHQRLQVL**********SVSRPIFLNSSTQDQGMIKLEG***************************TNKLAIRRR*************************MRLANKIINSS*********SVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGI************************SFSKIKLQNN************YKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Disordered Region (DISPRO)
******NP*QDHSDPFRLAEAQKRDHQRLQVLHSS*******SVSRPI*L*SS************************************************************************************************************************NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESG**************************************************QRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMIKLEGSQQHDQKRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	316	2.2.26 [Sep-21-2011]
Q9SZI6	352	Putative GATA transcripti	yes	no	0.784	0.704	0.353	4e-22
Q5HZ36	398	GATA transcription factor	no	no	0.433	0.344	0.390	2e-17
Q8LC59	120	GATA transcription factor	no	no	0.161	0.425	0.568	7e-13
Q9FJ10	139	GATA transcription factor	no	no	0.148	0.338	0.595	3e-12
Q8LG10	149	GATA transcription factor	no	no	0.183	0.389	0.517	1e-11
Q6QPM2	211	GATA transcription factor	no	no	0.170	0.255	0.551	1e-11
Q8VZP4	308	GATA transcription factor	no	no	0.148	0.152	0.595	4e-11
Q8LC79	295	GATA transcription factor	no	no	0.136	0.145	0.651	5e-11
Q6DBP8	303	GATA transcription factor	no	no	0.148	0.155	0.595	5e-11
Q9LIB5	190	GATA transcription factor	no	no	0.129	0.215	0.682	7e-11

>sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=2 SV=1

 Score =  105 bits (262), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/308 (35%), Positives = 145/308 (47%), Gaps = 60/308 (19%)

Query: 49  FLNSSTQDQGMIKLEGSQQHD-----------QKRIAGGGSSDLQSSMSQPKTMTNKLAI 97
           FL +S QDQ  +    +  HD            K     G S     M   K    KL I
Sbjct: 63  FLINSRQDQVYVGYNNNTFHDVLDTHISQPLETKNFVSDGGSSSSDQMVPKKETRLKLTI 122

Query: 98  RRREVGEGST----SDNSSYTSSSSGESMSSKMRLANK---IINSSSVST--GTHDESVK 148
           ++++  +  T    S     T ++S + +SSK+RL  K   II +S  S     +D+S  
Sbjct: 123 KKKDNHQDQTDLPQSPIKDMTGTNSLKWISSKVRLMKKKKAIITTSDSSKQHTNNDQSSN 182

Query: 149 VAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQ 208
           ++        N E      N  N++  +RICSDCNTT TPLWRSGPRGPKSLCNACGIRQ
Sbjct: 183 LS--------NSERQ----NGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQ 230

Query: 209 RKARKAMQAAAE----SGTTTAKDNSS--------------FSKIKLQNNMEKKPRT--- 247
           RKAR+A  A A     SG +                      S + L+ N  K+  T   
Sbjct: 231 RKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMITLEE 290

Query: 248 SHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLM 307
           + +A+  + Q N+           S   + F D AL LS +SA +QVFP+D +EAAILLM
Sbjct: 291 TALAEDLETQSNST-------MLSSSDNIYFDDLALLLSKSSAYQQVFPQDEKEAAILLM 343

Query: 308 ELSCGFSH 315
            LS G  H
Sbjct: 344 ALSHGMVH 351

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
Arabidopsis thaliana (taxid: 3702)

>sp|Q5HZ36|GAT21_ARATH GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 32/169 (18%)

Query: 73  IAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYT---SSSSGESMSSKMRLA 129
           +A GGSS     + + +T   KL IR+++  +     + + T   S S    MS KMRL 
Sbjct: 96  VANGGSSACDHMVPKKETRL-KLTIRKKDHEDQPHPLHQNPTKPDSDSDKWLMSPKMRLI 154

Query: 130 NKIINSSS-----VSTGTHDESVKVA-------EKLLHEHDNI-------------EVHY 164
            K I ++       +   H ES           ++  HE  N              E  Y
Sbjct: 155 KKTITNNKQLIDQTNNNNHKESDHYPLNHKTNFDEDHHEDLNFKNVLTRKTTAATTENRY 214

Query: 165 FTTNS---SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
            T N    SN+N  +R+CSDCNTT TPLWRSGPRGPKSLCNACGIRQRK
Sbjct: 215 NTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 263

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC59|GAT23_ARATH GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 35/51 (68%)

Query: 164 YFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKA 214
           Y +        T+R CS+C TT TP+WR GP GPKSLCNACGIR RK R++
Sbjct: 13  YVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FJ10|GAT16_ARATH GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 36/47 (76%)

Query: 168 NSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKA 214
           N+++ N+  + C+DC T+ TPLWR GP GPKSLCNACGIR RK R+ 
Sbjct: 27  NNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRG 73

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LG10|GAT15_ARATH GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 40/58 (68%)

Query: 158 DNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAM 215
           D IE H  ++++   +N  + C+ C T+ TPLWR GP GPKSLCNACGIR RK R+ +
Sbjct: 22  DAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTL 79

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6QPM2|GAT19_ARATH GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2

 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 4/58 (6%)

Query: 173 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIR----QRKARKAMQAAAESGTTTA 226
           N   R C++C+TT+TPLWR+GPRGPKSLCNACGIR    +R+A  A  + +  G+T A
Sbjct: 71  NLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTARNSTSGGGSTAA 128

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VZP4|GAT10_ARATH GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 33/47 (70%)

Query: 166 TTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 212
           T  SS S+  VRIC+ C T TTP WR GP GPK+LCNACG+R +  R
Sbjct: 207 TLESSKSDGIVRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGR 253

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC79|GAT18_ARATH GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 35/43 (81%)

Query: 176 VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAA 218
            R C++C+TT+TPLWR+GPRGPKSLCNACGIR +K  +   AA
Sbjct: 151 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAA 193

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 33/47 (70%)

Query: 166 TTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 212
           T  +SNS+  VR C+ C TT TP WR GP GPK+LCNACG+R R  R
Sbjct: 209 TLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGR 255

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LIB5|GAT17_ARATH GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 174 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKA 214
           +T R C DC T  TPLWR GP GPKSLCNACGI+ RK R+A
Sbjct: 39  DTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQA 79

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
118487597	303	unknown [Populus trichocarpa]	0.930	0.970	0.449	1e-47
225429550	306	PREDICTED: putative GATA transcription f	0.920	0.950	0.410	2e-42
224088836	234	predicted protein [Populus trichocarpa]	0.724	0.978	0.475	6e-41
118489347	303	unknown [Populus trichocarpa x Populus d	0.933	0.973	0.447	9e-41
118488977	306	unknown [Populus trichocarpa x Populus d	0.939	0.970	0.443	1e-39
255550794	186	conserved hypothetical protein [Ricinus	0.582	0.989	0.538	1e-35
356554076	306	PREDICTED: putative GATA transcription f	0.664	0.686	0.449	2e-34
255546095	312	hypothetical protein RCOM_1046780 [Ricin	0.816	0.826	0.388	3e-32
147805325	211	hypothetical protein VITISV_032017 [Viti	0.632	0.947	0.432	2e-29
356556282	315	PREDICTED: putative GATA transcription f	0.607	0.609	0.409	1e-28

