Citrus Sinensis ID: 021223

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MKTSSSNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPTRPDSDDL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHHHHHHHHHHHEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHccccccccccccccccccccccccEEcccccccccccHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHcccccccEEEcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHccccccccccccccccccccccEEEccccEEEEEccccEEcccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccccccccccccHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mktsssnlNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKygpalflggLDSITALFVLFLFHSLLVMLVWSYFSVVitdpggvppnwipnldeesggagqwagsdndgvdlganqsamliepkhqgvrfcqkcnqfkpprchhcsvcrrcilkmdhhCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIAlftddeipespgnLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEkktspkwrydlgwkiNFEQVfgknkkywlipayskddlewlpsfqcveyptrpdsddl
Flexible Loop (DISEMBL)
mktsssnlnMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFekktspkwrydlGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQcveyptrpdsddl
Low Complexity Region (SEG)
MKTSSSNLNMAWNVFKYCTVLRAlgsvmilvvlgiigvsYYAVAVAKYGPALFLGGLDSITAlfvlflfhsllvmlvWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKyfllflfytflettlvtvSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPTRPDSDDL
Disordered region (IsUnstruct)
*******LNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNL*************************AMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEY*********
Disordered Region (DISOPRED)
************NVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLD***********************SAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSP*WRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYP********
Disordered Region (DISEMBL)
MKTSSSNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPTRPDSDDL
Disordered Region (DISPRO)
********NMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNL****************GVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQ*************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKTSSSNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPTRPDSDDL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	316	2.2.26 [Sep-21-2011]
Q8VYP5	307	Probable S-acyltransferas	yes	no	0.955	0.983	0.673	1e-115
Q94C49	302	Probable S-acyltransferas	no	no	0.924	0.966	0.623	1e-95
Q5M757	291	Probable S-acyltransferas	no	no	0.905	0.982	0.511	6e-78
Q5Y5T1	380	Probable palmitoyltransfe	yes	no	0.870	0.723	0.334	3e-39
P59267	366	Palmitoyltransferase ZDHH	no	no	0.860	0.743	0.342	1e-37
Q9UIJ5	367	Palmitoyltransferase ZDHH	yes	no	0.835	0.719	0.342	2e-37
Q9JKR5	366	Palmitoyltransferase ZDHH	yes	no	0.886	0.765	0.333	2e-37
Q5FWL7	338	Palmitoyltransferase ZDHH	N/A	no	0.712	0.665	0.357	6e-35
Q5W0Z9	365	Probable palmitoyltransfe	no	no	0.873	0.756	0.353	1e-34
Q0VC89	365	Probable palmitoyltransfe	no	no	0.844	0.731	0.355	3e-34

>sp|Q8VYP5|ZDH14_ARATH Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1

 Score =  414 bits (1064), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/309 (67%), Positives = 246/309 (79%), Gaps = 7/309 (2%)

Query: 6   SNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV 65
           S   MAWNVFK+CT LR LGS+MIL+VLG++GV+YYAV +  YGPAL  GGLDS+ AL +
Sbjct: 4   SGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAALTI 63

Query: 66  LFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSA 125
           L LFH LL ML+WSYFSVV TDPG VPPNW P+ DEE G +      D  G+   ++ S 
Sbjct: 64  LILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSSSS- 122

Query: 126 MLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFL 185
               P+   VRFC+KCNQ KP RCHHCSVC RC+LKMDHHCVWVVNCVGA NYKYFLLFL
Sbjct: 123 ---NPR---VRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFL 176

Query: 186 FYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHIS 245
           FYTFLETTLVT+ L+P FIA F+D+EIP +PG LA +F+ FVLNLAFALS++GFLIMHIS
Sbjct: 177 FYTFLETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAFVLNLAFALSVMGFLIMHIS 236

Query: 246 LVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCV 305
           LVAGNTTTIEA+EKKT+ KWRYDLG K NFEQVFG +K+YWLIP Y+++DL  +P  Q +
Sbjct: 237 LVAGNTTTIEAYEKKTTTKWRYDLGKKKNFEQVFGMDKRYWLIPGYTEEDLRRMPELQGL 296

Query: 306 EYPTRPDSD 314
           EYP++PD D
Sbjct: 297 EYPSKPDFD 305

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q94C49|ZDH18_ARATH Probable S-acyltransferase At4g22750 OS=Arabidopsis thaliana GN=At4g22750 PE=2 SV=1

 Score =  349 bits (896), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/308 (62%), Positives = 234/308 (75%), Gaps = 16/308 (5%)

Query: 10  MAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLF 69
           MAWNVFK+CT LRALGS+MIL+V+GIIG +YYAV V  YGPAL +GG+DS+ ++ VL  F
Sbjct: 1   MAWNVFKFCTALRALGSIMILIVIGIIGFTYYAVVVVNYGPALLIGGVDSLLSVLVLAFF 60

Query: 70  HSLLVMLVWSYFSVVITDPGGVPPNWIPNLD-EESGGAGQWAGSDNDGVDLGANQSAMLI 128
           H LL+ML+WSYFSVV+TDPGGVP  W P LD E+S G     G  + G            
Sbjct: 61  HFLLIMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGNQALIGEASVG------------ 108

Query: 129 EPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYT 188
           +    GVR+C+KCNQ+KPPR HHCSVC RCILKMDHHCVWVVNCVGA NYK FLLFLFYT
Sbjct: 109 DSSSHGVRYCRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYT 168

Query: 189 FLETTLVTVSLLPIFIALFT--DDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISL 246
           FLETT+V VSLLPIF+  F+  D +I  SPG+LAASF+ FVLN+AFALS+LGFLIMHI L
Sbjct: 169 FLETTVVAVSLLPIFLVFFSDGDGDITVSPGSLAASFVAFVLNIAFALSVLGFLIMHIML 228

Query: 247 VAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVE 306
           VA NTTTIEA+EK T   W Y++G K NFEQVFG +K YW +P Y++DD + LP+   ++
Sbjct: 229 VARNTTTIEAYEKHTV-NWPYNVGRKTNFEQVFGSDKMYWFVPLYTEDDKKKLPALGGLD 287

Query: 307 YPTRPDSD 314
           + +R +S+
Sbjct: 288 FTSRSESE 295

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5M757|ZDH15_ARATH Probable S-acyltransferase At4g00840 OS=Arabidopsis thaliana GN=At4g00840 PE=2 SV=1

 Score =  291 bits (744), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 156/305 (51%), Positives = 208/305 (68%), Gaps = 19/305 (6%)

Query: 13  NVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITAL--FVLFLFH 70
           N+F++C+ L+ LG  MIL+V+ ++GVSYYAV V+ + P L  G   +++AL   ++F+FH
Sbjct: 2   NLFRFCSGLKVLGYFMILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALIIFVFH 61

Query: 71  SLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEP 130
            LL+ML+WSYF+ V TDPG VP ++     E  GG    AG+  D    G+         
Sbjct: 62  FLLIMLLWSYFTTVFTDPGSVPEHF---RREMGGGDSLEAGTSTDQGAFGS--------- 109

Query: 131 KHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFL 190
               + +C KC   KPPRCHHCSVC+RC+LKMDHHCVW+VNCVGA NYK+FLLFLFYTFL
Sbjct: 110 ----LGYCTKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFL 165

Query: 191 ETTLVTVSLLPIFIALFTDD-EIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAG 249
           ET L  + LLP FI  F+   +   SPG LA+  + FVLN AF LS+L F++MHISL++ 
Sbjct: 166 ETMLDVIVLLPSFIEFFSQAIKHSSSPGKLASLVLAFVLNFAFVLSLLCFVVMHISLLSS 225

Query: 250 NTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPT 309
           NTT++E  EK    +W+YDLG K NFEQVFGK K +WL+P YSKDD++ + S + +E+PT
Sbjct: 226 NTTSVEVHEKNGEVRWKYDLGKKKNFEQVFGKKKAFWLLPLYSKDDIDNITSLEGLEFPT 285

Query: 310 RPDSD 314
             D D
Sbjct: 286 CSDID 290

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5Y5T1|ZDH20_MOUSE Probable palmitoyltransferase ZDHHC20 OS=Mus musculus GN=Zdhhc20 PE=2 SV=1

 Score =  162 bits (410), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 146/302 (48%), Gaps = 27/302 (8%)

Query: 12  WNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHS 71
           W +++ C   R +G V +L +  ++  SYYA  V      +   G    T ++ L  FH 
Sbjct: 4   WTLWRCCQ--RVVGWVPVLFITFVVVWSYYAYVVELCVSTISRTGEKGKTVVY-LVAFHL 60

Query: 72  LLVMLVWSYFSVVITDPGGVPPN-WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEP 130
             VM VWSY+  + T P       ++ N ++E            D +   A    +    
Sbjct: 61  FFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQDILRRAARDLPIYTTS 120

Query: 131 KHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFL 190
             + +R+C+KC   KP R HHCS C RC+LKMDHHC WV NCVG  NYK+F+LFL Y+ L
Sbjct: 121 ASKAIRYCEKCQLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFTNYKFFMLFLLYSLL 180

Query: 191 ETTLVTVSLLPIFIALFT------DDEIPESPGNL----AASF---ITFVLNLAFALSIL 237
               V  ++L  FI  +T       +  P++   +    +A F     F ++  F +S+L
Sbjct: 181 YCLFVAATVLEYFIKFWTLCRRKSTENCPKNEPTVLNFPSAKFHVLFLFFVSAMFFVSVL 240

Query: 238 GFLIMHISLVAGNTTTIEAFEKKTSPKWRY-------DLGWKINFEQVFGKNKKYWLIPA 290
                H  LV  N TTIE+F    +P + Y        LG   N+ QVFG  KKYWL+P 
Sbjct: 241 SLFSYHCWLVGKNRTTIESFR---APMFSYGIDGNGFSLGCSKNWRQVFGDEKKYWLVPI 297

Query: 291 YS 292
           +S
Sbjct: 298 FS 299

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P59267|ZDHC2_MOUSE Palmitoyltransferase ZDHHC2 OS=Mus musculus GN=Zdhhc2 PE=2 SV=1

 Score =  156 bits (395), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 147/286 (51%), Gaps = 14/286 (4%)

Query: 35  IIGVSYYAVAVAKYGPALFLGGLDSITALFV-LFLFHSLLVMLVWSYFSVVITDPGGVPP 93
           ++G SYYA A+      L +  +++I    V L  +H L  M VWSY+  + T P     
Sbjct: 28  LLGWSYYAYAIQ-----LCIVSMENIGEQVVCLMAYHLLFAMFVWSYWKTIFTLPMNPSK 82

Query: 94  NWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQG-VRFCQKCNQFKPPRCHHC 152
            +  +  E+     +  G  +  V   A +   +      G +R+C +C   KP RCHHC
Sbjct: 83  EFHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCQLIKPDRCHHC 142

