Citrus Sinensis ID: 021216

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
MDVGVVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAEGLNVLKGVLDGN
cccccEEEccccccccccccEEEEEEEEEcccccccccEEEEcccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEcccEEEEcccccccccHHHHHHHHHcccEEEEcccccHHHHHHHcccccccccccccccccccccEEEEEcccccEEEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHccc
cccccccccccccccccccEEEEcccccccccccHHccHEEEcccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEcccEEEEcccccccccHHHHHHHHHcccEEEccccccEEEHHHHcccccccccccccccccccccEEEEEEccccEEEEEEccccHEccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccHccccccHHHHHHHHHHHccc
mdvgvvnktssdekseflpvlrsgscaeigpkqymedeHICIDNltdhlgtaadfpvpgafygvfdghggtdAALYVRANILRFIvedshfpiCVEKAIKSAFVRadyafadnssldissgTTALTALIFGRNLIIANAGDCRAVLGRRgraiemskdhkpnctseRLRIEKLGGVVYDGYLNGQLSVARAlgdwhmkspkgsacplsaepelqetllteddefLIMGCDGLWDVMSSQGAVTVARKELMlhndpercSRELVREALKRNTCDNLTVIVIcfspdpppriemppsrvrrSISAEGLNVLKGVLDGN
mdvgvvnktssdekseflpvlrsgscAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFAdnssldisSGTTALTALIFGRNLIIANAGDCRAVLGRrgraiemskdhkpnctserLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELmlhndpercSRELVREAlkrntcdnltvivicfspdpppriemppsrvrrsisaeglnvlkgvldgn
MDVGVVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPelqetllteddeflIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAEGLNVLKGVLDGN
*******************VLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAI*********CTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHM******************TLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFS*********************************
*DVGVVN*************LRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFS*********************************
***************EFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAEGLNVLKGVLDGN
**************SEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP******************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDVGVVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAEGLNVLKGVLDGN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query316 2.2.26 [Sep-21-2011]
P93006380 Probable protein phosphat yes no 0.993 0.826 0.832 1e-153
Q9SD02361 Probable protein phosphat no no 0.933 0.817 0.71 1e-128
Q9SLA1392 Probable protein phosphat no no 0.993 0.801 0.565 1e-98
Q69VD9367 Probable protein phosphat yes no 0.936 0.806 0.592 2e-97
Q9FYN7380 Probable protein phosphat no no 0.962 0.8 0.578 3e-94
Q6AUQ4389 Probable protein phosphat no no 0.946 0.768 0.564 2e-92
Q5SMK6360 Probable protein phosphat no no 0.962 0.844 0.549 5e-91
Q69QZ0354 Probable protein phosphat no no 0.955 0.853 0.542 1e-90
Q3EAF9384 Probable protein phosphat no no 0.949 0.781 0.536 4e-90
Q9LNF4383 Probable protein phosphat no no 0.977 0.806 0.496 2e-84
>sp|P93006|P2C27_ARATH Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1 Back     alignment and function desciption
 Score =  540 bits (1390), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 264/317 (83%), Positives = 285/317 (89%), Gaps = 3/317 (0%)

Query: 2   DVGVVN--KTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPG 59
           DV V N    S D+KSEFLPV RSGSCAE G KQ+MEDEHICID+L +HLG A      G
Sbjct: 62  DVDVCNLVMKSLDDKSEFLPVYRSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLG 121

Query: 60  AFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDIS 119
           AFYGVFDGHGGTDAA +VR NILRFIVEDS FP+CV+KAIKSAF++ADY FAD+SSLDIS
Sbjct: 122 AFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLCVKKAIKSAFLKADYEFADDSSLDIS 181

Query: 120 SGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD 179
           SGTTALTA IFGR LIIANAGDCRAVLGRRGRAIE+SKDHKPNCT+E++RIEKLGGVVYD
Sbjct: 182 SGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYD 241

Query: 180 GYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQ 239
           GYLNGQLSVARA+GDWHMK PKGSACPLS EPELQET L+EDDEFLIMGCDGLWDVMSSQ
Sbjct: 242 GYLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQ 301

Query: 240 GAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMP-PSRVR 298
            AVT+ARKELM+HNDPERCSRELVREALKRNTCDNLTVIV+CFSPDPP RIE+   SRVR
Sbjct: 302 CAVTIARKELMIHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPQRIEIRMQSRVR 361

Query: 299 RSISAEGLNVLKGVLDG 315
           RSISAEGLN+LKGVLDG
Sbjct: 362 RSISAEGLNLLKGVLDG 378

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9SD02|P2C47_ARATH Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1 Back     alignment and function description
>sp|Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1 Back     alignment and function description
>sp|Q69VD9|P2C57_ORYSJ Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYN7|P2C02_ORYSJ Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1 Back     alignment and function description
>sp|Q6AUQ4|P2C47_ORYSJ Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1 Back     alignment and function description
>sp|Q5SMK6|P2C54_ORYSJ Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1 Back     alignment and function description
>sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1 Back     alignment and function description
>sp|Q3EAF9|P2C49_ARATH Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNF4|P2C13_ARATH Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
255539274387 protein phosphatase 2c, putative [Ricinu 1.0 0.816 0.873 1e-162
359491854385 PREDICTED: probable protein phosphatase 1.0 0.820 0.854 1e-160
225457596360 PREDICTED: probable protein phosphatase 1.0 0.877 0.854 1e-160
224086070385 predicted protein [Populus trichocarpa] 0.981 0.805 0.861 1e-159
356517235385 PREDICTED: probable protein phosphatase 0.993 0.815 0.841 1e-157
224061861359 predicted protein [Populus trichocarpa] 0.974 0.857 0.852 1e-152
449455621386 PREDICTED: probable protein phosphatase 1.0 0.818 0.822 1e-152
297823167380 hypothetical protein ARALYDRAFT_902443 [ 0.993 0.826 0.835 1e-152
15226152380 putative protein phosphatase 2C 27 [Arab 0.993 0.826 0.832 1e-151
225438446388 PREDICTED: probable protein phosphatase 0.996 0.811 0.768 1e-146
>gi|255539274|ref|XP_002510702.1| protein phosphatase 2c, putative [Ricinus communis] gi|223551403|gb|EEF52889.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 277/317 (87%), Positives = 296/317 (93%), Gaps = 1/317 (0%)

Query: 1   MDVG-VVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPG 59
           MDVG VV+K+ SDEKS FLPV RSGSCAE GPKQYMEDEH+CIDNL +HLG  A+FP PG
Sbjct: 70  MDVGIVVSKSPSDEKSNFLPVFRSGSCAEGGPKQYMEDEHVCIDNLIEHLGATANFPPPG 129

Query: 60  AFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDIS 119
           AFYGVFDGHGG DAA +VR NIL+FI+EDSHFPICVEKAIKSAF+RADYAFAD++ LDIS
Sbjct: 130 AFYGVFDGHGGIDAASFVRNNILKFIIEDSHFPICVEKAIKSAFLRADYAFADDNELDIS 189

Query: 120 SGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD 179
           SGTTALTALIFGR L+IANAGDCRAVLGRRGRAIEMSKDHKPNCTSER RIEKLGGV+YD
Sbjct: 190 SGTTALTALIFGRTLVIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERHRIEKLGGVIYD 249

Query: 180 GYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQ 239
           GYLNGQLSVARALGDWHMK  KGSACPLSAEPELQET LTEDDEFLI+GCDGLWDVMSSQ
Sbjct: 250 GYLNGQLSVARALGDWHMKGSKGSACPLSAEPELQETDLTEDDEFLILGCDGLWDVMSSQ 309

Query: 240 GAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRR 299
            AVT+ARKELMLHNDPERCSRELVREALKRNTCDN+TV+VICFSPDPPPRIE+P SRVRR
Sbjct: 310 CAVTIARKELMLHNDPERCSRELVREALKRNTCDNVTVVVICFSPDPPPRIEIPQSRVRR 369