>gi|118487597|gb|ABK95624.1| unknown [Populus trichocarpa]

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 183/325 (56%), Gaps = 31/325 (9%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPI-FLNSSTQD-QG 58
           M P YLNPA   S PF       R+ Q LQ+  S   ++ A S+S P  F N+S  D Q 
Sbjct: 1   MTPAYLNPASS-SFPF----VDLREEQNLQLFLSP--HQAATSLSGPTNFFNTSAHDHQR 53

Query: 59  MIKLEGSQQHDQKR-----IAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSY 113
             K   S+QHD +      I+ GGSS    S  QP+   +        +      D +  
Sbjct: 54  ETKPGESRQHDNQEVDMYNISHGGSS----SSFQPEVNDHNYNSNFHNLSSSKMEDGAEE 109

Query: 114 TSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSN 173
           +  SS + M SKMRL  K+ NS+   T            +L  H+    +    +SSNSN
Sbjct: 110 SGESSVKWMPSKMRLMQKMTNSNCSETDHMPMKF-----MLKFHNQQYQNNEINSSSNSN 164

Query: 174 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK--ARKAMQAAAESGTTTAKDNSS 231
           + +R+CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRK     A  AAA +GT  A + SS
Sbjct: 165 SNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVIAIEASS 224

Query: 232 FSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSAL 291
            ++    NN  KK RT+HV+Q KK+        PP    +SQ+KLCFK+ ALSLS N AL
Sbjct: 225 STRSTKVNNKVKKSRTNHVSQNKKLS------KPPESSLQSQKKLCFKNLALSLSKNPAL 278

Query: 292 KQVFPRDVEEAAILLMELSCGFSHT 316
           +QV P DVEEAAILLMELSCGF H+
Sbjct: 279 QQVLPHDVEEAAILLMELSCGFIHS 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429550|ref|XP_002279283.1| PREDICTED: putative GATA transcription factor 22 [Vitis vinifera] gi|296081660|emb|CBI20665.3| unnamed protein product [Vitis vinifera]

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 182/331 (54%), Gaps = 40/331 (12%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPI--FLNSSTQDQ- 57
           M P++LN +   S PF   E  K DHQ  Q+L S++     AS S P   F NSSTQ Q 
Sbjct: 1   MTPVFLNTSS--SSPFPALEL-KEDHQHFQLLFSTNPPSYQASSSHPCPSFFNSSTQSQR 57

Query: 58  GMIKLEGSQQH---DQKRIAGGGSSDLQ----SSMSQPKTMTNK----LAIRRREVGEGS 106
           G       QQH   D K I+ GG  + Q    SS+ QP    NK    L++ ++E G+  
Sbjct: 58  GDHSPRDPQQHEDKDDKYISHGGCGESQVFSSSSLLQPMADDNKSSHKLSVFKKEEGDEG 117

Query: 107 TSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFT 166
                 +        MSSKMRL  K++NS   +        K+ +K+        ++ F 
Sbjct: 118 NKSTEKW--------MSSKMRLMRKMMNSDCTT-------AKIEQKVEDHQQWDNINEFN 162

Query: 167 TNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTA 226
           ++++ SN  +R+CSDCNTT TPLWRSGPRGPKSLCNACGIRQRKAR+AM AAA +     
Sbjct: 163 SSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAAANGT 222

Query: 227 KDNSSFSKIKLQ-NNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSL 285
              +  S +K++  N EKK  TS+V Q KK+               +++KLCF+DF  S+
Sbjct: 223 AVGTEISPMKMKLPNKEKKMHTSNVGQQKKLCKPP-------CPPPTEKKLCFEDFTSSI 275

Query: 286 SSNSALKQVFPRDVEEAAILLMELSCGFSHT 316
             NS  ++VFPRD EEAAILLM LSC   ++
Sbjct: 276 CKNSGFRRVFPRDEEEAAILLMALSCDLVYS 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088836|ref|XP_002308561.1| predicted protein [Populus trichocarpa] gi|222854537|gb|EEE92084.1| predicted protein [Populus trichocarpa]

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 146/246 (59%), Gaps = 17/246 (6%)

Query: 73  IAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKI 132
           I+ GGSS    S  QP+   +        +      D +  +  SS + M SKMRL  K+
Sbjct: 4   ISHGGSS----SSFQPEVNDHNYNSNFHNLSSSKMEDGAEESGESSVKWMPSKMRLMQKM 59

Query: 133 INSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRS 192
            NS+   T            +L  H+    +    +SSNSN+ +R+CSDCNTT+TPLWRS
Sbjct: 60  TNSNCSETDHMPMKF-----MLKFHNQQYQNNEINSSSNSNSNIRVCSDCNTTSTPLWRS 114

Query: 193 GPRGPKSLCNACGIRQRK--ARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHV 250
           GPRGPKSLCNACGIRQRK     A  AAA +GT  A + SS ++    NN  KK RT+HV
Sbjct: 115 GPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVIAIEASSSTRSTKVNNKVKKSRTNHV 174

Query: 251 AQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELS 310
           +Q KK+        PP    +SQ+KLCFK+ ALSLS N AL+QV P DVEEAAILLMELS
Sbjct: 175 SQNKKLS------KPPESSLQSQKKLCFKNLALSLSKNPALQQVLPHDVEEAAILLMELS 228

Query: 311 CGFSHT 316
           CGF H+
Sbjct: 229 CGFIHS 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489347|gb|ABK96478.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 145/324 (44%), Positives = 188/324 (58%), Gaps = 29/324 (8%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMI 60
           M P+YLNPA   S PF       ++ Q LQ+  S   ++ A S+S P    ++T DQ   
Sbjct: 1   MTPVYLNPASS-SFPF----VDLKEEQHLQLFLSP--HQAATSLSGPTNFFNTTHDQRES 53

Query: 61  KLEGSQQHD-----QKRIAGGGSSD---LQSSMSQPKTMTNKLAIRRREVGEGSTSDNSS 112
           KL  S+QHD     +  I+ G SSD     SS  QP    +       ++    T D + 
Sbjct: 54  KLAESRQHDDHEVDKYSISLGRSSDHKLFPSSSFQPVVNDDDDDSNFHKLFSSKTEDGTE 113