Query: 153 SVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEI 212
           SVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    +  + L  FI  +T+  +
Sbjct: 143 SVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAATDLQYFIRFWTNG-L 201

Query: 213 PESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFE----KKTSPKWRYD 268
           P++       F+ F   + F++S+      H  LV+ N +T+EAF     +  + K  + 
Sbjct: 202 PDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEAFRNPVFRHGTDKNGFS 260

Query: 269 LGWKINFEQVFGKNKKYWLIPAY-SKDDLEWLPSFQCVEYPTRPDS 313
           LG+  N  QVFG  KKYWL+P + S+ D    P+    + P +P +
Sbjct: 261 LGFSKNMRQVFGDEKKYWLLPVFSSQGDGCSFPTCLVNQDPEQPST 306

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UIJ5|ZDHC2_HUMAN Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDHHC2 PE=2 SV=1

 Score =  156 bits (395), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 143/277 (51%), Gaps = 13/277 (4%)

Query: 22  RALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV-LFLFHSLLVMLVWSY 80
           R L  + ++ +  ++G SYYA A+      L +  +++     V L  +H L  M VWSY
Sbjct: 16  RVLYWIPVVFITLLLGWSYYAYAIQ-----LCIVSMENTGEQVVCLMAYHLLFAMFVWSY 70

Query: 81  FSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQG-VRFCQ 139
           +  + T P      +  +  E+     +  G  +  V   A +   +      G +R+C 
Sbjct: 71  WKTIFTLPMNPSKEFHLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCD 130

Query: 140 KCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSL 199
           +C   KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    +  + 
Sbjct: 131 RCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAATD 190

Query: 200 LPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFE- 258
           L  FI  +T+  +P++       F+ F   + F++S+      H  LV+ N +T+EAF  
Sbjct: 191 LQYFIKFWTNG-LPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEAFRS 248

Query: 259 ---KKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYS 292
              +  + K  + LG+  N  QVFG  KKYWL+P +S
Sbjct: 249 PVFRHGTDKNGFSLGFSKNMRQVFGDEKKYWLLPIFS 285

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9JKR5|ZDHC2_RAT Palmitoyltransferase ZDHHC2 OS=Rattus norvegicus GN=Zdhhc2 PE=2 SV=1

 Score =  156 bits (394), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 151/294 (51%), Gaps = 14/294 (4%)

Query: 27  VMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV-LFLFHSLLVMLVWSYFSVVI 85
           + ++ +  ++G SYYA A+      L +  +++I    V L  +H L  M VWSY+  + 
Sbjct: 20  IPVVFISLLLGWSYYAYAIQ-----LCIVSMENIGEQVVCLMAYHLLFAMFVWSYWKTIF 74

Query: 86  TDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQG-VRFCQKCNQF 144
           T P      +  +  E+     +  G  +  V   A +   +      G +R+C +C   
Sbjct: 75  TLPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCRLI 134

Query: 145 KPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFI 204
           KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    +  + L  FI
Sbjct: 135 KPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAATDLQYFI 194

Query: 205 ALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFE----KK 260
             +T+  +P++       F+ F   + F++S+      H  LV+ N +T+EAF     + 
Sbjct: 195 RFWTNG-LPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEAFRNPVFRH 252

Query: 261 TSPKWRYDLGWKINFEQVFGKNKKYWLIPAY-SKDDLEWLPSFQCVEYPTRPDS 313
            + K  + LG+  N  QVFG  KKYWL+P + S+ D    P+    + P +P +
Sbjct: 253 GTDKNGFSLGFSKNMRQVFGDEKKYWLLPIFSSQGDGCSFPTCLVNQDPEQPST 306

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5FWL7|ZDH15_XENLA Palmitoyltransferase ZDHHC15 OS=Xenopus laevis GN=zdhhc15 PE=2 SV=1

 Score =  148 bits (373), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 121/232 (52%), Gaps = 7/232 (3%)

Query: 66  LFLFHSLLVMLVWSYFSVVITDPGGVPPNWI-PNLDEESGGAGQWAGSDNDGVDLGANQS 124
           L +FH++ ++ +W+Y+  + T P      ++ P  ++E     +   +    V   A + 
Sbjct: 58  LLIFHTVFLLFIWTYWKAIFTPPKQPTKKFLLPYAEKERYDNEERPEAQKQIVAEFARKL 117

Query: 125 AMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLF 184
            +         RFC  C   KP RCHHCSVC  C+LKMDHHC WV NC+G  NYK+FLLF
Sbjct: 118 PVYTRTGSGATRFCDTCQMVKPDRCHHCSVCGMCVLKMDHHCPWVNNCIGYSNYKFFLLF 177

Query: 185 LFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHI 244
           L Y  L    +  ++   FI L+  D +          F+ FV  L F +S++     H 
Sbjct: 178 LAYAMLYCLYIGCTVFQYFI-LYWTDTLSNGRAKFHVLFLLFV-ALMFFISLMFLFGYHC 235

Query: 245 SLVAGNTTTIEAFEK---KTSP-KWRYDLGWKINFEQVFGKNKKYWLIPAYS 292
            LV+ N TT+EAF     ++ P K  + LG + N EQVFGK +K WLIP ++
Sbjct: 236 WLVSLNRTTLEAFSTPVFQSGPDKNGFHLGIRRNLEQVFGKERKLWLIPVFT 287

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5W0Z9|ZDH20_HUMAN Probable palmitoyltransferase ZDHHC20 OS=Homo sapiens GN=ZDHHC20 PE=1 SV=1

 Score =  147 bits (371), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 144/286 (50%), Gaps = 10/286 (3%)

Query: 12  WNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHS 71
           W +++ C   R +G V +L +  ++  SYYA  V      +F G  ++   +  L  FH 
Sbjct: 4   WTLWRCCQ--RVVGWVPVLFITFVVVWSYYAYVVELCVFTIF-GNEENGKTVVYLVAFHL 60

Query: 72  LLVMLVWSYFSVVITDPGGVPPN-WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEP 130
             VM VWSY+  + T P       ++ N ++E            + +   A    +    
Sbjct: 61  FFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARALPIYTTS 120

Query: 131 KHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFL 190
             + +R+C+KC   KP R HHCS C  CILKMDHHC WV NCVG  NYK+FLLFL Y+ L
Sbjct: 121 ASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLL 180

Query: 191 ETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGN 250
               V  ++L  FI  +T +E+ ++       F+ FV  + F +S+L     H  LV  N
Sbjct: 181 YCLFVAATVLEYFIKFWT-NELTDTRAKFHVLFLFFVSAM-FFISVLSLFSYHCWLVGKN 238

Query: 251 TTTIEAFEKKT---SPKWR-YDLGWKINFEQVFGKNKKYWLIPAYS 292
            TTIE+F   T    P    + LG   N+ QVFG  KKYWL+P +S
Sbjct: 239 RTTIESFRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFS 284

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q0VC89|ZDH20_BOVIN Probable palmitoyltransferase ZDHHC20 OS=Bos taurus GN=ZDHHC20 PE=2 SV=1

 Score =  145 bits (367), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 142/281 (50%), Gaps = 14/281 (4%)

Query: 22  RALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYF 81
           R +G V +L +  ++  SYYA  V +       G  ++  A+  L  FH   VM VWSY+
Sbjct: 12  RTVGWVPVLFITFVVVWSYYAYVV-ELCVFTLSGNGENGKAVVYLVAFHLFFVMFVWSYW 70

Query: 82  SVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGV-DLGANQSAMLIEPKHQGVRFCQK 140
             + T P      +  +  E+     +++      +    A    +      + VR+C++
Sbjct: 71  MTIFTSPASPSKEFCLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASKTVRYCER 130

Query: 141 CNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLL 200
           C   KP R HHCS C  CILKMDHHC WV NCVG  NYK+FLLFLFY+ L    V  ++L
Sbjct: 131 CQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLFYSLLYCLFVATTVL 190

Query: 201 PIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKK 260
             FI  +T +E+ ++       F+ FV  + F +S+L  L  H  LV  N TTIE+F   
Sbjct: 191 QYFIKFWT-NELTDTRAKFHVLFLFFVSTM-FFISVLSLLSYHCWLVGKNRTTIESFR-- 246

Query: 261 TSPKWRY-------DLGWKINFEQVFGKNKKYWLIPAYSKD 294
            +P + Y        LG   N+ QVFG  KKYWL+P +S  
Sbjct: 247 -APMFSYGTDGNGFSLGCSKNWRQVFGDEKKYWLLPVFSSQ 286

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
255541300	307	zinc finger protein, putative [Ricinus c	0.949	0.977	0.689	1e-117
356496388	304	PREDICTED: probable S-acyltransferase At	0.946	0.983	0.689	1e-116
116786988	316	unknown [Picea sitchensis]	0.984	0.984	0.668	1e-116
356506038	304	PREDICTED: probable S-acyltransferase At	0.946	0.983	0.682	1e-116
255638237	307	unknown [Glycine max]	0.943	0.970	0.644	1e-115
224074717	310	predicted protein [Populus trichocarpa]	0.971	0.990	0.719	1e-115
224129994	309	predicted protein [Populus trichocarpa]	0.936	0.957	0.687	1e-115
225453943	307	PREDICTED: probable S-acyltransferase At	0.949	0.977	0.676	1e-113
357469609	292	Palmitoyltransferase pfa3 [Medicago trun	0.920	0.996	0.630	1e-113
296089167	300	unnamed protein product [Vitis vinifera]	0.936	0.986	0.681	1e-113

>gi|255541300|ref|XP_002511714.1| zinc finger protein, putative [Ricinus communis] gi|223548894|gb|EEF50383.1| zinc finger protein, putative [Ricinus communis]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/309 (68%), Positives = 250/309 (80%), Gaps = 9/309 (2%)

Query: 6   SNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV 65
           S   MAWNVFK+CT LR LGS+MIL+VLG++GV+YYAV +  YGPAL  GG DS TAL V
Sbjct: 4   SGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALQDGGFDSCTALAV 63

Query: 66  LFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSA 125
           L  FH LLVML+WSYFSVV+TDPGGVPPNW P +DEE G A    GSD  GV        
Sbjct: 64  LIPFHCLLVMLLWSYFSVVLTDPGGVPPNWRPAIDEERGEADPLNGSDFSGV-------- 115

Query: 126 MLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFL 185
            L +  +Q +R+C+KCNQ KPPRCHHCSVC RC+LKMDHHCVWVVNCVGA NYKYFLLFL
Sbjct: 116 -LTDSSNQRIRYCRKCNQQKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFL 174