Query: 300 SISAEGLNVLKGVLDGN 316
           SISAEGLN+LKGVLD N
Sbjct: 370 SISAEGLNLLKGVLDCN 386

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359491854|ref|XP_002273511.2| PREDICTED: probable protein phosphatase 2C 27 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225457596|ref|XP_002273479.1| PREDICTED: probable protein phosphatase 2C 27 isoform 1 [Vitis vinifera] gi|297745575|emb|CBI40740.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224086070|ref|XP_002307803.1| predicted protein [Populus trichocarpa] gi|222857252|gb|EEE94799.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356517235|ref|XP_003527294.1| PREDICTED: probable protein phosphatase 2C 27-like [Glycine max] Back     alignment and taxonomy information
>gi|224061861|ref|XP_002300635.1| predicted protein [Populus trichocarpa] gi|222842361|gb|EEE79908.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449455621|ref|XP_004145551.1| PREDICTED: probable protein phosphatase 2C 27-like [Cucumis sativus] gi|449485097|ref|XP_004157069.1| PREDICTED: probable protein phosphatase 2C 27-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297823167|ref|XP_002879466.1| hypothetical protein ARALYDRAFT_902443 [Arabidopsis lyrata subsp. lyrata] gi|297325305|gb|EFH55725.1| hypothetical protein ARALYDRAFT_902443 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15226152|ref|NP_180926.1| putative protein phosphatase 2C 27 [Arabidopsis thaliana] gi|75220399|sp|P93006.1|P2C27_ARATH RecName: Full=Probable protein phosphatase 2C 27; Short=AtPP2C27 gi|1707015|gb|AAC69126.1| putative protein phosphatase 2C [Arabidopsis thaliana] gi|17979442|gb|AAL49863.1| putative protein phosphatase 2C [Arabidopsis thaliana] gi|20259093|gb|AAM14262.1| putative protein phosphatase 2C [Arabidopsis thaliana] gi|330253776|gb|AEC08870.1| putative protein phosphatase 2C 27 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225438446|ref|XP_002275069.1| PREDICTED: probable protein phosphatase 2C 47-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
TAIR|locus:2057635380 PP2CG1 "protein phosphatase 2C 0.993 0.826 0.794 7.1e-132
TAIR|locus:2081785361 AT3G51470 [Arabidopsis thalian 0.955 0.836 0.667 2.1e-109
TAIR|locus:2050296392 DBP1 "DNA-binding protein phos 0.993 0.801 0.534 1.4e-85
TAIR|locus:2098018384 AT3G62260 [Arabidopsis thalian 0.949 0.781 0.507 1.1e-76
TAIR|locus:2023812383 AT1G48040 [Arabidopsis thalian 0.977 0.806 0.468 7.7e-71
TAIR|locus:2089035422 AT3G17250 [Arabidopsis thalian 0.958 0.718 0.479 1.8e-69
ASPGD|ASPL0000056464420 AN1358 [Emericella nidulans (t 0.863 0.65 0.336 2.8e-34
POMBASE|SPCC1223.11370 ptc2 "protein phosphatase 2C P 0.765 0.654 0.366 1.5e-33
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.670 0.571 0.374 1.4e-32
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.667 0.596 0.382 1.4e-32
TAIR|locus:2057635 PP2CG1 "protein phosphatase 2C G Group 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
 Identities = 252/317 (79%), Positives = 272/317 (85%)

Query:     2 DVGVVNKT--SSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPG 59
             DV V N    S D+KSEFLPV RSGSCAE G KQ+MEDEHICID+L +HLG A      G
Sbjct:    62 DVDVCNLVMKSLDDKSEFLPVYRSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLG 121

Query:    60 AFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDIS 119
             AFYGVFDGHGGTDAA +VR NILRFIVEDS FP+CV+KAIKSAF++ADY FAD+SSLDIS
Sbjct:   122 AFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLCVKKAIKSAFLKADYEFADDSSLDIS 181

Query:   120 SGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD 179
             SGTTALTA IFGR LIIANAGDCRAVLGRRGRAIE+SKDHKPNCT+E++RIEKLGGVVYD
Sbjct:   182 SGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYD 241

Query:   180 GYLNGQLSVARALGDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQ 239
             GYLNGQLSVARA+GDWHMK PKGSACPLS EP              IMGCDGLWDVMSSQ
Sbjct:   242 GYLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQ 301

Query:   240 GAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMP-PSRVR 298
              AVT+ARKELM+HNDPERCSRELVREALKRNTCDNLTVIV+CFSPDPP RIE+   SRVR
Sbjct:   302 CAVTIARKELMIHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPQRIEIRMQSRVR 361

Query:   299 RSISAEGLNVLKGVLDG 315
             RSISAEGLN+LKGVLDG
Sbjct:   362 RSISAEGLNLLKGVLDG 378
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0010200 "response to chitin" evidence=RCA
GO:0005634 "nucleus" evidence=IDA
GO:0009409 "response to cold" evidence=IEP
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009651 "response to salt stress" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0061416 "regulation of transcription from RNA polymerase II promoter in response to salt stress" evidence=IMP
TAIR|locus:2081785 AT3G51470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050296 DBP1 "DNA-binding protein phosphatase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098018 AT3G62260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2023812 AT1G48040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089035 AT3G17250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056464 AN1358 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
POMBASE|SPCC1223.11 ptc2 "protein phosphatase 2C Ptc2" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P93006P2C27_ARATH3, ., 1, ., 3, ., 1, 60.83280.99360.8263yesno
Q69VD9P2C57_ORYSJ3, ., 1, ., 3, ., 1, 60.59210.93670.8065yesno
Q9SD02P2C47_ARATH3, ., 1, ., 3, ., 1, 60.710.93350.8171nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00002905001
SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (385 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-144
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-85
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-85
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-78
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-39
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 4e-25
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information 
 Score =  410 bits (1056), Expect = e-144
 Identities = 186/311 (59%), Positives = 225/311 (72%), Gaps = 3/311 (0%)

Query: 8   KTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDG 67
            T  +  +EF+PV+RSG+ A+IG +  MED +IC+DN     G       P AFYGVFDG
Sbjct: 52  LTFENMDTEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDG 111

Query: 68  HGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLD--ISSGTTAL 125
           HGG  AA +   ++ RFIVED  FP  +EK + SAF++ D AFA+  SLD  ++SGTTAL
Sbjct: 112 HGGKHAADFACYHLPRFIVEDEDFPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTAL 171

Query: 126 TALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQ 185
            AL+ GR+L++ANAGDCRAVL RRG+AIEMS+DHKP C+ ER RIE  GG VYDGYLNGQ
Sbjct: 172 AALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQ 231

Query: 186 LSVARALGDWHMKSPKGSAC-PLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTV 244
           L+VARALGDWHM+  KGS   PLSAEPEL  T LTE+DEFLI+GCDG+WDV  SQ AV  
Sbjct: 232 LNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDF 291

Query: 245 ARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAE 304
           AR+ L  HNDP  CS+ELV EALKR + DNL V+V+CF   PPP +  P  RV+RSISAE
Sbjct: 292 ARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAE 351

Query: 305 GLNVLKGVLDG 315
           GL  L+  LD 
Sbjct: 352 GLRELQSFLDS 362

Length = 365
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 316
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.95
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.93
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.89
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.83
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.81
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.67
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.57
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.55
PRK10693303 response regulator of RpoS; Provisional 80.08
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.5e-57  Score=418.29  Aligned_cols=301  Identities=61%  Similarity=1.011  Sum_probs=261.5

Q ss_pred             cCcCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChHH
Q 021216           15 SEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPIC   94 (316)
Q Consensus        15 ~~~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~   94 (316)
                      ...+|.+++|.+|++|.|+.|||++++..+.....+.......+..||+|||||||..+|++|++.+.+.|.+.......
T Consensus        59 ~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~  138 (365)
T PLN03145         59 TEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPRE  138 (365)
T ss_pred             hhccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchh
Confidence            34578899999999999999999998766432211111111234689999999999999999999999999876666667


Q ss_pred             HHHHHHHHHHHHHHHHHhcCC--CCCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHH
Q 021216           95 VEKAIKSAFVRADYAFADNSS--LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEK  172 (316)
Q Consensus        95 ~~~~l~~a~~~~~~~l~~~~~--~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~  172 (316)
                      +.++|+++|..+++.+.+...  ....+|||++++++.++.+|++|+||||+|+++++++++||+||++.++.|+.||.+
T Consensus       139 ~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~  218 (365)
T PLN03145        139 IEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEA  218 (365)
T ss_pred             HHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHH
Confidence            788999999999999876432  223599999999999999999999999999999999999999999999999999999


Q ss_pred             cCCEEEcceecCceecccccCCcccCCCCCC-CCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhc
Q 021216          173 LGGVVYDGYLNGQLSVARALGDWHMKSPKGS-ACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELML  251 (316)
Q Consensus       173 ~g~~~~~~~~~g~~~ltralG~~~~~~~~~~-~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~  251 (316)
                      .||.+..++.++.+++||+||++.+|..... ..++.++|++..+++.++|+||||||||||++++++++.+++...+..
T Consensus       219 ~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~  298 (365)
T PLN03145        219 SGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQE  298 (365)
T ss_pred             cCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhc
Confidence            9999988888999999999999887643211 124678999999999999999999999999999999999998876666