Query: 113 YTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNS 172
            +  SS   M S+M    ++ NS+        E+     K + +  N +       +S+S
Sbjct: 114 GSGDSSVNWMPSRMTTMQEMSNSN------RSETDHQPMKFMLKFHNQQCQN-NDINSSS 166

Query: 173 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSF 232
           N+ +R+CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRKAR+A  AAAE+G   + + SS 
Sbjct: 167 NSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRA-MAAAENGAVISVEASS- 224

Query: 233 SKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALK 292
           S     N+  KK RTSHV Q KK+  N P P+PP    +SQ+KLCFK+ ALSLS N AL+
Sbjct: 225 STKSKVNSKVKKLRTSHVVQGKKLS-NKP-PNPP---LQSQKKLCFKNLALSLSKNPALR 279

Query: 293 QVFPRDVEEAAILLMELSCGFSHT 316
           QV P DVEEAAILLMELSCGF H+
Sbjct: 280 QVLPHDVEEAAILLMELSCGFIHS 303

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488977|gb|ABK96296.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 188/325 (57%), Gaps = 28/325 (8%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMI 60
           M P+YLNPA   S PF       ++ Q LQ+  S   ++ A S+S P    ++T DQ   
Sbjct: 1   MTPVYLNPASS-SFPF----VDLKEEQHLQLFLSP--HQAATSLSGPTNFFNTTHDQRES 53

Query: 61  KLEGSQQHD-----QKRIAGGGSSD---LQSSMSQPKTMTNKLAIRR-REVGEGSTSDNS 111
           KL  S+QHD     +  I+ G SSD     SS  QP    +        ++    T D +
Sbjct: 54  KLAESRQHDDHEVDKYSISLGRSSDHKLFPSSSFQPVVNDDDDDDSNFHKLFSSKTEDGT 113

Query: 112 SYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSN 171
             +  SS   M S+M    ++  S+   + T  + +K   K    H+    +     +S+
Sbjct: 114 EGSGDSSVNWMPSRMTTMQEMTTSNR--SETDHQPMKFMLKF---HNQQCQNNVNDINSS 168

Query: 172 SNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSS 231
           SN+ +R+CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRKAR+A  AAAE+G   + + SS
Sbjct: 169 SNSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRA-MAAAENGAVISVEASS 227

Query: 232 FSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSAL 291
            S     N+  KK RTSHV Q KK+  N P P+PP    +SQ+KLCFK+ ALSLS N  L
Sbjct: 228 -STKSKVNSKVKKLRTSHVVQGKKLS-NKP-PNPP---LQSQKKLCFKNLALSLSKNPVL 281

Query: 292 KQVFPRDVEEAAILLMELSCGFSHT 316
           +QV P DVEEAAILLMELSCGF H+
Sbjct: 282 RQVLPHDVEEAAILLMELSCGFIHS 306

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550794|ref|XP_002516445.1| conserved hypothetical protein [Ricinus communis] gi|223544265|gb|EEF45786.1| conserved hypothetical protein [Ricinus communis]

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/195 (53%), Positives = 131/195 (67%), Gaps = 11/195 (5%)

Query: 122 MSSKMRLANKIINSSSVSTGTHDESVKVAEKLL-HEHDNIEVHYFTTNSSNSNNTVRICS 180
           M SKMR+  K++NS+      +D+ VK   K   H+      +   ++ SN NN +R+CS
Sbjct: 1   MPSKMRIMQKMMNSNCFEF--NDKPVKFTVKFQDHQQYQATNNEINSSCSNGNNNIRVCS 58

Query: 181 DCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNN 240
           DCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR+AM AAA     T+   +  +K+K    
Sbjct: 59  DCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAIAMETSSTKA--AKVK---- 112

Query: 241 MEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVE 300
            EKK RT H +Q KK+ C  PD  PP +    + K+ FK+ ALSLS+NSAL++VFP DVE
Sbjct: 113 -EKKSRTGHASQCKKL-CKPPDHPPPPYNQGQKPKVSFKNLALSLSNNSALQRVFPEDVE 170

Query: 301 EAAILLMELSCGFSH 315
           EAA LLMELSCGF H
Sbjct: 171 EAATLLMELSCGFIH 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554076|ref|XP_003545375.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/227 (44%), Positives = 135/227 (59%), Gaps = 17/227 (7%)

Query: 96  AIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLH 155
           A  RR +     S N+ +   S  + MSSKMRL  K++  S   + T D+++  + +   
Sbjct: 89  ACDRRNLPSEEESKNNDH--GSGNKWMSSKMRLMKKMMRPSI--SPTTDKAINSSPRF-Q 143

Query: 156 EHDNIEVHYFTTNSSNSNN---TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 212
            H  +E   ++  S  +NN   T R+CSDCNT+TTPLWR+GP+GPKSLCNACGIRQRKAR
Sbjct: 144 NHQGLESRRYSQRSPRNNNGSSTPRVCSDCNTSTTPLWRTGPKGPKSLCNACGIRQRKAR 203

Query: 213 KAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYK-KVQCNTPDPDPPHHEYR 271
           +AM  AA    T      +  K +L N  EKK R +H AQ+K K +  T           
Sbjct: 204 RAMAEAANGLVTPI----ACEKTRLHNK-EKKSRMNHFAQFKNKYKSTTTTTTTTVGSSE 258

Query: 272 SQRKL-CFKDFALSL-SSNSALKQVFPRD-VEEAAILLMELSCGFSH 315
             RKL  F +FA+SL S+NS  +Q+FPRD V EAA+LLM+LSCGF H
Sbjct: 259 GVRKLEYFNNFAISLRSNNSDFEQMFPRDEVAEAALLLMDLSCGFVH 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546095|ref|XP_002514107.1| hypothetical protein RCOM_1046780 [Ricinus communis] gi|223546563|gb|EEF48061.1| hypothetical protein RCOM_1046780 [Ricinus communis]

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 153/278 (55%), Gaps = 20/278 (7%)

Query: 47  PIFLNSSTQDQGMIKLEGSQQHDQKR---IAGGGSSDLQSSMSQPKTMTNKLAIRRREVG 103
           PIF+N   ++ G    E    H Q+     A  G S     +        +L++ ++E  
Sbjct: 45  PIFINPPQEEVGYYHKELQPLHHQEVDNIYASHGRSWDHRIIKNENENGQELSVCKKEDK 104

Query: 104 EGSTSDNSSYTSSSSGESMSSKMRLANKIINSS-SVSTGTHDESV-KVAEKLLHEHDNIE 161
             S  D      +SS + MSSKMRL  K++ +  +V+T  H  S+ K+ +K       ++
Sbjct: 105 STSIEDQRD---NSSVKWMSSKMRLMRKMMTTDQTVNTTQHTSSMHKLEDKEKSRSLPLQ 161