Query: 186 FYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHIS 245
           FYTFLET+LVT+SLLP FIA F+D EIP +PG LA +F+ FVLNLAFALS+LGFLIMHIS
Sbjct: 175 FYTFLETSLVTLSLLPHFIAFFSDGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHIS 234

Query: 246 LVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCV 305
           LV+ NTTTIEA+EKKT+PKWRYDLG + NFEQVFG +K+YW IPAYS++DL  +P+ Q +
Sbjct: 235 LVSANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGADKRYWFIPAYSEEDLRRMPALQGL 294

Query: 306 EYPTRPDSD 314
           EYP++P+ D
Sbjct: 295 EYPSKPELD 303

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496388|ref|XP_003517050.1| PREDICTED: probable S-acyltransferase At3g60800-like isoform 1 [Glycine max]

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/309 (68%), Positives = 249/309 (80%), Gaps = 10/309 (3%)

Query: 6   SNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV 65
           S   MAWNVFK+CT LR LGS+MIL+VLG++GV+YYAV +  YGPAL+ GGLDS+ AL V
Sbjct: 4   SGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYAGGLDSLVALAV 63

Query: 66  LFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSA 125
           L LFHSLLVML+WSYFSVV TDPG VPPNW P +DEE G A    G++   V        
Sbjct: 64  LILFHSLLVMLLWSYFSVVFTDPGSVPPNWKPMIDEERGEADPLVGTEFSNV-------- 115

Query: 126 MLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFL 185
            L +P +Q VR+C+KCNQ KPPRCHHCSVC RC+LKMDHHCVWVVNCVGA NYK FLLFL
Sbjct: 116 -LSDP-NQRVRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKCFLLFL 173

Query: 186 FYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHIS 245
           FYTFLETTLVT SLLP FI  F+D EIP +PG+LA +F+ FVLNLAFALS+LGFLIMHIS
Sbjct: 174 FYTFLETTLVTASLLPHFITFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHIS 233

Query: 246 LVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCV 305
           LVA NTTTIEA+EKKT+PKWRYDLG + NFEQVFG +KKYW IPAYS +D+  +P+ Q +
Sbjct: 234 LVAANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSDEDIRKMPALQGL 293

Query: 306 EYPTRPDSD 314
           +YP++PD D
Sbjct: 294 DYPSKPDFD 302

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116786988|gb|ABK24332.1| unknown [Picea sitchensis]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/311 (66%), Positives = 248/311 (79%)

Query: 4   SSSNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITAL 63
             S + MAWNVFK+CT LR LGSVMIL+VLGI+GV+YYA+ +  YGPAL  GGL++  A 
Sbjct: 2   QRSGIVMAWNVFKFCTALRGLGSVMILLVLGIVGVTYYAIVITNYGPALQSGGLEAAGAF 61

Query: 64  FVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQ 123
           F+L LFH+LL ML+WSYF+VV+TDPGGVPPNW  N DEE G       S+  G  LG   
Sbjct: 62  FILILFHALLGMLLWSYFAVVLTDPGGVPPNWRANTDEERGETLPLTSSEFGGPGLGLQP 121

Query: 124 SAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLL 183
              L +P +  +R+C+KCNQ KPPRCHHCSVC RCILKMDHHCVWVVNCVGA NYK+FLL
Sbjct: 122 QMNLKDPSYSRIRYCRKCNQMKPPRCHHCSVCGRCILKMDHHCVWVVNCVGARNYKFFLL 181

Query: 184 FLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMH 243
           FLFYTF ETTLVT++LLP FIA F+++EI  +PG+LA +F+ FVLNLAFALS+LGFLIMH
Sbjct: 182 FLFYTFFETTLVTLALLPHFIAFFSEEEISGTPGSLATTFLGFVLNLAFALSVLGFLIMH 241

Query: 244 ISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQ 303
           ISLVAGNTTTIEA+EKKT+PKWRYDLG K NFEQVFG  K YWLIPAY ++DL  +P+  
Sbjct: 242 ISLVAGNTTTIEAYEKKTTPKWRYDLGRKRNFEQVFGTQKLYWLIPAYFEEDLRRMPALH 301

Query: 304 CVEYPTRPDSD 314
            +EYP++PD D
Sbjct: 302 GLEYPSKPDLD 312

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506038|ref|XP_003521795.1| PREDICTED: probable S-acyltransferase At3g60800-like [Glycine max]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/309 (68%), Positives = 246/309 (79%), Gaps = 10/309 (3%)

Query: 6   SNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV 65
           S   MAWNVFK+CT LR LGS+MIL+VLG++G +YYAV +  YGPAL+ GGLDS+ AL V
Sbjct: 4   SGATMAWNVFKFCTALRGLGSIMILLVLGVVGATYYAVVLTNYGPALYAGGLDSLVALAV 63

Query: 66  LFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSA 125
           L LFHSLLVML+WSYFSVV TDPG VPPNW P +DEE G A    G++   +    N   
Sbjct: 64  LILFHSLLVMLLWSYFSVVFTDPGSVPPNWKPTIDEERGEADPLVGTEFSNLPSDPNPR- 122

Query: 126 MLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFL 185
                    VR+C+KCNQ KPPRCHHCSVC RC+LKMDHHCVWVVNCVGA NYKYFLLFL
Sbjct: 123 ---------VRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFL 173

Query: 186 FYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHIS 245
           FYTFLETTLVT SLLP FIA F+D EIP +PG+LA +F+ FVLNLAFALS+LGFLIMHIS
Sbjct: 174 FYTFLETTLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHIS 233

Query: 246 LVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCV 305
           LVA NTTTIEA+EKKT+PKWRYDLG + NFEQVFG +KKYW IPAYS +D+  +P+ Q +
Sbjct: 234 LVAANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSDEDIRKMPALQGL 293

Query: 306 EYPTRPDSD 314
           +YP++PD D
Sbjct: 294 DYPSKPDFD 302

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638237|gb|ACU19432.1| unknown [Glycine max]

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/307 (64%), Positives = 241/307 (78%), Gaps = 9/307 (2%)

Query: 6   SNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV 65
           S   MAWNVF++CT LR LGS+MIL+VLG++GV+YYAV +  +GPALFLGGLD++ +  V
Sbjct: 4   SGAGMAWNVFRFCTALRGLGSIMILMVLGVVGVTYYAVVLTNFGPALFLGGLDTLISFVV 63

Query: 66  LFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSA 125
           L LFH LLVML+W YF+VV  DPG VPPNW P  DEE G          +GV+L   QS 
Sbjct: 64  LILFHCLLVMLLWCYFAVVFMDPGTVPPNWKPAADEERGEVDPL-----NGVELSNLQS- 117

Query: 126 MLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFL 185
              +  +Q  R+C+KC+Q KPPRCHHCSVC RC+LKMDHHCVWVVNCVGA NYKYFLLFL
Sbjct: 118 ---DSANQRFRYCRKCSQPKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFL 174

Query: 186 FYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHIS 245
            YTFLETTLVT+SLLP F   F+D EIP +PG LA +F+TFVLNLAF+LS+LGFL++H+S
Sbjct: 175 VYTFLETTLVTISLLPHFKTYFSDGEIPGTPGTLATTFLTFVLNLAFSLSVLGFLVLHVS 234

Query: 246 LVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCV 305
           LVA NTTTIEA+EKKT+ KWRYDLG + NFEQVFG +K+YW IPAYS++D+  +P  Q +
Sbjct: 235 LVASNTTTIEAYEKKTTSKWRYDLGRRKNFEQVFGMDKRYWFIPAYSEEDIRRMPVLQGL 294

Query: 306 EYPTRPD 312
           EYP+ PD
Sbjct: 295 EYPSTPD 301

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074717|ref|XP_002304438.1| predicted protein [Populus trichocarpa] gi|222841870|gb|EEE79417.1| predicted protein [Populus trichocarpa]

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/307 (71%), Positives = 253/307 (82%)

Query: 10  MAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLF 69
           MAWNVFK+CT LRALGS+MI++VLGIIGV+YY + VA YGPALF GGLDS  A  VL LF
Sbjct: 1   MAWNVFKFCTALRALGSIMIVLVLGIIGVTYYVIVVANYGPALFHGGLDSFVAFLVLVLF 60

Query: 70  HSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIE 129
           HSLLVML+WSYF+ V+TDPGGVPPNW P++DEESG A    G   +G DLG NQ A   E
Sbjct: 61  HSLLVMLLWSYFTTVLTDPGGVPPNWRPSIDEESGDADPLVGLGYEGTDLGLNQPATFGE 120

Query: 130 PKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTF 189
           P +  +R C+KCNQ KPPRCHHCSVC RCILKMDHHCVWVVNCVGA NYKYFLLFLFYTF
Sbjct: 121 PANPQLRVCRKCNQCKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLFYTF 180

Query: 190 LETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAG 249
           L TTLVT+SLL +FIA FTD  I  +PG L A+F+TFVLNL+FALSI+GFL+MHISLV G
Sbjct: 181 LLTTLVTLSLLRLFIAFFTDGVINGTPGTLVATFVTFVLNLSFALSIMGFLVMHISLVLG 240

Query: 250 NTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPT 309
           NTTTIEAFEKKT+PKWRYDLG + NFEQVFG +K+ W IPAYS++DLE +P  +  EYPT
Sbjct: 241 NTTTIEAFEKKTNPKWRYDLGRRKNFEQVFGVDKRCWFIPAYSEEDLECMPVLRGFEYPT 300

Query: 310 RPDSDDL 316
           RPD D+L
Sbjct: 301 RPDLDEL 307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129994|ref|XP_002320722.1| predicted protein [Populus trichocarpa] gi|222861495|gb|EEE99037.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/307 (68%), Positives = 250/307 (81%), Gaps = 11/307 (3%)

Query: 10  MAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLF 69
           MAWNVFK+CT LR LGS+MIL+VLG++GV+YYAV +  YGPAL+ GG+DS+ +L VL  F
Sbjct: 8   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLNNYGPALYDGGIDSLVSLAVLIPF 67

Query: 70  HSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIE 129
           HSLLVML+WSYFSVV+TDPG VPPNW P +DEE G A    GS+  GV   ++QS     
Sbjct: 68  HSLLVMLLWSYFSVVLTDPGSVPPNWRPAIDEERGEADPLNGSEFSGVQ--SDQS----- 120

Query: 130 PKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTF 189
             +Q +R+C+KCNQ KPPRCHHCSVC RC+LKMDHHCVWVVNCVGA NYKYFLLFLFYTF
Sbjct: 121 --NQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTF 178

Query: 190 LETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAG 249
           LET+LVT+SL P FIA F+D EIP +PG LA +F+ FVLNLAFALS+LGFLIMHISLV+ 
Sbjct: 179 LETSLVTLSLSPHFIAFFSDGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSA 238