Q ss_pred             cCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCCCCCCCCCCCccccccchhhHHHHhhhccC
Q 021216          252 HNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAEGLNVLKGVLDG  315 (316)
Q Consensus       252 ~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (316)
                      ..+++++|+.|++.|+.+++.||+|||||+|+..+++....+++.++|+++..|+..|+.++++
T Consensus       299 ~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (365)
T PLN03145        299 HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAEGLRELQSFLDS  362 (365)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCccccccccccccccCHHHHHHHHHhhhc
Confidence            6789999999999999999999999999999999999999999999999999999999999875

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-34
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-27
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 4e-27
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 4e-27
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 5e-22
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-22
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 5e-22
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-21
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 4e-20
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-20
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 4e-20
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 4e-20
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 4e-20
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 4e-20
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 4e-20
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-19
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 2e-10
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 2e-06
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-06
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 3e-05
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 151/310 (48%), Gaps = 48/310 (15%)
Query: 5   VVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGV 64
           +  K SSDE +EFL    SGS +  G +   ED H CI N  D            +F+ V
Sbjct: 10  LTTKDSSDESNEFLA---SGSSSMQGWRISQEDAHNCILNFDDQC----------SFFAV 56
Query: 65  FDGHGGTDAALYVRANILRFI-VEDSHFPICVEKAIKSAFVRADYAF------------- 110
           +DGHGG + A Y   ++  F+   +++     EKA+K AF+  D                
Sbjct: 57  YDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLS 116
Query: 111 ADNSSLDIS----SGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSE 166
            D++  D      SG TA+ AL+ G++L +ANAGD R V+ R G+A+EMS DHKP  T E
Sbjct: 117 GDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVE 176
Query: 167 RLRIEKLGG-VVYDGYLNGQLSVARALGDWHMKSPK---GSACPLSAEPXXXXXXXXXXX 222
             RIEK GG V  DG +NG L+++RA+GD   K  K        +SA P           
Sbjct: 177 YQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPED 236
Query: 223 XXXIMGCDGLWDVMSSQGAVTVARKELMLHNDP----ERCSRELVREALKRNT------C 272
              ++ CDG+W+ M+S+  V   ++ +   N P     +   EL    L  +T      C
Sbjct: 237 EFMVLACDGIWNFMTSEQVVQFVQERI---NKPGMKLSKICEELFDHCLAPHTRGDGTGC 293
Query: 273 DNLTVIVICF 282
           DN+T I++ F
Sbjct: 294 DNMTAIIVQF 303
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-117
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-115
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-108
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-107
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-107
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-106
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-105
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-102
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-86
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 4e-74
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 6e-73
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 4e-71
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-48
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-15
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-14
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 8e-14
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 3e-13
3rnr_A211 Stage II sporulation E family protein; structural 4e-08
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
 Score =  342 bits (878), Expect = e-117
 Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 25/307 (8%)

Query: 5   VVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGV 64
            + K ++  +      LR G  +  G +  MED H  +  L   L          +F+ V
Sbjct: 9   KMEKHNAQGQG---NGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLE-------SWSFFAV 58

Query: 65  FDGHGGTDAALYVRANILRFIVEDSHFPIC--------VEKAIKSAFVRADYAF---ADN 113
           +DGH G+  A Y   ++L  I  +  F           V+  I++ F+  D      ++ 
Sbjct: 59  YDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEK 118

Query: 114 SSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKL 173
                 SG+TA+  LI  ++    N GD R +L R  +    ++DHKP+   E+ RI+  
Sbjct: 119 KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178

Query: 174 GGVVYDGYLNGQLSVARALGDWHMKSPKGSAC---PLSAEPELQETLLT-EDDEFLIMGC 229
           GG V    +NG L+V+RALGD+  K   G       +S EPE+ +   + EDD+F+I+ C
Sbjct: 179 GGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILAC 238

Query: 230 DGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPR 289
           DG+WDVM ++      R  L + +D E+   E+V   L + + DN++VI+ICF   P   
Sbjct: 239 DGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVS 298