Query: 162 VHYFTTN-SSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGI--RQRKARKAMQAA 218
             Y + N S NSNNT+R+CSDCNTT TPLWRSGPRGPKSLCNACGI  R+ +   A   A
Sbjct: 162 DDYSSKNLSDNSNNTIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRALAAAQA 221

Query: 219 AESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCF 278
           + +GT  A D ++    K+QN  EK+   SH+   K+ +              S++KLCF
Sbjct: 222 SANGTIFAPDTAAMKTNKVQNK-EKRTNNSHLPFKKRCKFTA-------QSRGSRKKLCF 273

Query: 279 KDFALS-LSSNSALKQVFPRDVEEAAILLMELSCGFSH 315
           +D + + LS NSA +Q+FP+D +EAAILLM LS G  H
Sbjct: 274 EDLSSTILSKNSAFQQLFPQDEKEAAILLMALSYGLVH 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147805325|emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/229 (43%), Positives = 135/229 (58%), Gaps = 29/229 (12%)

Query: 92  TNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAE 151
           ++KL++ ++E G+        +        MSSKMRL  K++NS   +        K+ +
Sbjct: 8   SHKLSVFKKEEGDEGNKSTEKW--------MSSKMRLMRKMMNSDCTT-------AKIEQ 52

Query: 152 KLLHEHDNIEVHYFTTNSSNSNNT-VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
           K+  +H   +      +S+N++N  +R+CSDCNTT TPLWRSGPRGPKSLCNACGIRQRK
Sbjct: 53  KV-EDHQQWDNINEXNSSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 111

Query: 211 ---ARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPH 267
              A  A  AAA +GT    + S   K+KL N  EKK  TS+V Q KK+         P 
Sbjct: 112 ARRAMAAAAAAAANGTAVGTEISPM-KMKLPNK-EKKMHTSNVGQQKKLC-------KPP 162

Query: 268 HEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT 316
               +++KLCF+DF  S+  NS  ++VFPRD EEAAILLM LSC   ++
Sbjct: 163 CPPPTEKKLCFEDFTSSICKNSGFRRVFPRDEEEAAILLMALSCDLVYS 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556282|ref|XP_003546455.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 119/205 (58%), Gaps = 13/205 (6%)

Query: 118 SGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNN--- 174
           S + M  KMR+  +++ S    +   +  +  ++K+ +E  N  +    T+ SN N+   
Sbjct: 108 STKWMPLKMRMMRRLMVSDQTGSDDTEGMISNSQKIKYEEKNSPLSPLGTDDSNYNSSSN 167

Query: 175 ----TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNS 230
               TVR+CSDC+TT TPLWRSGP+GPKSLCNACGIRQRK R+A+ AAA S  T   + +
Sbjct: 168 HSNITVRVCSDCHTTKTPLWRSGPKGPKSLCNACGIRQRKVRRAIAAAATSNGTNPVE-A 226

Query: 231 SFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSA 290
             S++K  N +  K   S     ++++ N          YR +R   F+D  + LS N A
Sbjct: 227 EKSQVKKGNTLHSKGMKSKTEGAQQMKKNR----KLGARYR-KRFGAFEDLTVRLSKNFA 281

Query: 291 LKQVFPRDVEEAAILLMELSCGFSH 315
           L+QVFP+D +EAAILLM LS G  H
Sbjct: 282 LQQVFPQDEKEAAILLMALSYGLLH 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
TAIR|locus:2120845	352	CGA1 "cytokinin-responsive gat	0.443	0.397	0.415	7.1e-25
TAIR|locus:2170277	398	GNC "GATA, nitrate-inducible,	0.098	0.077	0.903	2.1e-22
TAIR|locus:2148558	120	GATA23 "GATA transcription fac	0.098	0.258	0.741	9.5e-14
TAIR|locus:2155919	139	GATA16 "GATA transcription fac	0.094	0.215	0.733	1.2e-11
TAIR|locus:2083388	149	GATA15 "GATA transcription fac	0.177	0.375	0.482	1.8e-11
TAIR|locus:2093678	190	GATA17 "GATA transcription fac	0.417	0.694	0.326	8.9e-11
TAIR|locus:504955441	197	AT4G16141 [Arabidopsis thalian	0.094	0.152	0.733	1.8e-10
TAIR|locus:2115195	211	GATA19 "GATA transcription fac	0.094	0.142	0.8	2.3e-09
TAIR|locus:2077932	295	MNP "MONOPOLE" [Arabidopsis th	0.294	0.315	0.356	2.6e-09
TAIR|locus:2062095	208	GATA20 "GATA transcription fac	0.094	0.144	0.766	8.1e-09

TAIR|locus:2120845 CGA1 "cytokinin-responsive gata factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
 Identities = 64/154 (41%), Positives = 78/154 (50%)

Query:   176 VRICSDCNTTTTPLWRSGPRGPKSLCNACGI----XXXXXXXXXXXXXESGTTTAKDNSS 231
             +RICSDCNTT TPLWRSGPRGPKSLCNACGI                  SG +       
Sbjct:   198 IRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKK 257

Query:   232 F-SKIKLQNNMEK--KPRTSHVAQYKKV-----QCNTPDPDPPHHE--YRSQRKLCFKDF 281
               +K K+ N + K   P    V   K++          D +   +     S   + F D 
Sbjct:   258 MQNKNKISNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYFDDL 317

Query:   282 ALSLSSNSALKQVFPRDVEEAAILLMELSCGFSH 315
             AL LS +SA +QVFP+D +EAAILLM LS G  H
Sbjct:   318 ALLLSKSSAYQQVFPQDEKEAAILLMALSHGMVH 351

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=IEP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010187 "negative regulation of seed germination" evidence=IEP

GO:0010380 "regulation of chlorophyll biosynthetic process" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2170277 GNC "GATA, nitrate-inducible, carbon metabolism-involved" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
 Identities = 28/31 (90%), Positives = 30/31 (96%)

Query:   176 VRICSDCNTTTTPLWRSGPRGPKSLCNACGI 206
             +R+CSDCNTT TPLWRSGPRGPKSLCNACGI
Sbjct:   229 IRVCSDCNTTKTPLWRSGPRGPKSLCNACGI 259

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010255 "glucose mediated signaling pathway" evidence=IMP

GO:0051171 "regulation of nitrogen compound metabolic process" evidence=IEP;IMP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=IEP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010187 "negative regulation of seed germination" evidence=IEP

GO:0010380 "regulation of chlorophyll biosynthetic process" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2148558 GATA23 "GATA transcription factor 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   176 VRICSDCNTTTTPLWRSGPRGPKSLCNACGI 206
             +R CS+C TT TP+WR GP GPKSLCNACGI
Sbjct:    25 IRCCSECKTTKTPMWRGGPTGPKSLCNACGI 55