Query: 250 NTTTIEAFEKKTSPKWRYDLGWKINFEQ--VFGKNKKYWLIPAYSKDDLEWLPSFQCVEY 307
           NTTTIEA+EKKT+PKWRYDLG K NFEQ  VFG +K+YW IP YS DDL  +P+ Q +EY
Sbjct: 239 NTTTIEAYEKKTTPKWRYDLGRKKNFEQASVFGADKRYWFIPTYSDDDLRRMPALQGLEY 298

Query: 308 PTRPDSD 314
           P++PD D
Sbjct: 299 PSKPDFD 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453943|ref|XP_002279896.1| PREDICTED: probable S-acyltransferase At3g60800 [Vitis vinifera] gi|147867112|emb|CAN80505.1| hypothetical protein VITISV_010744 [Vitis vinifera]

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 247/309 (79%), Gaps = 9/309 (2%)

Query: 6   SNLNMAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFV 65
           S   MAWNVFK+CT LR LGS+MIL+VLG++GV+YYAV +  YGPAL+ GGL S+ A+ V
Sbjct: 4   SGAVMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTSYGPALYDGGLTSVIAVAV 63

Query: 66  LFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSA 125
           L LFH LLVML+WSYFSVV+TDPGGVPPNW P +DEE G      G    G D G + + 
Sbjct: 64  LILFHGLLVMLLWSYFSVVLTDPGGVPPNWRPIMDEERG-----EGDPLTGSDFGVSPA- 117

Query: 126 MLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFL 185
              +   Q VR+C+KC+Q KPPRCHHCSVC RCILKMDHHCVWVVNCVGA NYKYFLLFL
Sbjct: 118 ---DASKQRVRYCRKCSQMKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFL 174

Query: 186 FYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHIS 245
           FYTFLET+LVT+SLLP FIA FT+ EIP SPG LA +F+ FVLNLAFALS++GFLIMHIS
Sbjct: 175 FYTFLETSLVTLSLLPHFIAFFTEGEIPGSPGTLATTFLAFVLNLAFALSVMGFLIMHIS 234

Query: 246 LVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCV 305
           +VA NTTTIEA+EKKT+ KWRYDLG K NFEQVFG +K YW IPAY+++DL  +P  Q +
Sbjct: 235 MVAANTTTIEAYEKKTTLKWRYDLGRKKNFEQVFGTDKLYWFIPAYTEEDLRRMPVLQGL 294

Query: 306 EYPTRPDSD 314
           E+P++PD D
Sbjct: 295 EFPSKPDLD 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357469609|ref|XP_003605089.1| Palmitoyltransferase pfa3 [Medicago truncatula] gi|355506144|gb|AES87286.1| Palmitoyltransferase pfa3 [Medicago truncatula]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/306 (63%), Positives = 235/306 (76%), Gaps = 15/306 (4%)

Query: 10  MAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLF 69
           MAWNVFK+CT LR LGS+MIL+VLG++GV+YYAV +  Y P+L+ GG DS+ A+ VL LF
Sbjct: 1   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVITNYVPSLYNGGFDSLIAVLVLILF 60

Query: 70  HSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIE 129
           H+LLVML+WSYFSVV  DPG VPPNW P +DEE G      GS+   V           +
Sbjct: 61  HALLVMLLWSYFSVVFIDPGSVPPNWRPTIDEERGEEDPLVGSEFSNVQ---------CD 111

Query: 130 PKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTF 189
           P +Q +R+C+KCNQ KPPRCHHCSVC RC+LKMDHHCVWVVNCVGA NY + L       
Sbjct: 112 PSNQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYNFILS------ 165

Query: 190 LETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAG 249
           L T+LVT SLLP FIA F+D EIP +P +LA +F+ FVLNLAFALS++GFLIMHISLVA 
Sbjct: 166 LSTSLVTASLLPHFIAFFSDGEIPGTPSSLATTFLAFVLNLAFALSVMGFLIMHISLVAA 225

Query: 250 NTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPT 309
           NTTTIEA+EKKT+PKWRYDLG + NFEQVFG +KKYW IPAYS++D+  +P+ Q +EYP+
Sbjct: 226 NTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSEEDVRRMPALQGLEYPS 285

Query: 310 RPDSDD 315
           +PD D 
Sbjct: 286 KPDFDS 291

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089167|emb|CBI38870.3| unnamed protein product [Vitis vinifera]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/305 (68%), Positives = 246/305 (80%), Gaps = 9/305 (2%)

Query: 10  MAWNVFKYCTVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLF 69
           MAWNVFK+CT LR LGS+MIL+VLG++GV+YYAV +  YGPAL+ GGL S+ A+ VL LF
Sbjct: 1   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTSYGPALYDGGLTSVIAVAVLILF 60

Query: 70  HSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIE 129
           H LLVML+WSYFSVV+TDPGGVPPNW P +DEE G      GSD      G + +    +
Sbjct: 61  HGLLVMLLWSYFSVVLTDPGGVPPNWRPIMDEERGEGDPLTGSD-----FGVSPA----D 111

Query: 130 PKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTF 189
              Q VR+C+KC+Q KPPRCHHCSVC RCILKMDHHCVWVVNCVGA NYKYFLLFLFYTF
Sbjct: 112 ASKQRVRYCRKCSQMKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLFYTF 171

Query: 190 LETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAG 249
           LET+LVT+SLLP FIA FT+ EIP SPG LA +F+ FVLNLAFALS++GFLIMHIS+VA 
Sbjct: 172 LETSLVTLSLLPHFIAFFTEGEIPGSPGTLATTFLAFVLNLAFALSVMGFLIMHISMVAA 231

Query: 250 NTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPT 309
           NTTTIEA+EKKT+ KWRYDLG K NFEQVFG +K YW IPAY+++DL  +P  Q +E+P+
Sbjct: 232 NTTTIEAYEKKTTLKWRYDLGRKKNFEQVFGTDKLYWFIPAYTEEDLRRMPVLQGLEFPS 291

Query: 310 RPDSD 314
           +PD D
Sbjct: 292 KPDLD 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
TAIR|locus:2101806	307	AT3G60800 "AT3G60800" [Arabido	0.955	0.983	0.553	6.5e-90
TAIR|locus:2132654	324	AT4G22750 [Arabidopsis thalian	0.924	0.901	0.487	4e-74
TAIR|locus:2134643	291	AT4G00840 [Arabidopsis thalian	0.905	0.982	0.419	2.2e-59
ZFIN|ZDB-GENE-091117-30	397	si:dkey-11p10.6 "si:dkey-11p10	0.731	0.581	0.340	2e-33
ZFIN|ZDB-GENE-070424-38	357	zgc:162723 "zgc:162723" [Danio	0.674	0.596	0.336	2.6e-31
UNIPROTKB|F1P165	359	ZDHHC20 "Uncharacterized prote	0.670	0.590	0.343	1.1e-30
UNIPROTKB|E2REV5	365	ZDHHC20 "Uncharacterized prote	0.674	0.583	0.336	7.9e-30
UNIPROTKB|E2RKX3	432	ZDHHC20 "Uncharacterized prote	0.674	0.493	0.336	7.9e-30
UNIPROTKB|B4DRN8	292	ZDHHC20 "cDNA FLJ60835, highly	0.674	0.729	0.336	1.6e-29
UNIPROTKB|Q2TB82	320	ZDHHC20 "Probable palmitoyltra	0.674	0.665	0.336	1.6e-29

TAIR|locus:2101806 AT3G60800 "AT3G60800" [Arabidopsis thaliana (taxid:3702)]

 Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
 Identities = 171/309 (55%), Positives = 201/309 (65%)

Query:     6 SNLNMAWNVFKYCTVLRAXXXXXXXXXXXXXXXXYYAVAVAKYGPALFLGGLDSITAXXX 65
             S   MAWNVFK+CT LR                 YYAV +  YGPAL  GGLDS+ A   
Sbjct:     4 SGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAALTI 63

Query:    66 XXXXXXXXXXXXWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSA 125
                         WSYFSVV TDPG VPPNW P+ DEE G +      D  G+   ++ S 
Sbjct:    64 LILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSSSS- 122

Query:   126 MLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXX 185
                 P+   VRFC+KCNQ KP RCHHCSVC RC+LKMDHHCVWVVNCVGA NYK      
Sbjct:   123 ---NPR---VRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFL 176

Query:   186 XXXXXXXXXXXXSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHIS 245
                          L+P FIA F+D+EIP +PG LA +F+ FVLNLAFALS++GFLIMHIS
Sbjct:   177 FYTFLETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAFVLNLAFALSVMGFLIMHIS 236

Query:   246 LVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCV 305
             LVAGNTTTIEA+EKKT+ KWRYDLG K NFEQVFG +K+YWLIP Y+++DL  +P  Q +
Sbjct:   237 LVAGNTTTIEAYEKKTTTKWRYDLGKKKNFEQVFGMDKRYWLIPGYTEEDLRRMPELQGL 296

Query:   306 EYPTRPDSD 314
             EYP++PD D
Sbjct:   297 EYPSKPDFD 305

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2132654 AT4G22750 [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 161/330 (48%), Positives = 194/330 (58%)

Query:    10 MAWNVFKYCTVLRAXXXXXXXXXXXXXXXXYYAVAVAKYGPALFLGGLDSI--------- 60
             MAWNVFK+CT LRA                YYAV V  YGPAL +GG+DS+         
Sbjct:     1 MAWNVFKFCTALRALGSIMILIVIGIIGFTYYAVVVVNYGPALLIGGVDSLLSVLVLAFF 60

Query:    61 -------------TAXXXXXXXXXXXXXXXWSYFSVVITDPGGVPPNWIPNLD-EESGGA 106
                          T                WSYFSVV+TDPGGVP  W P LD E+S G 
Sbjct:    61 HFLWAQSSLACGFTFVLSTFELPRILIMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGN 120

Query:   107 GQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHC 166
                 G       +G + S       H GVR+C+KCNQ+KPPR HHCSVC RCILKMDHHC
Sbjct:   121 QALIGE----ASVGDSSS-------H-GVRYCRKCNQYKPPRSHHCSVCGRCILKMDHHC 168

Query:   167 VWVVNCVGAFNYKXXXXXXXXXXXXXXXXXXSLLPIFIALFTDDE--IPESPGNLAASFI 224
             VWVVNCVGA NYK                  SLLPIF+  F+D +  I  SPG+LAASF+
Sbjct:   169 VWVVNCVGANNYKSFLLFLFYTFLETTVVAVSLLPIFLVFFSDGDGDITVSPGSLAASFV 228

Query:   225 TFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKK 284
              FVLN+AFALS+LGFLIMHI LVA NTTTIEA+EK T   W Y++G K NFEQVFG +K 
Sbjct:   229 AFVLNIAFALSVLGFLIMHIMLVARNTTTIEAYEKHTV-NWPYNVGRKTNFEQVFGSDKM 287

