Citrus Sinensis ID: 021220

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
MGRSPCCEKEHTNKGAWTKEEDERLINYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINFHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNSAPVPAPSPGNNNNNNSNKRNNNTSTNTKTDCSNKFEMNVQSNRPVMQLVPEFIMSTGRSIGTDKNHNYHSPSSAEDSSNNTSGSGVTTEEAHQELNLELSIGLPQQPRIINQKPAAGGSYQFFGANTNNNPSTGAAQTGAACLCYNLGFQNSKLACSCSSNPMPMSTIITADNNLHRFYRPPLDS
ccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHcccccHHHHHHccccccccccccccHHHHHHHHHHHHHcccHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccEEccccccc
***SPCCE***TNKGAWTKEEDERLINYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINFHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG******************************************************************************************************HQELNL**************************************AQTGAACLCYNLGFQNSKLACSCS********II****NLHRFYRPPL**
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MGRSPCCEKEHTNKGAWTKEEDERLINYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINFHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNSAPVPAPSPGNNNNNNSNKRNNNTSTNTKTDCSNKFEMNVQSNRPVMQLVPEFIMSTGRSIGTDKNHNYHSPSSAEDSSNNTSGSGVTTEEAHQELNLELSIGLPQQPRIINQKPAAGGSYQFFGANTNNNPSTGAAQTGAACLCYNLGFQNSKLACSCSSNPMPMSTIITADNNLHRFYRPPLDS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Myb-related protein 330 Transcription factor.probableP81395

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GV2, chain A
Confidence level:very confident
Coverage over the Query: 11-114
View the alignment between query and template
View the model in PyMOL
Template: 1H89, chain C
Confidence level:very confident
Coverage over the Query: 52-153
View the alignment between query and template
View the model in PyMOL