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

GO:0048527 "lateral root development" evidence=IMP

TAIR|locus:2155919 GATA16 "GATA transcription factor 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query:   177 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 206
             + C+DC T+ TPLWR GP GPKSLCNACGI
Sbjct:    36 KTCADCGTSKTPLWRGGPVGPKSLCNACGI 65

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2083388 GATA15 "GATA transcription factor 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
 Identities = 27/56 (48%), Positives = 30/56 (53%)

Query:   151 EKLLHEHDNIEVHYFXXXXXXXXXXVRICSDCNTTTTPLWRSGPRGPKSLCNACGI 206
             E  L   D IE H             + C+ C T+ TPLWR GP GPKSLCNACGI
Sbjct:    15 ESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGI 70

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2093678 GATA17 "GATA transcription factor 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 8.9e-11, P = 8.9e-11
 Identities = 48/147 (32%), Positives = 65/147 (44%)

Query:   177 RICSDCNTTTTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXX-XESGTTTAKDNSSFSKI 235
             R C DC T  TPLWR GP GPKSLCNACGI              E      K N + + +
Sbjct:    42 RTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCN-NDL 100

Query:   236 KLQNNMEKKPRTSHVAQYK-------KVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSN 288
              L +   KK + + V   K       K+ CN           +   K     F + +   
Sbjct:   101 NLDHRNAKKYKINIVDDGKIDIDDDPKI-CNNKRSSSSSSN-KGVSKFLDLGFKVPVMKR 158

Query:   289 SAL--KQVFPR--DVEEAAILLMELSC 311
             SA+  K+++ +  + E AA+LLM LSC
Sbjct:   159 SAVEKKRLWRKLGEEERAAVLLMALSC 185

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:504955441 AT4G16141 [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 22/30 (73%), Positives = 24/30 (80%)

Query:   177 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 206
             + C DC T+ TPLWR GP GPKSLCNACGI
Sbjct:    37 KTCVDCGTSRTPLWRGGPAGPKSLCNACGI 66

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2115195 GATA19 "GATA transcription factor 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 24/30 (80%), Positives = 29/30 (96%)

Query:   177 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 206
             R C++C+TT+TPLWR+GPRGPKSLCNACGI
Sbjct:    75 RRCANCDTTSTPLWRNGPRGPKSLCNACGI 104

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2077932 MNP "MONOPOLE" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 36/101 (35%), Positives = 50/101 (49%)

Query:   177 RICSDCNTTTTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXXXESGTTTAKDNSSFSKIK 236
             R C++C+TT+TPLWR+GPRGPKSLCNACGI             E  TT A  N+      
Sbjct:   152 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--------ERRTTAATGNTVVGAAP 203

Query:   237 LQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLC 277
             +Q +      + +   +     N  +  P  H + +QR  C
Sbjct:   204 VQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHSTQRVPC 244

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IEP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009909 "regulation of flower development" evidence=IGI

GO:0009790 "embryo development" evidence=IMP

GO:0048446 "petal morphogenesis" evidence=RCA

TAIR|locus:2062095 GATA20 "GATA transcription factor 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 8.1e-09, P = 8.1e-09
 Identities = 23/30 (76%), Positives = 28/30 (93%)

Query:   177 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 206
             R C+ C+TT+TPLWR+GP+GPKSLCNACGI
Sbjct:    92 RRCASCDTTSTPLWRNGPKGPKSLCNACGI 121

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0013019801 SubName- Full=Putative uncharacterized protein; (234 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	316
smart00401	52	smart00401, ZnF_GATA, zinc finger binding to DNA c	8e-17
pfam00320	36	pfam00320, GATA, GATA zinc finger	5e-16
cd00202	54	cd00202, ZnF_GATA, Zinc finger DNA binding domain;	5e-13

>gnl|CDD|214648 smart00401, ZnF_GATA, zinc finger binding to DNA consensus sequence [AT]GATA[AG]

 Score = 72.8 bits (179), Expect = 8e-17
 Identities = 22/45 (48%), Positives = 28/45 (62%)

Query: 174 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAA 218
            + R CS+C TT TPLWR GP G K+LCNACG+  +K     +  
Sbjct: 1   GSGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGLKRPL 45

Length = 52

>gnl|CDD|109380 pfam00320, GATA, GATA zinc finger

 Score = 70.0 bits (172), Expect = 5e-16
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 179 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK 213
           CS+C TT TPLWR GP G ++LCNACG+  RK   
Sbjct: 1   CSNCGTTKTPLWRRGPDGNRTLCNACGLYYRKHGL 35

This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. Length = 36

>gnl|CDD|238123 cd00202, ZnF_GATA, Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

 Score = 62.4 bits (152), Expect = 5e-13
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 178 ICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
            CS+C TTTTPLWR GP G  +LCNACG+  +K
Sbjct: 1   ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKK 33

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
cd00202	54	ZnF_GATA Zinc finger DNA binding domain; binds spe	99.41
smart00401	52	ZnF_GATA zinc finger binding to DNA consensus sequ	99.35
PF00320	36	GATA: GATA zinc finger; InterPro: IPR000679 Zinc f	99.35
KOG1601	340	consensus GATA-4/5/6 transcription factors [Transc	98.54
COG5641	498	GAT1 GATA Zn-finger-containing transcription facto	97.85
KOG3554	693	consensus Histone deacetylase complex, MTA1 compon	83.05

>cd00202 ZnF_GATA Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

Probab=99.41  E-value=1.4e-13  Score=101.82  Aligned_cols=35  Identities=60%  Similarity=1.237  Sum_probs=32.8

Q ss_pred             ccccCCCCCCCccccCCCCCCccchhHhHHHHhhh
Q 021178          178 ICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  212 (316)
Q Consensus       178 ~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~  212 (316)
                      .|++|++++||+||+||.|...|||||||||++..
T Consensus         1 ~C~~C~~~~Tp~WR~g~~~~~~LCNaCgl~~~k~~   35 (54)
T cd00202           1 ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHG   35 (54)
T ss_pred             CCCCCCCCCCcccccCCCCcchHHHHHHHHHHhcC
Confidence            59999999999999999888999999999998875

>smart00401 ZnF_GATA zinc finger binding to DNA consensus sequence [AT]GATA[AG]

Probab=99.35  E-value=3.6e-13  Score=98.61  Aligned_cols=39  Identities=56%  Similarity=1.136  Sum_probs=35.6

Q ss_pred             CCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhhh
Q 021178          175 TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  213 (316)
Q Consensus       175 ~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k  213 (316)
                      ..+.|++|++++||+||+||.|...|||||||||++...
T Consensus         2 ~~~~C~~C~~~~T~~WR~g~~g~~~LCnaCgl~~~k~~~   40 (52)
T smart00401        2 SGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGG   40 (52)
T ss_pred             CCCCcCCCCCCCCCccccCCCCCCcEeecccHHHHHcCC
Confidence            468899999999999999999987999999999988754