Query: 290 IEMPPSR 296
            E     
Sbjct: 299 PEAVKKE 305
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.89
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.87
3f79_A255 Probable two-component response regulator; adaptor 99.79
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.77
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.35
3eq2_A394 Probable two-component response regulator; adaptor 98.7
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=5.4e-53  Score=385.31  Aligned_cols=279  Identities=33%  Similarity=0.547  Sum_probs=233.5

Q ss_pred             CCcCCccccCCCcccC---cCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHH
Q 021216            1 MDVGVVNKTSSDEKSE---FLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYV   77 (316)
Q Consensus         1 ~~~~~~~~~~~~~~~~---~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a   77 (316)
                      |-||++|+.|......   ....++||+++++|+|+.|||++++.......       ..+..+|+|||||||..+|++|
T Consensus         1 ~~mg~~l~~p~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~-------~~~~~l~~V~DGhGG~~~a~~a   73 (307)
T 2p8e_A            1 MSLGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHG-------LEDWSFFAVYDGHAGSRVANYC   73 (307)
T ss_dssp             -----CCSSCEEEEEEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTT-------EEEEEEEEEEEEESCSHHHHHH
T ss_pred             CCcccccCCCccccccccCCCCCeeEEEEecCCCCCcccceEEEEecCCCC-------CCCeEEEEEECCCCCHHHHHHH
Confidence            7899999999855543   35789999999999999999999886543100       0246799999999999999999


Q ss_pred             HHHHHHHHHhcCCC-------------hHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCccEEEEEEeCCeEEEEEecc
Q 021216           78 RANILRFIVEDSHF-------------PICVEKAIKSAFVRADYAFADNSSL---DISSGTTALTALIFGRNLIIANAGD  141 (316)
Q Consensus        78 ~~~~~~~l~~~~~~-------------~~~~~~~l~~a~~~~~~~l~~~~~~---~~~~gtT~~~~~i~~~~l~~a~vGD  141 (316)
                      ++.+++.|.+...+             ...+.++|+++|..+|+.+.+....   ...+|||++++++.+++++++|+||
T Consensus        74 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGD  153 (307)
T 2p8e_A           74 STHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGD  153 (307)
T ss_dssp             HHHHHHHHHTSTTTC-----------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESS
T ss_pred             HHHHHHHHHhhHhhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccC
Confidence            99999999763211             3457889999999999999875432   2469999999999999999999999


Q ss_pred             ccEEEEecCeeeeeCCCCCCCChhHHHHHHHcCCEEEcceecCceecccccCCcccCCCCCC---CCCCCCCCeeEEEEe
Q 021216          142 CRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGS---ACPLSAEPELQETLL  218 (316)
Q Consensus       142 Sr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~~g~~~~~~~~~g~~~ltralG~~~~~~~~~~---~~~v~~~p~i~~~~l  218 (316)
                      ||+|++|+|++.+||+||++.++.|+.||...|+.+...+.+|.+.+||+||+..+|.....   .+.+.++|++..+.+
T Consensus       154 SRa~l~r~g~~~~lT~DH~~~~~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l  233 (307)
T 2p8e_A          154 SRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILR  233 (307)
T ss_dssp             CEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEEC
T ss_pred             cEEEEEECCccccCCCCCCCCCHHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEc
Confidence            99999999999999999999999999999999999988888899999999999998865321   234678999999999


Q ss_pred             cCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCC
Q 021216          219 TEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP  286 (316)
Q Consensus       219 ~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~  286 (316)
                      .++|+||||||||||++++++++.+++...+....+++.+|+.|++.|+.+|+.||+||||+++.+.+
T Consensus       234 ~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          234 AEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             CTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred             CCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence            98888999999999999999999999988655567899999999999999999999999999998754
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 316
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 7e-61
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-26
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (492), Expect = 7e-61
 Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 25/297 (8%)

Query: 5   VVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGV 64
            + K ++  +   L   R G  +  G +  MED H  +  L   L +        +F+ V
Sbjct: 8   KMEKHNAQGQGNGL---RYGLSSMQGWRVEMEDAHTAVIGLPSGLES-------WSFFAV 57

Query: 65  FDGHGGTDAALYVRANILRFIVEDSHFPI--------CVEKAIKSAFVRAD---YAFADN 113
           +DGH G+  A Y   ++L  I  +  F           V+  I++ F+  D      ++ 
Sbjct: 58  YDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEK 117