Query:   285 YWLIPAYSKDDLEWLPSFQCVEYPTRPDSD 314
             YW +P Y++DD + LP+   +++ +R +S+
Sbjct:   288 YWFVPLYTEDDKKKLPALGGLDFTSRSESE 317

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2134643 AT4G00840 [Arabidopsis thaliana (taxid:3702)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 128/305 (41%), Positives = 166/305 (54%)

Query:    13 NVFKYCTVLRAXXXXXXXXXXXXXXXXYYAVAVAKYGPALFLG--GLDSITAXXXXXXXX 70
             N+F++C+ L+                 YYAV V+ + P L  G  G  S  A        
Sbjct:     2 NLFRFCSGLKVLGYFMILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALIIFVFH 61

Query:    71 XXXXXXXWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEP 130
                    WSYF+ V TDPG VP ++     E  GG    AG+  D    G+         
Sbjct:    62 FLLIMLLWSYFTTVFTDPGSVPEHF---RREMGGGDSLEAGTSTDQGAFGS--------- 109

Query:   131 KHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXX 190
                 + +C KC   KPPRCHHCSVC+RC+LKMDHHCVW+VNCVGA NYK           
Sbjct:   110 ----LGYCTKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFL 165

Query:   191 XXXXXXXSLLPIFIALFTDD-EIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAG 249
                     LLP FI  F+   +   SPG LA+  + FVLN AF LS+L F++MHISL++ 
Sbjct:   166 ETMLDVIVLLPSFIEFFSQAIKHSSSPGKLASLVLAFVLNFAFVLSLLCFVVMHISLLSS 225

Query:   250 NTTTIEAFEKKTSPKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPT 309
             NTT++E  EK    +W+YDLG K NFEQVFGK K +WL+P YSKDD++ + S + +E+PT
Sbjct:   226 NTTSVEVHEKNGEVRWKYDLGKKKNFEQVFGKKKAFWLLPLYSKDDIDNITSLEGLEFPT 285

Query:   310 RPDSD 314
               D D
Sbjct:   286 CSDID 290

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-091117-30 si:dkey-11p10.6 "si:dkey-11p10.6" [Danio rerio (taxid:7955)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 82/241 (34%), Positives = 114/241 (47%)

Query:    78 WSYFSVVITDPGGVPPNW-IPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR 136
             WSY+  + T P      + +P  ++E     Q   +  + +   A    +        +R
Sbjct:    96 WSYWKTIFTKPANPSKEFCLPKSEKEQYEKEQRPETQQEILKKVATSLPLYTRTGAGAIR 155

Query:   137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXXXXXXXX 196
             +C +C   KP RCHHCS C  C+LKMDHHC WV NCVG  NYK                 
Sbjct:   156 YCDRCQVIKPDRCHHCSACDMCVLKMDHHCPWVNNCVGFSNYKFFILFLTYSLVYCLFIA 215

Query:   197 XSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEA 256
              S+L  FI  +T D +PES       F+ FV  + F +SIL     H+ LV  N +TIEA
Sbjct:   216 ASVLQYFIKFWTSD-LPESHAKFHVLFLFFVAAM-FCISILSLFTYHLWLVGKNRSTIEA 273

Query:   257 FEK---KTSP-KWRYDLGWKINFEQVFGKNKKYWLIPAYSK--DDLEWLPSFQCVEYPTR 310
             F     +  P K  + LG+  N  QVFG  KKYWL+P ++   D L +      ++ P +
Sbjct:   274 FRAPVFRNGPDKNGFSLGFSKNIAQVFGDEKKYWLLPVFTSQGDGLSFPTRLVTID-PEQ 332

Query:   311 P 311
             P
Sbjct:   333 P 333

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-070424-38 zgc:162723 "zgc:162723" [Danio rerio (taxid:7955)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 74/220 (33%), Positives = 109/220 (49%)

Query:    78 WSYFSVVITDPGGVPPNW-IPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR 136
             WSY+  + + P      + +P  ++E     +   +  D +   A +  +        +R
Sbjct:    64 WSYWKTISSKPTNPSKEFCLPKAEKELYEKEERPEAQQDILKRVARELPIYTFTGSGAIR 123

Query:   137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXXXXXXXX 196
             +C +C   KP RCHHCS C +C+LKMDHHC WV NCVG  NYK                 
Sbjct:   124 YCDRCQLIKPDRCHHCSTCDKCVLKMDHHCPWVNNCVGFSNYKFFVLFLAYSMLYCVYIA 183

Query:   197 XSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEA 256
              ++L  FI  +T+ ++P++       F+ FV  + F +SIL     H+ LV  N TTIEA
Sbjct:   184 ATVLQYFIKFWTN-QLPDTHAKFHVLFLFFVAAMFF-ISILSLFSYHLWLVGKNRTTIEA 241

Query:   257 FEK---KTSP-KWRYDLGWKINFEQVFGKNKKYWLIPAYS 292
             F     +  P K  + LG++ N  QVFG  KKYW +P +S
Sbjct:   242 FRAPVFRNGPDKNGFTLGFRKNITQVFGDQKKYWCLPIFS 281

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1P165 ZDHHC20 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 76/221 (34%), Positives = 104/221 (47%)

Query:    78 WSYFSVVITDPGGVPPN--WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGV 135
             WSY   + T P   P N   +   D+E     +   S  + +   A    +      + +
Sbjct:    60 WSYGKTIFTSPAS-PSNEFCLSKADKEQYEKEERPESQQEILRRAAKDLPIYTTTASRAI 118

Query:   136 RFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXXXXXXX 195
             R+C +C   KP RCHHCS C  C+LKMDHHC WV NCVG  NYK                
Sbjct:   119 RYCDRCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFV 178

Query:   196 XXSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIE 255
               ++L  FI  +T+ E+P++       F+ FV  + F +SIL     H  LV  N +TIE
Sbjct:   179 AATVLQYFIKFWTN-ELPDTHAKFHVLFLFFVAAMFF-ISILSLFSYHCWLVGKNRSTIE 236

Query:   256 AFEKKT---SP-KWRYDLGWKINFEQVFGKNKKYWLIPAYS 292
              F   T    P K  + LG   N  +VFG  KKYWL+P ++
Sbjct:   237 TFRAPTFRNGPDKNGFSLGCSKNLREVFGDEKKYWLLPIFT 277

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2REV5 ZDHHC20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 74/220 (33%), Positives = 103/220 (46%)

Query:    78 WSYFSVVITDPGGVPPN-WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR 136
             WSY+  + T P       ++ N ++E            + +   A    +      + +R
Sbjct:    67 WSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASRTIR 126

Query:   137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXXXXXXXX 196
             +C+KC   KP R HHCS C  CILKMDHHC WV NCVG  NYK                 
Sbjct:   127 YCEKCQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVA 186

Query:   197 XSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEA 256
              ++L  FI  +T+ E+ ++       F+ FV  + F +S+L     H  LV  N TTIE+
Sbjct:   187 TTVLQYFIKFWTN-ELSDTRAKFHVLFLFFVSTMFF-ISVLSLFSYHCWLVGKNRTTIES 244

Query:   257 FEKKT---SPKWR-YDLGWKINFEQVFGKNKKYWLIPAYS 292
             F   T    P    + LG   N+ QVFG  KKYWL+P +S
Sbjct:   245 FRSPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFS 284

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RKX3 ZDHHC20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 74/220 (33%), Positives = 103/220 (46%)

Query:    78 WSYFSVVITDPGGVPPN-WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR 136
             WSY+  + T P       ++ N ++E            + +   A    +      + +R
Sbjct:   144 WSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASRTIR 203

Query:   137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXXXXXXXX 196
             +C+KC   KP R HHCS C  CILKMDHHC WV NCVG  NYK                 
Sbjct:   204 YCEKCQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVA 263

Query:   197 XSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEA 256
              ++L  FI  +T+ E+ ++       F+ FV  + F +S+L     H  LV  N TTIE+
Sbjct:   264 TTVLQYFIKFWTN-ELSDTRAKFHVLFLFFVSTMFF-ISVLSLFSYHCWLVGKNRTTIES 321

Query:   257 FEKKT---SPKWR-YDLGWKINFEQVFGKNKKYWLIPAYS 292
             F   T    P    + LG   N+ QVFG  KKYWL+P +S
Sbjct:   322 FRSPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFS 361

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|B4DRN8 ZDHHC20 "cDNA FLJ60835, highly similar to Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-)" [Homo sapiens (taxid:9606)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 74/220 (33%), Positives = 103/220 (46%)

Query:    78 WSYFSVVITDPGGVPPN-WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR 136
             WSY+  + T P       ++ N ++E            + +   A    +      + +R
Sbjct:     4 WSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARALPIYTTSASKTIR 63

Query:   137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXXXXXXXX 196
             +C+KC   KP R HHCS C  CILKMDHHC WV NCVG  NYK                 
Sbjct:    64 YCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVA 123

Query:   197 XSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEA 256
              ++L  FI  +T+ E+ ++       F+ FV +  F +S+L     H  LV  N TTIE+
Sbjct:   124 ATVLEYFIKFWTN-ELTDTRAKFHVLFLFFV-SAMFFISVLSLFSYHCWLVGKNRTTIES 181

Query:   257 FEKKT---SPKWR-YDLGWKINFEQVFGKNKKYWLIPAYS 292
             F   T    P    + LG   N+ QVFG  KKYWL+P +S
Sbjct:   182 FRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFS 221

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|Q2TB82 ZDHHC20 "Probable palmitoyltransferase ZDHHC20" [Homo sapiens (taxid:9606)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 74/220 (33%), Positives = 103/220 (46%)

Query:    78 WSYFSVVITDPGGVPPN-WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR 136
             WSY+  + T P       ++ N ++E            + +   A    +      + +R
Sbjct:    67 WSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARALPIYTTSASKTIR 126

Query:   137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKXXXXXXXXXXXXXXXXX 196
             +C+KC   KP R HHCS C  CILKMDHHC WV NCVG  NYK                 
Sbjct:   127 YCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVA 186

Query:   197 XSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEA 256
              ++L  FI  +T+ E+ ++       F+ FV +  F +S+L     H  LV  N TTIE+
Sbjct:   187 ATVLEYFIKFWTN-ELTDTRAKFHVLFLFFV-SAMFFISVLSLFSYHCWLVGKNRTTIES 244

Query:   257 FEKKT---SPKWR-YDLGWKINFEQVFGKNKKYWLIPAYS 292
             F   T    P    + LG   N+ QVFG  KKYWL+P +S
Sbjct:   245 FRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFS 284

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8VYP5	ZDH14_ARATH	2, ., 3, ., 1, ., -	0.6731	0.9556	0.9837	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_III000350 hypothetical protein (310 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	316
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	7e-46
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	6e-39

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  153 bits (387), Expect = 7e-46
 Identities = 69/185 (37%), Positives = 91/185 (49%), Gaps = 19/185 (10%)

Query: 77  VWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR 136
           +WSYF  + TDPG VP N      E+        G + D +                  +
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDEL------------------K 42

Query: 137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVT 196
           FC  CN  KPPR HHC VC RC+L+ DHHC W+ NC+G  N+KYFLLFL Y  L   L+ 
Sbjct: 43  FCSTCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLL 102

Query: 197 VSLLPIFIALFTDDEIPES-PGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIE 255
           V      + L  + E+      +L +S I  VL+L F L +   L  H+ L+  N TT E
Sbjct: 103 VLSFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYE 162

Query: 256 AFEKK 260
             +KK
Sbjct: 163 YIKKK 167

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score =  139 bits (351), Expect = 6e-39
 Identities = 77/303 (25%), Positives = 112/303 (36%), Gaps = 55/303 (18%)

Query: 19  TVLRALGSVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVW 78
                   + I + L    V Y  + + K    + L  +          LF  +LV+  +
Sbjct: 22  RTGLYAYKMFIGLFLLSRIVVYTLLVIVKSLSLVVLFII----------LFIVILVLASF 71

Query: 79  SYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFC 138
           SY  ++++DPG +  N                             S +L + K     FC
Sbjct: 72  SYLLLLVSDPGYLGEN-------------------ITLSGYRETISRLLDDGKFGTENFC 112

Query: 139 QKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVS 198
             CN +KPPR HHCS+C RC+LK DHHC W+ NCVG  NY++F  FL YT L   +V +S
Sbjct: 113 STCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLS 172

Query: 199 LLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFE 258
                  +F+              F   +L + F +     L+  I L+  N TTIE  +
Sbjct: 173 TAYYIAGIFSIRHDTSLAICFLI-FGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQ 231

Query: 259 KKTSPK-------------------------WRYDLGWKINFEQVFGKNKKYWLIPAYSK 293
                                             DLG   N   + G N  YWL P ++ 
Sbjct: 232 ISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKGSNALYWLTPLHTN 291

Query: 294 DDL 296
              
Sbjct: 292 YCN 294

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.97
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.95
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	94.22
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	90.48
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	87.47
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	84.62
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	83.27
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	82.67
PF13248	26	zf-ribbon_3: zinc-ribbon domain	82.1
PF06906	57	DUF1272: Protein of unknown function (DUF1272); In	80.64

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.2e-58  Score=420.74  Aligned_cols=254  Identities=40%  Similarity=0.736  Sum_probs=203.5

Q ss_pred             HHHHHHHHHHHHhheeeeeeeeeccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCCcccccC
Q 021223           26 SVMILVVLGIIGVSYYAVAVAKYGPALFLGGLDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGG  105 (316)
Q Consensus        26 ~~~v~~v~~li~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~i~~~~l~~~~~~sy~~~~~tdPG~vp~~~~~~~~~~~~~  105 (316)
                      +++++++.++++++||+++...+.+....+    ..+.+.+++++.++++.+|+|++++++|||.+|..+.++.++++..
T Consensus        13 ~~~~~~i~~~~~~~yy~~v~~~c~~~i~~~----~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~   88 (307)
T KOG1315|consen   13 WIPVLIILLVIGWTYYVYVAVLCILSISLT----IPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSL   88 (307)
T ss_pred             chhheeeeeeEEEEEEEeehhhhHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccc
Confidence            899999999999999999998887755322    4667788899999999999999999999999999998876654332


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCccceecccccccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHH
Q 021223          106 AGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFL  185 (316)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL  185 (316)
                      +..... |        ........+..++.|+|.+|+.+|||||||||+|+|||+||||||||+|||||.+|||+|++|+
T Consensus        89 ~~~~~~-~--------~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl  159 (307)
T KOG1315|consen   89 ENGSDN-E--------RDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFL  159 (307)
T ss_pred             cccCcc-c--------ccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHH
Confidence            211100 0        1111233456789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHhhhhhcCC---
Q 021223          186 FYTFLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKTS---  262 (316)
Q Consensus       186 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~h~~li~~n~TT~E~~~~~~~---  262 (316)
                      +|+.+++.+..+.....+..++... ...+......+.+.+++.+.+++.+++|+++|++||++|+||+|.++.+.-   
T Consensus       160 ~y~~l~~~~~lv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~~~~  238 (307)
T KOG1315|consen  160 FYTNLYSIYVLVTTLIGFTKYFQGG-AGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSPVFRSG  238 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc-ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhcccccccc
Confidence            9999999988887777777766322 222222334445556677888888889999999999999999999987533   


Q ss_pred             --CCCCCchhHHHHHHHhcCCCccceeeccccCCC
Q 021223          263 --PKWRYDLGWKINFEQVFGKNKKYWLIPAYSKDD  295 (316)
Q Consensus       263 --~~~~yd~G~~~N~~~vfG~~~~~W~~P~~~~~~  295 (316)
                        ..+.+++  ..|++|+||+++..|++|+.++.+
T Consensus       239 ~~~~~~~~~--~~n~~~vfg~~~~~wl~P~~~s~~  271 (307)
T KOG1315|consen  239 LHNKNGFNL--YVNFREVFGSNLLYWLLPIDSSWG  271 (307)
T ss_pred             ccccCCcce--eecHHHHhCCCceEEeccccCccc
Confidence              3445554  679999999999999999988765

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=2.6e-49  Score=354.68  Aligned_cols=214  Identities=31%  Similarity=0.622  Sum_probs=162.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccccccccccCCCccce
Q 021223           57 LDSITALFVLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVR  136 (316)
Q Consensus        57 ~~~~~~~~~~i~~~~l~~~~~~sy~~~~~tdPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (316)
                      .++..+....+.|-+...|++++|+.+++++||++|.+|.|+...                             +..-.+
T Consensus        42 ~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~-----------------------------D~~~lq   92 (414)
T KOG1314|consen   42 LSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPK-----------------------------DEMFLQ   92 (414)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCh-----------------------------hHHHHH
Confidence            455666777778888899999999999999999999999886533                             134578


Q ss_pred             ecccccccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHh----c
Q 021223          137 FCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSL----LPIFIALF----T  208 (316)
Q Consensus       137 ~C~~C~~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~~~----~~~~~~~~----~  208 (316)
                      ||.+|+.+|+||||||+.|||||++|||||||+|||||..||.||..||++..++|+-..+.+    ...++..|    .
T Consensus        93 fCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~Iy~~W~~~~g  172 (414)
T KOG1314|consen   93 FCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGIYFRWYIKYG  172 (414)
T ss_pred             HHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999999999999988766433222    11222222    1


Q ss_pred             CCCCCC---CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHhhhhhc--------------CCCCCCCchhH
Q 021223          209 DDEIPE---SPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKK--------------TSPKWRYDLGW  271 (316)
Q Consensus       209 ~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~l~~~h~~li~~n~TT~E~~~~~--------------~~~~~~yd~G~  271 (316)
                      ....+.   +...++..++++.++++..+++..|++.|+..|.+|+|.||.+.-+              .....|||+|+
T Consensus       173 ~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~~~d~~~~f~ypydlgW  252 (414)
T KOG1314|consen  173 LRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREYYFNDDEGEFTYPYDLGW  252 (414)
T ss_pred             cccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhhccCCCCceeeeccccc
Confidence            111111   1122333444445555566667778889999999999999987511              12357999999


Q ss_pred             HHHHHHhcCCCccceeeccccCCCCCCCCCCCceeccCCCCCC
Q 021223          272 KINFEQVFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPTRPDSD  314 (316)
Q Consensus       272 ~~N~~~vfG~~~~~W~~P~~~~~~~~~~p~~dG~~~~~~~~~~  314 (316)
                      +.|++|||-.+.               .+.|||+.||+.++++
T Consensus       253 r~n~r~vf~~~~---------------~~~gdg~~wPv~~gc~  280 (414)
T KOG1314|consen  253 RINLREVFFQNK---------------KEEGDGIEWPVVEGCV  280 (414)
T ss_pred             cccHHHHhhhcc---------------ccCCCCccccccCccc
Confidence            999999997643               2458999999999875

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=2e-44  Score=333.64  Aligned_cols=179  Identities=32%  Similarity=0.621  Sum_probs=138.1

Q ss_pred             CCCccceecccccccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 021223          130 PKHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTD  209 (316)
Q Consensus       130 ~~~~~~~~C~~C~~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~~~~~~~~~~~~~  209 (316)
                      +...+.+||.+|+.+||||||||+.||+||+||||||||+|||||++|||+|+.|+++..+.+++........+.....+
T Consensus       108 ~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~  187 (299)
T KOG1311|consen  108 GIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADN  187 (299)
T ss_pred             CcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            45678999999999999999999999999999999999999999999999999999999998888877766655543332


Q ss_pred             CCC--C--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHhhhhh-cCCCC-CCCchhHHHHHHHhcCCCc
Q 021223          210 DEI--P--ESPGNLAASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEK-KTSPK-WRYDLGWKINFEQVFGKNK  283 (316)
Q Consensus       210 ~~~--~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~h~~li~~n~TT~E~~~~-~~~~~-~~yd~G~~~N~~~vfG~~~  283 (316)
                      ...  .  ..+......++..++++.+.+.+++++.+|+++|.+|+||+|..++ +.+.+ ++||.|..+|++++||.+.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~~n~~~~~~~~~  267 (299)
T KOG1311|consen  188 LKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLLKNLQEVFGGPL  267 (299)
T ss_pred             ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHHHHHHHHhCCCC
Confidence            211  1  1122222333344566667777788999999999999999999884 33334 8999999999999999984


Q ss_pred             -cceeeccccCCCCCCCCCCCceeccCCCC
Q 021223          284 -KYWLIPAYSKDDLEWLPSFQCVEYPTRPD  312 (316)
Q Consensus       284 -~~W~~P~~~~~~~~~~p~~dG~~~~~~~~  312 (316)
                       +.|.-|...+.   ..| .||-.++....
T Consensus       268 ~~~~~~p~~~~~---~~p-~~~~~~~~~~~  293 (299)
T KOG1311|consen  268 PLSWLSPFARSG---PLP-HDGEGGPPTPH  293 (299)
T ss_pred             CcccccccccCC---CCC-CCCCCCCcccc
Confidence             66998876542   223 57766665543

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=2.3e-41  Score=289.29  Aligned_cols=172  Identities=30%  Similarity=0.584  Sum_probs=123.1

Q ss_pred             HHHhhhcccCCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccccccccccCCCccceecccccccCCCCCccCcccCc
Q 021223           78 WSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQFKPPRCHHCSVCRR  157 (316)
Q Consensus        78 ~sy~~~~~tdPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~RahHC~~C~~  157 (316)
                      ++|++++++|||++|+....+.+.+. +....          ...+.....++...+.++|.+|+..||+|||||+.||+
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~   70 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQE-EKEEE----------QNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNR   70 (174)
T ss_pred             EEehhhheECCcccCCcccccccccc-ccccc----------cchhhhhhccccCCCCEECcccCCcCCCcceecccccc
Confidence            57899999999999976221111110 00000          00011112234577899999999999999999999999


Q ss_pred             cccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-cchhHHHHHHHHHHHHHHHH
Q 021223          158 CILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESP-GNLAASFITFVLNLAFALSI  236 (316)
Q Consensus       158 CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~  236 (316)
                      ||+||||||||+|||||++|||+|++|+++..+.+++.....+..+............. ......++.+++++++++++
T Consensus        71 CV~~~DHHC~w~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (174)
T PF01529_consen   71 CVLRFDHHCPWLGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFV  150 (174)
T ss_pred             ccccccccchhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998888776665555544332111111 11111144445566777788


Q ss_pred             HHHHHHHHHHHhcCcchHhhhhhc
Q 021223          237 LGFLIMHISLVAGNTTTIEAFEKK  260 (316)
Q Consensus       237 ~~l~~~h~~li~~n~TT~E~~~~~  260 (316)
                      +++++.|+++|++|+||+|.+|+|
T Consensus       151 ~~l~~~~~~~i~~n~Tt~E~~~~~  174 (174)
T PF01529_consen  151 GFLLIFQLYLILRNITTYERIKRK  174 (174)
T ss_pred             HHHHHHHHHHHHcCCcHHHHHHcC
Confidence            889999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=1.1e-40  Score=290.59  Aligned_cols=178  Identities=29%  Similarity=0.552  Sum_probs=132.1

Q ss_pred             cceecccccccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C-
Q 021223          134 GVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFT---D-  209 (316)
Q Consensus       134 ~~~~C~~C~~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~~~~~~~~~~~~---~-  209 (316)
                      ...+|.+|..+|||||||||.|||||++|||||||+|||||.+|||||++|++|+.+++.+..+...+...+...   + 
T Consensus       101 ~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~  180 (309)
T KOG1313|consen  101 NDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEI  180 (309)
T ss_pred             cccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            357999999999999999999999999999999999999999999999999999999999987765444433211   1 


Q ss_pred             CCCCC------CCcchh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHhhhhhcC--------CCCCC
Q 021223          210 DEIPE------SPGNLA---------ASFITFVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKT--------SPKWR  266 (316)
Q Consensus       210 ~~~~~------~~~~~~---------~~~l~~~~~~~~~~~~~~l~~~h~~li~~n~TT~E~~~~~~--------~~~~~  266 (316)
                      .....      .|..+.         -+.-..+++..+.++++.+..+|.++|.+|.|++|.+...+        ..+||
T Consensus       181 tay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a~~R~~~  260 (309)
T KOG1313|consen  181 TAYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLINIKERKRYLAHLRSNP  260 (309)
T ss_pred             ccccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHHHHHHhHhHHHhccCCC
Confidence            01111      111111         01123345555667778888999999999999999874321        23689


Q ss_pred             CchhHHHHHHHhcCCC--ccceeeccccCCCCCCCCCCCceeccCCCCCC
Q 021223          267 YDLGWKINFEQVFGKN--KKYWLIPAYSKDDLEWLPSFQCVEYPTRPDSD  314 (316)
Q Consensus       267 yd~G~~~N~~~vfG~~--~~~W~~P~~~~~~~~~~p~~dG~~~~~~~~~~  314 (316)
                      |+.|.++||+.++|-.  +-.|..-.-|+   .+.|.+.|.+||++|..+
T Consensus       261 ~n~g~k~nWr~fLg~~~~r~~wk~v~lPt---~~~p~~~~~~~~~~da~~  307 (309)
T KOG1313|consen  261 TNFGGKANWRNFLGLFRGRHFWKTVLLPT---IRKPVKYGDSKEKSDAYD  307 (309)
T ss_pred             cccchHHHHHHhhccccCCceeEEEeccc---cccccccCCcccccchhh
Confidence            9999999999999976  33576422222   356789999999877644

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=6.1e-39  Score=295.66  Aligned_cols=220  Identities=34%  Similarity=0.624  Sum_probs=156.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCCcccccCCCCCCCCCCCCCccccccccccccCCCccceeccccccc
Q 021223           65 VLFLFHSLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQGVRFCQKCNQF  144 (316)
Q Consensus        65 ~~i~~~~l~~~~~~sy~~~~~tdPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~  144 (316)
                      ..+.+.+.+.+...+|++.+++|||+.+++-.....++..+                   ....++..+..++|.+|+.+
T Consensus        58 ~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~C~~C~~~  118 (309)
T COG5273          58 FIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETIS-------------------RLLDDGKFGTENFCSTCNIY  118 (309)
T ss_pred             hhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhh-------------------hhhhcCccccceeccccccc
Confidence            34455566778888999999999999985422111111110                   11233557789999999999


Q ss_pred             CCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcch-hHHH
Q 021223          145 KPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPESPGNL-AASF  223 (316)
Q Consensus       145 kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  223 (316)
                      ||+|||||+.|||||+||||||||+|||||++|||+|++||+++.....+.+......+...+.   ....+... ..++
T Consensus       119 KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li  195 (309)
T COG5273         119 KPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFS---IRHDTSLAICFLI  195 (309)
T ss_pred             cCCCCccchhhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccCChHHHHHHHH
Confidence            9999999999999999999999999999999999999999999877776665554444433221   22222222 1112


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHHhcCcchHhhhhhcC-------------C------------CCCCCchhHHHHHHH
Q 021223          224 IT-FVLNLAFALSILGFLIMHISLVAGNTTTIEAFEKKT-------------S------------PKWRYDLGWKINFEQ  277 (316)
Q Consensus       224 l~-~~~~~~~~~~~~~l~~~h~~li~~n~TT~E~~~~~~-------------~------------~~~~yd~G~~~N~~~  277 (316)
                      .. ..+.+.+.+.+..++.+|.+++..|+||+|..+..+             .            ..+|++.|..+|+..
T Consensus       196 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  275 (309)
T COG5273         196 FGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLST  275 (309)
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccCCCccccccccCcccccee
Confidence            11 234444556667788899999999999999875421             1            124788889999999


Q ss_pred             hcCCCccceeeccccCCCCCCCCCCCceeccCCCCC
Q 021223          278 VFGKNKKYWLIPAYSKDDLEWLPSFQCVEYPTRPDS  313 (316)
Q Consensus       278 vfG~~~~~W~~P~~~~~~~~~~p~~dG~~~~~~~~~  313 (316)
                      ++|.+...|..|.....       .++.+++.|.+.
T Consensus       276 i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  304 (309)
T COG5273         276 IKGSNALYWLTPLHTNY-------CNSYDFSLRSDT  304 (309)
T ss_pred             ecCCCceeeccccccCC-------CCccCcccchhh
Confidence            99999999999943221       477778777654

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.97  E-value=2.8e-32  Score=239.27  Aligned_cols=172  Identities=30%  Similarity=0.496  Sum_probs=108.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccCCCCCCCC-CCCCCcccccCCCCCCCCCCCCCccccccccccccCCCc-cceeccccc
Q 021223           65 VLFLFHSLLVMLVWSYFSVVITDPGGVPPN-WIPNLDEESGGAGQWAGSDNDGVDLGANQSAMLIEPKHQ-GVRFCQKCN  142 (316)
Q Consensus        65 ~~i~~~~l~~~~~~sy~~~~~tdPG~vp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~C~~C~  142 (316)
                      ..+....+.++-.+++..++.+|||.+.+. +....     ++-|                   .|.... ....|+||+
T Consensus       100 ~~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~-----~~yp-------------------YDy~if~k~~kCSTCk  155 (341)
T KOG1312|consen  100 YLILPYLLVIVPLIFFTLTCGSNPGIITKANESLFL-----HVYP-------------------YDYVIFPKNVKCSTCK  155 (341)
T ss_pred             HHHHHHHHHHHHHHHHhhhhcCCCCccchhhhccce-----eccC-------------------ccceeecCCCcccccc
Confidence            333333444555566778999999998742 21111     1111                   112222 237899999


Q ss_pred             ccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----------
Q 021223          143 QFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEI----------  212 (316)
Q Consensus       143 ~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~~~~~~~~~~~~~~~~----------  212 (316)
                      ..||+||+|||.|||||.||||||.|+|||||.+|+|||++||++....+.++++........-.++...          
T Consensus       156 i~KPARSKHCsiCNrCV~rfDHHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrlgfi~ln~~sdl~q~v~ilt~~~g  235 (341)
T KOG1312|consen  156 IRKPARSKHCSICNRCVHRFDHHCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRLGFIVLNVMSDLYQEVYILTLGHG  235 (341)
T ss_pred             CCCccccccchHHHHHHHHhccceEeeecccccchHHHHHHHHHHHHHHHHHHHHHHHheehhhccccchheeeeeeeec
Confidence            9999999999999999999999999999999999999999999999877777766554432221221100          


Q ss_pred             -CCCCcchh-HHHHHH-----HHHHHHHH-HHHHHHHHHHHHHhcCcchHhhhhhc
Q 021223          213 -PESPGNLA-ASFITF-----VLNLAFAL-SILGFLIMHISLVAGNTTTIEAFEKK  260 (316)
Q Consensus       213 -~~~~~~~~-~~~l~~-----~~~~~~~~-~~~~l~~~h~~li~~n~TT~E~~~~~  260 (316)
                       ..+...+. ..++++     +++....+ ++++...+-+|+-++|+||.|+..++
T Consensus       236 ~~ks~~~L~~yl~la~~~~v~~l~~~~~~~~~~~Y~~f~~y~~~t~~~~~~W~~~d  291 (341)
T KOG1312|consen  236 HVKSTVFLIQYLFLAFPRIVFMLGFVVVLSFLGGYLLFVLYLAATNQTTNEWYRGD  291 (341)
T ss_pred             chhhHHHHHHHHHHHhccceeeeehhhhhhHhHHHHHHHHHHHhccCCchhhhccc
Confidence             00000111 111111     11111111 13345567778889999999998764

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.95  E-value=1e-27  Score=231.18  Aligned_cols=140  Identities=28%  Similarity=0.449  Sum_probs=94.4

Q ss_pred             eecccccccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 021223          136 RFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTVSLLPIFIALFTDDEIPES  215 (316)
Q Consensus       136 ~~C~~C~~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  215 (316)
                      ++|.+|.+.||.|++||+.|||||.||||||||++||||.+|||+|+.|++.+...+.+.+....+.    +........
T Consensus       421 ~FC~~clirKp~rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y----~~~~~~~~~  496 (600)
T KOG0509|consen  421 RFCLTCLIRKPLRSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYY----IMNLENAST  496 (600)
T ss_pred             cceeeeeeecCCccchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH----HhhcchhHH
Confidence            7999999999999999999999999999999999999999999999999998776666554443322    222111100


Q ss_pred             CcchhHHHHHHHHHHHH--HH-------------HHHH-HHHHHHHHHhcCcchHhhhhhcC---------CCCCCCchh
Q 021223          216 PGNLAASFITFVLNLAF--AL-------------SILG-FLIMHISLVAGNTTTIEAFEKKT---------SPKWRYDLG  270 (316)
Q Consensus       216 ~~~~~~~~l~~~~~~~~--~~-------------~~~~-l~~~h~~li~~n~TT~E~~~~~~---------~~~~~yd~G  270 (316)
                         ....++..+..+..  .+             .... -..-|...++.+.||+|.++.++         ..++|++.|
T Consensus       497 ---~~~~~l~~~~~~~~~~~~~~~~~~n~~~~~t~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~~~~~~~~~~~~s~g  573 (600)
T KOG0509|consen  497 ---IYVGFLIAVQAFRIPKPVTGNLLGNEDLNPTWGSTSTKCQHYNCACLHLTTNEQINVKRYEHLGIKRGPTRSPFSPG  573 (600)
T ss_pred             ---HHHHHHHHHHHHhCCccceeeeeeccccccccccccccccccceeeecccHHHHHHHHHhhccccccCcCCCCCCch
Confidence               00011111100000  00             0000 11234446789999999986532         346899999


Q ss_pred             HHHHHHHhcCCC
Q 021223          271 WKINFEQVFGKN  282 (316)
Q Consensus       271 ~~~N~~~vfG~~  282 (316)
                      +.+|+.+++-.+
T Consensus       574 ~~~Nl~df~~~~  585 (600)
T KOG0509|consen  574 PIRNLVDFFLCS  585 (600)
T ss_pred             hhhcchheeecc
Confidence            999999987544

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.22  E-value=0.89  Score=38.17  Aligned_cols=56  Identities=27%  Similarity=0.475  Sum_probs=41.7

Q ss_pred             CCccceecccccccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHHHHHHHHHH
Q 021223          131 KHQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTFLETTLVTV  197 (316)
Q Consensus       131 ~~~~~~~C~~C~~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~l~~~~~~~  197 (316)
                      +..+.+.|+.|+.--..+-|||..-|+||-+--|           +-+-.|+++..-..+...+...
T Consensus        58 kp~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~~~~  113 (174)
T PF01529_consen   58 KPPRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFILSL  113 (174)
T ss_pred             CCCcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHHHHH
Confidence            4567889999998889999999999999987655           5566777777655555554433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=90.48  E-value=1.6  Score=40.40  Aligned_cols=42  Identities=24%  Similarity=0.569  Sum_probs=36.5

Q ss_pred             CCccCcccCccccccCccCcccccccccccH-----------HHHHHHHHHHH
Q 021223          148 RCHHCSVCRRCILKMDHHCVWVVNCVGAFNY-----------KYFLLFLFYTF  189 (316)
Q Consensus       148 RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~-----------k~FilFL~~~~  189 (316)
                      +.++|..|+..+...-|||+.=|+||-+.-|           |-+-.|+.+++
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~  164 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLF  164 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHH
Confidence            5889999999999999999999999988766           67888886665

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=87.47  E-value=0.31  Score=27.02  Aligned_cols=21  Identities=19%  Similarity=0.673  Sum_probs=18.1

Q ss_pred             ecccccccCCCCCccCcccCc
Q 021223          137 FCQKCNQFKPPRCHHCSVCRR  157 (316)
Q Consensus       137 ~C~~C~~~kP~RahHC~~C~~  157 (316)
                      +|+.|+..-++.+..|+.||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            688999888899999998874

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=84.62  E-value=0.54  Score=30.85  Aligned_cols=26  Identities=27%  Similarity=0.643  Sum_probs=22.8

Q ss_pred             CccceecccccccCCCCCccCcccCc
Q 021223          132 HQGVRFCQKCNQFKPPRCHHCSVCRR  157 (316)
Q Consensus       132 ~~~~~~C~~C~~~kP~RahHC~~C~~  157 (316)
                      ......|.+|...-|+|+..|+.||.
T Consensus        11 ~~~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         11 VFNKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             hhcccchhcccCCCCccccccccCCC
Confidence            34568999999999999999998875

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=83.27  E-value=3.8  Score=38.22  Aligned_cols=47  Identities=21%  Similarity=0.358  Sum_probs=26.8

Q ss_pred             CccceecccccccCCCCCccCcccCccccccCccCcccccccccccHHHHHHHHHHHH
Q 021223          132 HQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDHHCVWVVNCVGAFNYKYFLLFLFYTF  189 (316)
Q Consensus       132 ~~~~~~C~~C~~~kP~RahHC~~C~~CV~r~DHHCpWl~nCIG~~N~k~FilFL~~~~  189 (316)
                      ..+.+.|+.|+.=-...-|||.-=|+||-+--|           +=.-.|++++....
T Consensus       120 P~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~  166 (309)
T COG5273         120 PPRSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVA  166 (309)
T ss_pred             CCCCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHH
Confidence            345566666666556666666666666665333           44455555554433

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=82.67  E-value=6.8  Score=36.49  Aligned_cols=33  Identities=21%  Similarity=0.424  Sum_probs=24.2

Q ss_pred             CccceecccccccCCCCCccCcccCccccccCc
Q 021223          132 HQGVRFCQKCNQFKPPRCHHCSVCRRCILKMDH  164 (316)
Q Consensus       132 ~~~~~~C~~C~~~kP~RahHC~~C~~CV~r~DH  164 (316)
                      ..+...|+.|+.=--..-|||..-|+||---++
T Consensus       120 PdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~Ny  152 (307)
T KOG1315|consen  120 PDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNY  152 (307)
T ss_pred             CCccccchhhhhhhhccccCCcceeceecccch
Confidence            445667788875556667999999999986554

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=82.10  E-value=0.74  Score=26.19  Aligned_cols=22  Identities=27%  Similarity=0.762  Sum_probs=18.8

Q ss_pred             eecccccccCCCCCccCcccCc
Q 021223          136 RFCQKCNQFKPPRCHHCSVCRR  157 (316)
Q Consensus       136 ~~C~~C~~~kP~RahHC~~C~~  157 (316)
                      ++|..|+..-++.++.|..||.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6799999987888999998874

>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length

Probab=80.64  E-value=0.84  Score=31.03  Aligned_cols=37  Identities=32%  Similarity=0.841  Sum_probs=27.8

Q ss_pred             eecccccccCCCCC-------ccCcccCcccccc-CccCccccccccc
Q 021223          136 RFCQKCNQFKPPRC-------HHCSVCRRCILKM-DHHCVWVVNCVGA  175 (316)
Q Consensus       136 ~~C~~C~~~kP~Ra-------hHC~~C~~CV~r~-DHHCpWl~nCIG~  175 (316)
                      .-|..|+..-|+-+       +-|..|..|+..+ +++||   ||=|.
T Consensus         6 pnCE~C~~dLp~~s~~A~ICSfECTFC~~C~e~~l~~~CP---NCgGe   50 (57)
T PF06906_consen    6 PNCECCDKDLPPDSPEAYICSFECTFCADCAETMLNGVCP---NCGGE   50 (57)
T ss_pred             CCccccCCCCCCCCCcceEEeEeCcccHHHHHHHhcCcCc---CCCCc
Confidence            34666666555543       6789999999999 99999   77664

This family contains a number of conserved cysteine residues and its function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 7e-05
 Identities = 42/288 (14%), Positives = 75/288 (26%), Gaps = 98/288 (34%)

Query: 71  SLLVMLVWSYFSVVITDPGGVPPNWIPNLDEESGGAGQWAGSDNDGVDLGANQSAML--I 128
           + + + V   + V       +   W+ NL            + N    +      +L  I
Sbjct: 164 TWVALDVCLSYKVQCKMDFKI--FWL-NL-----------KNCNSPETVLEMLQKLLYQI 209

Query: 129 EPKHQGVRFCQKCNQFKPPRCHHCSVC------------RRCILKMDHHCVWVVNCVGAF 176
           +P      +  + +     +    S+               C+L + +  V       AF
Sbjct: 210 DPN-----WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--VQNAKAWNAF 262

Query: 177 NYKYFLLFLFYT-------FLETTLVTVSLLPIFIALFTDDEIPESPGNLAASFITFVLN 229
           N    +L    T       FL     T   L       T DE+      L   +    L+
Sbjct: 263 NLSCKILLT--TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS----LLLKY----LD 312

Query: 230 LAF------ALSILGFLIMHISLVAGNTTTIEAF--EKKTSPKWRYDLGWKIN------- 274
                     L+        +S++A      E+      T   W++    K+        
Sbjct: 313 CRPQDLPREVLTTNPR---RLSIIA------ESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 275 -----------FEQ--VFGKNKKYWLIPAYSKDDLE--WL-PSFQCVE 306
                      F++  VF  +     IP      L   W       V 
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAH---IPT---ILLSLIWFDVIKSDVM 405

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	80.54

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=80.54  E-value=0.88  Score=30.04  Aligned_cols=30  Identities=27%  Similarity=0.644  Sum_probs=25.2

Q ss_pred             CccceecccccccCCCCCccCcccCccccc
Q 021223          132 HQGVRFCQKCNQFKPPRCHHCSVCRRCILK  161 (316)
Q Consensus       132 ~~~~~~C~~C~~~kP~RahHC~~C~~CV~r  161 (316)
                      ......|.+|...-|+|+..|+.||.--+|
T Consensus        16 ~~~k~ICrkC~ARnp~~A~~CRKCg~~~LR   45 (56)
T 2ayj_A           16 VFLKKVCRKCGALNPIRATKCRRCHSTNLR   45 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred             HhchhhhccccCcCCcccccccCCCCCCCC
Confidence            456789999999999999999998865443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	87.76

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=87.76  E-value=0.14  Score=32.13  Aligned_cols=26  Identities=27%  Similarity=0.699  Sum_probs=23.0

Q ss_pred             CccceecccccccCCCCCccCcccCc
Q 021223          132 HQGVRFCQKCNQFKPPRCHHCSVCRR  157 (316)
Q Consensus       132 ~~~~~~C~~C~~~kP~RahHC~~C~~  157 (316)
                      ....+.|.+|...-|+|+..|+.|+.
T Consensus        16 ~~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          16 VFLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhhHHHhhccccCCccccccccCCC
Confidence            45678999999999999999998875