>PF00320 GATA: GATA zinc finger; InterPro: IPR000679 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.35  E-value=1.9e-13  Score=93.29  Aligned_cols=34  Identities=56%  Similarity=1.235  Sum_probs=27.2

Q ss_pred             cccCCCCCCCccccCCCCCCccchhHhHHHHhhh
Q 021178          179 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  212 (316)
Q Consensus       179 CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~  212 (316)
                      |++|++++||+||++|.|...|||||||+|++.+
T Consensus         1 C~~C~tt~t~~WR~~~~g~~~LCn~Cg~~~kk~~   34 (36)
T PF00320_consen    1 CSNCGTTETPQWRRGPNGNRTLCNACGLYYKKYG   34 (36)
T ss_dssp             -TTT--ST-SSEEEETTSEE-EEHHHHHHHHHHS
T ss_pred             CcCCcCCCCchhhcCCCCCCHHHHHHHHHHHHhC
Confidence            8999999999999999997779999999998864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents GATA-type zinc fingers (Znf). A number of transcription factors (including erythroid-specific transcription factor and nitrogen regulatory proteins), specifically bind the DNA sequence (A/T)GATA(A/G) [] in the regulatory regions of genes. They are consequently termed GATA-binding transcription factors. The interactions occur via highly-conserved Znf domains in which the zinc ion is coordinated by 4 cysteine residues [, ]. NMR studies have shown the core of the Znf to comprise 2 irregular anti-parallel beta-sheets and an alpha-helix, followed by a long loop to the C-terminal end of the finger. The N-terminal part, which includes the helix, is similar in structure, but not sequence, to the N-terminal zinc module of the glucocorticoid receptor DNA-binding domain. The helix and the loop connecting the 2 beta-sheets interact with the major groove of the DNA, while the C-terminal tail wraps around into the minor groove. It is this tail that is the essential determinant of specific binding. Interactions between the Znf and DNA are mainly hydrophobic, explaining the preponderance of thymines in the binding site; a large number of interactions with the phosphate backbone have also been observed []. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0008270 zinc ion binding, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 3GAT_A 2GAT_A 1GAU_A 1GAT_A 1Y0J_A 1GNF_A 2L6Z_A 2L6Y_A 3DFV_D 3DFX_B ....

>KOG1601 consensus GATA-4/5/6 transcription factors [Transcription]

Probab=98.54  E-value=3.4e-08  Score=84.28  Aligned_cols=37  Identities=68%  Similarity=1.399  Sum_probs=34.8

Q ss_pred             CcccccCCCCCCCccccCCCCCCccchhHhHHHHhhh
Q 021178          176 VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  212 (316)
Q Consensus       176 ~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~  212 (316)
                      ...|.+|+++.||+||+++.|+..+|||||++|++..
T Consensus       199 ~~~c~~~~~~~t~~~r~~~~g~~~~cnacgl~~k~~~  235 (340)
T KOG1601|consen  199 LRQCSNCGTTKTPLWRRGPEGPKSLCNACGLRYKKGG  235 (340)
T ss_pred             CcccCCCCCCCCcceecCCCCCccccccchhhhhhcC
Confidence            6899999999999999999998899999999998874

>COG5641 GAT1 GATA Zn-finger-containing transcription factor [Transcription]

Probab=97.85  E-value=6.6e-06  Score=83.99  Aligned_cols=40  Identities=45%  Similarity=1.004  Sum_probs=33.9

Q ss_pred             CCCcccccCCCCCCCccccCCC-----CCCccchhHhHHHHhhhhh
Q 021178          174 NTVRICSDCNTTTTPLWRSGPR-----GPKSLCNACGIRQRKARKA  214 (316)
Q Consensus       174 ~~~~~CsnC~Tt~TPlWRrGP~-----G~~~LCNACGL~~rk~~k~  214 (316)
                      ....+|.||.|+.||+|||+..     | -+|||||||+++.+...
T Consensus       156 ~~~~vc~Nc~t~stPlwrR~~~~~s~~~-n~lcnaCgl~~klhg~~  200 (498)
T COG5641         156 NQPHVCSNCKTTSTPLWRRASSESSLPG-NNLCNACGLYLKLHGSP  200 (498)
T ss_pred             cccchhccccccCCccccccccccccCC-ccccccccccccccCCc
Confidence            3445999999999999999999     6 68999999999766543

>KOG3554 consensus Histone deacetylase complex, MTA1 component [Chromatin structure and dynamics]

Probab=83.05  E-value=1.2  Score=46.75  Aligned_cols=40  Identities=30%  Similarity=0.530  Sum_probs=31.6

Q ss_pred             CCCcccccCCCCCCCccc--cCCCCCCccchhHhHHHHhhhh
Q 021178          174 NTVRICSDCNTTTTPLWR--SGPRGPKSLCNACGIRQRKARK  213 (316)
Q Consensus       174 ~~~~~CsnC~Tt~TPlWR--rGP~G~~~LCNACGL~~rk~~k  213 (316)
                      ..++.|.+|+|++.-+|-  -+|+-...||-.|=+||+|...
T Consensus       384 ~~g~~CEsC~ttqs~qWYsWGppnmqcrLCasCWiyWKKygG  425 (693)
T KOG3554|consen  384 QDGRACESCYTTQSLQWYSWGPPNMQCRLCASCWIYWKKYGG  425 (693)
T ss_pred             CCCCcccccccccccceeccCCCCccchhhHHHHHHHHHhcC
Confidence            347899999999999993  3444445699999999998743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	316
2vus_I	43	Crystal Structure Of Unliganded Nmra-Area Zinc Fing		3e-04

>pdb|2VUS|I Chain I, Crystal Structure Of Unliganded Nmra-Area Zinc Finger Complex Length = 43

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 179 CSDCNTTTTPLWRSGPRGPKSLCNACGI 206
           C++C T TTPLWR  P G + LCNACG+
Sbjct: 4   CTNCFTQTTPLWRRNPEG-QPLCNACGL 30

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	2e-13
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	1e-12
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	5e-11
3dfx_A	63	Trans-acting T-cell-specific transcription factor	4e-09
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	7e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans} Length = 71

 Score = 63.7 bits (155), Expect = 2e-13
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 170 SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
           S+ N     CS+C+ T T  WR+        CNAC I QRK
Sbjct: 2   SHMNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRK 42

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A Length = 46

 Score = 60.9 bits (148), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 177 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
           R C +C  T TPLWR    G   LCNACG+  + 
Sbjct: 5   RECVNCGATATPLWRRDRTG-HYLCNACGLYHKM 37

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I* Length = 43

 Score = 55.9 bits (135), Expect = 5e-11
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 177 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
             C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 2   TTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 34

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* Length = 63

 Score = 51.2 bits (122), Expect = 4e-09
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 170 SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
           S +      C++C TTTT LWR    G   +CNACG+  + 
Sbjct: 1   SAARRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKL 40

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A* Length = 66

 Score = 50.8 bits (121), Expect = 7e-09
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 170 SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
           +   N    C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 3   NGEQNGPTTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 42

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 6e-04
 Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 15/106 (14%)

Query: 205 GIRQRKARKAMQAAAESGTTTAKDNSSF--SKIKLQNNMEKKPRTSHVAQYKKVQCNTPD 262
                K  + +Q   E      + N  F  S IK +          ++ Q  ++  N   
Sbjct: 69  WTLLSKQEEMVQKFVEEVL---RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL-YNDNQ 124

Query: 263 PDPPHHEYRSQRKLCFKDFALSLSSNSAL---------KQVFPRDV 299
               ++  R Q  L  +   L L     +         K     DV
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 8e-04
 Identities = 53/373 (14%), Positives = 98/373 (26%), Gaps = 147/373 (39%)

Query: 15  PFRLAEA---QKRDHQRLQVLHSSSHNR--------PAASVSRPIFLNS------STQDQ 57
            F L      ++R    +  ++    +R           +VSR              +  
Sbjct: 92  KF-LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA 150

Query: 58  GMIKLEGSQQHDQKRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYTSSS 117
             + ++G        + G G + +                   +V               
Sbjct: 151 KNVLIDG--------VLGSGKTWVALD-----------VCLSYKV--------------- 176

Query: 118 SGESMSSKMRLANKI--INSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNNT 175
                  + ++  KI  +N  + ++   +  +++ +KLL++ D      +T+ S +S+N 
Sbjct: 177 -------QCKMDFKIFWLNLKNCNS--PETVLEMLQKLLYQID----PNWTSRSDHSSNI 223

Query: 176 VRICSDCNTTTTPLWRSGPRGPKSL------CNA---------CGI----RQRKARKAMQ 216
                        L +S       L       NA         C I    R ++    + 
Sbjct: 224 KLRIHSIQAELRRLLKS-KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS 282

Query: 217 AAAES---------GTTTAKDNSSFSKIKLQNNMEKKPR--------------------T 247
           AA  +           T  +  S   K  L    +  PR                     
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKY-LDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 248 SHVAQYKKVQC-----------NTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFP 296
           +    +K V C           N  +P     EYR      F   +           VFP
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPA----EYRK----MFDRLS-----------VFP 382

Query: 297 RDVEEAAILLMEL 309
                  ILL  +
Sbjct: 383 PSAHIPTILLSLI 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
3dfx_A	63	Trans-acting T-cell-specific transcription factor	99.7
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	99.62
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	99.52
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	99.51
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	99.49
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.47
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.15

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*

Probab=99.70  E-value=9.8e-18  Score=126.93  Aligned_cols=60  Identities=30%  Similarity=0.582  Sum_probs=48.9

Q ss_pred             CCCCCCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhhhhhHHHhhcCcccccCCCccccccc
Q 021178          171 NSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKL  237 (316)
Q Consensus       171 ~~~~~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k~~~aa~~ng~~~kke~~qstR~K~  237 (316)
                      ++......|++|++++||+||+||+|+ +|||||||||++++.      .++..+.+++++++++|+
T Consensus         2 ~~~~~~~~C~~C~tt~Tp~WR~gp~G~-~LCNACGl~~~~~~~------~RP~~~~~~~i~~R~Rk~   61 (63)
T 3dfx_A            2 AARRAGTSCANCQTTTTTLWRRNANGD-PVCNACGLYYKLHNI------NRPLTMKKEGIQTRNRKM   61 (63)
T ss_dssp             CCCCTTCCCTTTCCSCCSSCCCCTTSC-CCCHHHHHHHHHHSS------CCCGGGCCSSCCCCC---
T ss_pred             CCCCCCCcCCCcCCCCCCccCCCCCCC-chhhHHHHHHHHcCC------CCCcCcCCCccccccCCC
Confidence            346678899999999999999999996 999999999988754      367788888887766554

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*

Probab=99.62  E-value=1.5e-16  Score=121.19  Aligned_cols=55  Identities=35%  Similarity=0.639  Sum_probs=45.3

Q ss_pred             CCCCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhhhhhHHHhhcCcccccCCCcccc
Q 021178          173 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSK  234 (316)
Q Consensus       173 ~~~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k~~~aa~~ng~~~kke~~qstR  234 (316)
                      .+..+.|++|++++||+||+||+|. +|||||||||+++..      .++..++++.|+.++
T Consensus         6 ~~~~~~C~~C~t~~Tp~WR~gp~G~-~LCNaCGl~~~~~~~------~RP~~~k~~~ik~R~   60 (66)
T 4gat_A            6 QNGPTTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGV------VRPLSLKTDVIKKRN   60 (66)
T ss_dssp             SSSSCCCTTTCCCCCSSCEEETTTE-EECHHHHHHHHHHCS------CCCGGGCCSCCCCCC
T ss_pred             CCCCCCCCCCCCCCCCcCCcCCCCC-CccHHHHHHHHHcCC------CCchhhccccccccc
Confidence            4678999999999999999999995 999999999988654      366777776665443

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}

Probab=99.52  E-value=1.4e-15  Score=117.50  Aligned_cols=42  Identities=40%  Similarity=0.570  Sum_probs=32.3

Q ss_pred             CCCCCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhhh
Q 021178          172 SNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  213 (316)
Q Consensus       172 ~~~~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k  213 (316)
                      .......|+||+|++||+||+|+.+..+|||||||||+++..
T Consensus         4 ~~~~~~~C~nC~tt~Tp~WRrg~~~~g~LCNACGl~~~~~~~   45 (71)
T 2kae_A            4 MNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNK   45 (71)
T ss_dssp             ----CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHHHHHHHS
T ss_pred             CCCCCCcCCccCCCCCCccccCCCCCCccchHHHHHHHHhCC
Confidence            356788999999999999999544334899999999988754

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*

Probab=99.51  E-value=5.3e-15  Score=104.41  Aligned_cols=36  Identities=47%  Similarity=1.024  Sum_probs=33.0

Q ss_pred             cccccCCCCCCCccccCCCCCCccchhHhHHHHhhhh
Q 021178          177 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  213 (316)
Q Consensus       177 ~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k  213 (316)
                      +.|++|++++||+||+||+|. +|||||||||++++.
T Consensus         2 ~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~   37 (43)
T 2vut_I            2 TTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGV   37 (43)
T ss_dssp             CCCSSSCCCCCSCCEECTTSC-EECHHHHHHHHHHSS
T ss_pred             CcCCccCCCCCCccccCCCCC-cccHHHHHHHHHhCC
Confidence            579999999999999999996 999999999988754

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A

Probab=99.49  E-value=1.2e-14  Score=104.00  Aligned_cols=38  Identities=42%  Similarity=0.957  Sum_probs=34.3

Q ss_pred             CCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhhh
Q 021178          175 TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  213 (316)
Q Consensus       175 ~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k  213 (316)
                      ..+.|++|++++||+||+||+|. +|||||||||+++..
T Consensus         3 ~~~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~   40 (46)
T 1gnf_A            3 EARECVNCGATATPLWRRDRTGH-YLCNACGLYHKMNGQ   40 (46)
T ss_dssp             CSCCCTTTCCCCCSSCBCCTTCC-CBCSHHHHHHHHTCS
T ss_pred             CCCCCCCcCCCCCCcCccCCCCC-ccchHHHHHHHHcCC
Confidence            46789999999999999999995 999999999988643

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.47  E-value=2.5e-14  Score=118.54  Aligned_cols=57  Identities=32%  Similarity=0.592  Sum_probs=47.3

Q ss_pred             CCCCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhhhhhHHHhhcCcccccCCCcccccc
Q 021178          173 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIK  236 (316)
Q Consensus       173 ~~~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k~~~aa~~ng~~~kke~~qstR~K  236 (316)
                      ......|++|+|+.||+||+||+| ++|||||||||+++...      ++..++++.|+.+++|
T Consensus        56 ~~~~~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~~~~~~------rp~~~~~~~i~~r~r~  112 (115)
T 4hc9_A           56 RRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKLHNIN------RPLTMKKEGIQTRNRK  112 (115)
T ss_dssp             CCTTCCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHSSC------CCGGGCCSSCCCCC--
T ss_pred             ccccccCCCcCCCCcceeEECCCC-CCcchHHHHHHHHhCCC------CCccccccchhhcccc
Confidence            456789999999999999999999 89999999999887543      6788888877765544

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.15  E-value=1.7e-11  Score=101.59  Aligned_cols=38  Identities=42%  Similarity=0.937  Sum_probs=32.5

Q ss_pred             CCCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhh
Q 021178          174 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  212 (316)
Q Consensus       174 ~~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~  212 (316)
                      ...+.|+||++++||+||+|++| .+|||||||||+.+.
T Consensus         3 ~~~~~C~~Cg~~~Tp~WRr~~~g-~~lCnaCgl~~Kl~G   40 (115)
T 4hc9_A            3 HMGRECVNCGATSTPLWRRDGTG-HYLCNACGLYHKMNG   40 (115)
T ss_dssp             ---CCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCccCCcceECCCC-CCcCcchhhhhhhcc
Confidence            35789999999999999999999 799999999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	316
d1y0ja1	39	g.39.1.1 (A:200-238) Erythroid transcription facto	1e-12
d2vuti1	42	g.39.1.1 (I:671-712) Erythroid transcription facto	4e-10
d3gata_	66	g.39.1.1 (A:) Erythroid transcription factor GATA-	5e-08

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 39

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.3 bits (144), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 177 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
           R C +C  T TPLWR    G   LCNACG+  + 
Sbjct: 3   RECVNCGATATPLWRRDRTG-HYLCNACGLYHKM 35

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]} Length = 42

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

 Score = 52.5 bits (126), Expect = 4e-10
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 179 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
           C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 3   CTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 33

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 66

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 46.9 bits (111), Expect = 5e-08
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 177 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 210
            +CS+C T+TT LWR  P G   +CNACG+  + 
Sbjct: 5   TVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKL 37

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d3gata_	66	Erythroid transcription factor GATA-1 {Chicken (Ga	99.69
d1y0ja1	39	Erythroid transcription factor GATA-1 {Mouse (Mus	99.58
d2vuti1	42	Erythroid transcription factor GATA-1 {Emericella	99.58

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.69  E-value=5.5e-18  Score=127.62  Aligned_cols=60  Identities=33%  Similarity=0.664  Sum_probs=48.5

Q ss_pred             CCCcccccCCCCCCCccccCCCCCCccchhHhHHHHhhhhhhHHHhhcCcccccCCCccccccccCC
Q 021178          174 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNN  240 (316)
Q Consensus       174 ~~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k~~~aa~~ng~~~kke~~qstR~K~~~~  240 (316)
                      ..+.+|+||+|++||+||+||.| .+|||||||||+++..      .++..+.++.++.+++++...
T Consensus         2 r~g~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl~~~~~~~------~RP~~~~~~~i~~r~r~~~~~   61 (66)
T d3gata_           2 RAGTVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV------NRPLTMRKDGIQTRNRKVSSK   61 (66)
T ss_dssp             CTTCCCTTTCCCCCSSEEECTTS-CEEEHHHHHHHHHHCS------CCCGGGCCSSCCCCSCCCCCC
T ss_pred             CCCCCCCCCCCCCCcccccCCCC-CcccchhHHHHHHhCC------cCCccccccccccccCCCCCc
Confidence            35678999999999999999999 7999999999988643      366777788887766555433

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=1.8e-16  Score=108.70  Aligned_cols=36  Identities=44%  Similarity=1.013  Sum_probs=33.1

Q ss_pred             CcccccCCCCCCCccccCCCCCCccchhHhHHHHhhh
Q 021178          176 VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  212 (316)
Q Consensus       176 ~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~  212 (316)
                      .++|++|++++||+||+||.| .+|||||||||+.+.
T Consensus         2 ~r~C~~Cgtt~Tp~WR~gp~G-~~LCNACGl~~r~~G   37 (39)
T d1y0ja1           2 ARECVNCGATATPLWRRDRTG-HYLCNACGLYHKMNG   37 (39)
T ss_dssp             CCCCSSSCCCCCSCCEECTTS-CEECSSHHHHHHHSC
T ss_pred             cCCCCCCCCCCCcccccCCCC-CEeeHHhHHHHHHhC
Confidence            578999999999999999999 689999999998763

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

Probab=99.58  E-value=2.4e-16  Score=109.53  Aligned_cols=35  Identities=49%  Similarity=1.071  Sum_probs=32.1

Q ss_pred             ccccCCCCCCCccccCCCCCCccchhHhHHHHhhhh
Q 021178          178 ICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  213 (316)
Q Consensus       178 ~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~rk~~k  213 (316)
                      .|+||++++||+||+||+| ++|||||||||+++..
T Consensus         2 ~C~nC~tt~Tp~WRr~~~G-~~lCNACGl~~k~~g~   36 (42)
T d2vuti1           2 TCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKLHGV   36 (42)
T ss_dssp             CCSSSCCCCCSCCEECTTS-CEECHHHHHHHHHHSS
T ss_pred             cCCCCCCCCCccceeCCCC-CCchhhhhHHHHHcCC
Confidence            6999999999999999999 7999999999977643