Query: 114 SSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKL 173
                 SG+TA+  LI  ++    N GD R +L R  +    ++DHKP+   E+ RI+  
Sbjct: 118 KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 177

Query: 174 GGVVYDGYLNGQLSVARALGDWHMKSPKGSACP---LSAEPELQE-TLLTEDDEFLIMGC 229
           GG V    +NG L+V+RALGD+  K   G       +S EPE+ +     EDD+F+I+ C
Sbjct: 178 GGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILAC 237

Query: 230 DGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP 286
           DG+WDVM ++      R  L + +D E+   E+V   L + + DN++VI+ICF   P
Sbjct: 238 DGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-55  Score=392.96  Aligned_cols=276  Identities=33%  Similarity=0.527  Sum_probs=241.0

Q ss_pred             CCccccCCCccc---CcCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHH
Q 021216            4 GVVNKTSSDEKS---EFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRAN   80 (316)
Q Consensus         4 ~~~~~~~~~~~~---~~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~   80 (316)
                      |+.|+.|..++.   ...+.++||+++++|+|+.|||++.+.....+..       ++..||||||||||..+|++|++.
T Consensus         1 ~~~l~~p~~~k~~~~~~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~-------~~~~lf~V~DGhGG~~~s~~~~~~   73 (295)
T d1a6qa2           1 GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGL-------ESWSFFAVYDGHAGSQVAKYCCEH   73 (295)
T ss_dssp             CCCCSSCEEEEEEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTTE-------EEEEEEEEEEEESCSHHHHHHHHH
T ss_pred             CCCCCCCCcccCcccccCCceEEEEEeCccCCCcccCeeEEEcccCCCC-------CceEEEEEEeCCCChHHHHHHHHH
Confidence            678888886663   3357899999999999999999998876542221       356799999999999999999999


Q ss_pred             HHHHHHhc--------CCChHHHHHHHHHHHHHHHHHHHh---cCCCCCCCCccEEEEEEeCCeEEEEEeccccEEEEec
Q 021216           81 ILRFIVED--------SHFPICVEKAIKSAFVRADYAFAD---NSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRR  149 (316)
Q Consensus        81 ~~~~l~~~--------~~~~~~~~~~l~~a~~~~~~~l~~---~~~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~  149 (316)
                      +...|.+.        ....+.+.++|+++|.++++.+..   .......+|||++++++.+++++++|+||||+|++++
T Consensus        74 l~~~l~~~~~~~~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~  153 (295)
T d1a6qa2          74 LLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRN  153 (295)
T ss_dssp             HHHHHHTSHHHHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEET
T ss_pred             HHHHHHHhhhhccccccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeec
Confidence            99988653        223457888999999999988763   2333456999999999999999999999999999999


Q ss_pred             CeeeeeCCCCCCCChhHHHHHHHcCCEEEcceecCceecccccCCcccCCCCC---CCCCCCCCCeeEEEEec-CCCeEE
Q 021216          150 GRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKG---SACPLSAEPELQETLLT-EDDEFL  225 (316)
Q Consensus       150 g~~~~lt~dh~~~~~~e~~ri~~~g~~~~~~~~~g~~~ltralG~~~~~~~~~---~~~~v~~~p~i~~~~l~-~~d~~l  225 (316)
                      +++++||.||+|.++.|++||...|+.+...+.+|.+.+||++|++.+|...+   ..+.+.+.|++..+.+. ++++||
T Consensus       154 ~~~~~lT~dH~~~~~~E~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~fl  233 (295)
T d1a6qa2         154 RKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFI  233 (295)
T ss_dssp             TEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEE
T ss_pred             ccceeeccccCcccHHHHhhHhhcCCcccccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeE
Confidence            99999999999999999999999999999999999999999999999987643   23458999999999986 667799


Q ss_pred             EEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCC
Q 021216          226 IMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP  286 (316)
Q Consensus       226 vL~SDGv~d~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~  286 (316)
                      |||||||||+++++++.+++...+....+++.+|+.|++.|+.+++.||+|||||+|++.+
T Consensus       234 vL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         234 ILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             EEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             eeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCC
Confidence            9999999999999999999998877788999999999999999999999999999998765
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure